Rmu_sc0006771.1_g000004

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006771.1
OG0000062
Physical Location & Seq
Reverse (-)
13183 .. 17907
4725 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006771.1_g000004.1.cds

Sequence Viewer

Length: 2409 bp
atgtactcttcttccgtgactccaacagacattcataagtttcgtctccattccattagtgttgaggattttgatcgtatttgtggttggattggcgctgccattaggcgcaatgttgttgaacttgatctttctgttaagtattatggaggtgatgaggatcaccagcagatctttaagttgcctaagagtgttttcacatgtaaaactttgagggttttgaacttgtggtcaaattttattatcaatgctcctgaatcagggtgtttcccgaatctcaagtctctctatgttcattttgatcatcctgtcaataactcaatggagaaactttttgcttgctgccctgtgctggaagatttgagcatacatggaaatcgtggattttatggagatgaggtcgttttgaatttcaccatatctgcacccgaactgaaaacactgaaagtacaatggacgacgcatggtgattatgagaggtgcaacttttatgttgttgccccaaagcttgaaaattttcatctctggcagtatccttcaacagactgttttttggagaatgcaaaatctctagtcagagttactatttctgtacaagaccactttgccaatgaagaccgtctctttgctatccgtggaactgcgcttctggcagtaatttccaatgttagatacttgtctctttcagcacattgtttgaaaggttgctgtcttcctgtctttgataagttgagccgattggagcttgctctctacagttgctattactgggaactgctaaaagagcttctcaggagatcacctatactggaatatcttgtcttagagctgaaagacttcatatgctccacggcaccttcgagtcatcaatggagtccaccagagtcgatacctatctgtttgttgacgcatctcaagactgtctctataaggggattcaagggaaaactggatgagatggatgtggcaaagtatttgttaaacaacggtggagttttgaagaggatgactttttatagtgaggatcttttgcgtaccaaagaggagttaaaaatggagttgtcaatgtgtcaatggggttcaaagacttgccaagttgaattttgcccggaccaaaaagacgaagtcttgtcatttttagtactaaaacataatgttgaaatcttctttgaagtttcgacagttaccatggatttcaatctggttacaggtttgatgtcagagcttgaagcaaaaagagttaaagatagaatcagtgcattaccggatgcagtcctttgtcacatcctttcattccttgatagaacagaagatgctgtgacgaccagcgttttgtccaaaagatggaagaaaatctgggcctctgtacccagtcttgtcttttgcgatgaagataacccggactgtgtttcttttgtgaggtttgttgataatgtactcttctttcgcaactcaacagacattcgaaagttccttcttcagtcttgctgtgttaaggatttcgctcgtatttatggttggattggcactgccataaggcgtaatgttgttgaactcgatctttctgtagaggattttgcaggtgatgatgatcaccctcgggtttttgagttgcctgagagtgttttcacatgcaaaacactgatggttttggtgctatcttcaaactttattaccaatcctcccgcttcagggtgtttcccaagcctcaagtctctcaatgtgcagattgaccatccagtcaataaatctgtggagaagcttttttcttgctgccccgtactggaaaatttgcgtataggtggatcacatggaatgcaaagagacgatccgattttgaattttaatgtctctgcgcctgaattgaagacattaagaatatattggtgttcatatgatgtttatgagaagtgctgcaagtttcatattaatgccccgaagcttgaaaactttcattttggcaggatcctcctacagattgttttttggagaattcaaaaacaagcagatcatcgctttgctatcggtggaactgcgcttctggcaggaatttctagtgctaggtccttgtatctttcagcacatcgtttgaaagaatgcaagtgtggagaatcctcggatcatcaatggatgccaccacagttcgtgccaagttgtttgctgtcacaacttaagactatctctataaggggattcaagggcaaactagatgagatggatgtggcaaggtatttgctggaaaatggggaagttttgaagaagatgactatttactataatgatcatctgtgcttgaaagaagagttacacaagcaattctcaatgtttcagtggggttcagagacttgtcaagttgaacttttctcagacataagagaagcaaatcgtgcttctttaggtatattctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

802

Amino Acids

91.93

Weight (kDa)

6.48

Isoelectric Point (pI)

37.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1571
AasI GACNNNNNNGTC 1 cut(s) 1739
Acc36I ACCTGC 1 cut(s) 1571
AccB1I GGYRCC 1 cut(s) 853
AccB7I CCANNNNNTGG 1 cut(s) 1344
AciI CCGC 1 cut(s) 1686
AclWI GGATC 7 cut(s) 168, 1032, 1813, 1823, 1960, 1973, 2127
AcsI RAATTY 8 cut(s) 235, 409, 514, 1100, 1789, 1840, 1992, 2049
AcuI CTGAAG 2 cut(s) 1463, 1674
AfaI GTAC 8 cut(s) 5, 450, 594, 1036, 1143, 1368, 1437, 1782
AfiI CCNNNNNNNGG 6 cut(s) 260, 352, 1344, 1691, 1692, 1783
AflII CTTAAG 1 cut(s) 2171
AflIII ACRYGT 1 cut(s) 200
AluBI AGCT 7 cut(s) 508, 745, 787, 829, 1225, 1762, 1942
AluI AGCT 7 cut(s) 508, 745, 787, 829, 1225, 1762, 1942
Alw26I GTCTC 9 cut(s) 50, 288, 626, 684, 928, 1719, 1818, 1855, 2336
AlwI GGATC 7 cut(s) 168, 1032, 1813, 1823, 1960, 1973, 2127
Ama87I CYCGRG 1 cut(s) 1599
AoxI GGCC 1 cut(s) 1359
ApeKI GCWGC 4 cut(s) 98, 342, 1773, 1914
ApoI RAATTY 8 cut(s) 235, 409, 514, 1100, 1789, 1840, 1992, 2049
ArsI GACNNNNNNTTYG 6 cut(s) 266, 298, 608, 640, 1315, 1347
AseI ATTAAT 1 cut(s) 1929
Asp700I GAANNNNTTC 3 cut(s) 516, 836, 1950
AspLEI GCGC 5 cut(s) 98, 111, 646, 1858, 2038
AspS9I GGNCC 3 cut(s) 1111, 1359, 2064
AsuC2I CCSGG 2 cut(s) 1109, 1400
AsuHPI GGTGA 7 cut(s) 155, 164, 406, 479, 792, 1586, 1595
AsuII TTCGAA 1 cut(s) 1465
AvaI CYCGRG 1 cut(s) 1599
AvaII GGWCC 2 cut(s) 1111, 2064
BamHI GGATCC 1 cut(s) 1965
BanI GGYRCC 1 cut(s) 853
BbsI GAAGAC 3 cut(s) 621, 704, 1874
BbvI GCAGC 4 cut(s) 85, 329, 1760, 1901
BccI CCATC 5 cut(s) 952, 1338, 1639, 1743, 2209
BceAI ACGGC 1 cut(s) 867
BciVI GTATCC 1 cut(s) 543
BclI TGATCA 3 cut(s) 301, 1591, 2281
BcnI CCSGG 2 cut(s) 1109, 1400
BcoDI GTCTC 9 cut(s) 50, 288, 626, 684, 928, 1719, 1818, 1855, 2336
BfaI CTAG 5 cut(s) 572, 2055, 2061, 2207, 2407
BfmI CTRYAG 3 cut(s) 754, 1566, 1973
