AT1G78730

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000062
Physical Location & Seq
Reverse (-)
29607689 .. 29609441
1753 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G78730.1

Sequence Viewer

Length: 1263 bp
ATGGATGAAGACGCAGAGAGTCGTGTGAGTTCCACACGCTCGTATGATAGGAGAGGTCATCTAGATTGGCTGAGAAAATTACCAGATTCATTGCTATGTCAGGTTTTCTTGAATCTTCCCACAAAAGATGTGGTTAAGACTAGTGTGTTATCAAGTACATGGGGAAATATATGGAGAAGTGTACCTGGTTTGGACTTGGGGTATGGTGACTTCCCGGAGTACAACGCTTTTGTGAGCTTTGTCGATAGCTTTCTGGGTTTTAACAGCGAATCTCGCCTGCAAAATTTCAAGTTAAACTACCAATATTTAAGGCTAAAGTATGAATGGAAGTGGACTGAGCTTGATAATGCTAATGTCACCCGGTGGATCAACACAGTTATTAAGCGGAAAGTTGAACATCTTCATCTCTCTGACGTGACCTTCAGTAATCCCGAGTCTGTTTCTTTACCTTGTGTCAAAGTTATGTATCTAGATATGGTTAAGTTTGCCAACGATTTGGCTTTCGAAATGCTCATCTCTGGCTGCCCAGTTCTCGAAAGCTTAACTATAAAGAGGAGTGCTTGTGACAATGTAGATTATTTACGTGTGTGCTCTCAGTCTCTATTGAGTTTCACCCTTGTTGGCCACTGTAACGAGGATATGGTTAAAGAGCAAGTAGTTGCAATAGATGCTCCCAGGCTTGAGGATCTCAAGCTTTATTGTCATGAAACTGCAAGTTTCATAATAAAGAATCCGGCTTCCCTTGTTAAGATGGACATCGACATTATGTTTAACTTGTCTTCCGAACAGAAGTTTGACCCAAATGATCTACCAAAGAGAAATATGATCCGTAATTTTCTCCTCGGGATCTCTGGTGTCAAAGAAATGGAAATCTCTTCGCATACCCTCGAGGTCATCTATAATTACTCAAGATGTGAACGATTACCCGTATTCCGTAACTTATCTTCCTTGCATGCTGACTTCGACGACTACAGGTGGGAAATGTTGCCAGGATTTAGTAAAACTCCAGGGGAGGAGCCAATTAGTATTTTACCTGGACCTCAGTGCAACCTACCAGCTCTCGAGTTTGTTGACATACTAAAGCCAATGGTAGAGAAGGAAACAGAATTGAAACTAATGAGTTACTTTCTGGAGAAGTCAACAATCCTCAAGAAACTAACACTACGCTTGGGTGATTTCAGAGGAAATGAAGAATCTGCCTTGCTCAAGAAACTCCTTACCATTCCAAGACTCTCTAGCTCATGCCAAGTTGTAGTTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

420

Amino Acids

48.28

Weight (kDa)

5.66

Isoelectric Point (pI)

