FvH4_1g09890

domain in FBox and BRCT domain containing plant proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000062
Physical Location & Seq
Reverse (-)
5371024 .. 5376399
5376 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g09890.t1

Sequence Viewer

Length: 1536 bp
ATGCATAATCTTGTTGAACTCGATCTTTGTGTAACAAATCTATCAGGTGTCGACGAGAATTATGAGTTGCCTAAAAGCCTTTTCAAGTGCAAAACACTTGTTGTTTTGAAGTTAAGGTCTCATATTATCATCAATACTCCTGATGATTCATGGTGTTTGCCGCGTCTCAAAGTTCTATTTATAGAAACTGATCCTGTTAATAACCTGATGGAAAAGCTTCTGGATGGCTGCCCTGCACTTGAAGTGTTGGCTGTAACTGGACATGTGCGGGTAGAAGATTTAGATTTCAACATCTCTGCGCTTGAACTTAAGAAGTTAACAATCCATCTTGTCACAAGATATAGGTTGGATGAGTATGTTGGTCTCCTTAATCTTAATGTTTCTGTTAGAGCTCCAAAGCTCGAATACTTTCATCTCCAGCAGAGTGTGTTGTCAAGCTTTGTTTTGGAGAATTCAAAGTCTTTAGTCAAAGCCACTATTGATCTCACACACCACGGAGCAGCTAAACATCCTACATTTGCTAGCCGTGCGACCGCGCTTTTGGCACAGATTTGTCATGTCAAGTCTTTGTCCCTTTCATCACATAATTTGGATGAGATTTGTGATCTGCCTATTTTCGGTAATTTAAACCAATTGAAGCTGCATCTTCATCGTTGCTGTTCTTGGTGGTTAGAGTTGCTGAAGAGATCACCAAATCTAGAATCTCTCGTAATAGAACACGTCGGACACAATTGTCGTGGACCAGTATATTTTGTTAAACACGTAAAGCCACTTTGGCATCCTCCCGAGTTGGTCCCGAATTGTCTATTGTCACACGTCAAGACTATCTGTATCATAGGATTCGGGGGAAAGGACGATGAGTTTAAAATTGCAAAATATCTGTTGAAGAATGGTGAAGTTTTGAATAGCATGAAAATTTATACAGATGGTGATTTGTGTGCAAAGAAGTTGGAGAAACTTTCAATGTTTGAAAGGGGTTCCAAGACATACCCCATTGAAATCCAGAAAGCTTCAAAGTTAAATGGCTCACCCCATCATGATAGAGATTCAACTCATGGCTTCCGAACACATCCATTAAAAAGCTTCAGCAGGAGAATCAACCTGAGCAGCCTTCTACGCCTGTTAAACTTTTTGAACAGTGGGGAACGCAGTCAGAGCATACACCTATCAGAGGCTGGCCTGGCTCCAAATAAAGTTAGAGGCTTTGGTCTGTTTTATGGTCCTGATTTCACTGAGGACTTTCTTAACAAGTTTCAGCTCAAGGTTAGAGCCGAAATCCAGAAAGCCAAGCTTGAAATGTTGGTTCAGCTTAAAAGAATGCAAACAGAAGATGAGATAATTGAAAAGGACTTGGGGATTTGTTTGAAGGAGTGCCAGAACATGGGGCTGGCTCTGCCGGGTTTGGCATTGGCTCAGCAGCTTTACTTGTCCCTCAAGGCTCATGGTGAAGGCAATTTGGGCACCCAAGCACTCATTGTGGCTCTGGAGTTCCTCAACAATGTGTCACTCGATGAACAAGCTGGTTCGACAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

512

Amino Acids

57.54

Weight (kDa)

8.28

Isoelectric Point (pI)