BfoI RGCGCY 1 cut(s) 99
BfrI CTTAAG 1 cut(s) 2171
BfuAI ACCTGC 1 cut(s) 1571
BfuI GTATCC 1 cut(s) 543
BglII AGATCT 1 cut(s) 171
BisI GCNGC 4 cut(s) 99, 343, 1774, 1915
BlsI GCNGC 4 cut(s) 100, 344, 1775, 1916
BmcAI AGTACT 1 cut(s) 1143
Bme1390I CCNGG 2 cut(s) 1109, 1400
Bme18I GGWCC 2 cut(s) 1111, 2064
BmeT110I CYCGRG 1 cut(s) 1599
BmgT120I GGNCC 3 cut(s) 1111, 1359, 2064
BmiI GGNNCC 2 cut(s) 855, 1967
BmrFI CCNGG 2 cut(s) 1109, 1400
BmrI ACTGGG 2 cut(s) 778, 1365
BmsI GCATC 4 cut(s) 919, 1258, 1303, 2121
BmuI ACTGGG 2 cut(s) 778, 1365
BpiI GAAGAC 3 cut(s) 621, 704, 1874
Bpu14I TTCGAA 1 cut(s) 1465
BpuEI CTTGAG 3 cut(s) 263, 899, 1694
BpuMI CCSGG 2 cut(s) 1109, 1400
BsaBI GATNNNNATC 5 cut(s) 72, 159, 893, 1197, 1590
BsaJI CCNNGG 5 cut(s) 634, 849, 1188, 1598, 2115
BsaWI WCCGGW 1 cut(s) 1264
BsaXI ACNNNNNCTCC 4 cut(s) 384, 414, 1666, 1696
Bsc4I CCNNNNNNNGG 6 cut(s) 260, 352, 1344, 1691, 1692, 1783
Bse1I ACTGG 6 cut(s) 773, 813, 954, 1371, 1739, 1788
Bse3DI GCAATG 1 cut(s) 118
Bse8I GATNNNNATC 5 cut(s) 72, 159, 893, 1197, 1590
BseDI CCNNGG 5 cut(s) 634, 849, 1188, 1598, 2115
BseGI GGATG 9 cut(s) 304, 958, 967, 1011, 1273, 1284, 1735, 2136, 2224
BseJI GATNNNNATC 5 cut(s) 72, 159, 893, 1197, 1590
BseLI CCNNNNNNNGG 6 cut(s) 260, 352, 1344, 1691, 1692, 1783
BseMI GCAATG 1 cut(s) 118
BseMII CTCAG 3 cut(s) 805, 1608, 2379
BseNI ACTGG 6 cut(s) 773, 813, 954, 1371, 1739, 1788
BseRI GAGGAG 1 cut(s) 1058
BseXI GCAGC 4 cut(s) 85, 329, 1760, 1901
BsgI GTGCAG 2 cut(s) 408, 1745
BshFI GGCC 1 cut(s) 1361
BshNI GGYRCC 1 cut(s) 853
BsiHKCI CYCGRG 1 cut(s) 1599
BsiSI CCGG 3 cut(s) 1109, 1265, 1400
BslI CCNNNNNNNGG 6 cut(s) 260, 352, 1344, 1691, 1692, 1783
BsmAI GTCTC 9 cut(s) 50, 288, 626, 684, 928, 1719, 1818, 1855, 2336
BsmBI CGTCTC 3 cut(s) 50, 626, 1818
BsmI GAATGC 3 cut(s) 565, 1821, 2102
BsnI GGCC 1 cut(s) 1361
BsoBI CYCGRG 1 cut(s) 1599
Bsp119I TTCGAA 1 cut(s) 1465
Bsp1407I TGTACA 1 cut(s) 592
Bsp19I CCATGG 1 cut(s) 1188
BspACI CCGC 1 cut(s) 1686
BspANI GGCC 1 cut(s) 1361
BspCNI CTCAG 3 cut(s) 804, 1609, 2378
BspLI GGNNCC 2 cut(s) 855, 1967
BspMI ACCTGC 1 cut(s) 1571
BspPI GGATC 7 cut(s) 168, 1032, 1813, 1823, 1960, 1973, 2127
BspT104I TTCGAA 1 cut(s) 1465
BspT107I GGYRCC 1 cut(s) 853
BspTI CTTAAG 1 cut(s) 2171
BsrDI GCAATG 1 cut(s) 118
BsrGI TGTACA 1 cut(s) 592