42.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 26 - 62 1.2e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 79 - 253 4.3e-07 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 133 - 233 9.1e-12 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 151 - 176 5e-09 Leucine Rich Repeat
FBD PF08387 347 - 388 8.9e-09 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 887
AciI CCGC 1 cut(s) 385
AclWI GGATC 4 cut(s) 374, 693, 820, 854
AcoI YGGCCR 1 cut(s) 622
AcsI RAATTY 1 cut(s) 283
AcuI CTGAAG 1 cut(s) 406
AdeI CACNNNGTG 1 cut(s) 363
AfaI GTAC 3 cut(s) 157, 183, 221
AflIII ACRYGT 1 cut(s) 583
AgsI TTSAA 4 cut(s) 112, 289, 395, 1111
AhlI ACTAGT 1 cut(s) 140
AjiI CACGTC 1 cut(s) 415
AjnI CCWGG 5 cut(s) 184, 674, 988, 1006, 1033
AjuI GAANNNNNNNTTGG 1 cut(s) 1239
AluBI AGCT 7 cut(s) 237, 249, 340, 540, 694, 1058, 1239
AluI AGCT 7 cut(s) 237, 249, 340, 540, 694, 1058, 1239
Alw21I GWGCWC 1 cut(s) 593
Alw26I GTCTC 1 cut(s) 603
AlwI GGATC 4 cut(s) 374, 693, 820, 854
Ama87I CYCGRG 4 cut(s) 431, 842, 887, 1061
AoxI GGCC 1 cut(s) 622
ApeKI GCWGC 1 cut(s) 522
ApoI RAATTY 1 cut(s) 283
Asp700I GAANNNNTTC 1 cut(s) 399
AspS9I GGNCC 1 cut(s) 1037
AsuC2I CCSGG 2 cut(s) 215, 361
AsuHPI GGTGA 4 cut(s) 218, 349, 604, 1184
AsuII TTCGAA 1 cut(s) 504
AvaI CYCGRG 4 cut(s) 431, 842, 887, 1061
AvaII GGWCC 1 cut(s) 1037
BalI TGGCCA 1 cut(s) 624
BarI GAAGNNNNNNTAC 4 cut(s) 194, 226, 928, 960
BbsI GAAGAC 2 cut(s) 15, 771
Bbv12I GWGCWC 1 cut(s) 593
BbvI GCAGC 1 cut(s) 509
BccI CCATC 1 cut(s) 745
BciT130I CCWGG 5 cut(s) 186, 676, 990, 1008, 1035
BcnI CCSGG 2 cut(s) 215, 361
BcoDI GTCTC 1 cut(s) 603
BcuI ACTAGT 1 cut(s) 140
BfaI CTAG 4 cut(s) 62, 141, 470, 1236
BfmI CTRYAG 1 cut(s) 970
BisI GCNGC 1 cut(s) 523
BlsI GCNGC 1 cut(s) 524
Bme1390I CCNGG 7 cut(s) 186, 215, 361, 676, 990, 1008, 1035
Bme18I GGWCC 1 cut(s) 1037
BmeT110I CYCGRG 4 cut(s) 431, 842, 887, 1061
BmgBI CACGTC 1 cut(s) 415
BmgT120I GGNCC 1 cut(s) 1037
BmiI GGNNCC 1 cut(s) 1017
BmrFI CCNGG 7 cut(s) 186, 215, 361, 676, 990, 1008, 1035
BmrI ACTGGG 1 cut(s) 521
BmsI GCATC 1 cut(s) 658
BmuI ACTGGG 1 cut(s) 521
BpiI GAAGAC 2 cut(s) 15, 771
BpmI CTGGAG 2 cut(s) 990, 1151
Bpu14I TTCGAA 1 cut(s) 504
BpuEI CTTGAG 5 cut(s) 674, 701, 892, 1133, 1190
BpuMI CCSGG 2 cut(s) 215, 361
BsaAI YACGTR 1 cut(s) 584
BsaBI GATNNNNATC 1 cut(s) 755
BsaJI CCNNGG 3 cut(s) 674, 841, 1007