33.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 3 - 143 2.1e-08 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 262 - 306 8.4e-13 FBD
NAD_binding_11 PF14833 445 - 493 8.7e-07 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 732
AccB1I GGYRCC 1 cut(s) 1460
AccB7I CCANNNNNTGG 1 cut(s) 1381
AccI GTMKAC 1 cut(s) 51
AccII CGCG 2 cut(s) 163, 536
AciI CCGC 3 cut(s) 161, 268, 534
AclWI GGATC 1 cut(s) 185
AcsI RAATTY 2 cut(s) 451, 915
AcuI CTGAAG 2 cut(s) 701, 1069
AfiI CCNNNNNNNGG 3 cut(s) 617, 1171, 1381
AflII CTTAAG 1 cut(s) 308
AflIII ACRYGT 4 cut(s) 262, 718, 760, 814
AjiI CACGTC 2 cut(s) 721, 817
AjnI CCWGG 1 cut(s) 1179
Alw21I GWGCWC 1 cut(s) 394
Alw26I GTCTC 3 cut(s) 123, 170, 368
AlwI GGATC 1 cut(s) 185
AlwNI CAGNNNCTG 1 cut(s) 1175
Ama87I CYCGRG 1 cut(s) 785
AoxI GGCC 1 cut(s) 1177
ApeKI GCWGC 5 cut(s) 228, 500, 640, 1107, 1417
ApoI RAATTY 2 cut(s) 451, 915
ArsI GACNNNNNNTTYG 2 cut(s) 523, 555
Asp700I GAANNNNTTC 2 cut(s) 216, 408
AspLEI GCGC 2 cut(s) 301, 538
AspS9I GGNCC 3 cut(s) 740, 793, 1220
AsuC2I CCSGG 1 cut(s) 1398
AsuHPI GGTGA 5 cut(s) 681, 905, 941, 1020, 1457
AsuNHI GCTAGC 1 cut(s) 521
AvaI CYCGRG 1 cut(s) 785
AvaII GGWCC 3 cut(s) 740, 793, 1220
BaeGI GKGCMC 1 cut(s) 1463
BanI GGYRCC 1 cut(s) 1460
BanII GRGCYC 1 cut(s) 394
Bbv12I GWGCWC 1 cut(s) 394
BbvI GCAGC 5 cut(s) 215, 512, 627, 1119, 1429
BccI CCATC 5 cut(s) 202, 218, 333, 920, 1041
BceAI ACGGC 1 cut(s) 510
BcgI CGANNNNNNTGC 2 cut(s) 632, 666
BciT130I CCWGG 1 cut(s) 1181
BcnI CCSGG 1 cut(s) 1398
BcoDI GTCTC 3 cut(s) 123, 170, 368
BfaI CTAG 2 cut(s) 522, 698
BfrI CTTAAG 1 cut(s) 308
BglI GCCNNNNNGGC 1 cut(s) 775
BisI GCNGC 6 cut(s) 161, 229, 501, 641, 1108, 1418
BlpI GCTNAGC 1 cut(s) 1413
BlsI GCNGC 6 cut(s) 162, 230, 502, 642, 1109, 1419
Bme1390I CCNGG 2 cut(s) 1181, 1398
Bme18I GGWCC 3 cut(s) 740, 793, 1220
BmeT110I CYCGRG 1 cut(s) 785
BmgBI CACGTC 2 cut(s) 721, 817
BmgT120I GGNCC 3 cut(s) 740, 793, 1220
BmiI GGNNCC 4 cut(s) 795, 979, 1185, 1462
BmrFI CCNGG 2 cut(s) 1181, 1398
BmsI GCATC 2 cut(s) 652, 787
BmtI GCTAGC 1 cut(s) 525
BpmI CTGGAG 2 cut(s) 401, 1505
Bpu10I CCTNAGC 1 cut(s) 1103
Bpu1102I GCTNAGC 1 cut(s) 1413
BpuEI CTTGAG 2 cut(s) 1244, 1418
BpuMI CCSGG 1 cut(s) 1398
BsaAI YACGTR 1 cut(s) 763
BsaI GGTCTC 2 cut(s) 123, 368
BsaJI CCNNGG 1 cut(s) 493
Bsc4I CCNNNNNNNGG 3 cut(s) 617, 1171, 1381
Bse1I ACTGG 2 cut(s) 262, 743
BseBI CCWGG 1 cut(s) 1181
BseDI CCNNGG 1 cut(s) 493
BseGI GGATG 6 cut(s) 229, 355, 508, 598, 778, 1069
BseLI CCNNNNNNNGG 3 cut(s) 617, 1171, 1381
BseMII CTCAG 3 cut(s) 1094, 1224, 1427
BseNI ACTGG 2 cut(s) 262, 743
BseSI GKGCMC 1 cut(s) 1463
BseXI GCAGC 5 cut(s) 215, 512, 627, 1119, 1429
BsgI GTGCAG 1 cut(s) 219
Bsh1236I CGCG 2 cut(s) 163, 536
Bsh1285I CGRYCG 1 cut(s) 534
BshFI GGCC 1 cut(s) 1179
BshNI GGYRCC 1 cut(s) 1460
BsiEI CGRYCG 1 cut(s) 534
BsiHKAI GWGCWC 1 cut(s) 394
BsiHKCI CYCGRG 1 cut(s) 785
BsiSI CCGG 1 cut(s) 1397
BslFI GGGAC 3 cut(s) 556, 779, 1414
BslI CCNNNNNNNGG 3 cut(s) 617, 1171, 1381
BsmAI GTCTC 3 cut(s) 123, 170, 368
BsmBI CGTCTC 1 cut(s) 170
BsmFI GGGAC 3 cut(s) 556, 779, 1414
BsmI GAATGC 1 cut(s) 1323
BsnI GGCC 1 cut(s) 1179
Bso31I GGTCTC 2 cut(s) 123, 368
BsoBI CYCGRG 1 cut(s) 785
Bsp1286I GDGCHC 2 cut(s) 394, 1463
Bsp143I GATC 5 cut(s) 22, 190, 481, 604, 686
Bsp1720I GCTNAGC 1 cut(s) 1413
BspACI CCGC 3 cut(s) 161, 268, 534
BspANI GGCC 1 cut(s) 1179
BspCNI CTCAG 3 cut(s) 1095, 1225, 1426
BspFNI CGCG 2 cut(s) 163, 536
BspHI TCATGA 1 cut(s) 1036
BspLI GGNNCC 4 cut(s) 795, 979, 1185, 1462
BspOI GCTAGC 1 cut(s) 525
BspPI GGATC 1 cut(s) 185
BspT107I GGYRCC 1 cut(s) 1460
BspTI CTTAAG 1 cut(s) 308
BspTNI GGTCTC 2 cut(s) 123, 368
BsrI ACTGG 2 cut(s) 262, 743
BssECI CCNNGG 1 cut(s) 493
BssMI GATC 5 cut(s) 22, 190, 481, 604, 686
Bst2UI CCWGG 1 cut(s) 1181
Bst4CI ACNGT 1 cut(s) 1139
Bst6I CTCTTC 1 cut(s) 677
BstAFI CTTAAG 1 cut(s) 308
BstBAI YACGTR 1 cut(s) 763
BstC8I GCNNGC 3 cut(s) 523, 1177, 1389
BstDEI CTNAG 3 cut(s) 1103, 1233, 1413
BstDSI CCRYGG 1 cut(s) 493
BstENI CCTNNNNNAGG 1 cut(s) 1169
BstF5I GGATG 6 cut(s) 229, 355, 508, 598, 778, 1069
BstFNI CGCG 2 cut(s) 163, 536
BstHHI GCGC 2 cut(s) 301, 538
BstKTI GATC 5 cut(s) 25, 193, 484, 607, 689
BstMAI GTCTC 3 cut(s) 123, 170, 368
BstMBI GATC 5 cut(s) 22, 190, 481, 604, 686
BstMCI CGRYCG 1 cut(s) 534
BstMWI GCNNNNNNNGC 8 cut(s) 527, 542, 775, 1116, 1155, 1181, 1393, 1458
BstNI CCWGG 1 cut(s) 1181
BstNSI RCATGY 1 cut(s) 266
BstSCI CCNGG 2 cut(s) 1179, 1396
BstSLI GKGCMC 1 cut(s) 1463
BstUI CGCG 2 cut(s) 163, 536
BstV1I GCAGC 5 cut(s) 215, 512, 627, 1119, 1429
BsuRI GGCC 1 cut(s) 1179
BtgI CCRYGG 1 cut(s) 493
BtrI CACGTC 2 cut(s) 721, 817
BtsCI GGATG 6 cut(s) 229, 355, 508, 598, 778, 1069
BtsIMutI CAGTG 2 cut(s) 1144, 1230
Cac8I GCNNGC 3 cut(s) 523, 1177, 1389
CaiI CAGNNNCTG 1 cut(s) 1175
CciI TCATGA 1 cut(s) 1036
CfoI GCGC 2 cut(s) 301, 538
Cfr13I GGNCC 3 cut(s) 740, 793, 1220
CseI GACGC 1 cut(s) 152
CspCI CAANNNNNGTGG 2 cut(s) 718, 753
CviAII CATG 8 cut(s) 150, 263, 557, 910, 1037, 1055, 1381, 1442
DdeI CTNAG 3 cut(s) 1103, 1233, 1413
DpnI GATC 5 cut(s) 24, 192, 483, 606, 688
DpnII GATC 5 cut(s) 22, 190, 481, 604, 686