BsrI ACTGG 6 cut(s) 773, 813, 954, 1371, 1739, 1788
BssECI CCNNGG 5 cut(s) 634, 849, 1188, 1598, 2115
BssT1I CCWWGG 1 cut(s) 1188
Bst4CI ACNGT 8 cut(s) 548, 620, 758, 922, 989, 1183, 1406, 2142
Bst6I CTCTTC 4 cut(s) 13, 995, 1445, 2295
BstAFI CTTAAG 1 cut(s) 2171
BstAPI GCANNNNNTGC 1 cut(s) 2387
BstAUI TGTACA 1 cut(s) 592
BstBI TTCGAA 1 cut(s) 1465
BstC8I GCNNGC 2 cut(s) 340, 747
BstDEI CTNAG 5 cut(s) 186, 791, 823, 1617, 2365
BstDSI CCRYGG 3 cut(s) 634, 849, 1188
BstENI CCTNNNNNAGG 1 cut(s) 258
BstF5I GGATG 9 cut(s) 304, 958, 967, 1011, 1273, 1284, 1735, 2136, 2224
BstH2I RGCGCY 1 cut(s) 99
BstHHI GCGC 5 cut(s) 98, 111, 646, 1858, 2038
BstMAI GTCTC 9 cut(s) 50, 288, 626, 684, 928, 1719, 1818, 1855, 2336
BstMWI GCNNNNNNNGC 4 cut(s) 650, 784, 2042, 2387
BstNSI RCATGY 2 cut(s) 204, 1635
BstSCI CCNGG 2 cut(s) 1107, 1398
BstSFI CTRYAG 3 cut(s) 754, 1566, 1973
BstV1I GCAGC 4 cut(s) 85, 329, 1760, 1901
BstV2I GAAGAC 3 cut(s) 621, 704, 1874
BstX2I RGATCY 3 cut(s) 171, 1024, 1965
BstYI RGATCY 3 cut(s) 171, 1024, 1965
BsuI GTATCC 1 cut(s) 543
BsuRI GGCC 1 cut(s) 1361
BtgI CCRYGG 3 cut(s) 634, 849, 1188
BtgZI GCGATG 2 cut(s) 1401, 1997
BtsCI GGATG 9 cut(s) 304, 958, 967, 1011, 1273, 1284, 1735, 2136, 2224
BtsI GCAGTG 1 cut(s) 1527
BtsIMutI CAGTG 5 cut(s) 440, 1261, 1527, 1640, 2336
BveI ACCTGC 1 cut(s) 1571
Cac8I GCNNGC 2 cut(s) 340, 747
CfoI GCGC 5 cut(s) 98, 111, 646, 1858, 2038
Cfr13I GGNCC 3 cut(s) 1111, 1359, 2064
CseI GACGC 2 cut(s) 469, 916
Csp6I GTAC 8 cut(s) 4, 449, 593, 1035, 1142, 1367, 1436, 1781
CviAII CATG 6 cut(s) 201, 371, 464, 1189, 1632, 1811
CviQI GTAC 8 cut(s) 4, 449, 593, 1035, 1142, 1367, 1436, 1781
DdeI CTNAG 5 cut(s) 186, 791, 823, 1617, 2365
DrdI GACNNNNNNGTC 1 cut(s) 1739
DseDI GACNNNNNNGTC 1 cut(s) 1739
Eam1104I CTCTTC 4 cut(s) 13, 995, 1445, 2295
EarI CTCTTC 4 cut(s) 13, 995, 1445, 2295
Eco130I CCWWGG 1 cut(s) 1188
Eco47I GGWCC 2 cut(s) 1111, 2064
Eco57I CTGAAG 2 cut(s) 1463, 1674
Eco88I CYCGRG 1 cut(s) 1599
EcoNI CCTNNNNNAGG 1 cut(s) 258
EcoO109I RGGNCCY 1 cut(s) 2064
EcoRI GAATTC 1 cut(s) 1992
EcoT14I CCWWGG 1 cut(s) 1188
ErhI CCWWGG 1 cut(s) 1188
Esp3I CGTCTC 3 cut(s) 50, 626, 1818
FaeI CATG 6 cut(s) 204, 374, 467, 1192, 1635, 1814
FalI AAGNNNNNCTT 2 cut(s) 2343, 2375
FatI CATG 6 cut(s) 200, 370, 463, 1188, 1631, 1810
