Rmu_sc0004142.1_g000028

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004142.1
OG0000062
Physical Location & Seq
Forward (+)
131742 .. 133187
1446 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004142.1_g000028.1.cds

Sequence Viewer

Length: 1446 bp
atggattcgaaatcaaaacgtagaaaaagaaccgaagataggatcagccaattaccgcacgatattcgtgttcatatactatcctatattccgacggtgtattccgttcgaaccacggttttgtctaaaagatggaacaacttatggaccttcgtccccaccctagacttggaccaacaagattattccaaagaacacggtcatcgaactcggaatagttttgataaatttgccaagtttgttgatggtgcactttcattacacaactcatcaacgatcagaaagtttcgtcttcatattcataccaattctcattatcatctccaagagacagatttttctcgcattcgaaattggatatccactgccatgaggtatgaggtttctgaacttgaactttctttttcccctaatcagcgcctcggagagcagatagagttgaaactgcctcgaagagttttctcgtgcaaaactctggaggttttgaaggtagattcaaattgtattacctatcctcctactaatccaggttgttttcctagcctcaagttcgccgatattaaagcaacaaatagagataattcctcaatgagaaaacttttttgcaactgcccagtacttgaagagttgcgtattgatgcaaatcgctacttttatgataccgaattgagcatctctgcacctgaattgcgaactttaaaaacaagcatttctgtagatatttctatcaatgccccaaagcttgaaaaccttgttgtctatagcagtggttttacaaaatatatcttgcagaatgcaaaatgcctagtcaaagccaacataaagcacataggttatattaaaaaaaatttaagtccagaccttctgaaccgtgcaattgctttacttgcaggagtttccagtgttgagtatttgcatatgtcaggtcctaatttagtggcatgttcactgccaaattttagtaatttgaagcaattgaaactcattctttttggttgctcttatgtggaatatttaatggagttgctcaagcgatcacctaagcttgaagatctggtcttagatatcgatatccgctcatggtatgatgaacaatatgtcgaaggatacgagcccttcaaaccaccagagattgtgcctatttgtgtggtgtcacaccttaagactgtttccattactcacatcactggacatgatgatcagttgaatgtggtaaagtatttgttaaagtatggtcaagttctgaggaatatgactatattcacctgtggtactcttcttttcaagactcgtcatatcacagaagagaagttccagaggaaaattttgaagtatcacaagagttcgaagacttgtgaggttgaagttaagtttgaaaataaaggggtagtttcattgaattgttctgactgtacaagtatcatcctctatgtagatcgaagataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

481

Amino Acids

55.69

Weight (kDa)

9.2

Isoelectric Point (pI)