BsaXI ACNNNNNCTCC 2 cut(s) 547, 577
Bse1I ACTGG 1 cut(s) 527
Bse3DI GCAATG 1 cut(s) 89
Bse8I GATNNNNATC 1 cut(s) 755
BseBI CCWGG 5 cut(s) 186, 676, 990, 1008, 1035
BseDI CCNNGG 3 cut(s) 674, 841, 1007
BseGI GGATG 1 cut(s) 10
BseJI GATNNNNATC 1 cut(s) 755
BseMI GCAATG 1 cut(s) 89
BseMII CTCAG 4 cut(s) 62, 327, 608, 1055
BseNI ACTGG 1 cut(s) 527
BseRI GAGGAG 3 cut(s) 568, 830, 1028
BseXI GCAGC 1 cut(s) 509
BshFI GGCC 1 cut(s) 624
BsiHKAI GWGCWC 1 cut(s) 593
BsiHKCI CYCGRG 4 cut(s) 431, 842, 887, 1061
BsiSI CCGG 3 cut(s) 215, 361, 734
BsmAI GTCTC 1 cut(s) 603
BsnI GGCC 1 cut(s) 624
BsoBI CYCGRG 4 cut(s) 431, 842, 887, 1061
Bsp119I TTCGAA 1 cut(s) 504
Bsp1286I GDGCHC 1 cut(s) 593
Bsp143I GATC 5 cut(s) 366, 685, 805, 825, 846
BspACI CCGC 1 cut(s) 385
BspANI GGCC 1 cut(s) 624
BspCNI CTCAG 4 cut(s) 63, 328, 607, 1054
BspHI TCATGA 1 cut(s) 703
BspLI GGNNCC 1 cut(s) 1017
BspPI GGATC 4 cut(s) 374, 693, 820, 854
BspT104I TTCGAA 1 cut(s) 504
BsrDI GCAATG 1 cut(s) 89
BsrI ACTGG 1 cut(s) 527
BssECI CCNNGG 3 cut(s) 674, 841, 1007
BssMI GATC 5 cut(s) 366, 685, 805, 825, 846
Bst2UI CCWGG 5 cut(s) 186, 676, 990, 1008, 1035
Bst4CI ACNGT 2 cut(s) 376, 629
Bst6I CTCTTC 1 cut(s) 880
BstAPI GCANNNNNTGC 1 cut(s) 668
BstBAI YACGTR 1 cut(s) 584
BstBI TTCGAA 1 cut(s) 504
BstC8I GCNNGC 2 cut(s) 278, 954
BstDEI CTNAG 4 cut(s) 71, 336, 594, 1041
BstF5I GGATG 1 cut(s) 10
BstKTI GATC 5 cut(s) 369, 688, 808, 828, 849
BstMAI GTCTC 1 cut(s) 603
BstMBI GATC 5 cut(s) 366, 685, 805, 825, 846
BstMWI GCNNNNNNNGC 2 cut(s) 273, 668
BstNI CCWGG 5 cut(s) 186, 676, 990, 1008, 1035
BstNSI RCATGY 1 cut(s) 956
BstSCI CCNGG 7 cut(s) 184, 213, 359, 674, 988, 1006, 1033
BstSFI CTRYAG 1 cut(s) 970
BstV1I GCAGC 1 cut(s) 509
BstV2I GAAGAC 2 cut(s) 15, 771
BstX2I RGATCY 2 cut(s) 685, 846
BstXI CCANNNNNNTGG 1 cut(s) 496
BstYI RGATCY 2 cut(s) 685, 846
BsuRI GGCC 1 cut(s) 624
BtrI CACGTC 1 cut(s) 415
BtsCI GGATG 1 cut(s) 10
BtsIMutI CAGTG 2 cut(s) 625, 1049
Cac8I GCNNGC 2 cut(s) 278, 954
CciI TCATGA 1 cut(s) 703
Cfr13I GGNCC 1 cut(s) 1037
CseI GACGC 1 cut(s) 20
CsiI ACCWGGT 1 cut(s) 184
Csp6I GTAC 3 cut(s) 156, 182, 220
CspCI CAANNNNNGTGG 2 cut(s) 111, 146
CviAII CATG 4 cut(s) 159, 704, 953, 1242
CviQI GTAC 3 cut(s) 156, 182, 220
DdeI CTNAG 4 cut(s) 71, 336, 594, 1041
DpnI GATC 5 cut(s) 368, 687, 807, 827, 848
DpnII GATC 5 cut(s) 366, 685, 805, 825, 846