DraI TTTAAA 2 cut(s) 627, 865
DrdI GACNNNNNNGTC 1 cut(s) 732
DseDI GACNNNNNNGTC 1 cut(s) 732
Eam1104I CTCTTC 1 cut(s) 677
EarI CTCTTC 1 cut(s) 677
Ecl136II GAGCTC 1 cut(s) 392
Eco24I GRGCYC 1 cut(s) 394
Eco31I GGTCTC 2 cut(s) 123, 368
Eco47I GGWCC 3 cut(s) 740, 793, 1220
Eco53kI GAGCTC 1 cut(s) 392
Eco57I CTGAAG 2 cut(s) 701, 1069
Eco88I CYCGRG 1 cut(s) 785
EcoICRI GAGCTC 1 cut(s) 392
EcoNI CCTNNNNNAGG 1 cut(s) 1169
EcoRI GAATTC 1 cut(s) 451
EcoRII CCWGG 1 cut(s) 1179
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 394
Esp3I CGTCTC 1 cut(s) 170
FaeI CATG 8 cut(s) 153, 266, 560, 913, 1040, 1058, 1384, 1445
FalI AAGNNNNNCTT 2 cut(s) 1275, 1307
FaqI GGGAC 3 cut(s) 556, 779, 1414
FatI CATG 8 cut(s) 149, 262, 556, 909, 1036, 1054, 1380, 1441
FauI CCCGC 1 cut(s) 261
FblI GTMKAC 1 cut(s) 51
Fnu4HI GCNGC 6 cut(s) 161, 229, 501, 641, 1108, 1418
FokI GGATG 6 cut(s) 236, 362, 495, 605, 765, 1056
FriOI GRGCYC 1 cut(s) 394
Fsp4HI GCNGC 6 cut(s) 161, 229, 501, 641, 1108, 1418
FspBI CTAG 2 cut(s) 522, 698
GlaI GCGC 2 cut(s) 300, 537
GluI GCNGC 6 cut(s) 161, 229, 501, 641, 1108, 1418
GsuI CTGGAG 2 cut(s) 401, 1505
HaeIII GGCC 1 cut(s) 1179
HapII CCGG 1 cut(s) 1397
HgaI GACGC 1 cut(s) 152
HhaI GCGC 2 cut(s) 301, 538
Hin1II CATG 8 cut(s) 153, 266, 560, 913, 1040, 1058, 1384, 1445
Hin6I GCGC 2 cut(s) 299, 536
HinP1I GCGC 2 cut(s) 299, 536
HincII GTYRAC 2 cut(s) 52, 318
HindII GTYRAC 2 cut(s) 52, 318
HindIII AAGCTT 5 cut(s) 215, 436, 1008, 1081, 1289
HinfI GANTC 5 cut(s) 146, 701, 840, 1046, 1095
HpaI GTTAAC 1 cut(s) 318
HpaII CCGG 1 cut(s) 1397
HphI GGTGA 5 cut(s) 681, 905, 941, 1020, 1457
Hpy166II GTNNAC 3 cut(s) 52, 318, 740
Hpy188I TCNGA 4 cut(s) 725, 1064, 1155, 1171
Hpy8I GTNNAC 3 cut(s) 52, 318, 740
Hpy99I CGWCG 2 cut(s) 56, 725
HpyAV CCTTC 3 cut(s) 1121, 1360, 1442
HpyCH4III ACNGT 1 cut(s) 1139
HpyCH4IV ACGT 3 cut(s) 720, 762, 816
HpyCH4V TGCA 7 cut(s) 4, 90, 236, 643, 872, 941, 1321
HpyF10VI GCNNNNNNNGC 8 cut(s) 527, 542, 775, 1116, 1155, 1181, 1393, 1458
HpyF3I CTNAG 3 cut(s) 1103, 1233, 1413
HpySE526I ACGT 3 cut(s) 720, 762, 816
Hsp92II CATG 8 cut(s) 153, 266, 560, 913, 1040, 1058, 1384, 1445
HspAI GCGC 2 cut(s) 299, 536
KspAI GTTAAC 1 cut(s) 318
Kzo9I GATC 5 cut(s) 22, 190, 481, 604, 686
LmnI GCTCC 3 cut(s) 397, 497, 1189
Lsp1109I GCAGC 5 cut(s) 215, 512, 627, 1119, 1429
LweI GCATC 2 cut(s) 652, 787
MaeI CTAG 2 cut(s) 522, 698
MaeII ACGT 3 cut(s) 720, 762, 816
MaeIII GTNAC 5 cut(s) 31, 253, 331, 810, 1503
MalI GATC 5 cut(s) 24, 192, 483, 606, 688
MboI GATC 5 cut(s) 22, 190, 481, 604, 686
MboII GAAGA 5 cut(s) 287, 638, 694, 898, 1340
