AT5G44490

Leucine Rich Repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000062
Physical Location & Seq
Forward (+)
17923852 .. 17925843
1992 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G44490.2

Sequence Viewer

Length: 1446 bp
ATGGAGGAATCCGTGAAACGGTGTAGAGGTTTCTCAGATGCGAGAGAAGATTTGATGAGTAAATTAACTGACGCTTTGATATCTCAGGTACTCTTTTATCTTCCGACAAAGGAAGCTGTTAGTACTAGTGTTTTGTCCAGTAGGTGGAAAAGTGTCTGGCTTTTGATTCCTGACTTGGATTTGAACTCTAGTGCATTCCCAAGTAACAATGCATTTGTGGGTTTTATAGATAAGTTTATAGATTTCTCTAAGATAGAGAATTCATGTTTGCACAAGCTTAAGCTAAGTATTCGGAAGGAGCATGAGAATGATAACAAGTCTTGTGTCACGCGATGGATTGGTTTTGTGGCTACCCATAAACTTAAGCATCTTGATGTTGAGTGTCTTCTTTGGAAGAAAAAGTGTTTGGAAGTGATGCCATTAACCCTCTATATTACTCAGACGCTTTTTTACTTAAGACTCCATCGGGTATTGTTGGGTAATGTTGAGTCTATTTCATTACCTTGTCTCAAGACTATGCATTTAGAACAAAATGTTTATGCCAATGAGACGTGTCTAGAGTTCTTTATCTCATCTTGCCCTGTTCTTGAAGATCTGAGTATTGTTAGAAAGGTAGATGATAATGTAAAGGTTTTACGAGTGCTTTCCCAAACACTAACCAGTCTTTTTGTAGCTTTTGATTATGGTGAGCACCGTAGAGGCTTTCATGGGTATTATAGCTTAGACTTTGGAGTTTTGATTGATGCACCTAGACTAAAATATTTGAAGATCGGAGATGATATATCGCGGAGTAAAATCGTAAGCAATATGGATTCCTTAGCCAAGATTGAAATTGTTGGCCTCTTTTATATTGAACGTGCTTTTCATAACAAGGTGGCCCGTAACTTTTTCATCGGTATCTCCAGAGTTAGAGATATGATCATCTCTGACCGTGCTATGTGGTTCATGTCTTTCTACTTCTTGAGAGAAGAATCAACACCCCAGTTTTGCAACCTGTCCAGTTTGGAAGTAAAAATCTCATGGTCCCGAGGGATAAACCTGTCGATGTTTCTTGATAACTCTCCGAATCTAAAATCCATGGTCTTGGTGATTTATTGCAAAAACCTAGAGAAGTCAGTAAGTTTCTCGTCCGTGCCTCAGTGTTTGTTATCATCCCTGGAGTTTGTAGAGATAAAAATCAGCAGATTCGGCATAATCTCTCTTGGAATTGGAATAGCAAGGTTCTTTGTAGAGAACTCAGTAGTTCTCAAGAAACTTGTTGTGCATTCGAGCCGTCCCATGCGTAAGAAAAGTTTGGTTGCCTTCGAGAATCTCCTTGCATTACCGAGGCGATCTAGCATGTGTCAAATCATATCTGTTGTTGACGCCGGGTCTTGCGGTGGGGAAAATGAGAGGTGTAGTTTGGCAGCGGATGACGCCTATCTGTTAGAACCATCTGGGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

481

Amino Acids

54.86

Weight (kDa)

8.8

Isoelectric Point (pI)

