FvH4_3g17190

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000062
Physical Location & Seq
Forward (+)
10880393 .. 10883353
2961 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17190.t1

Sequence Viewer

Length: 1473 bp
ATGTCTCGGCGGCTGTTGTACTCAGATAAGTATCCCTCTTATTCGCTGAAAATAATCCGACCGTTCAGGGGTGAGGATAGGATCACTCAGTTACCGGATTTTGTTCTTGGTCACATACTTTCCTTTCTTCCATCAACCAAAAGTGTTGTCAGAACGAGCATTCTGTCTAAAAGGTGGAAGAACATATGGACCTCTGTTCCCAACCTATACTTCCGTGATGAAGAGTTCGACCGTGATGATGATTTCATAGCTTTCGTTGATCGTGTGCTTTCTAGTCGTGATCCATCATCCACCATTCAAAAGTTCCACCTTCATTTCAATCATTGTGCTCCTGAGGATTTCTATCGCGTCGAGAATTGGATTAGCACTGCAGCAAGGTGTAACGTAGTGGAACTAGTTCTTTCTGTCCGTTCAAGTGGAAACATGATGTTTCTGTTGCCTGAAAGCCTTATGACTTGTAAATCACTTGAGGTTTTAAGGCTAATGTCAGTGTTTGTCATGGATAATGGGGATGCATTAGGATGTTTCCCAAGTCTGAAGCGCTTCCATTGCCACTTTGGAGCTGAAAACTATGGCGGTCTATACAGCACGACGGGATGTTTTCATTTCTATGCGCTTGAACATTTTACTATATATGGAGATCCTGGAACACATTTCTTCGAAGATCTCAGCATCTCTGCGCCTCAATTGAAGACGATAAGCTTAGAGTTTCCCTGTTCACCATATGATATGCATAAGTATTACAATATTGAGATTGATGCCGAGGCCCTTGAAAAGCTTGAGATCAAGGAGGATTCTCTGTCAAATTTTAATTTGAACAACACACAATCGCTTGTCGAAGCCGATATCACAATTGGTTTTCATCCCAGTGAAGATGATGTGGAAGAGGAGGACGATGTTAGGCAGGCTAATGAGTTCCTGACTGCAATTTCTATGGTTAAATATCTCTCTCTTTCATGGAGCTTCTATGAGGCTTGCTCTGTGCCTGCTTTTGATAATTTGATCAAACTAAGGCTGGTTCATTTTGGCTGCTCTCACTGGTGGAGAAATCTAATGAAGTTGCTTGAGAAATCACCTCATTTAGAATGTCTTGTCATAGACGACGGTGTTTATCCAACCCGAAAACGTTACAAGGTGATTGAACTTCTTGAGAAAGAAGATGAGGTGATTGATACTACAAAGCAAACAAAAGTGCTCAACTGGATTCCACCAAAATCTGTTCCCAACTGTCTGGTGTCTCACTTGAAGACCATTTCCATAAGGGGATTTAGAGGAAAACGTTGCATTGGATATCAGGATGAGATGGAAGTGACCAAGTATCTGCTAAAACACGGTCGAGTTCTGGAGAAGATGACTATTTATACTTCTGGTAGATTTCCAAAAAAAGATATCTTCAAAGAAACTTCTATGATTAAATGGGGTTCTGAAGCTGTTCAAGTTGAAATTATCAAGAAGGTGCTTTATGAGGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

491

Amino Acids

56.93

Weight (kDa)

6.01

Isoelectric Point (pI)

