MD11G1266000.v1.1

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000062
Physical Location & Seq
Reverse (-)
38103592 .. 38118128
14537 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1266000.v1.1.491

Sequence Viewer

Length: 1752 bp
ATGAATCCAAATTTGCCGAGTAAAAATGGATTCGAATTGGGAGACTCGAAACTAAAAAGGAACTCAAGGCCTCAAGAAGGAGTTGAAGATAGGATCAGTGAATTGCCAGATGCAGTTCTTTGTCACATTCTTTCTTTCGTTCCAACGAAGTATGCCGCGAGGACCAGCATTCTGTCTACAAGATGGAAGGACAAATGGGTTTCTGTTCCTAATCTGGACTTCGAACATAAATCAAAGTCTTTTATTGCGGAAAAGAAATATAAGTGCGACTCTCTTGTTTTTTTTAAAGTTTGTTCATCGCGTACTCTCCCTTCTGATGATGTTAAAAAGTTTCGTCTTCATTGTTCATGCTATGTGAAAATGGGTTCGAATTCGGAGACTCGAAGACTAAAAGAGAATTCAAAGCCTCGAGCAGGAGGTGAAGATAGGATTAGTCGATTGCCAGATGCTGTTCTTTGTCACATACTTTCCTTAATTCCAACAAAGTATGCTGTGAGGAGCAGCATTCTGTCCAACAGATGGAAGAACATATGGGCTTCTGTTCCTAATCTGGACTTTGAAGATAGATCAAACCGTTGTATCGCGGAAAAGAAATATAAGTGCGACACTGTTGGTTTTTCGACCTTTGTTGATCGTGTGCTTTCCCTTCGTGATTCATCAATAGACATTAAAAAGTTTCGTCTTCATTGGGTCTGCTCTAGTGACGATTTCTCTCGTATTGATGGTTGGATTCAAACTGCCGTCCAGCATAATGTCGTTGAACTTGACCTTCTAGTTGAAACGGATTCTAGTGATGATTTTATATTTGAGTTTCCTCAATGCATTTTCAGTTGTAAAACACTTGTGGCTTTGAAGGTGTATTCAAATTGTATTAGCTACAGTCCTCCTACATCAGGGTGCTTCCTAAATCTCAAGACCCTCTATGTCGGAGCTGAATATCCCGATAGTGACTCGGTGGAAAAGATTTTTTCTTGCTGCCCTGTACTTGAAGATTTAACTATAATGGGACTTCTTGGTCAATATGAGGTTTTGAATTACAAGATCTCTGCGCCTGAATTAAACACATTAAGGTTGAACTTACCTGTAGATGTTGGAGATCATGATCAGAACCACAGTATTTTTATTAGTTGTCCGAAGCTTGAAAACCTTGTTATCAGGCAGGATATTTTGTCGAGTTATATATTTGTGAACGTCAAATCCCTTGTTAAAGCCAGTTTTACTCTCTTTTTCCATAATGCGGAGAATCTACAACCCAATTTCGATAACCGTGCAATTACCTGTCTGGCAGGAATTTCTAATGTTCAGTGTCTTTCTCTATCAGCTCATCATTTTTTGAAGGGTCATTGTCTACCGGCATTTGATAATTTAAGAGAACTGAAGCTGGTTCTTCACGATTGCTATCATTGGGATTTGCTAACAGAGTTGCTCAAGAGATCACCTATTTTGGAATATCTTGTCGTAGAATATGAAGAAGATAAGGAATGTGCTGACGATTATGATGAGCATGAGTACTTAAAACATGTCTTATACTCAGAGCATCGATGGAGTACACCAGAGTCTGTGCCTATTTGTTTAATATCACACCTCAAGACTATCACTATAAGGGGATTCAAGGGATACCCGCATGAGAAGAAAGTGGCAAAGTATCTGTTAGAGAATGGTAAAGTTTTGAATAAGATGACTATTCACAATGGGTTATACAAAGAGTTAACACAGAAAAGGGGTTCTACGACTTGCCAAGTTGAATTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

584

Amino Acids

66.8

Weight (kDa)

7.24

Isoelectric Point (pI)