44.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 110 - 280 6.6e-11 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 169 - 194 5.6e-09 Leucine Rich Repeat
FBD PF08387 376 - 420 1.7e-11 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 144
AccII CGCG 2 cut(s) 331, 787
AciI CCGC 3 cut(s) 787, 1377, 1409
AcsI RAATTY 1 cut(s) 259
AcyI GRCGYC 2 cut(s) 1365, 1416
AfaI GTAC 2 cut(s) 90, 124
AfiI CCNNNNNNNGG 2 cut(s) 18, 144
AflII CTTAAG 3 cut(s) 278, 362, 454
AflIII ACRYGT 1 cut(s) 551
AgsI TTSAA 5 cut(s) 184, 590, 766, 830, 854
AhdI GACNNNNNGTC 1 cut(s) 1369
AhlI ACTAGT 1 cut(s) 125
AjiI CACGTC 1 cut(s) 552
AjnI CCWGG 1 cut(s) 1155
AjuI GAANNNNNNNTTGG 2 cut(s) 389, 421
AluBI AGCT 5 cut(s) 116, 277, 283, 674, 720
AluI AGCT 5 cut(s) 116, 277, 283, 674, 720
Alw21I GWGCWC 1 cut(s) 693
Alw26I GTCTC 2 cut(s) 512, 542
Ama87I CYCGRG 1 cut(s) 1026
AoxI GGCC 2 cut(s) 838, 876
ApeKI GCWGC 1 cut(s) 1406
ApoI RAATTY 1 cut(s) 259
AspS9I GGNCC 2 cut(s) 877, 1023
AsuC2I CCSGG 1 cut(s) 1369
AsuHPI GGTGA 2 cut(s) 698, 1099
AvaI CYCGRG 1 cut(s) 1026
AvaII GGWCC 1 cut(s) 1023
BbsI GAAGAC 1 cut(s) 377
Bbv12I GWGCWC 1 cut(s) 693
BbvI GCAGC 1 cut(s) 1418
BccI CCATC 3 cut(s) 327, 471, 1441
BceAI ACGGC 1 cut(s) 1257
BciT130I CCWGG 1 cut(s) 1157
BclI TGATCA 1 cut(s) 918
BcnI CCSGG 1 cut(s) 1369
BcoDI GTCTC 2 cut(s) 512, 542
BcuI ACTAGT 1 cut(s) 125
BfaI CTAG 6 cut(s) 126, 189, 557, 750, 1106, 1335
BfrI CTTAAG 3 cut(s) 278, 362, 454
BglII AGATCT 1 cut(s) 592
BisI GCNGC 1 cut(s) 1407
BlsI GCNGC 1 cut(s) 1408
BmcAI AGTACT 1 cut(s) 124
Bme1390I CCNGG 2 cut(s) 1157, 1369
Bme18I GGWCC 1 cut(s) 1023
BmeRI GACNNNNNGTC 1 cut(s) 1369
BmeT110I CYCGRG 1 cut(s) 1026
BmgBI CACGTC 1 cut(s) 552
BmgT120I GGNCC 2 cut(s) 877, 1023
BmiI GGNNCC 1 cut(s) 1025
BmrFI CCNGG 2 cut(s) 1157, 1369
BmrI ACTGGG 1 cut(s) 976
BmsI GCATC 4 cut(s) 28, 376, 405, 733
BmuI ACTGGG 1 cut(s) 976
BpiI GAAGAC 1 cut(s) 377
BpmI CTGGAG 2 cut(s) 886, 1178
Bpu10I CCTNAGC 1 cut(s) 817
BpuEI CTTGAG 3 cut(s) 494, 982, 1232
BpuMI CCSGG 1 cut(s) 1369
BsaBI GATNNNNATC 1 cut(s) 1175
BsaHI GRCGYC 2 cut(s) 1365, 1416
BsaJI CCNNGG 4 cut(s) 1027, 1077, 1155, 1325
Bsc4I CCNNNNNNNGG 2 cut(s) 18, 144
Bse1I ACTGG 4 cut(s) 138, 660, 982, 999
Bse8I GATNNNNATC 1 cut(s) 1175
BseBI CCWGG 1 cut(s) 1157
BseDI CCNNGG 4 cut(s) 1027, 1077, 1155, 1325