43.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 28 - 68 2.1e-06 F-box domain
FBD PF08387 404 - 453 2.3e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 348
AciI CCGC 2 cut(s) 10, 576
AclI AACGTT 2 cut(s) 1126, 1279
AclWI GGATC 3 cut(s) 89, 275, 635
AcsI RAATTY 1 cut(s) 805
AcuI CTGAAG 2 cut(s) 557, 1446
AfaI GTAC 1 cut(s) 20
AfeI AGCGCT 1 cut(s) 542
AfiI CCNNNNNNNGG 1 cut(s) 68
AhlI ACTAGT 1 cut(s) 394
AjnI CCWGG 1 cut(s) 643
AjuI GAANNNNNNNTTGG 2 cut(s) 194, 226
AluBI AGCT 6 cut(s) 251, 563, 702, 778, 963, 1430
AluI AGCT 6 cut(s) 251, 563, 702, 778, 963, 1430
Alw21I GWGCWC 2 cut(s) 331, 1197
Alw26I GTCTC 2 cut(s) 9, 1242
AlwI GGATC 3 cut(s) 89, 275, 635
Aor51HI AGCGCT 1 cut(s) 542
AoxI GGCC 1 cut(s) 765
ApeKI GCWGC 2 cut(s) 371, 1029
ApoI RAATTY 1 cut(s) 805
ArsI GACNNNNNNTTYG 2 cut(s) 132, 164
Asp700I GAANNNNTTC 3 cut(s) 396, 542, 1431
AspLEI GCGC 3 cut(s) 543, 616, 682
AspS9I GGNCC 2 cut(s) 189, 766
AsuHPI GGTGA 5 cut(s) 83, 711, 1065, 1147, 1177
AsuII TTCGAA 1 cut(s) 660
AvaII GGWCC 1 cut(s) 189
AxyI CCTNAGG 1 cut(s) 333
BbsI GAAGAC 2 cut(s) 698, 1253
Bbv12I GWGCWC 2 cut(s) 331, 1197
BbvI GCAGC 2 cut(s) 383, 1016
BccI CCATC 3 cut(s) 139, 292, 1297
BciT130I CCWGG 1 cut(s) 645
BciVI GTATCC 1 cut(s) 42
BclI TGATCA 1 cut(s) 1002
BcoDI GTCTC 2 cut(s) 9, 1242
BcuI ACTAGT 1 cut(s) 394
BfaI CTAG 2 cut(s) 273, 395
BfmI CTRYAG 1 cut(s) 369
BfoI RGCGCY 1 cut(s) 544
BfuI GTATCC 1 cut(s) 42
BglII AGATCT 1 cut(s) 664
BisI GCNGC 3 cut(s) 11, 372, 1030
BlsI GCNGC 3 cut(s) 12, 373, 1031
Bme1390I CCNGG 1 cut(s) 645
Bme18I GGWCC 1 cut(s) 189
BmgT120I GGNCC 2 cut(s) 189, 766
BmrFI CCNGG 1 cut(s) 645
BmrI ACTGGG 1 cut(s) 861
BmsI GCATC 3 cut(s) 502, 681, 748
BmuI ACTGGG 1 cut(s) 861
BpiI GAAGAC 2 cut(s) 698, 1253
BplI GAGNNNNNCTC 2 cut(s) 962, 994
BpmI CTGGAG 1 cut(s) 1364
Bpu14I TTCGAA 1 cut(s) 660
BpuEI CTTGAG 4 cut(s) 488, 800, 1085, 1169
BsaBI GATNNNNATC 2 cut(s) 30, 342
BsaJI CCNNGG 1 cut(s) 762
BsaWI WCCGGW 1 cut(s) 94
Bsc4I CCNNNNNNNGG 1 cut(s) 68
Bse1I ACTGG 3 cut(s) 867, 1043, 1205
Bse21I CCTNAGG 1 cut(s) 333
Bse3DI GCAATG 1 cut(s) 547
Bse8I GATNNNNATC 2 cut(s) 30, 342
BseBI CCWGG 1 cut(s) 645
BseDI CCNNGG 1 cut(s) 762
BseGI GGATG 6 cut(s) 287, 517, 527, 602, 862, 1303
BseJI GATNNNNATC 2 cut(s) 30, 342
BseLI CCNNNNNNNGG 1 cut(s) 68
BseMI GCAATG 1 cut(s) 547
