RchiOBHm_Chr5g0028471

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000062
Physical Location & Seq
Forward (+)
22297227 .. 22300918
3692 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30791

Sequence Viewer

Length: 1524 bp
ATGTGGACGAGGAGAGCACCAACCTCGTCACAAGCTTGGACCACGGATATTGGCCCGGATTTCTTCGAGTCCCCCTTATTGGGAAAAAATGTAATTTTGGGTTCAAACACTTTCCTTCAAACAATCTATGCTGTGAGGACCAGTGTTCTGTTTACAAGATGGAAGTATATATGGAAGTCTGTTCCTAATTTGGACTTCAACAGTGGCCCTTTTCGTGAATCTGCTAAATTGAAGACGGTTGGTGATCATGTACTTTTCTTTCGTAACTCATCAAACATTCAAAGATTTCGTCTTAATTGGAATTATAATGGTATCGATCAGTCTTGTATTTATGGTTGGATCCACACTGCCATGAAGCGTAATGTTGTTGAACTCGATCTTTTTGTTAATAGTAGACTTCATTGCCATTTTTTTGAGTTGCCCAAAAGCATCTTCATGTGCAAGACACTCATGATTCTGAAGCTGAGATCAAACTTCACTGCCAATAATATTCCTGCATCAGGGTGTTTCCCAAATCTCAAGTTTCTCCATGTTACATCTATGGTGAAGGACAATGTGATATTGAAGGTTGTTGTATCAACCCCAAGTTCAGCAGTCAACCCCAGGAGAAAAGATCTAGCACTTTACCCAGTTTTCTTACTGTATGTATATGTTGGTTTTGGGGCCTCAAATTTTTTTTTTCGCCTTGAGCCTCCGAACTCACAGGGCCGGCCCTGTGTTGATCATTATATTTGTACTGACTCAATGGTTAAGCTCTTCTCTAGCTGCCCGGTACTTGAAGATTTGACTATAGACGGTCACCTTACATGGAGTGTTTCTGTTTTAGAAATTGCTGCCCCTGCACTGAAGACACTAAGCATATGTTGTAATATTTGGTATCCTGGTGGTCAGTACAACTATTCGATTAATTGCCCAAAGCTTGAGAAGTTTGTTCTAAAGGGGAATGTTTTGGCAAACTTTTATTTGGGCCAAGCAGAATCCCTAGTTAAAGCCAATATTGAGCTACTTTGCCATTTTTCGAAGAAAGAATCTGGCTTTTCCCTAGTTACAGCGCTTTTGGCTGGAGTATCCAATGTTAATTTTTTATGTTTTTCCGCTCATTGTTTTGAGGTTGGTTCTCTACCTGCTTTTGGTAATTTGAGCAAATTGAGGTTGGTGCTTTACAAATGCTTTCCCTGGGAATTGCTAACAGAGTTACTTAGCAGATCACCTCATCTGCAGTATCTTGTCTTAGAACATAGTTATGGAGCAGACTCAGAACCTTATGAAGGCCCGAAGCCGCGATGGCGTGCACCAGAGCTTGTGCCTAGTTGTTTAGAATCAAACCTCGAGACTATCTACATTGAGGGATTCAAGGGGCAGCTGAATACAATGGAAGTGGCTAAATATTTCTTAAGGAACTATGAAGTTTTGAAGAAGTTGACGCTTTCTTCAGATCCTTTGTGTGAAGAAATGCAGGCCTTACACAAAAAGCTTTTAATGGTTCCAAAGGTTTCGAAGGCTTGTGTAGTTAATTTTGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

507

Amino Acids

57.58

Weight (kDa)

8.94

Isoelectric Point (pI)

43.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 112 - 189 2.8e-07 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 433 - 476 1.3e-11 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 306
Acc36I ACCTGC 1 cut(s) 1132
AccBSI CCGCTC 1 cut(s) 1097
AccI GTMKAC 1 cut(s) 394
AccII CGCG 1 cut(s) 1282
AciI CCGC 2 cut(s) 1095, 1280
AclWI GGATC 3 cut(s) 334, 347, 1430
AcsI RAATTY 1 cut(s) 670
AcuI CTGAAG 3 cut(s) 479, 866, 1416
