MD08G1193400.v1.1

domain in FBox and BRCT domain containing plant proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0000062
Physical Location & Seq
Reverse (-)
24901444 .. 24904311
2868 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1193400.v1.1.491

Sequence Viewer

Length: 1167 bp
ATGGGTTCGAAGTCCAAGCGTGCTTCAAGACTTAAGGATAGGATCAGTGACTTACCGGTTTCAGTTCTTTGTCACATACTTTCCTTTCTTCCAACAAAATATTCTGTGAGGACTAATGTTTTGTCTACAAGATGGAAGAACATGTGGGCCGCTGTTCCCAGTATAGATTTGGACAATGAGGATTTTCCCAACTATCATGGTTCTACGATGTTTGTTGATCGTGTACTTCTCTTCCGTGGCTCATCCGACATTGAAAATTTTCGTCTTGATTGTCACTGTATGGGGGATTTCCCTCGTATTGATGCTTGGATTCGCACAGCCATTATGCGTAACGTTGCTGAACTTGATCTTTGTGTTGAACCACATGAGCAGAATATTTTTGAGTTGCCTAAAAGCCTTTTTATGTGCAAAACACTCAGGGTTTTGAAGTTGATGTCAAGTTTTGTTACCAATGCGCCTACGTTATGGTGCTTACCAAGTCTCAAAAGCCTTTCTGTTGCAGTTAGGTATCCTGATAACGAATTGATAGAAATTTTTTTGTCTCGCTGCCGTGCAGTTGAAGATTTAACTATACATGGAGTTGTTGGAGAACATGAAGTTTGGAATTTCAATATCTCTGCACTTGGACCGAAGATCTTAAGAATGGATTTGGAAACTGCCCCTGATTTAGGAGATATTTTCTTGTCAAATTGTGTATTGGAGAATGCAAAATCCCTGGTCAAAGCCACTATTCATTTCGATGAACATTTTGCTTGTGAATGTCCTGTCCATGCTAGCCGCGTAACTACTCTTCTGCTACAAATTTGTAACGTTAAATGTTTGTCTCTTGCGGCGCATTGTTTGGAGGTCTTCAGTAGTTGTGGTTTTGAATCTGAACTGGTACGAGAATACCCACATTTTCAATTCAAGTTGCCAAAGGTTCGATGGAATCCGCCAGATTTTGTGCCTAGTTGTTTGCTGACGCACCTCAAGACTATCTGTATAACAAGATTAATGGGAAGGCCGCATGAGATGGAAGTGGCAAAGTTTTTGCTAGAAAATGGAAAGGTTTTGAAAAGAATGACAATACATACCTGTGGTGGTCTTTTGTGTACAAGGAAGGAATTATACAAGAAGTTTTTGATGTTTCATCGGGGTTCGAACAAATGCGAGGTTGAATTTCCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

389

Amino Acids

44.4

Weight (kDa)

8.22

Isoelectric Point (pI)