47.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1077
AciI CCGC 2 cut(s) 56, 1075
AclWI GGATC 1 cut(s) 50
AcsI RAATTY 4 cut(s) 227, 847, 955, 1323
AfaI GTAC 3 cut(s) 618, 1273, 1414
AfiI CCNNNNNNNGG 2 cut(s) 39, 169
AflII CTTAAG 1 cut(s) 1160
AjnI CCWGG 1 cut(s) 526
AluBI AGCT 2 cut(s) 742, 1045
AluI AGCT 2 cut(s) 742, 1045
Alw21I GWGCWC 1 cut(s) 253
Alw26I GTCTC 1 cut(s) 323
Alw44I GTGCAC 1 cut(s) 249
AlwI GGATC 1 cut(s) 50
ApaLI GTGCAC 1 cut(s) 249
ApoI RAATTY 4 cut(s) 227, 847, 955, 1323
AspLEI GCGC 1 cut(s) 420
AspS9I GGNCC 3 cut(s) 147, 172, 926
AsuHPI GGTGA 2 cut(s) 1029, 1255
AsuII TTCGAA 4 cut(s) 8, 109, 349, 1346
AvaII GGWCC 3 cut(s) 147, 172, 926
BaeGI GKGCMC 1 cut(s) 253
BanII GRGCYC 1 cut(s) 1116
BauI CACGAG 1 cut(s) 463
BbsI GAAGAC 2 cut(s) 284, 1355
Bbv12I GWGCWC 1 cut(s) 253
BccI CCATC 2 cut(s) 126, 239
BcgI CGANNNNNNTGC 2 cut(s) 47, 81
BciT130I CCWGG 1 cut(s) 528
BciVI GTATCC 1 cut(s) 1100
BclI TGATCA 1 cut(s) 1198
BcoDI GTCTC 1 cut(s) 323
BfaI CTAG 3 cut(s) 164, 540, 806
BfmI CTRYAG 2 cut(s) 714, 760
BfoI RGCGCY 1 cut(s) 421
BfrI CTTAAG 1 cut(s) 1160
BfuI GTATCC 1 cut(s) 1100
BglII AGATCT 1 cut(s) 1051
BmcAI AGTACT 1 cut(s) 618
Bme1390I CCNGG 1 cut(s) 528
Bme18I GGWCC 3 cut(s) 147, 172, 926
BmgT120I GGNCC 3 cut(s) 147, 172, 926
BmrFI CCNGG 1 cut(s) 528
BmrI ACTGGG 1 cut(s) 608
BmsI GCATC 2 cut(s) 628, 681
BmuI ACTGGG 1 cut(s) 608
BoxI GACNNNNGTC 1 cut(s) 152
BpiI GAAGAC 2 cut(s) 284, 1355
BpmI CTGGAG 1 cut(s) 497
Bpu10I CCTNAGC 1 cut(s) 1041
Bpu14I TTCGAA 4 cut(s) 8, 109, 349, 1346
BpuEI CTTGAG 2 cut(s) 530, 1013
Bsa29I ATCGAT 1 cut(s) 1068
BsaBI GATNNNNATC 1 cut(s) 642
BsaJI CCNNGG 2 cut(s) 114, 421
BsaXI ACNNNNNCTCC 2 cut(s) 499, 529
Bsc4I CCNNNNNNNGG 2 cut(s) 39, 169
Bse1I ACTGG 3 cut(s) 614, 900, 1192
Bse8I GATNNNNATC 1 cut(s) 642
BseBI CCWGG 1 cut(s) 528
BseCI ATCGAT 1 cut(s) 1068
BseDI CCNNGG 2 cut(s) 114, 421
BseGI GGATG 1 cut(s) 1422
BseJI GATNNNNATC 1 cut(s) 642
BseLI CCNNNNNNNGG 2 cut(s) 39, 169
BseMII CTCAG 1 cut(s) 1235
BseNI ACTGG 3 cut(s) 614, 900, 1192
BseSI GKGCMC 1 cut(s) 253
BsgI GTGCAG 1 cut(s) 663
BshVI ATCGAT 1 cut(s) 1068
BsiHKAI GWGCWC 1 cut(s) 253
BslFI GGGAC 1 cut(s) 140
BslI CCNNNNNNNGG 2 cut(s) 39, 169
BsmAI GTCTC 1 cut(s) 323
BsmFI GGGAC 1 cut(s) 140
BsmI GAATGC 2 cut(s) 345, 799
Bsp119I TTCGAA 4 cut(s) 8, 109, 349, 1346
Bsp1286I GDGCHC 2 cut(s) 253, 1116
Bsp1407I TGTACA 1 cut(s) 1412
Bsp143I GATC 6 cut(s) 42, 276, 1034, 1051, 1198, 1435
BspACI CCGC 2 cut(s) 56, 1075
BspCNI CTCAG 1 cut(s) 1236
BspDI ATCGAT 1 cut(s) 1068
BspPI GGATC 1 cut(s) 50
BspT104I TTCGAA 4 cut(s) 8, 109, 349, 1346
BspTI CTTAAG 1 cut(s) 1160
BsrBI CCGCTC 1 cut(s) 1077
BsrGI TGTACA 1 cut(s) 1412
BsrI ACTGG 3 cut(s) 614, 900, 1192
BssECI CCNNGG 2 cut(s) 114, 421
BssMI GATC 6 cut(s) 42, 276, 1034, 1051, 1198, 1435
BssSI CACGAG 1 cut(s) 463
Bst2BI CACGAG 1 cut(s) 463
Bst2UI CCWGG 1 cut(s) 528