AfaI GTAC 4 cut(s) 252, 736, 774, 893
AfeI AGCGCT 1 cut(s) 1053
AfiI CCNNNNNNNGG 5 cut(s) 79, 80, 500, 1130, 1268
AflII CTTAAG 1 cut(s) 1393
AjnI CCWGG 3 cut(s) 602, 880, 1175
AjuI GAANNNNNNNTTGG 2 cut(s) 416, 448
AluBI AGCT 9 cut(s) 35, 463, 754, 765, 919, 1003, 1300, 1363, 1474
AluI AGCT 9 cut(s) 35, 463, 754, 765, 919, 1003, 1300, 1363, 1474
Alw21I GWGCWC 2 cut(s) 19, 1294
Alw26I GTCTC 1 cut(s) 1325
Alw44I GTGCAC 1 cut(s) 1290
AlwI GGATC 3 cut(s) 334, 347, 1430
Ama87I CYCGRG 1 cut(s) 1328
Aor51HI AGCGCT 1 cut(s) 1053
AoxI GGCC 8 cut(s) 52, 205, 663, 706, 710, 967, 1270, 1458
ApaLI GTGCAC 1 cut(s) 1290
ApeKI GCWGC 3 cut(s) 765, 833, 1360
ApoI RAATTY 1 cut(s) 670
ArsI GACNNNNNNTTYG 2 cut(s) 274, 306
AseI ATTAAT 1 cut(s) 906
AspLEI GCGC 1 cut(s) 1054
AspS9I GGNCC 9 cut(s) 39, 53, 138, 206, 663, 706, 711, 967, 1271
AsuC2I CCSGG 2 cut(s) 56, 770
AsuHPI GGTGA 4 cut(s) 254, 556, 791, 1200
AsuII TTCGAA 2 cut(s) 1019, 1496
AvaI CYCGRG 1 cut(s) 1328
AvaII GGWCC 2 cut(s) 39, 138
BaeGI GKGCMC 1 cut(s) 1294
BamHI GGATCC 1 cut(s) 339
BbsI GAAGAC 2 cut(s) 239, 854
Bbv12I GWGCWC 2 cut(s) 19, 1294
BbvI GCAGC 3 cut(s) 752, 820, 1372
BccI CCATC 2 cut(s) 153, 1278
BcgI CGANNNNNNTGC 2 cut(s) 6, 40
BciT130I CCWGG 3 cut(s) 604, 882, 1177
BciVI GTATCC 2 cut(s) 888, 1078
BclI TGATCA 2 cut(s) 244, 721
BcnI CCSGG 2 cut(s) 56, 770
BcoDI GTCTC 1 cut(s) 1325
BfaI CTAG 5 cut(s) 617, 762, 983, 1043, 1308
BfmI CTRYAG 2 cut(s) 789, 1217
BfoI RGCGCY 1 cut(s) 1055
BfrI CTTAAG 1 cut(s) 1393
BfuAI ACCTGC 1 cut(s) 1132
BfuI GTATCC 2 cut(s) 888, 1078
BglI GCCNNNNNGGC 1 cut(s) 1285
BglII AGATCT 1 cut(s) 613
BisI GCNGC 4 cut(s) 766, 834, 1280, 1361
BlsI GCNGC 4 cut(s) 767, 835, 1281, 1362
Bme1390I CCNGG 5 cut(s) 56, 604, 770, 882, 1177
Bme18I GGWCC 2 cut(s) 39, 138
BmeT110I CYCGRG 1 cut(s) 1328
BmgT120I GGNCC 9 cut(s) 39, 53, 138, 206, 663, 706, 711, 967, 1271
BmiI GGNNCC 3 cut(s) 341, 664, 1485
BmrFI CCNGG 5 cut(s) 56, 604, 770, 882, 1177
BmrI ACTGGG 1 cut(s) 623
BmsI GCATC 2 cut(s) 438, 506
BmuI ACTGGG 1 cut(s) 623
BpiI GAAGAC 2 cut(s) 239, 854
BpmI CTGGAG 1 cut(s) 1083
Bpu14I TTCGAA 2 cut(s) 1019, 1496
BpuEI CTTGAG 3 cut(s) 503, 707, 941
BpuMI CCSGG 2 cut(s) 56, 770
Bsa29I ATCGAT 1 cut(s) 315
BsaJI CCNNGG 4 cut(s) 42, 602, 1175, 1176
Bsc4I CCNNNNNNNGG 5 cut(s) 79, 80, 500, 1130, 1268
Bse118I RCCGGY 1 cut(s) 708