42.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 95 - 191 1.8e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 100 - 198 4.4e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 312 - 356 2.1e-17 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 125
AccII CGCG 1 cut(s) 780
AciI CCGC 5 cut(s) 150, 778, 830, 932, 1004
AclI AACGTT 2 cut(s) 333, 810
AclWI GGATC 1 cut(s) 50
AcsI RAATTY 5 cut(s) 256, 531, 604, 801, 1157
AcuI CTGAAG 1 cut(s) 835
AfaI GTAC 3 cut(s) 225, 882, 1093
AfiI CCNNNNNNNGG 1 cut(s) 668
AflII CTTAAG 2 cut(s) 32, 637
AflIII ACRYGT 1 cut(s) 141
AgeI ACCGGT 1 cut(s) 55
AjnI CCWGG 1 cut(s) 714
AjuI GAANNNNNNNTTGG 2 cut(s) 85, 117
Alw26I GTCTC 3 cut(s) 485, 546, 828
AlwI GGATC 1 cut(s) 50
AoxI GGCC 2 cut(s) 147, 1001
ApeKI GCWGC 1 cut(s) 546
ApoI RAATTY 5 cut(s) 256, 531, 604, 801, 1157
ArsI GACNNNNNNTTYG 2 cut(s) 103, 135
AseI ATTAAT 1 cut(s) 992
AsiGI ACCGGT 1 cut(s) 55
Asp700I GAANNNNTTC 1 cut(s) 258
AspLEI GCGC 2 cut(s) 457, 835
AspS9I GGNCC 2 cut(s) 147, 626
AsuII TTCGAA 2 cut(s) 8, 1139
AsuNHI GCTAGC 1 cut(s) 773
AvaII GGWCC 1 cut(s) 626
BarI GAAGNNNNNNTAC 4 cut(s) 774, 806, 1091, 1123
BbsI GAAGAC 1 cut(s) 841
BbvI GCAGC 1 cut(s) 533
BccI CCATC 3 cut(s) 126, 918, 1006
BceAI ACGGC 1 cut(s) 534
BciT130I CCWGG 1 cut(s) 716
BciVI GTATCC 1 cut(s) 519
BcoDI GTCTC 3 cut(s) 485, 546, 828
BfaI CTAG 3 cut(s) 774, 948, 1034
BfrI CTTAAG 2 cut(s) 32, 637
BfuI GTATCC 1 cut(s) 519
BglII AGATCT 1 cut(s) 633
BisI GCNGC 5 cut(s) 150, 547, 778, 831, 1004
BlsI GCNGC 5 cut(s) 151, 548, 779, 832, 1005
Bme1390I CCNGG 1 cut(s) 716
Bme18I GGWCC 1 cut(s) 626
BmgT120I GGNCC 2 cut(s) 147, 626
BmrFI CCNGG 1 cut(s) 716
BmrI ACTGGG 1 cut(s) 153
BmsI GCATC 1 cut(s) 292
BmtI GCTAGC 1 cut(s) 777
BmuI ACTGGG 1 cut(s) 153
BpiI GAAGAC 1 cut(s) 841
Bpu14I TTCGAA 2 cut(s) 8, 1139
BpuEI CTTGAG 1 cut(s) 953
BsaJI CCNNGG 2 cut(s) 235, 714
BsaWI WCCGGW 1 cut(s) 55
Bsc4I CCNNNNNNNGG 1 cut(s) 668
Bse118I RCCGGY 1 cut(s) 55
Bse1I ACTGG 2 cut(s) 159, 882
BseBI CCWGG 1 cut(s) 716
BseDI CCNNGG 2 cut(s) 235, 714
BseGI GGATG 1 cut(s) 242
BseLI CCNNNNNNNGG 1 cut(s) 668
BseMII CTCAG 1 cut(s) 430
BseNI ACTGG 2 cut(s) 159, 882
BseXI GCAGC 1 cut(s) 533
BsgI GTGCAG 2 cut(s) 573, 603
Bsh1236I CGCG 1 cut(s) 780
BshFI GGCC 2 cut(s) 149, 1003
BshTI ACCGGT 1 cut(s) 55
BsiSI CCGG 1 cut(s) 56
BslI CCNNNNNNNGG 1 cut(s) 668
BsmAI GTCTC 3 cut(s) 485, 546, 828
BsmI GAATGC 1 cut(s) 709
BsnI GGCC 2 cut(s) 149, 1003
Bsp119I TTCGAA 2 cut(s) 8, 1139
Bsp1407I TGTACA 1 cut(s) 1091
Bsp143I GATC 4 cut(s) 42, 217, 346, 633
BspACI CCGC 5 cut(s) 150, 778, 830, 932, 1004
BspANI GGCC 2 cut(s) 149, 1003
BspCNI CTCAG 1 cut(s) 429
BspFNI CGCG 1 cut(s) 780
BspOI GCTAGC 1 cut(s) 777
BspPI GGATC 1 cut(s) 50
BspT104I TTCGAA 2 cut(s) 8, 1139
BspTI CTTAAG 2 cut(s) 32, 637
BsrFI RCCGGY 1 cut(s) 55
BsrGI TGTACA 1 cut(s) 1091
BsrI ACTGG 2 cut(s) 159, 882