DraIII CACNNNGTG 1 cut(s) 363
EaeI YGGCCR 1 cut(s) 622
Eam1104I CTCTTC 1 cut(s) 880
EarI CTCTTC 1 cut(s) 880
Eco47I GGWCC 1 cut(s) 1037
Eco57I CTGAAG 1 cut(s) 406
Eco88I CYCGRG 4 cut(s) 431, 842, 887, 1061
EcoRII CCWGG 5 cut(s) 184, 674, 988, 1006, 1033
FaeI CATG 4 cut(s) 162, 707, 956, 1245
FatI CATG 4 cut(s) 158, 703, 952, 1241
Fnu4HI GCNGC 1 cut(s) 523
FokI GGATG 1 cut(s) 17
Fsp4HI GCNGC 1 cut(s) 523
FspBI CTAG 4 cut(s) 62, 141, 470, 1236
GluI GCNGC 1 cut(s) 523
GsuI CTGGAG 2 cut(s) 990, 1151
HaeIII GGCC 1 cut(s) 624
HapII CCGG 3 cut(s) 215, 361, 734
HgaI GACGC 1 cut(s) 20
Hin1II CATG 4 cut(s) 162, 707, 956, 1245
HincII GTYRAC 2 cut(s) 1072, 1140
HindII GTYRAC 2 cut(s) 1072, 1140
HindIII AAGCTT 2 cut(s) 538, 692
HinfI GANTC 8 cut(s) 19, 86, 112, 269, 434, 730, 1193, 1230
HpaII CCGG 3 cut(s) 215, 361, 734
HphI GGTGA 4 cut(s) 218, 349, 604, 1184
Hpy166II GTNNAC 5 cut(s) 182, 333, 917, 1072, 1140
Hpy188I TCNGA 4 cut(s) 412, 784, 1181, 1262
Hpy8I GTNNAC 5 cut(s) 182, 333, 917, 1072, 1140
Hpy99I CGWCG 1 cut(s) 968
HpyAV CCTTC 2 cut(s) 430, 1090
HpyCH4III ACNGT 2 cut(s) 376, 629
HpyCH4IV ACGT 2 cut(s) 414, 583
HpyCH4V TGCA 5 cut(s) 280, 662, 713, 952, 1047
HpyF10VI GCNNNNNNNGC 2 cut(s) 273, 668
HpyF3I CTNAG 4 cut(s) 71, 336, 594, 1041
HpySE526I ACGT 2 cut(s) 414, 583
Hsp92II CATG 4 cut(s) 162, 707, 956, 1245
Kzo9I GATC 5 cut(s) 366, 685, 805, 825, 846
LmnI GCTCC 2 cut(s) 676, 1015
Lsp1109I GCAGC 1 cut(s) 509
LweI GCATC 1 cut(s) 658
MabI ACCWGGT 1 cut(s) 184
MaeI CTAG 4 cut(s) 62, 141, 470, 1236
MaeII ACGT 2 cut(s) 414, 583
MaeIII GTNAC 7 cut(s) 206, 355, 415, 563, 629, 935, 1121
MalI GATC 5 cut(s) 368, 687, 807, 827, 848
MboI GATC 5 cut(s) 366, 685, 805, 825, 846
MboII GAAGA 7 cut(s) 20, 107, 392, 771, 867, 936, 1202
MflI RGATCY 2 cut(s) 685, 846
MhlI GDGCHC 1 cut(s) 593
MlsI TGGCCA 1 cut(s) 624
MluCI AATT 6 cut(s) 77, 283, 832, 901, 1020, 1106
MluNI TGGCCA 1 cut(s) 624
MlyI GAGTC 3 cut(s) 28, 443, 1224
Mox20I TGGCCA 1 cut(s) 624
MroXI GAANNNNTTC 1 cut(s) 399
MscI TGGCCA 1 cut(s) 624
MslI CAYNNNNRTG 1 cut(s) 94
Msp20I TGGCCA 1 cut(s) 624
MspI CCGG 3 cut(s) 215, 361, 734
MspR9I CCNGG 7 cut(s) 186, 215, 361, 676, 990, 1008, 1035
MvaI CCWGG 5 cut(s) 186, 676, 990, 1008, 1035
MwoI GCNNNNNNNGC 2 cut(s) 273, 668
NciI CCSGG 2 cut(s) 215, 361
NdeII GATC 5 cut(s) 366, 685, 805, 825, 846