BseGI GGATG 2 cut(s) 1151, 1417
BseJI GATNNNNATC 1 cut(s) 1175
BseLI CCNNNNNNNGG 2 cut(s) 18, 144
BseMII CTCAG 6 cut(s) 48, 98, 452, 587, 1151, 1251
BseNI ACTGG 4 cut(s) 138, 660, 982, 999
BseXI GCAGC 1 cut(s) 1418
Bsh1236I CGCG 2 cut(s) 331, 787
BshFI GGCC 2 cut(s) 840, 878
BsiHKAI GWGCWC 1 cut(s) 693
BsiHKCI CYCGRG 1 cut(s) 1026
BsiSI CCGG 1 cut(s) 1368
BslFI GGGAC 2 cut(s) 1009, 1260
BslI CCNNNNNNNGG 2 cut(s) 18, 144
BsmAI GTCTC 2 cut(s) 512, 542
BsmBI CGTCTC 1 cut(s) 542
BsmFI GGGAC 2 cut(s) 1009, 1260
BsmI GAATGC 2 cut(s) 194, 1264
BsnI GGCC 2 cut(s) 840, 878
BsoBI CYCGRG 1 cut(s) 1026
Bsp1286I GDGCHC 1 cut(s) 693
Bsp143I GATC 4 cut(s) 592, 768, 918, 1331
Bsp19I CCATGG 1 cut(s) 1077
BspACI CCGC 3 cut(s) 787, 1377, 1409
BspANI GGCC 2 cut(s) 840, 878
BspCNI CTCAG 6 cut(s) 47, 97, 451, 588, 1150, 1250
BspFNI CGCG 2 cut(s) 331, 787
BspLI GGNNCC 1 cut(s) 1025
BspTI CTTAAG 3 cut(s) 278, 362, 454
BsrI ACTGG 4 cut(s) 138, 660, 982, 999
BssECI CCNNGG 4 cut(s) 1027, 1077, 1155, 1325
BssMI GATC 4 cut(s) 592, 768, 918, 1331
BssNI GRCGYC 2 cut(s) 1365, 1416
BssT1I CCWWGG 1 cut(s) 1077
Bst2UI CCWGG 1 cut(s) 1157
Bst4CI ACNGT 3 cut(s) 21, 695, 932
BstACI GRCGYC 2 cut(s) 1365, 1416
BstAFI CTTAAG 3 cut(s) 278, 362, 454
BstDSI CCRYGG 1 cut(s) 1077
BstF5I GGATG 2 cut(s) 1151, 1417
BstFNI CGCG 2 cut(s) 331, 787
BstKTI GATC 4 cut(s) 595, 771, 921, 1334
BstMAI GTCTC 2 cut(s) 512, 542
BstMBI GATC 4 cut(s) 592, 768, 918, 1331
BstMWI GCNNNNNNNGC 2 cut(s) 1188, 1415
BstNI CCWGG 1 cut(s) 1157
BstNSI RCATGY 1 cut(s) 1342
BstSCI CCNGG 2 cut(s) 1155, 1367
BstUI CGCG 2 cut(s) 331, 787
BstV1I GCAGC 1 cut(s) 1418
BstV2I GAAGAC 1 cut(s) 377
BstX2I RGATCY 1 cut(s) 592
BstXI CCANNNNNNTGG 1 cut(s) 1084
BstYI RGATCY 1 cut(s) 592
BsuRI GGCC 2 cut(s) 840, 878
BtgI CCRYGG 1 cut(s) 1077
BtgZI GCGATG 1 cut(s) 346
BtrI CACGTC 1 cut(s) 552
BtsCI GGATG 2 cut(s) 1151, 1417
BtsIMutI CAGTG 1 cut(s) 1145
Cfr13I GGNCC 2 cut(s) 877, 1023
CseI GACGC 4 cut(s) 80, 451, 1373, 1424
Csp6I GTAC 2 cut(s) 89, 123
CviAII CATG 8 cut(s) 264, 302, 707, 946, 1020, 1078, 1279, 1339
CviQI GTAC 2 cut(s) 89, 123
DpnI GATC 4 cut(s) 594, 770, 920, 1333
DpnII GATC 4 cut(s) 592, 768, 918, 1331
DriI GACNNNNNGTC 1 cut(s) 1369
Eam1105I GACNNNNNGTC 1 cut(s) 1369
Eco130I CCWWGG 1 cut(s) 1077
Eco32I GATATC 1 cut(s) 81
Eco47I GGWCC 1 cut(s) 1023