BssAI RCCGGY 1 cut(s) 55
BssECI CCNNGG 2 cut(s) 235, 714
BssMI GATC 4 cut(s) 42, 217, 346, 633
Bst2UI CCWGG 1 cut(s) 716
Bst4CI ACNGT 1 cut(s) 278
Bst6I CTCTTC 2 cut(s) 236, 795
BstAFI CTTAAG 2 cut(s) 32, 637
BstAUI TGTACA 1 cut(s) 1091
BstBI TTCGAA 2 cut(s) 8, 1139
BstC8I GCNNGC 2 cut(s) 21, 775
BstDEI CTNAG 1 cut(s) 416
BstDSI CCRYGG 1 cut(s) 235
BstENI CCTNNNNNAGG 1 cut(s) 666
BstF5I GGATG 1 cut(s) 242
BstFNI CGCG 1 cut(s) 780
BstHHI GCGC 2 cut(s) 457, 835
BstKTI GATC 4 cut(s) 45, 220, 349, 636
BstMAI GTCTC 3 cut(s) 485, 546, 828
BstMBI GATC 4 cut(s) 42, 217, 346, 633
BstNI CCWGG 1 cut(s) 716
BstNSI RCATGY 1 cut(s) 145
BstSCI CCNGG 1 cut(s) 714
BstUI CGCG 1 cut(s) 780
BstV1I GCAGC 1 cut(s) 533
BstV2I GAAGAC 1 cut(s) 841
BstX2I RGATCY 1 cut(s) 633
BstYI RGATCY 1 cut(s) 633
BsuI GTATCC 1 cut(s) 519
BsuRI GGCC 2 cut(s) 149, 1003
BtgI CCRYGG 1 cut(s) 235
BtsCI GGATG 1 cut(s) 242
BtsIMutI CAGTG 2 cut(s) 52, 274
Cac8I GCNNGC 2 cut(s) 21, 775
CfoI GCGC 2 cut(s) 457, 835
Cfr10I RCCGGY 1 cut(s) 55
Cfr13I GGNCC 2 cut(s) 147, 626
CseI GACGC 1 cut(s) 970
Csp6I GTAC 3 cut(s) 224, 881, 1092
CspAI ACCGGT 1 cut(s) 55
CviAII CATG 7 cut(s) 142, 197, 365, 575, 593, 770, 1007
CviJI RGCY 8 cut(s) 149, 240, 320, 396, 489, 725, 777, 1003
CviKI_1 RGCY 8 cut(s) 149, 240, 320, 396, 489, 725, 777, 1003
CviQI GTAC 3 cut(s) 224, 881, 1092
DdeI CTNAG 1 cut(s) 416
DpnI GATC 4 cut(s) 44, 219, 348, 635
DpnII GATC 4 cut(s) 42, 217, 346, 633
Eam1104I CTCTTC 2 cut(s) 236, 795
EarI CTCTTC 2 cut(s) 236, 795
EciI GGCGGA 1 cut(s) 921
Eco47I GGWCC 1 cut(s) 626
Eco57I CTGAAG 1 cut(s) 835
EcoNI CCTNNNNNAGG 1 cut(s) 666
EcoRII CCWGG 1 cut(s) 714
FaeI CATG 7 cut(s) 145, 200, 368, 578, 596, 773, 1010
FatI CATG 7 cut(s) 141, 196, 364, 574, 592, 769, 1006
FblI GTMKAC 1 cut(s) 125
Fnu4HI GCNGC 5 cut(s) 150, 547, 778, 831, 1004
FokI GGATG 1 cut(s) 229
Fsp4HI GCNGC 5 cut(s) 150, 547, 778, 831, 1004
FspBI CTAG 3 cut(s) 774, 948, 1034
GlaI GCGC 2 cut(s) 456, 834
GluI GCNGC 5 cut(s) 150, 547, 778, 831, 1004
HaeIII GGCC 2 cut(s) 149, 1003
HapII CCGG 1 cut(s) 56
HgaI GACGC 1 cut(s) 970
HhaI GCGC 2 cut(s) 457, 835
Hin1II CATG 7 cut(s) 145, 200, 368, 578, 596, 773, 1010
Hin6I GCGC 2 cut(s) 455, 833
HinP1I GCGC 2 cut(s) 455, 833
HinfI GANTC 3 cut(s) 310, 869, 928
HpaII CCGG 1 cut(s) 56
Hpy166II GTNNAC 3 cut(s) 126, 224, 1092
Hpy188I TCNGA 2 cut(s) 247, 874
Hpy188III TCNNGA 4 cut(s) 27, 266, 512, 970
Hpy8I GTNNAC 3 cut(s) 126, 224, 1092
HpyAV CCTTC 2 cut(s) 993, 1093
HpyCH4III ACNGT 1 cut(s) 278
HpyCH4IV ACGT 3 cut(s) 333, 461, 810
HpyCH4V TGCA 5 cut(s) 408, 500, 554, 620, 707
HpyF3I CTNAG 1 cut(s) 416
HpySE526I ACGT 3 cut(s) 333, 461, 810
Hsp92II CATG 7 cut(s) 145, 200, 368, 578, 596, 773, 1010
HspAI GCGC 2 cut(s) 455, 833
Kzo9I GATC 4 cut(s) 42, 217, 346, 633
Lsp1109I GCAGC 1 cut(s) 533
LweI GCATC 1 cut(s) 292
MaeI CTAG 3 cut(s) 774, 948, 1034
MaeII ACGT 3 cut(s) 333, 461, 810