44.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 32 - 71 7.6e-08 F-box domain
F-box PF00646 144 - 183 4.5e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 218 - 563 1.1e-10 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 240 - 391 1.3e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 518 - 562 1.3e-17 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1014
AccB7I CCANNNNNTGG 1 cut(s) 519
AccI GTMKAC 2 cut(s) 176, 1348
AccII CGCG 3 cut(s) 158, 301, 584
AciI CCGC 5 cut(s) 156, 248, 584, 1238, 1622
AclWI GGATC 1 cut(s) 101
AcsI RAATTY 4 cut(s) 10, 370, 397, 1290
AcuI CTGAAG 1 cut(s) 1397
AfaI GTAC 4 cut(s) 304, 984, 1511, 1549
AfiI CCNNNNNNNGG 5 cut(s) 77, 413, 519, 893, 1237
AflIII ACRYGT 1 cut(s) 1519
AloI GAACNNNNNNTCC 2 cut(s) 1181, 1213
AluBI AGCT 5 cut(s) 876, 932, 1138, 1322, 1381
AluI AGCT 5 cut(s) 876, 932, 1138, 1322, 1381
Alw26I GTCTC 2 cut(s) 36, 371
AlwI GGATC 1 cut(s) 101
AlwNI CAGNNNCTG 2 cut(s) 449, 1559
Ama87I CYCGRG 1 cut(s) 408
AoxI GGCC 1 cut(s) 68
ApeKI GCWGC 2 cut(s) 501, 975
ApoI RAATTY 4 cut(s) 10, 370, 397, 1290
AspLEI GCGC 1 cut(s) 1051
AspS9I GGNCC 1 cut(s) 162
AsuHPI GGTGA 2 cut(s) 431, 1428
AsuII TTCGAA 3 cut(s) 33, 222, 368
AvaI CYCGRG 1 cut(s) 408
AvaII GGWCC 1 cut(s) 162
BaeI ACNNNNGTAYC 2 cut(s) 562, 595
BarI GAAGNNNNNNTAC 2 cut(s) 295, 327
BbsI GAAGAC 3 cut(s) 329, 391, 674
BbvI GCAGC 2 cut(s) 513, 962
BccI CCATC 4 cut(s) 177, 513, 716, 1536
BceAI ACGGC 1 cut(s) 725
BcgI CGANNNNNNTGC 2 cut(s) 1250, 1284
BciVI GTATCC 1 cut(s) 1610
BclI TGATCA 1 cut(s) 1102
BcoDI GTCTC 2 cut(s) 36, 371
BfaI CTAG 3 cut(s) 699, 773, 789
BfmI CTRYAG 2 cut(s) 877, 1083
BfuI GTATCC 1 cut(s) 1610
BglII AGATCT 1 cut(s) 1041
BisI GCNGC 3 cut(s) 156, 502, 976
BlsI GCNGC 3 cut(s) 157, 503, 977
BmcAI AGTACT 1 cut(s) 1511
Bme18I GGWCC 1 cut(s) 162
BmeT110I CYCGRG 1 cut(s) 408
BmgT120I GGNCC 1 cut(s) 162
BmsI GCATC 3 cut(s) 100, 436, 1546
BpiI GAAGAC 3 cut(s) 329, 391, 674
Bpu14I TTCGAA 3 cut(s) 33, 222, 368
BpuEI CTTGAG 5 cut(s) 49, 57, 896, 1412, 1571
Bsa29I ATCGAT 1 cut(s) 1540
BsaBI GATNNNNATC 2 cut(s) 1101, 1398
Bsc4I CCNNNNNNNGG 5 cut(s) 77, 413, 519, 893, 1237
Bse118I RCCGGY 1 cut(s) 1351
Bse1I ACTGG 1 cut(s) 1212
Bse8I GATNNNNATC 2 cut(s) 1101, 1398
BseCI ATCGAT 1 cut(s) 1540