Eco88I CYCGRG 1 cut(s) 1026
EcoRI GAATTC 1 cut(s) 259
EcoRII CCWGG 1 cut(s) 1155
EcoRV GATATC 1 cut(s) 81
EcoT14I CCWWGG 1 cut(s) 1077
EcoT22I ATGCAT 2 cut(s) 214, 522
ErhI CCWWGG 1 cut(s) 1077
Esp3I CGTCTC 1 cut(s) 542
FaeI CATG 8 cut(s) 267, 305, 710, 949, 1023, 1081, 1282, 1342
FaqI GGGAC 2 cut(s) 1009, 1260
FatI CATG 8 cut(s) 263, 301, 706, 945, 1019, 1077, 1278, 1338
FbaI TGATCA 1 cut(s) 918
Fnu4HI GCNGC 1 cut(s) 1407
FokI GGATG 2 cut(s) 1138, 1424
Fsp4HI GCNGC 1 cut(s) 1407
FspBI CTAG 6 cut(s) 126, 189, 557, 750, 1106, 1335
GluI GCNGC 1 cut(s) 1407
GsuI CTGGAG 2 cut(s) 886, 1178
HaeIII GGCC 2 cut(s) 840, 878
HapII CCGG 1 cut(s) 1368
HgaI GACGC 4 cut(s) 80, 451, 1373, 1424
Hin1I GRCGYC 2 cut(s) 1365, 1416
Hin1II CATG 8 cut(s) 267, 305, 710, 949, 1023, 1081, 1282, 1342
HincII GTYRAC 1 cut(s) 1363
HindII GTYRAC 1 cut(s) 1363
HindIII AAGCTT 1 cut(s) 275
HinfI GANTC 9 cut(s) 8, 166, 459, 488, 812, 971, 1066, 1185, 1309
HpaII CCGG 1 cut(s) 1368
HphI GGTGA 2 cut(s) 698, 1099
Hpy166II GTNNAC 1 cut(s) 1363
Hpy188I TCNGA 8 cut(s) 37, 105, 294, 441, 597, 773, 928, 1065
Hpy8I GTNNAC 1 cut(s) 1363
HpyAV CCTTC 2 cut(s) 289, 1312
HpyCH4III ACNGT 3 cut(s) 21, 695, 932
HpyCH4IV ACGT 2 cut(s) 551, 856
HpyCH4V TGCA 9 cut(s) 194, 212, 271, 520, 746, 990, 1098, 1264, 1319
HpyF10VI GCNNNNNNNGC 2 cut(s) 1188, 1415
HpySE526I ACGT 2 cut(s) 551, 856
Hsp92I GRCGYC 2 cut(s) 1365, 1416
Hsp92II CATG 8 cut(s) 267, 305, 710, 949, 1023, 1081, 1282, 1342
Ksp22I TGATCA 1 cut(s) 918
Kzo9I GATC 4 cut(s) 592, 768, 918, 1331
LmnI GCTCC 1 cut(s) 298
Lsp1109I GCAGC 1 cut(s) 1418
LweI GCATC 4 cut(s) 28, 376, 405, 733
MaeI CTAG 6 cut(s) 126, 189, 557, 750, 1106, 1335
MaeII ACGT 2 cut(s) 551, 856
MaeIII GTNAC 3 cut(s) 203, 325, 881
MalI GATC 4 cut(s) 594, 770, 920, 1333
MboI GATC 4 cut(s) 592, 768, 918, 1331
MboII GAAGA 7 cut(s) 59, 92, 377, 406, 602, 778, 980
MflI RGATCY 1 cut(s) 592
MhlI GDGCHC 1 cut(s) 693
MluCI AATT 4 cut(s) 62, 259, 831, 1206
MlyI GAGTC 2 cut(s) 453, 497
MmeI TCCRAC 1 cut(s) 128
MnlI CCTC 9 cut(s) 20, 437, 692, 851, 1022, 1146, 1320, 1386, 1434
Mph1103I ATGCAT 2 cut(s) 214, 522
MseI TTAA 5 cut(s) 65, 279, 363, 422, 455
MslI CAYNNNNRTG 2 cut(s) 306, 372
MspA1I CMGCKG 1 cut(s) 1409
MspCI CTTAAG 3 cut(s) 278, 362, 454
MspI CCGG 1 cut(s) 1368
MspR9I CCNGG 2 cut(s) 1157, 1369
Mva1269I GAATGC 2 cut(s) 194, 1264