MaeIII GTNAC 7 cut(s) 47, 71, 272, 329, 445, 781, 806
MalI GATC 4 cut(s) 44, 219, 348, 635
MboI GATC 4 cut(s) 42, 217, 346, 633
MboII GAAGA 7 cut(s) 80, 148, 223, 572, 643, 782, 841
MflI RGATCY 1 cut(s) 633
MluCI AATT 9 cut(s) 256, 521, 531, 604, 688, 801, 902, 1103, 1157
MmeI TCCRAC 3 cut(s) 116, 270, 565
MnlI CCTC 6 cut(s) 102, 172, 303, 838, 977, 1144
MroXI GAANNNNTTC 1 cut(s) 258
MseI TTAA 5 cut(s) 33, 566, 638, 813, 992
MslI CAYNNNNRTG 2 cut(s) 738, 1074
MspA1I CMGCKG 1 cut(s) 152
MspCI CTTAAG 2 cut(s) 32, 637
MspI CCGG 1 cut(s) 56
MspR9I CCNGG 1 cut(s) 716
Mva1269I GAATGC 1 cut(s) 709
MvaI CCWGG 1 cut(s) 716
MvnI CGCG 1 cut(s) 780
NdeII GATC 4 cut(s) 42, 217, 346, 633
NheI GCTAGC 1 cut(s) 773
NlaIII CATG 7 cut(s) 145, 200, 368, 578, 596, 773, 1010
NmuCI GTSAC 3 cut(s) 47, 71, 272
NspI RCATGY 1 cut(s) 145
NspV TTCGAA 2 cut(s) 8, 1139
PciI ACATGT 1 cut(s) 141
PctI GAATGC 1 cut(s) 709
PdmI GAANNNNTTC 1 cut(s) 258
PfeI GAWTC 3 cut(s) 310, 869, 928
PinAI ACCGGT 1 cut(s) 55
PkrI GCNGC 5 cut(s) 151, 548, 779, 832, 1005
PscI ACATGT 1 cut(s) 141
PshBI ATTAAT 1 cut(s) 992
Psp1406I AACGTT 2 cut(s) 333, 810
Psp6I CCWGG 1 cut(s) 714
PspGI CCWGG 1 cut(s) 714
PspPI GGNCC 2 cut(s) 147, 626
PsuI RGATCY 1 cut(s) 633
RsaI GTAC 3 cut(s) 225, 882, 1093
RsaNI GTAC 3 cut(s) 224, 881, 1092
RseI CAYNNNNRTG 2 cut(s) 738, 1074
SaqAI TTAA 5 cut(s) 33, 566, 638, 813, 992
SatI GCNGC 5 cut(s) 150, 547, 778, 831, 1004
Sau3AI GATC 4 cut(s) 42, 217, 346, 633
Sau96I GGNCC 2 cut(s) 147, 626
ScrFI CCNGG 1 cut(s) 716
SfaNI GCATC 1 cut(s) 292
SfuI TTCGAA 2 cut(s) 8, 1139
SinI GGWCC 1 cut(s) 626
SmiMI CAYNNNNRTG 2 cut(s) 738, 1074
SmlI CTYRAG 3 cut(s) 32, 637, 968
SmoI CTYRAG 3 cut(s) 32, 637, 968
Sse9I AATT 9 cut(s) 256, 521, 531, 604, 688, 801, 902, 1103, 1157
SsiI CCGC 5 cut(s) 150, 778, 830, 932, 1004
SspI AATATT 2 cut(s) 101, 376
SspMI CTAG 3 cut(s) 774, 948, 1034
StyD4I CCNGG 1 cut(s) 714
TaaI ACNGT 1 cut(s) 278
TaiI ACGT 3 cut(s) 336, 464, 813
TaqI TCGA 4 cut(s) 8, 738, 922, 1139
TaqII GACCGA 1 cut(s) 643
TasI AATT 9 cut(s) 256, 521, 531, 604, 688, 801, 902, 1103, 1157
TatI WGTACW 2 cut(s) 223, 1091
TauI GCSGC 4 cut(s) 152, 780, 833, 1006
TfiI GAWTC 3 cut(s) 310, 869, 928
Tru1I TTAA 5 cut(s) 33, 566, 638, 813, 992
Tru9I TTAA 5 cut(s) 33, 566, 638, 813, 992
TscAI CASTG 2 cut(s) 52, 281
TseFI GTSAC 3 cut(s) 47, 71, 272
TseI GCWGC 1 cut(s) 546
Tsp45I GTSAC 3 cut(s) 47, 71, 272
TspDTI ATGAA 4 cut(s) 609, 722, 756, 1118
TspGWI ACGGA 1 cut(s) 224
TspRI CASTG 2 cut(s) 52, 281
Vha464I CTTAAG 2 cut(s) 32, 637
VpaK11BI GGWCC 1 cut(s) 626
VspI ATTAAT 1 cut(s) 992
XagI CCTNNNNNAGG 1 cut(s) 666
XapI RAATTY 5 cut(s) 256, 531, 604, 801, 1157
XceI RCATGY 1 cut(s) 145
XcmI CCANNNNNNNNNTGG 2 cut(s) 166, 921
XmiI GTMKAC 1 cut(s) 125
XmnI GAANNNNTTC 1 cut(s) 258
XspI CTAG 3 cut(s) 774, 948, 1034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.