BseMII CTCAG 4 cut(s) 36, 101, 324, 682
BseNI ACTGG 3 cut(s) 867, 1043, 1205
BseRI GAGGAG 1 cut(s) 902
BseXI GCAGC 2 cut(s) 383, 1016
Bsh1236I CGCG 1 cut(s) 348
Bsh1285I CGRYCG 3 cut(s) 62, 232, 1336
BshFI GGCC 1 cut(s) 767
BsiEI CGRYCG 3 cut(s) 62, 232, 1336
BsiHKAI GWGCWC 2 cut(s) 331, 1197
BsiSI CCGG 1 cut(s) 95
BslI CCNNNNNNNGG 1 cut(s) 68
BsmAI GTCTC 2 cut(s) 9, 1242
BsmI GAATGC 1 cut(s) 159
BsnI GGCC 1 cut(s) 767
Bsp119I TTCGAA 1 cut(s) 660
Bsp1286I GDGCHC 2 cut(s) 331, 1197
Bsp143I GATC 7 cut(s) 81, 259, 280, 640, 664, 783, 1002
BspACI CCGC 2 cut(s) 10, 576
BspANI GGCC 1 cut(s) 767
BspCNI CTCAG 4 cut(s) 35, 100, 325, 681
BspFNI CGCG 1 cut(s) 348
BspMAI CTGCAG 1 cut(s) 373
BspPI GGATC 3 cut(s) 89, 275, 635
BspT104I TTCGAA 1 cut(s) 660
BsrDI GCAATG 1 cut(s) 547
BsrI ACTGG 3 cut(s) 867, 1043, 1205
BssECI CCNNGG 1 cut(s) 762
BssMI GATC 7 cut(s) 81, 259, 280, 640, 664, 783, 1002
Bst2UI CCWGG 1 cut(s) 645
Bst4CI ACNGT 5 cut(s) 63, 233, 1106, 1229, 1334
Bst6I CTCTTC 2 cut(s) 216, 879
BstBI TTCGAA 1 cut(s) 660
BstC8I GCNNGC 3 cut(s) 906, 976, 987
BstDEI CTNAG 6 cut(s) 22, 87, 333, 668, 703, 1010
BstF5I GGATG 6 cut(s) 287, 517, 527, 602, 862, 1303
BstFNI CGCG 1 cut(s) 348
BstH2I RGCGCY 1 cut(s) 544
BstHHI GCGC 3 cut(s) 543, 616, 682
BstKTI GATC 7 cut(s) 84, 262, 283, 643, 667, 786, 1005
BstMAI GTCTC 2 cut(s) 9, 1242
BstMBI GATC 7 cut(s) 81, 259, 280, 640, 664, 783, 1002
BstMCI CGRYCG 3 cut(s) 62, 232, 1336
BstMWI GCNNNNNNNGC 1 cut(s) 549
BstNI CCWGG 1 cut(s) 645
BstSCI CCNGG 1 cut(s) 643
BstSFI CTRYAG 1 cut(s) 369
BstUI CGCG 1 cut(s) 348
BstV1I GCAGC 2 cut(s) 383, 1016
BstV2I GAAGAC 2 cut(s) 698, 1253
BstX2I RGATCY 2 cut(s) 640, 664
BstXI CCANNNNNNTGG 1 cut(s) 1231
BstYI RGATCY 2 cut(s) 640, 664
Bsu36I CCTNAGG 1 cut(s) 333
BsuI GTATCC 1 cut(s) 42
BsuRI GGCC 1 cut(s) 767
BtsCI GGATG 6 cut(s) 287, 517, 527, 602, 862, 1303
BtsI GCAGTG 1 cut(s) 366
BtsIMutI CAGTG 4 cut(s) 366, 495, 874, 1036
Cac8I GCNNGC 3 cut(s) 906, 976, 987
CfoI GCGC 3 cut(s) 543, 616, 682
Cfr13I GGNCC 2 cut(s) 189, 766
CseI GACGC 1 cut(s) 337
Csp6I GTAC 1 cut(s) 19
CviAII CATG 3 cut(s) 424, 499, 957
CviQI GTAC 1 cut(s) 19
DdeI CTNAG 6 cut(s) 22, 87, 333, 668, 703, 1010
DpnI GATC 7 cut(s) 83, 261, 282, 642, 666, 785, 1004
DpnII GATC 7 cut(s) 81, 259, 280, 640, 664, 783, 1002
Eam1104I CTCTTC 2 cut(s) 216, 879
EarI CTCTTC 2 cut(s) 216, 879