MfeI CAATTG 2 cut(s) 632, 730
MhlI GDGCHC 2 cut(s) 394, 1463
MmeI TCCRAC 3 cut(s) 327, 703, 930
MnlI CCTC 6 cut(s) 792, 1165, 1193, 1228, 1442, 1502
Mph1103I ATGCAT 1 cut(s) 6
MroXI GAANNNNTTC 2 cut(s) 216, 408
MspCI CTTAAG 1 cut(s) 308
MspI CCGG 1 cut(s) 1397
MspR9I CCNGG 2 cut(s) 1181, 1398
MunI CAATTG 2 cut(s) 632, 730
Mva1269I GAATGC 1 cut(s) 1323
MvaI CCWGG 1 cut(s) 1181
MvnI CGCG 2 cut(s) 163, 536
MwoI GCNNNNNNNGC 8 cut(s) 527, 542, 775, 1116, 1155, 1181, 1393, 1458
NciI CCSGG 1 cut(s) 1398
NdeII GATC 5 cut(s) 22, 190, 481, 604, 686
NheI GCTAGC 1 cut(s) 521
NlaIII CATG 8 cut(s) 153, 266, 560, 913, 1040, 1058, 1384, 1445
NlaIV GGNNCC 4 cut(s) 795, 979, 1185, 1462
NmuCI GTSAC 3 cut(s) 331, 810, 1503
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 266
PagI TCATGA 1 cut(s) 1036
PciI ACATGT 1 cut(s) 262
PctI GAATGC 1 cut(s) 1323
PdmI GAANNNNTTC 2 cut(s) 216, 408
PfeI GAWTC 5 cut(s) 146, 701, 840, 1046, 1095
PflMI CCANNNNNTGG 1 cut(s) 1381
PkrI GCNGC 6 cut(s) 162, 230, 502, 642, 1109, 1419
Ppu21I YACGTR 1 cut(s) 763
PscI ACATGT 1 cut(s) 262
Psp124BI GAGCTC 1 cut(s) 394
Psp6I CCWGG 1 cut(s) 1179
PspGI CCWGG 1 cut(s) 1179
PspN4I GGNNCC 4 cut(s) 795, 979, 1185, 1462
PspPI GGNCC 3 cut(s) 740, 793, 1220
PstNI CAGNNNCTG 1 cut(s) 1175
SacI GAGCTC 1 cut(s) 394
SalI GTCGAC 1 cut(s) 50
SatI GCNGC 6 cut(s) 161, 229, 501, 641, 1108, 1418
Sau3AI GATC 5 cut(s) 22, 190, 481, 604, 686
Sau96I GGNCC 3 cut(s) 740, 793, 1220
ScrFI CCNGG 2 cut(s) 1181, 1398
SduI GDGCHC 2 cut(s) 394, 1463
SfaNI GCATC 2 cut(s) 652, 787
SinI GGWCC 3 cut(s) 740, 793, 1220
SmlI CTYRAG 3 cut(s) 308, 1259, 1433
SmoI CTYRAG 3 cut(s) 308, 1259, 1433
SsiI CCGC 3 cut(s) 161, 268, 534
SspMI CTAG 2 cut(s) 522, 698
SstI GAGCTC 1 cut(s) 394
StyD4I CCNGG 2 cut(s) 1179, 1396
TaaI ACNGT 1 cut(s) 1139
TaiI ACGT 3 cut(s) 723, 765, 819
TaqI TCGA 5 cut(s) 21, 51, 402, 1509, 1526
TauI GCSGC 1 cut(s) 163
TfiI GAWTC 5 cut(s) 146, 701, 840, 1046, 1095
TscAI CASTG 2 cut(s) 1144, 1237
TseFI GTSAC 3 cut(s) 331, 810, 1503
TseI GCWGC 5 cut(s) 228, 500, 640, 1107, 1417
Tsp45I GTSAC 3 cut(s) 331, 810, 1503
TspDTI ATGAA 6 cut(s) 138, 401, 567, 638, 926, 1527
TspGWI ACGGA 1 cut(s) 510
TspRI CASTG 2 cut(s) 1144, 1237
Van91I CCANNNNNTGG 1 cut(s) 1381
Vha464I CTTAAG 1 cut(s) 308
VpaK11BI GGWCC 3 cut(s) 740, 793, 1220
XagI CCTNNNNNAGG 1 cut(s) 1169
XapI RAATTY 2 cut(s) 451, 915
XbaI TCTAGA 1 cut(s) 697
XceI RCATGY 1 cut(s) 266
XmiI GTMKAC 1 cut(s) 51
XmnI GAANNNNTTC 2 cut(s) 216, 408
XspI CTAG 2 cut(s) 522, 698
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.