BseJI GATNNNNATC 2 cut(s) 1101, 1398
BseLI CCNNNNNNNGG 5 cut(s) 77, 413, 519, 893, 1237
BseMII CTCAG 1 cut(s) 1545
BseNI ACTGG 1 cut(s) 1212
BseRI GAGGAG 1 cut(s) 511
BseXI GCAGC 2 cut(s) 513, 962
Bsh1236I CGCG 3 cut(s) 158, 301, 584
BshFI GGCC 1 cut(s) 70
BshVI ATCGAT 1 cut(s) 1540
BsiHKCI CYCGRG 1 cut(s) 408
BsiSI CCGG 1 cut(s) 1352
BslFI GGGAC 1 cut(s) 1020
BslI CCNNNNNNNGG 5 cut(s) 77, 413, 519, 893, 1237
BsmAI GTCTC 2 cut(s) 36, 371
BsmFI GGGAC 1 cut(s) 1020
BsmI GAATGC 2 cut(s) 168, 504
BsnI GGCC 1 cut(s) 70
BsoBI CYCGRG 1 cut(s) 408
Bsp119I TTCGAA 3 cut(s) 33, 222, 368
Bsp143I GATC 7 cut(s) 93, 566, 631, 1041, 1096, 1102, 1433
BspACI CCGC 5 cut(s) 156, 248, 584, 1238, 1622
BspANI GGCC 1 cut(s) 70
BspCNI CTCAG 1 cut(s) 1544
BspDI ATCGAT 1 cut(s) 1540
BspFNI CGCG 3 cut(s) 158, 301, 584
BspHI TCATGA 1 cut(s) 1099
BspPI GGATC 1 cut(s) 101
BspT104I TTCGAA 3 cut(s) 33, 222, 368
BsrFI RCCGGY 1 cut(s) 1351
BsrI ACTGG 1 cut(s) 1212
BssAI RCCGGY 1 cut(s) 1351
BssMI GATC 7 cut(s) 93, 566, 631, 1041, 1096, 1102, 1433
Bst4CI ACNGT 5 cut(s) 575, 610, 881, 1115, 1268
BstBI TTCGAA 3 cut(s) 33, 222, 368
BstDEI CTNAG 1 cut(s) 1531
BstENI CCTNNNNNAGG 3 cut(s) 75, 411, 891
BstFNI CGCG 3 cut(s) 158, 301, 584
BstHHI GCGC 1 cut(s) 1051
BstKTI GATC 7 cut(s) 96, 569, 634, 1044, 1099, 1105, 1436
BstMAI GTCTC 2 cut(s) 36, 371
BstMBI GATC 7 cut(s) 93, 566, 631, 1041, 1096, 1102, 1433
BstNSI RCATGY 1 cut(s) 1523
BstSFI CTRYAG 2 cut(s) 877, 1083
BstUI CGCG 3 cut(s) 158, 301, 584
BstV1I GCAGC 2 cut(s) 513, 962
BstV2I GAAGAC 3 cut(s) 329, 391, 674
BstX2I RGATCY 1 cut(s) 1041
BstYI RGATCY 1 cut(s) 1041
Bsu15I ATCGAT 1 cut(s) 1540
BsuI GTATCC 1 cut(s) 1610
BsuRI GGCC 1 cut(s) 70
BsuTUI ATCGAT 1 cut(s) 1540
BtgZI GCGATG 1 cut(s) 282
BtsIMutI CAGTG 3 cut(s) 103, 606, 1310
CaiI CAGNNNCTG 2 cut(s) 449, 1559
CciI TCATGA 1 cut(s) 1099
CfoI GCGC 1 cut(s) 1051
Cfr10I RCCGGY 1 cut(s) 1351
Cfr13I GGNCC 1 cut(s) 162
ClaI ATCGAT 1 cut(s) 1540
Csp6I GTAC 4 cut(s) 303, 983, 1510, 1548
CviAII CATG 5 cut(s) 348, 1100, 1505, 1520, 1625
CviQI GTAC 4 cut(s) 303, 983, 1510, 1548
DdeI CTNAG 1 cut(s) 1531
DpnI GATC 7 cut(s) 95, 568, 633, 1043, 1098, 1104, 1435
DpnII GATC 7 cut(s) 93, 566, 631, 1041, 1096, 1102, 1433
DraI TTTAAA 1 cut(s) 286