FauI CCCGC 1 cut(s) 1693
FauNDI CATATG 2 cut(s) 842, 1894
FbaI TGATCA 3 cut(s) 301, 1591, 2281
Fnu4HI GCNGC 4 cut(s) 99, 343, 1774, 1915
FokI GGATG 9 cut(s) 291, 965, 974, 1018, 1271, 1280, 1722, 2143, 2231
Fsp4HI GCNGC 4 cut(s) 99, 343, 1774, 1915
FspBI CTAG 5 cut(s) 572, 2055, 2061, 2207, 2407
GlaI GCGC 5 cut(s) 97, 110, 645, 1857, 2037
GluI GCNGC 4 cut(s) 99, 343, 1774, 1915
HaeII RGCGCY 1 cut(s) 99
HaeIII GGCC 1 cut(s) 1361
HapII CCGG 3 cut(s) 1109, 1265, 1400
HgaI GACGC 2 cut(s) 469, 916
HhaI GCGC 5 cut(s) 98, 111, 646, 1858, 2038
Hin1II CATG 6 cut(s) 204, 374, 467, 1192, 1635, 1814
Hin6I GCGC 5 cut(s) 96, 109, 644, 1856, 2036
HinP1I GCGC 5 cut(s) 96, 109, 644, 1856, 2036
HincII GTYRAC 1 cut(s) 906
HindII GTYRAC 1 cut(s) 906
HindIII AAGCTT 3 cut(s) 506, 1760, 1940
HpaII CCGG 3 cut(s) 1109, 1265, 1400
HphI GGTGA 7 cut(s) 155, 164, 406, 479, 792, 1586, 1595
Hpy166II GTNNAC 2 cut(s) 878, 906
Hpy188I TCNGA 6 cut(s) 578, 1222, 1833, 2119, 2341, 2368
Hpy188III TCNNGA 4 cut(s) 254, 271, 793, 916
Hpy8I GTNNAC 2 cut(s) 878, 906
Hpy99I CGWCG 1 cut(s) 463
HpyAV CCTTC 3 cut(s) 546, 867, 1484
HpyCH4III ACNGT 8 cut(s) 548, 620, 758, 922, 989, 1183, 1406, 2142
HpyF10VI GCNNNNNNNGC 4 cut(s) 650, 784, 2042, 2387
HpyF3I CTNAG 5 cut(s) 186, 791, 823, 1617, 2365
Hsp92II CATG 6 cut(s) 204, 374, 467, 1192, 1635, 1814
HspAI GCGC 5 cut(s) 96, 109, 644, 1856, 2036
Ksp22I TGATCA 3 cut(s) 301, 1591, 2281
LmnI GCTCC 3 cut(s) 256, 742, 851
Lsp1109I GCAGC 4 cut(s) 85, 329, 1760, 1901
LweI GCATC 4 cut(s) 919, 1258, 1303, 2121
MaeI CTAG 5 cut(s) 572, 2055, 2061, 2207, 2407
MaeIII GTNAC 8 cut(s) 16, 580, 1183, 1204, 1280, 1318, 2163, 2304
MflI RGATCY 3 cut(s) 171, 1024, 1965
MlyI GAGTC 4 cut(s) 13, 871, 883, 893
MmeI TCCRAC 3 cut(s) 47, 68, 1499
MroXI GAANNNNTTC 3 cut(s) 516, 836, 1950
MslI CAYNNNNRTG 1 cut(s) 1929
MspCI CTTAAG 1 cut(s) 2171
MspI CCGG 3 cut(s) 1109, 1265, 1400
MspR9I CCNGG 2 cut(s) 1109, 1400
Mva1269I GAATGC 3 cut(s) 565, 1821, 2102
MwoI GCNNNNNNNGC 4 cut(s) 650, 784, 2042, 2387
NciI CCSGG 2 cut(s) 1109, 1400
NcoI CCATGG 1 cut(s) 1188
NdeI CATATG 2 cut(s) 842, 1894
NlaIII CATG 6 cut(s) 204, 374, 467, 1192, 1635, 1814
NlaIV GGNNCC 2 cut(s) 855, 1967
NmuCI GTSAC 4 cut(s) 16, 1280, 1318, 2163
NspI RCATGY 2 cut(s) 204, 1635
NspV TTCGAA 1 cut(s) 1465