Bse1I ACTGG 2 cut(s) 141, 629
Bse3DI GCAATG 1 cut(s) 400
BseBI CCWGG 3 cut(s) 604, 882, 1177
BseCI ATCGAT 1 cut(s) 315
BseDI CCNNGG 4 cut(s) 42, 602, 1175, 1176
BseLI CCNNNNNNNGG 5 cut(s) 79, 80, 500, 1130, 1268
BseMI GCAATG 1 cut(s) 400
BseMII CTCAG 2 cut(s) 455, 1269
BseNI ACTGG 2 cut(s) 141, 629
BseRI GAGGAG 1 cut(s) 25
BseSI GKGCMC 1 cut(s) 1294
BseXI GCAGC 3 cut(s) 752, 820, 1372
BsgI GTGCAG 1 cut(s) 825
Bsh1236I CGCG 1 cut(s) 1282
BshFI GGCC 8 cut(s) 54, 207, 665, 708, 712, 969, 1272, 1460
BshVI ATCGAT 1 cut(s) 315
BsiHKAI GWGCWC 2 cut(s) 19, 1294
BsiHKCI CYCGRG 1 cut(s) 1328
BsiSI CCGG 3 cut(s) 56, 709, 770
BslFI GGGAC 1 cut(s) 55
BslI CCNNNNNNNGG 5 cut(s) 79, 80, 500, 1130, 1268
BsmAI GTCTC 1 cut(s) 1325
BsmFI GGGAC 1 cut(s) 55
BsnI GGCC 8 cut(s) 54, 207, 665, 708, 712, 969, 1272, 1460
BsoBI CYCGRG 1 cut(s) 1328
Bsp119I TTCGAA 2 cut(s) 1019, 1496
Bsp1286I GDGCHC 2 cut(s) 19, 1294
Bsp143I GATC 9 cut(s) 244, 316, 339, 376, 467, 613, 721, 1205, 1435
BspACI CCGC 2 cut(s) 1095, 1280
BspANI GGCC 8 cut(s) 54, 207, 665, 708, 712, 969, 1272, 1460
BspCNI CTCAG 2 cut(s) 456, 1268
BspDI ATCGAT 1 cut(s) 315
BspFNI CGCG 1 cut(s) 1282
BspHI TCATGA 1 cut(s) 450
BspLI GGNNCC 3 cut(s) 341, 664, 1485
BspMAI CTGCAG 1 cut(s) 1221
BspMI ACCTGC 1 cut(s) 1132
BspPI GGATC 3 cut(s) 334, 347, 1430
BspQI GCTCTTC 1 cut(s) 761
BspT104I TTCGAA 2 cut(s) 1019, 1496
BspTI CTTAAG 1 cut(s) 1393
BsrBI CCGCTC 1 cut(s) 1097
BsrDI GCAATG 1 cut(s) 400
BsrFI RCCGGY 1 cut(s) 708
BsrI ACTGG 2 cut(s) 141, 629
BssAI RCCGGY 1 cut(s) 708
BssECI CCNNGG 4 cut(s) 42, 602, 1175, 1176
BssMI GATC 9 cut(s) 244, 316, 339, 376, 467, 613, 721, 1205, 1435
Bst2UI CCWGG 3 cut(s) 604, 882, 1177
Bst4CI ACNGT 4 cut(s) 203, 238, 642, 797
Bst6I CTCTTC 1 cut(s) 761
BstAFI CTTAAG 1 cut(s) 1393
BstBI TTCGAA 2 cut(s) 1019, 1496
BstC8I GCNNGC 3 cut(s) 710, 1290, 1458
BstDEI CTNAG 5 cut(s) 464, 854, 1199, 1231, 1255
BstDSI CCRYGG 1 cut(s) 42
BstEII GGTNACC 1 cut(s) 797
BstENI CCTNNNNNAGG 2 cut(s) 498, 1266
BstFNI CGCG 1 cut(s) 1282
BstH2I RGCGCY 1 cut(s) 1055
BstHHI GCGC 1 cut(s) 1054
BstKTI GATC 9 cut(s) 247, 319, 342, 379, 470, 616, 724, 1208, 1438
BstMAI GTCTC 1 cut(s) 1325
BstMBI GATC 9 cut(s) 244, 316, 339, 376, 467, 613, 721, 1205, 1435
BstMWI GCNNNNNNNGC 3 cut(s) 839, 1058, 1285
BstNI CCWGG 3 cut(s) 604, 882, 1177
BstPI GGTNACC 1 cut(s) 797