MvaI CCWGG 1 cut(s) 1157
MvnI CGCG 2 cut(s) 331, 787
MwoI GCNNNNNNNGC 2 cut(s) 1188, 1415
NciI CCSGG 1 cut(s) 1369
NcoI CCATGG 1 cut(s) 1077
NdeII GATC 4 cut(s) 592, 768, 918, 1331
NlaIII CATG 8 cut(s) 267, 305, 710, 949, 1023, 1081, 1282, 1342
NlaIV GGNNCC 1 cut(s) 1025
NmuCI GTSAC 1 cut(s) 325
NsiI ATGCAT 2 cut(s) 214, 522
NspI RCATGY 1 cut(s) 1342
PctI GAATGC 2 cut(s) 194, 1264
PfeI GAWTC 7 cut(s) 8, 166, 812, 971, 1066, 1185, 1309
PflMI CCANNNNNTGG 1 cut(s) 144
PkrI GCNGC 1 cut(s) 1408
PleI GAGTC 2 cut(s) 453, 496
PpsI GAGTC 2 cut(s) 453, 496
Psp6I CCWGG 1 cut(s) 1155
PspGI CCWGG 1 cut(s) 1155
PspN4I GGNNCC 1 cut(s) 1025
PspPI GGNCC 2 cut(s) 877, 1023
PsuI RGATCY 1 cut(s) 592
RsaI GTAC 2 cut(s) 90, 124
RsaNI GTAC 2 cut(s) 89, 123
RseI CAYNNNNRTG 2 cut(s) 306, 372
SaqAI TTAA 5 cut(s) 65, 279, 363, 422, 455
SatI GCNGC 1 cut(s) 1407
Sau3AI GATC 4 cut(s) 592, 768, 918, 1331
Sau96I GGNCC 2 cut(s) 877, 1023
ScaI AGTACT 1 cut(s) 124
SchI GAGTC 2 cut(s) 453, 497
ScrFI CCNGG 2 cut(s) 1157, 1369
SduI GDGCHC 1 cut(s) 693
SfaNI GCATC 4 cut(s) 28, 376, 405, 733
SinI GGWCC 1 cut(s) 1023
SmiMI CAYNNNNRTG 2 cut(s) 306, 372
SmlI CTYRAG 6 cut(s) 278, 362, 454, 509, 961, 1247
SmoI CTYRAG 6 cut(s) 278, 362, 454, 509, 961, 1247
SpeI ACTAGT 1 cut(s) 125
Sse9I AATT 4 cut(s) 62, 259, 831, 1206
SsiI CCGC 3 cut(s) 787, 1377, 1409
SspI AATATT 1 cut(s) 761
SspMI CTAG 6 cut(s) 126, 189, 557, 750, 1106, 1335
StyD4I CCNGG 2 cut(s) 1155, 1367
StyI CCWWGG 1 cut(s) 1077
TaaI ACNGT 3 cut(s) 21, 695, 932
TaiI ACGT 2 cut(s) 554, 859
TaqI TCGA 3 cut(s) 1043, 1268, 1305
TasI AATT 4 cut(s) 62, 259, 831, 1206
TatI WGTACW 1 cut(s) 122
TfiI GAWTC 7 cut(s) 8, 166, 812, 971, 1066, 1185, 1309
Tru1I TTAA 5 cut(s) 65, 279, 363, 422, 455
Tru9I TTAA 5 cut(s) 65, 279, 363, 422, 455
TscAI CASTG 1 cut(s) 1145
TseFI GTSAC 1 cut(s) 325
TseI GCWGC 1 cut(s) 1406
Tsp45I GTSAC 1 cut(s) 325
TspDTI ATGAA 6 cut(s) 252, 486, 695, 854, 880, 934
TspGWI ACGGA 1 cut(s) 1120
TspRI CASTG 1 cut(s) 1145
Van91I CCANNNNNTGG 1 cut(s) 144
Vha464I CTTAAG 3 cut(s) 278, 362, 454
VpaK11BI GGWCC 1 cut(s) 1023
XapI RAATTY 1 cut(s) 259
XbaI TCTAGA 1 cut(s) 556
XceI RCATGY 1 cut(s) 1342
XspI CTAG 6 cut(s) 126, 189, 557, 750, 1106, 1335
ZrmI AGTACT 1 cut(s) 124
Zsp2I ATGCAT 2 cut(s) 214, 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.