NlaIII CATG 4 cut(s) 162, 707, 956, 1245
NlaIV GGNNCC 1 cut(s) 1017
NmuCI GTSAC 4 cut(s) 206, 355, 415, 563
NspI RCATGY 1 cut(s) 956
NspV TTCGAA 1 cut(s) 504
PaeI GCATGC 1 cut(s) 956
PaeR7I CTCGAG 2 cut(s) 887, 1061
PagI TCATGA 1 cut(s) 703
PdmI GAANNNNTTC 1 cut(s) 399
PfeI GAWTC 5 cut(s) 86, 112, 269, 730, 1193
PfoI TCCNGGA 1 cut(s) 213
PkrI GCNGC 1 cut(s) 524
PleI GAGTC 3 cut(s) 27, 442, 1224
PpsI GAGTC 3 cut(s) 27, 442, 1224
Ppu21I YACGTR 1 cut(s) 584
Psp6I CCWGG 5 cut(s) 184, 674, 988, 1006, 1033
PspGI CCWGG 5 cut(s) 184, 674, 988, 1006, 1033
PspN4I GGNNCC 1 cut(s) 1017
PspPI GGNCC 1 cut(s) 1037
PspXI VCTCGAGB 1 cut(s) 887
PsuI RGATCY 2 cut(s) 685, 846
RsaI GTAC 3 cut(s) 157, 183, 221
RsaNI GTAC 3 cut(s) 156, 182, 220
RseI CAYNNNNRTG 1 cut(s) 94
SatI GCNGC 1 cut(s) 523
Sau3AI GATC 5 cut(s) 366, 685, 805, 825, 846
Sau96I GGNCC 1 cut(s) 1037
SchI GAGTC 3 cut(s) 28, 443, 1224
ScrFI CCNGG 7 cut(s) 186, 215, 361, 676, 990, 1008, 1035
SduI GDGCHC 1 cut(s) 593
SexAI ACCWGGT 1 cut(s) 184
SfaNI GCATC 1 cut(s) 658
SfcI CTRYAG 1 cut(s) 970
Sfr274I CTCGAG 2 cut(s) 887, 1061
SfuI TTCGAA 1 cut(s) 504
SinI GGWCC 1 cut(s) 1037
SlaI CTCGAG 2 cut(s) 887, 1061
SmiMI CAYNNNNRTG 1 cut(s) 94
SmlI CTYRAG 7 cut(s) 680, 689, 887, 907, 1061, 1148, 1205
SmoI CTYRAG 7 cut(s) 680, 689, 887, 907, 1061, 1148, 1205
SpeI ACTAGT 1 cut(s) 140
SphI GCATGC 1 cut(s) 956
Sse9I AATT 6 cut(s) 77, 283, 832, 901, 1020, 1106
SsiI CCGC 1 cut(s) 385
SspI AATATT 1 cut(s) 305
SspMI CTAG 4 cut(s) 62, 141, 470, 1236
StyD4I CCNGG 7 cut(s) 184, 213, 359, 674, 988, 1006, 1033
TaaI ACNGT 2 cut(s) 376, 629
TaiI ACGT 2 cut(s) 417, 586
TaqI TCGA 7 cut(s) 243, 504, 534, 759, 888, 963, 1062
TasI AATT 6 cut(s) 77, 283, 832, 901, 1020, 1106
TatI WGTACW 2 cut(s) 155, 219
TfiI GAWTC 5 cut(s) 86, 112, 269, 730, 1193
TscAI CASTG 2 cut(s) 632, 1049
TseFI GTSAC 4 cut(s) 206, 355, 415, 563
TseI GCWGC 1 cut(s) 522
Tsp45I GTSAC 4 cut(s) 206, 355, 415, 563
TspDTI ATGAA 7 cut(s) 21, 78, 336, 392, 709, 720, 1203
TspGWI ACGGA 2 cut(s) 818, 923
TspRI CASTG 2 cut(s) 632, 1049
VpaK11BI GGWCC 1 cut(s) 1037
XapI RAATTY 1 cut(s) 283
XbaI TCTAGA 2 cut(s) 61, 469
XceI RCATGY 1 cut(s) 956
XcmI CCANNNNNNNNNTGG 1 cut(s) 127
XhoI CTCGAG 2 cut(s) 887, 1061
XmnI GAANNNNTTC 1 cut(s) 399
XspI CTAG 4 cut(s) 62, 141, 470, 1236
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.