BstSCI CCNGG 5 cut(s) 54, 602, 768, 880, 1175
BstSFI CTRYAG 2 cut(s) 789, 1217
BstSLI GKGCMC 1 cut(s) 1294
BstUI CGCG 1 cut(s) 1282
BstV1I GCAGC 3 cut(s) 752, 820, 1372
BstV2I GAAGAC 2 cut(s) 239, 854
BstX2I RGATCY 3 cut(s) 339, 613, 1435
BstYI RGATCY 3 cut(s) 339, 613, 1435
Bsu15I ATCGAT 1 cut(s) 315
BsuI GTATCC 2 cut(s) 888, 1078
BsuRI GGCC 8 cut(s) 54, 207, 665, 708, 712, 969, 1272, 1460
BsuTUI ATCGAT 1 cut(s) 315
BtgI CCRYGG 1 cut(s) 42
BtgZI GCGATG 1 cut(s) 1297
BtsI GCAGTG 2 cut(s) 345, 477
BtsIMutI CAGTG 5 cut(s) 148, 208, 345, 477, 842
BveI ACCTGC 1 cut(s) 1132
Cac8I GCNNGC 3 cut(s) 710, 1290, 1458
CciI TCATGA 1 cut(s) 450
CfoI GCGC 1 cut(s) 1054
Cfr10I RCCGGY 1 cut(s) 708
Cfr13I GGNCC 9 cut(s) 39, 53, 138, 206, 663, 706, 711, 967, 1271
ClaI ATCGAT 1 cut(s) 315
CseI GACGC 1 cut(s) 1432
Csp6I GTAC 4 cut(s) 251, 735, 773, 892
CspCI CAANNNNNGTGG 4 cut(s) 31, 66, 1359, 1394
CviAII CATG 6 cut(s) 248, 352, 436, 451, 530, 807
CviQI GTAC 4 cut(s) 251, 735, 773, 892
DdeI CTNAG 5 cut(s) 464, 854, 1199, 1231, 1255
DpnI GATC 9 cut(s) 246, 318, 341, 378, 469, 615, 723, 1207, 1437
DpnII GATC 9 cut(s) 244, 316, 339, 376, 467, 613, 721, 1205, 1435
Eam1104I CTCTTC 1 cut(s) 761
EarI CTCTTC 1 cut(s) 761
Eco147I AGGCCT 1 cut(s) 1460
Eco47I GGWCC 2 cut(s) 39, 138
Eco47III AGCGCT 1 cut(s) 1053
Eco57I CTGAAG 3 cut(s) 479, 866, 1416
Eco88I CYCGRG 1 cut(s) 1328
Eco91I GGTNACC 1 cut(s) 797
EcoNI CCTNNNNNAGG 2 cut(s) 498, 1266
EcoO109I RGGNCCY 1 cut(s) 663
EcoO65I GGTNACC 1 cut(s) 797
EcoRII CCWGG 3 cut(s) 602, 880, 1175
FaeI CATG 6 cut(s) 251, 355, 439, 454, 533, 810
FaqI GGGAC 1 cut(s) 55
FatI CATG 6 cut(s) 247, 351, 435, 450, 529, 806
FauNDI CATATG 1 cut(s) 860
FbaI TGATCA 2 cut(s) 244, 721
FblI GTMKAC 1 cut(s) 394
Fnu4HI GCNGC 4 cut(s) 766, 834, 1280, 1361
FseI GGCCGGCC 1 cut(s) 712
Fsp4HI GCNGC 4 cut(s) 766, 834, 1280, 1361
FspBI CTAG 5 cut(s) 617, 762, 983, 1043, 1308
GlaI GCGC 1 cut(s) 1053
GluI GCNGC 4 cut(s) 766, 834, 1280, 1361
GsuI CTGGAG 1 cut(s) 1083
HaeII RGCGCY 1 cut(s) 1055
HaeIII GGCC 8 cut(s) 54, 207, 665, 708, 712, 969, 1272, 1460
HapII CCGG 3 cut(s) 56, 709, 770
HgaI GACGC 1 cut(s) 1432
HhaI GCGC 1 cut(s) 1054
Hin1II CATG 6 cut(s) 251, 355, 439, 454, 533, 810
Hin6I GCGC 1 cut(s) 1052
HinP1I GCGC 1 cut(s) 1052
HincII GTYRAC 2 cut(s) 598, 1422
HindII GTYRAC 2 cut(s) 598, 1422