Bst4CI ACNGT 6 cut(s) 97, 118, 200, 872, 1168, 1412
Bst6I CTCTTC 4 cut(s) 448, 618, 1281, 1299
BstAFI CTTAAG 1 cut(s) 1160
BstAUI TGTACA 1 cut(s) 1412
BstBI TTCGAA 4 cut(s) 8, 109, 349, 1346
BstDEI CTNAG 3 cut(s) 1041, 1060, 1244
BstDSI CCRYGG 1 cut(s) 114
BstF5I GGATG 1 cut(s) 1422
BstH2I RGCGCY 1 cut(s) 421
BstHHI GCGC 1 cut(s) 420
BstKTI GATC 6 cut(s) 45, 279, 1037, 1054, 1201, 1438
BstMAI GTCTC 1 cut(s) 323
BstMBI GATC 6 cut(s) 42, 276, 1034, 1051, 1198, 1435
BstMWI GCNNNNNNNGC 1 cut(s) 887
BstNI CCWGG 1 cut(s) 528
BstNSI RCATGY 1 cut(s) 945
BstPAI GACNNNNGTC 1 cut(s) 152
BstSCI CCNGG 1 cut(s) 526
BstSFI CTRYAG 2 cut(s) 714, 760
BstSLI GKGCMC 1 cut(s) 253
BstV2I GAAGAC 2 cut(s) 284, 1355
BstX2I RGATCY 1 cut(s) 1051
BstYI RGATCY 1 cut(s) 1051
Bsu15I ATCGAT 1 cut(s) 1068
BsuI GTATCC 1 cut(s) 1100
BsuTUI ATCGAT 1 cut(s) 1068
BtgI CCRYGG 1 cut(s) 114
BtsCI GGATG 1 cut(s) 1422
BtsI GCAGTG 3 cut(s) 363, 772, 947
BtsIMutI CAGTG 5 cut(s) 363, 772, 907, 947, 1185
CfoI GCGC 1 cut(s) 420
Cfr13I GGNCC 3 cut(s) 147, 172, 926
ClaI ATCGAT 1 cut(s) 1068
Csp6I GTAC 3 cut(s) 617, 1272, 1413
CviAII CATG 4 cut(s) 370, 942, 1080, 1193
CviJI RGCY 6 cut(s) 48, 543, 742, 815, 1045, 1114
CviKI_1 RGCY 6 cut(s) 48, 543, 742, 815, 1045, 1114
CviQI GTAC 3 cut(s) 617, 1272, 1413
DdeI CTNAG 3 cut(s) 1041, 1060, 1244
DpnI GATC 6 cut(s) 44, 278, 1036, 1053, 1200, 1437
DpnII GATC 6 cut(s) 42, 276, 1034, 1051, 1198, 1435
DraI TTTAAA 1 cut(s) 699
Eam1104I CTCTTC 4 cut(s) 448, 618, 1281, 1299
EarI CTCTTC 4 cut(s) 448, 618, 1281, 1299
Eco24I GRGCYC 1 cut(s) 1116
Eco32I GATATC 3 cut(s) 360, 1066, 1072
Eco47I GGWCC 3 cut(s) 147, 172, 926
EcoO109I RGGNCCY 1 cut(s) 926
EcoRII CCWGG 1 cut(s) 526
EcoRV GATATC 3 cut(s) 360, 1066, 1072
EcoT38I GRGCYC 1 cut(s) 1116
FaeI CATG 4 cut(s) 373, 945, 1083, 1196
FaqI GGGAC 1 cut(s) 140
FatI CATG 4 cut(s) 369, 941, 1079, 1192
FauNDI CATATG 1 cut(s) 918
FbaI TGATCA 1 cut(s) 1198
FokI GGATG 1 cut(s) 1409
FriOI GRGCYC 1 cut(s) 1116
FspBI CTAG 3 cut(s) 164, 540, 806
GlaI GCGC 1 cut(s) 419
GsuI CTGGAG 1 cut(s) 497
HaeII RGCGCY 1 cut(s) 421
HhaI GCGC 1 cut(s) 420
Hin1II CATG 4 cut(s) 373, 945, 1083, 1196
Hin6I GCGC 1 cut(s) 418
HinP1I GCGC 1 cut(s) 418
HindIII AAGCTT 2 cut(s) 740, 1043
HinfI GANTC 3 cut(s) 5, 494, 1288
HphI GGTGA 2 cut(s) 1029, 1255
Hpy166II GTNNAC 2 cut(s) 251, 947
Hpy188I TCNGA 8 cut(s) 93, 213, 281, 388, 425, 867, 1245, 1408
Hpy188III TCNNGA 4 cut(s) 476, 857, 1285, 1315
Hpy8I GTNNAC 2 cut(s) 251, 947
Hpy99I CGWCG 1 cut(s) 97
HpyAV CCTTC 5 cut(s) 160, 481, 872, 1097, 1126
HpyCH4III ACNGT 6 cut(s) 97, 118, 200, 872, 1168, 1412
HpyCH4IV ACGT 1 cut(s) 19
HpyF10VI GCNNNNNNNGC 1 cut(s) 887
HpyF3I CTNAG 3 cut(s) 1041, 1060, 1244
HpySE526I ACGT 1 cut(s) 19
Hsp92II CATG 4 cut(s) 373, 945, 1083, 1196
HspAI GCGC 1 cut(s) 418
Ksp22I TGATCA 1 cut(s) 1198
Kzo9I GATC 6 cut(s) 42, 276, 1034, 1051, 1198, 1435