Eco32I GATATC 3 cut(s) 847, 1292, 1390
Eco47I GGWCC 1 cut(s) 189
Eco47III AGCGCT 1 cut(s) 542
Eco57I CTGAAG 2 cut(s) 557, 1446
Eco81I CCTNAGG 1 cut(s) 333
EcoO109I RGGNCCY 1 cut(s) 766
EcoRII CCWGG 1 cut(s) 643
EcoRV GATATC 3 cut(s) 847, 1292, 1390
EcoT22I ATGCAT 2 cut(s) 517, 735
FaeI CATG 3 cut(s) 427, 502, 960
FatI CATG 3 cut(s) 423, 498, 956
FauNDI CATATG 2 cut(s) 185, 724
FbaI TGATCA 1 cut(s) 1002
Fnu4HI GCNGC 3 cut(s) 11, 372, 1030
FokI GGATG 6 cut(s) 274, 524, 534, 609, 849, 1310
Fsp4HI GCNGC 3 cut(s) 11, 372, 1030
FspBI CTAG 2 cut(s) 273, 395
GlaI GCGC 3 cut(s) 542, 615, 681
GluI GCNGC 3 cut(s) 11, 372, 1030
GsuI CTGGAG 1 cut(s) 1364
HaeII RGCGCY 1 cut(s) 544
HaeIII GGCC 1 cut(s) 767
HapII CCGG 1 cut(s) 95
HgaI GACGC 1 cut(s) 337
HhaI GCGC 3 cut(s) 543, 616, 682
Hin1II CATG 3 cut(s) 427, 502, 960
Hin6I GCGC 3 cut(s) 541, 614, 680
HinP1I GCGC 3 cut(s) 541, 614, 680
HindIII AAGCTT 2 cut(s) 700, 776
HinfI GANTC 2 cut(s) 794, 1204
HpaII CCGG 1 cut(s) 95
HphI GGTGA 5 cut(s) 83, 711, 1065, 1147, 1177
Hpy166II GTNNAC 1 cut(s) 719
Hpy188I TCNGA 5 cut(s) 25, 59, 152, 537, 1426
Hpy188III TCNNGA 8 cut(s) 278, 332, 352, 919, 1148, 1295, 1343, 1450
Hpy8I GTNNAC 1 cut(s) 719
Hpy99I CGWCG 3 cut(s) 353, 595, 1106
HpyAV CCTTC 2 cut(s) 320, 1447
HpyCH4III ACNGT 5 cut(s) 63, 233, 1106, 1229, 1334
HpyCH4IV ACGT 3 cut(s) 384, 1126, 1279
HpyCH4V TGCA 5 cut(s) 371, 515, 733, 926, 1284
HpyF10VI GCNNNNNNNGC 1 cut(s) 549
HpyF3I CTNAG 6 cut(s) 22, 87, 333, 668, 703, 1010
HpySE526I ACGT 3 cut(s) 384, 1126, 1279
Hsp92II CATG 3 cut(s) 427, 502, 960
HspAI GCGC 3 cut(s) 541, 614, 680
Ksp22I TGATCA 1 cut(s) 1002
Kzo9I GATC 7 cut(s) 81, 259, 280, 640, 664, 783, 1002
LmnI GCTCC 3 cut(s) 334, 560, 960
Lsp1109I GCAGC 2 cut(s) 383, 1016
LweI GCATC 3 cut(s) 502, 681, 748
MaeI CTAG 2 cut(s) 273, 395
MaeII ACGT 3 cut(s) 384, 1126, 1279
MaeIII GTNAC 5 cut(s) 90, 110, 380, 1127, 1309
MalI GATC 7 cut(s) 83, 261, 282, 642, 666, 785, 1004
MboI GATC 7 cut(s) 81, 259, 280, 640, 664, 783, 1002
MfeI CAATTG 2 cut(s) 686, 852
MflI RGATCY 2 cut(s) 640, 664
MhlI GDGCHC 2 cut(s) 331, 1197
MluCI AATT 8 cut(s) 355, 686, 805, 811, 852, 927, 997, 1443
MmeI TCCRAC 2 cut(s) 82, 1139
Mph1103I ATGCAT 2 cut(s) 517, 735
MroXI GAANNNNTTC 3 cut(s) 396, 542, 1431
MseI TTAA 4 cut(s) 476, 810, 939, 1413
MslI CAYNNNNRTG 3 cut(s) 520, 609, 867