DrdI GACNNNNNNGTC 1 cut(s) 1014
DseDI GACNNNNNNGTC 1 cut(s) 1014
Eco147I AGGCCT 1 cut(s) 70
Eco47I GGWCC 1 cut(s) 162
Eco57I CTGAAG 1 cut(s) 1397
Eco88I CYCGRG 1 cut(s) 408
EcoNI CCTNNNNNAGG 3 cut(s) 75, 411, 891
EcoRI GAATTC 2 cut(s) 370, 397
EcoT22I ATGCAT 1 cut(s) 824
FaeI CATG 5 cut(s) 351, 1103, 1508, 1523, 1628
FaqI GGGAC 1 cut(s) 1020
FatI CATG 5 cut(s) 347, 1099, 1504, 1519, 1624
FauI CCCGC 1 cut(s) 1629
FauNDI CATATG 1 cut(s) 530
FbaI TGATCA 1 cut(s) 1102
FblI GTMKAC 2 cut(s) 176, 1348
Fnu4HI GCNGC 3 cut(s) 156, 502, 976
Fsp4HI GCNGC 3 cut(s) 156, 502, 976
FspBI CTAG 3 cut(s) 699, 773, 789
GlaI GCGC 1 cut(s) 1050
GluI GCNGC 3 cut(s) 156, 502, 976
HaeIII GGCC 1 cut(s) 70
HapII CCGG 1 cut(s) 1352
HhaI GCGC 1 cut(s) 1051
Hin1II CATG 5 cut(s) 351, 1103, 1508, 1523, 1628
Hin6I GCGC 1 cut(s) 1049
HinP1I GCGC 1 cut(s) 1049
HincII GTYRAC 1 cut(s) 1710
HindII GTYRAC 1 cut(s) 1710
HindIII AAGCTT 1 cut(s) 1136
HpaI GTTAAC 1 cut(s) 1710
HpaII CCGG 1 cut(s) 1352
HphI GGTGA 2 cut(s) 431, 1428
Hpy166II GTNNAC 5 cut(s) 177, 1189, 1349, 1550, 1710
Hpy188I TCNGA 6 cut(s) 316, 376, 929, 1107, 1134, 1534
Hpy8I GTNNAC 5 cut(s) 177, 1189, 1349, 1550, 1710
HpyAV CCTTC 7 cut(s) 71, 181, 321, 656, 779, 847, 1330
HpyCH4III ACNGT 5 cut(s) 575, 610, 881, 1115, 1268
HpyCH4IV ACGT 1 cut(s) 1191
HpyCH4V TGCA 3 cut(s) 113, 822, 1271
HpyF3I CTNAG 1 cut(s) 1531
HpySE526I ACGT 1 cut(s) 1191
Hsp92II CATG 5 cut(s) 351, 1103, 1508, 1523, 1628
HspAI GCGC 1 cut(s) 1049
Ksp22I TGATCA 1 cut(s) 1102
KspAI GTTAAC 1 cut(s) 1710
Kzo9I GATC 7 cut(s) 93, 566, 631, 1041, 1096, 1102, 1433
LmnI GCTCC 2 cut(s) 498, 929
Lsp1109I GCAGC 2 cut(s) 513, 962
LweI GCATC 3 cut(s) 100, 436, 1546
MaeI CTAG 3 cut(s) 699, 773, 789
MaeII ACGT 1 cut(s) 1191
MaeIII GTNAC 4 cut(s) 122, 458, 701, 947
MalI GATC 7 cut(s) 95, 568, 633, 1043, 1098, 1104, 1435
MboI GATC 7 cut(s) 93, 566, 631, 1041, 1096, 1102, 1433
MflI RGATCY 1 cut(s) 1041
MlyI GAGTC 5 cut(s) 38, 263, 373, 944, 1565
MmeI TCCRAC 6 cut(s) 167, 503, 537, 707, 907, 1072
Mph1103I ATGCAT 1 cut(s) 824
MslI CAYNNNNRTG 1 cut(s) 895
MspI CCGG 1 cut(s) 1352
Mva1269I GAATGC 2 cut(s) 168, 504
MvnI CGCG 3 cut(s) 158, 301, 584
NdeI CATATG 1 cut(s) 530
NdeII GATC 7 cut(s) 93, 566, 631, 1041, 1096, 1102, 1433