LweI GCATC 2 cut(s) 628, 681
MaeI CTAG 3 cut(s) 164, 540, 806
MaeII ACGT 1 cut(s) 19
MaeIII GTNAC 1 cut(s) 1152
MalI GATC 6 cut(s) 44, 278, 1036, 1053, 1200, 1437
MbiI CCGCTC 1 cut(s) 1077
MboI GATC 6 cut(s) 42, 276, 1034, 1051, 1198, 1435
MboII GAAGA 8 cut(s) 47, 284, 465, 635, 1061, 1268, 1316, 1360
MfeI CAATTG 2 cut(s) 876, 974
MflI RGATCY 1 cut(s) 1051
MhlI GDGCHC 2 cut(s) 253, 1116
MlyI GAGTC 1 cut(s) 1282
MmeI TCCRAC 1 cut(s) 116
MseI TTAA 8 cut(s) 561, 698, 840, 851, 1016, 1161, 1226, 1368
MslI CAYNNNNRTG 1 cut(s) 368
MspCI CTTAAG 1 cut(s) 1160
MspR9I CCNGG 1 cut(s) 528
MunI CAATTG 2 cut(s) 876, 974
Mva1269I GAATGC 2 cut(s) 345, 799
MvaI CCWGG 1 cut(s) 528
MwoI GCNNNNNNNGC 1 cut(s) 887
NdeI CATATG 1 cut(s) 918
NdeII GATC 6 cut(s) 42, 276, 1034, 1051, 1198, 1435
NlaIII CATG 4 cut(s) 373, 945, 1083, 1196
NmuCI GTSAC 1 cut(s) 1152
NspI RCATGY 1 cut(s) 945
NspV TTCGAA 4 cut(s) 8, 109, 349, 1346
PcsI WCGNNNNNNNCGW 1 cut(s) 1107
PctI GAATGC 2 cut(s) 345, 799
PfeI GAWTC 2 cut(s) 5, 494
PleI GAGTC 1 cut(s) 1282
PpsI GAGTC 1 cut(s) 1282
PpuMI RGGWCCY 1 cut(s) 926
PshAI GACNNNNGTC 1 cut(s) 152
Psp5II RGGWCCY 1 cut(s) 926
Psp6I CCWGG 1 cut(s) 526
PspGI CCWGG 1 cut(s) 526
PspPI GGNCC 3 cut(s) 147, 172, 926
PspPPI RGGWCCY 1 cut(s) 926
PsuI RGATCY 1 cut(s) 1051
RsaI GTAC 3 cut(s) 618, 1273, 1414
RsaNI GTAC 3 cut(s) 617, 1272, 1413
RseI CAYNNNNRTG 1 cut(s) 368
SaqAI TTAA 8 cut(s) 561, 698, 840, 851, 1016, 1161, 1226, 1368
Sau3AI GATC 6 cut(s) 42, 276, 1034, 1051, 1198, 1435
Sau96I GGNCC 3 cut(s) 147, 172, 926
ScaI AGTACT 1 cut(s) 618
SchI GAGTC 1 cut(s) 1282
ScrFI CCNGG 1 cut(s) 528
SduI GDGCHC 2 cut(s) 253, 1116
SfaNI GCATC 2 cut(s) 628, 681
SfcI CTRYAG 2 cut(s) 714, 760
SfuI TTCGAA 4 cut(s) 8, 109, 349, 1346
SinI GGWCC 3 cut(s) 147, 172, 926
SmiMI CAYNNNNRTG 1 cut(s) 368
SmlI CTYRAG 3 cut(s) 545, 1028, 1160
SmoI CTYRAG 3 cut(s) 545, 1028, 1160
SsiI CCGC 2 cut(s) 56, 1075
SspI AATATT 1 cut(s) 1013
SspMI CTAG 3 cut(s) 164, 540, 806
StyD4I CCNGG 1 cut(s) 526
TaaI ACNGT 6 cut(s) 97, 118, 200, 872, 1168, 1412
TaiI ACGT 1 cut(s) 22
TaqI TCGA 9 cut(s) 8, 109, 205, 349, 451, 1068, 1101, 1346, 1438
TatI WGTACW 2 cut(s) 616, 1412
TfiI GAWTC 2 cut(s) 5, 494
Tru1I TTAA 8 cut(s) 561, 698, 840, 851, 1016, 1161, 1226, 1368
Tru9I TTAA 8 cut(s) 561, 698, 840, 851, 1016, 1161, 1226, 1368
TscAI CASTG 5 cut(s) 370, 772, 907, 954, 1192
TseFI GTSAC 1 cut(s) 1152
Tsp45I GTSAC 1 cut(s) 1152
TspDTI ATGAA 6 cut(s) 62, 246, 284, 290, 1104, 1383
TspGWI ACGGA 1 cut(s) 94
TspRI CASTG 5 cut(s) 370, 772, 907, 954, 1192
Vha464I CTTAAG 1 cut(s) 1160
VneI GTGCAC 1 cut(s) 249
VpaK11BI GGWCC 3 cut(s) 147, 172, 926
XapI RAATTY 4 cut(s) 227, 847, 955, 1323
XceI RCATGY 1 cut(s) 945
XcmI CCANNNNNNNNNTGG 1 cut(s) 166
XspI CTAG 3 cut(s) 164, 540, 806
ZrmI AGTACT 1 cut(s) 618
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.