PaqCI CACCTGC 1 cut(s) 1571
PciI ACATGT 1 cut(s) 200
PcsI WCGNNNNNNNCGW 1 cut(s) 857
PctI GAATGC 3 cut(s) 565, 1821, 2102
PdmI GAANNNNTTC 3 cut(s) 516, 836, 1950
PfeI GAWTC 6 cut(s) 257, 274, 936, 1251, 2111, 2193
PflFI GACNNNGTC 1 cut(s) 1124
PflMI CCANNNNNTGG 1 cut(s) 1344
PkrI GCNGC 4 cut(s) 100, 344, 1775, 1916
PleI GAGTC 4 cut(s) 13, 870, 882, 892
PpsI GAGTC 4 cut(s) 13, 870, 882, 892
PpuMI RGGWCCY 1 cut(s) 2064
PscI ACATGT 1 cut(s) 200
PshBI ATTAAT 1 cut(s) 1929
Psp5II RGGWCCY 1 cut(s) 2064
PspN4I GGNNCC 2 cut(s) 855, 1967
PspPI GGNCC 3 cut(s) 1111, 1359, 2064
PspPPI RGGWCCY 1 cut(s) 2064
PsuI RGATCY 3 cut(s) 171, 1024, 1965
PsyI GACNNNGTC 1 cut(s) 1124
RsaI GTAC 8 cut(s) 5, 450, 594, 1036, 1143, 1368, 1437, 1782
RsaNI GTAC 8 cut(s) 4, 449, 593, 1035, 1142, 1367, 1436, 1781
RseI CAYNNNNRTG 1 cut(s) 1929
SatI GCNGC 4 cut(s) 99, 343, 1774, 1915
Sau96I GGNCC 3 cut(s) 1111, 1359, 2064
ScaI AGTACT 1 cut(s) 1143
SchI GAGTC 4 cut(s) 13, 871, 883, 893
ScrFI CCNGG 2 cut(s) 1109, 1400
SfaNI GCATC 4 cut(s) 919, 1258, 1303, 2121
SfcI CTRYAG 3 cut(s) 754, 1566, 1973
SfuI TTCGAA 1 cut(s) 1465
SinI GGWCC 2 cut(s) 1111, 2064
SmiMI CAYNNNNRTG 1 cut(s) 1929
SmlI CTYRAG 4 cut(s) 278, 914, 1709, 2171
SmoI CTYRAG 4 cut(s) 278, 914, 1709, 2171
SsiI CCGC 1 cut(s) 1686
SspMI CTAG 5 cut(s) 572, 2055, 2061, 2207, 2407
StyD4I CCNGG 2 cut(s) 1107, 1398
StyI CCWWGG 1 cut(s) 1188
TaaI ACNGT 8 cut(s) 548, 620, 758, 922, 989, 1183, 1406, 2142
TaqI TCGA 5 cut(s) 860, 887, 1178, 1465, 1557
TatI WGTACW 5 cut(s) 3, 448, 592, 1141, 1435
TfiI GAWTC 6 cut(s) 257, 274, 936, 1251, 2111, 2193
TscAI CASTG 5 cut(s) 447, 1261, 1534, 1647, 2336
TseFI GTSAC 4 cut(s) 16, 1280, 1318, 2163
TseI GCWGC 4 cut(s) 98, 342, 1773, 1914
Tsp45I GTSAC 4 cut(s) 16, 1280, 1318, 2163
TspGWI ACGGA 2 cut(s) 4, 623
TspRI CASTG 5 cut(s) 447, 1261, 1534, 1647, 2336
Tth111I GACNNNGTC 1 cut(s) 1124
Van91I CCANNNNNTGG 1 cut(s) 1344
Vha464I CTTAAG 1 cut(s) 2171
VpaK11BI GGWCC 2 cut(s) 1111, 2064
VspI ATTAAT 1 cut(s) 1929
XagI CCTNNNNNAGG 1 cut(s) 258
XapI RAATTY 8 cut(s) 235, 409, 514, 1100, 1789, 1840, 1992, 2049
XceI RCATGY 2 cut(s) 204, 1635
XmnI GAANNNNTTC 3 cut(s) 516, 836, 1950
XspI CTAG 5 cut(s) 572, 2055, 2061, 2207, 2407
ZrmI AGTACT 1 cut(s) 1143
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.