HindIII AAGCTT 3 cut(s) 33, 917, 1472
HinfI GANTC 9 cut(s) 68, 218, 454, 740, 977, 1028, 1253, 1319, 1350
HpaII CCGG 3 cut(s) 56, 709, 770
HphI GGTGA 4 cut(s) 254, 556, 791, 1200
Hpy166II GTNNAC 6 cut(s) 6, 153, 395, 598, 1292, 1422
Hpy188I TCNGA 4 cut(s) 459, 696, 1258, 1435
Hpy188III TCNNGA 3 cut(s) 215, 451, 1330
Hpy8I GTNNAC 6 cut(s) 6, 153, 395, 598, 1292, 1422
HpyAV CCTTC 5 cut(s) 125, 541, 559, 1262, 1492
HpyCH4III ACNGT 4 cut(s) 203, 238, 642, 797
HpyCH4V TGCA 6 cut(s) 441, 497, 842, 1219, 1292, 1456
HpyF10VI GCNNNNNNNGC 3 cut(s) 839, 1058, 1285
HpyF3I CTNAG 5 cut(s) 464, 854, 1199, 1231, 1255
Hsp92II CATG 6 cut(s) 251, 355, 439, 454, 533, 810
HspAI GCGC 1 cut(s) 1052
KroI GCCGGC 1 cut(s) 708
KroNI GCCGGC 1 cut(s) 710
Ksp22I TGATCA 2 cut(s) 244, 721
Kzo9I GATC 9 cut(s) 244, 316, 339, 376, 467, 613, 721, 1205, 1435
LguI GCTCTTC 1 cut(s) 761
LmnI GCTCC 1 cut(s) 1247
Lsp1109I GCAGC 3 cut(s) 752, 820, 1372
LweI GCATC 2 cut(s) 438, 506
MaeI CTAG 5 cut(s) 617, 762, 983, 1043, 1308
MaeIII GTNAC 6 cut(s) 27, 263, 532, 797, 1045, 1194
MalI GATC 9 cut(s) 246, 318, 341, 378, 469, 615, 723, 1207, 1437
MbiI CCGCTC 1 cut(s) 1097
MboI GATC 9 cut(s) 244, 316, 339, 376, 467, 613, 721, 1205, 1435
MflI RGATCY 3 cut(s) 339, 613, 1435
MhlI GDGCHC 2 cut(s) 19, 1294
MlyI GAGTC 3 cut(s) 77, 734, 1247
MmeI TCCRAC 1 cut(s) 317
MroNI GCCGGC 1 cut(s) 708
MseI TTAA 9 cut(s) 294, 387, 750, 906, 987, 1077, 1394, 1478, 1512
MslI CAYNNNNRTG 4 cut(s) 350, 434, 502, 1242
MspA1I CMGCKG 1 cut(s) 1363
MspCI CTTAAG 1 cut(s) 1393
MspI CCGG 3 cut(s) 56, 709, 770
MspR9I CCNGG 5 cut(s) 56, 604, 770, 882, 1177
MvaI CCWGG 3 cut(s) 604, 882, 1177
MvnI CGCG 1 cut(s) 1282
MwoI GCNNNNNNNGC 3 cut(s) 839, 1058, 1285
NaeI GCCGGC 1 cut(s) 710
NciI CCSGG 2 cut(s) 56, 770
NdeI CATATG 1 cut(s) 860
NdeII GATC 9 cut(s) 244, 316, 339, 376, 467, 613, 721, 1205, 1435
NgoMIV GCCGGC 1 cut(s) 708
NlaIII CATG 6 cut(s) 251, 355, 439, 454, 533, 810
NlaIV GGNNCC 3 cut(s) 341, 664, 1485
NmuCI GTSAC 2 cut(s) 27, 797
NspV TTCGAA 2 cut(s) 1019, 1496
PaeR7I CTCGAG 1 cut(s) 1328
PagI TCATGA 1 cut(s) 450
PasI CCCWGGG 1 cut(s) 1176
PceI AGGCCT 1 cut(s) 1460
PciSI GCTCTTC 1 cut(s) 761
PdiI GCCGGC 1 cut(s) 710
PfeI GAWTC 6 cut(s) 218, 454, 977, 1028, 1319, 1350
PkrI GCNGC 4 cut(s) 767, 835, 1281, 1362
PleI GAGTC 3 cut(s) 76, 734, 1247
PpsI GAGTC 3 cut(s) 76, 734, 1247