NlaIII CATG 5 cut(s) 351, 1103, 1508, 1523, 1628
NmeAIII GCCGAG 1 cut(s) 42
NmuCI GTSAC 4 cut(s) 122, 458, 701, 947
NsiI ATGCAT 1 cut(s) 824
NspI RCATGY 1 cut(s) 1523
NspV TTCGAA 3 cut(s) 33, 222, 368
PaeR7I CTCGAG 1 cut(s) 408
PagI TCATGA 1 cut(s) 1099
PceI AGGCCT 1 cut(s) 70
PciI ACATGT 1 cut(s) 1519
PctI GAATGC 2 cut(s) 168, 504
PfeI GAWTC 7 cut(s) 4, 30, 653, 730, 785, 1243, 1608
PflMI CCANNNNNTGG 1 cut(s) 519
PkrI GCNGC 3 cut(s) 157, 503, 977
PleI GAGTC 5 cut(s) 38, 263, 373, 944, 1564
PpsI GAGTC 5 cut(s) 38, 263, 373, 944, 1564
PscI ACATGT 1 cut(s) 1519
PspPI GGNCC 1 cut(s) 162
PspXI VCTCGAGB 1 cut(s) 408
PstNI CAGNNNCTG 2 cut(s) 449, 1559
PsuI RGATCY 1 cut(s) 1041
RsaI GTAC 4 cut(s) 304, 984, 1511, 1549
RsaNI GTAC 4 cut(s) 303, 983, 1510, 1548
RseI CAYNNNNRTG 1 cut(s) 895
SatI GCNGC 3 cut(s) 156, 502, 976
Sau3AI GATC 7 cut(s) 93, 566, 631, 1041, 1096, 1102, 1433
Sau96I GGNCC 1 cut(s) 162
ScaI AGTACT 1 cut(s) 1511
SchI GAGTC 5 cut(s) 38, 263, 373, 944, 1565
SfaNI GCATC 3 cut(s) 100, 436, 1546
SfcI CTRYAG 2 cut(s) 877, 1083
Sfr274I CTCGAG 1 cut(s) 408
SfuI TTCGAA 3 cut(s) 33, 222, 368
SinI GGWCC 1 cut(s) 162
SlaI CTCGAG 1 cut(s) 408
SmiMI CAYNNNNRTG 1 cut(s) 895
SmlI CTYRAG 6 cut(s) 64, 72, 408, 911, 1427, 1586
SmoI CTYRAG 6 cut(s) 64, 72, 408, 911, 1427, 1586
SseBI AGGCCT 1 cut(s) 70
SsiI CCGC 5 cut(s) 156, 248, 584, 1238, 1622
SspMI CTAG 3 cut(s) 699, 773, 789
StuI AGGCCT 1 cut(s) 70
TaaI ACNGT 5 cut(s) 575, 610, 881, 1115, 1268
TaiI ACGT 1 cut(s) 1194
TatI WGTACW 3 cut(s) 982, 1509, 1547
TauI GCSGC 1 cut(s) 158
TfiI GAWTC 7 cut(s) 4, 30, 653, 730, 785, 1243, 1608
TscAI CASTG 3 cut(s) 103, 613, 1310
TseFI GTSAC 4 cut(s) 122, 458, 701, 947
TseI GCWGC 2 cut(s) 501, 975
Tsp45I GTSAC 4 cut(s) 122, 458, 701, 947
TspDTI ATGAA 7 cut(s) 17, 285, 329, 336, 645, 674, 1482
TspGWI ACGGA 1 cut(s) 797
TspRI CASTG 3 cut(s) 103, 613, 1310
Van91I CCANNNNNTGG 1 cut(s) 519
VpaK11BI GGWCC 1 cut(s) 162
XagI CCTNNNNNAGG 3 cut(s) 75, 411, 891
XapI RAATTY 4 cut(s) 10, 370, 397, 1290
XceI RCATGY 1 cut(s) 1523
XhoI CTCGAG 1 cut(s) 408
XmiI GTMKAC 2 cut(s) 176, 1348
XspI CTAG 3 cut(s) 699, 773, 789
ZrmI AGTACT 1 cut(s) 1511
Zsp2I ATGCAT 1 cut(s) 824
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.