MspI CCGG 1 cut(s) 95
MspR9I CCNGG 1 cut(s) 645
MunI CAATTG 2 cut(s) 686, 852
Mva1269I GAATGC 1 cut(s) 159
MvaI CCWGG 1 cut(s) 645
MvnI CGCG 1 cut(s) 348
MwoI GCNNNNNNNGC 1 cut(s) 549
NdeI CATATG 2 cut(s) 185, 724
NdeII GATC 7 cut(s) 81, 259, 280, 640, 664, 783, 1002
NlaIII CATG 3 cut(s) 427, 502, 960
NmeAIII GCCGAG 1 cut(s) 787
NmuCI GTSAC 2 cut(s) 110, 1309
NsiI ATGCAT 2 cut(s) 517, 735
NspV TTCGAA 1 cut(s) 660
PctI GAATGC 1 cut(s) 159
PdmI GAANNNNTTC 3 cut(s) 396, 542, 1431
PfeI GAWTC 2 cut(s) 794, 1204
PfoI TCCNGGA 1 cut(s) 643
PkrI GCNGC 3 cut(s) 12, 373, 1031
Psp1406I AACGTT 2 cut(s) 1126, 1279
Psp6I CCWGG 1 cut(s) 643
PspGI CCWGG 1 cut(s) 643
PspPI GGNCC 2 cut(s) 189, 766
PstI CTGCAG 1 cut(s) 373
PsuI RGATCY 2 cut(s) 640, 664
RsaI GTAC 1 cut(s) 20
RsaNI GTAC 1 cut(s) 19
RseI CAYNNNNRTG 3 cut(s) 520, 609, 867
SaqAI TTAA 4 cut(s) 476, 810, 939, 1413
SatI GCNGC 3 cut(s) 11, 372, 1030
Sau3AI GATC 7 cut(s) 81, 259, 280, 640, 664, 783, 1002
Sau96I GGNCC 2 cut(s) 189, 766
ScrFI CCNGG 1 cut(s) 645
SduI GDGCHC 2 cut(s) 331, 1197
SfaNI GCATC 3 cut(s) 502, 681, 748
SfcI CTRYAG 1 cut(s) 369
SfuI TTCGAA 1 cut(s) 660
SinI GGWCC 1 cut(s) 189
SmiMI CAYNNNNRTG 3 cut(s) 520, 609, 867
SmlI CTYRAG 4 cut(s) 467, 779, 1064, 1148
SmoI CTYRAG 4 cut(s) 467, 779, 1064, 1148
SpeI ACTAGT 1 cut(s) 394
Sse9I AATT 8 cut(s) 355, 686, 805, 811, 852, 927, 997, 1443
SsiI CCGC 2 cut(s) 10, 576
SspI AATATT 1 cut(s) 748
SspMI CTAG 2 cut(s) 273, 395
StyD4I CCNGG 1 cut(s) 643
TaaI ACNGT 5 cut(s) 63, 233, 1106, 1229, 1334
TaiI ACGT 3 cut(s) 387, 1129, 1282
TaqI TCGA 5 cut(s) 228, 351, 660, 837, 1336
TasI AATT 8 cut(s) 355, 686, 805, 811, 852, 927, 997, 1443
TatI WGTACW 1 cut(s) 18
TauI GCSGC 1 cut(s) 13
TfiI GAWTC 2 cut(s) 794, 1204
Tru1I TTAA 4 cut(s) 476, 810, 939, 1413
Tru9I TTAA 4 cut(s) 476, 810, 939, 1413
TscAI CASTG 4 cut(s) 373, 495, 874, 1043
TseFI GTSAC 2 cut(s) 110, 1309
TseI GCWGC 2 cut(s) 371, 1029
Tsp45I GTSAC 2 cut(s) 110, 1309
TspDTI ATGAA 8 cut(s) 234, 235, 302, 593, 851, 945, 1010, 1070
TspGWI ACGGA 2 cut(s) 203, 398
TspRI CASTG 4 cut(s) 373, 495, 874, 1043
VpaK11BI GGWCC 1 cut(s) 189
XapI RAATTY 1 cut(s) 805
XcmI CCANNNNNNNNNTGG 1 cut(s) 554
XmnI GAANNNNTTC 3 cut(s) 396, 542, 1431
XspI CTAG 2 cut(s) 273, 395
Zsp2I ATGCAT 2 cut(s) 517, 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.