PshBI ATTAAT 1 cut(s) 906
PsiI TTATAA 1 cut(s) 306
Psp6I CCWGG 3 cut(s) 602, 880, 1175
PspEI GGTNACC 1 cut(s) 797
PspGI CCWGG 3 cut(s) 602, 880, 1175
PspN4I GGNNCC 3 cut(s) 341, 664, 1485
PspPI GGNCC 9 cut(s) 39, 53, 138, 206, 663, 706, 711, 967, 1271
PstI CTGCAG 1 cut(s) 1221
PsuI RGATCY 3 cut(s) 339, 613, 1435
PvuII CAGCTG 1 cut(s) 1363
RigI GGCCGGCC 1 cut(s) 712
RsaI GTAC 4 cut(s) 252, 736, 774, 893
RsaNI GTAC 4 cut(s) 251, 735, 773, 892
RseI CAYNNNNRTG 4 cut(s) 350, 434, 502, 1242
SapI GCTCTTC 1 cut(s) 761
SaqAI TTAA 9 cut(s) 294, 387, 750, 906, 987, 1077, 1394, 1478, 1512
SatI GCNGC 4 cut(s) 766, 834, 1280, 1361
Sau3AI GATC 9 cut(s) 244, 316, 339, 376, 467, 613, 721, 1205, 1435
Sau96I GGNCC 9 cut(s) 39, 53, 138, 206, 663, 706, 711, 967, 1271
SchI GAGTC 3 cut(s) 77, 734, 1247
ScrFI CCNGG 5 cut(s) 56, 604, 770, 882, 1177
SduI GDGCHC 2 cut(s) 19, 1294
SfaNI GCATC 2 cut(s) 438, 506
SfcI CTRYAG 2 cut(s) 789, 1217
Sfr274I CTCGAG 1 cut(s) 1328
SfuI TTCGAA 2 cut(s) 1019, 1496
SinI GGWCC 2 cut(s) 39, 138
SlaI CTCGAG 1 cut(s) 1328
SmiMI CAYNNNNRTG 4 cut(s) 350, 434, 502, 1242
SmlI CTYRAG 5 cut(s) 518, 686, 920, 1328, 1393
SmoI CTYRAG 5 cut(s) 518, 686, 920, 1328, 1393
SseBI AGGCCT 1 cut(s) 1460
SsiI CCGC 2 cut(s) 1095, 1280
SspI AATATT 4 cut(s) 490, 871, 997, 1388
SspMI CTAG 5 cut(s) 617, 762, 983, 1043, 1308
StuI AGGCCT 1 cut(s) 1460
StyD4I CCNGG 5 cut(s) 54, 602, 768, 880, 1175
TaaI ACNGT 4 cut(s) 203, 238, 642, 797
TaqI TCGA 7 cut(s) 66, 315, 375, 902, 1019, 1329, 1496
TatI WGTACW 3 cut(s) 250, 734, 891
TauI GCSGC 1 cut(s) 1282
TfiI GAWTC 6 cut(s) 218, 454, 977, 1028, 1319, 1350
Tru1I TTAA 9 cut(s) 294, 387, 750, 906, 987, 1077, 1394, 1478, 1512
Tru9I TTAA 9 cut(s) 294, 387, 750, 906, 987, 1077, 1394, 1478, 1512
TscAI CASTG 5 cut(s) 148, 208, 352, 484, 849
TseFI GTSAC 2 cut(s) 27, 797
TseI GCWGC 3 cut(s) 765, 833, 1360
Tsp45I GTSAC 2 cut(s) 27, 797
TspDTI ATGAA 5 cut(s) 368, 389, 424, 1281, 1419
TspGWI ACGGA 1 cut(s) 59
TspRI CASTG 5 cut(s) 148, 208, 352, 484, 849
Vha464I CTTAAG 1 cut(s) 1393
VneI GTGCAC 1 cut(s) 1290
VpaK11BI GGWCC 2 cut(s) 39, 138
VspI ATTAAT 1 cut(s) 906
XagI CCTNNNNNAGG 2 cut(s) 498, 1266
XapI RAATTY 1 cut(s) 670
XhoI CTCGAG 1 cut(s) 1328
XmiI GTMKAC 1 cut(s) 394
XspI CTAG 5 cut(s) 617, 762, 983, 1043, 1308
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.