AT5G27750

response to UV-B

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000062
Physical Location & Seq
Forward (+)
9828229 .. 9830259
2031 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G27750.2

Sequence Viewer

Length: 1380 bp
ATGCCTGGGTTCGATAGAATTAGCGAATTACCGGAATCTCTGATTACTCAAATACTCTTATGCCTTCCGACTAAAGATTCGGTGAAGACGAGTGTTTTATCGACTAGGTGGAAGAATCTATGGCTAAATGTTCCCGGACTTGACTTAACTTGCAGTGATTTCCCTTTTGAAGATGAAGAATATGAACAAGTGTTCATTAACTTCATCGACAGGTTTCTAGAGTTTAATCCTGAGTCACGCCTGCAAACATTCGAGGTAGATTACAAAAGGCGTGAGATACGCGGGTTCAAGGATCGGATCGGTACAGCGATTAACCGCGGAATTCGACTTCTAGATGCTGTGAGTAGTACCATGTATTGGGAGGAGGAATGCATTATGTATCCTTATTTGGAGTTCATGCCTCTGAATCTCTTTACAAGCAAGACGTTGGTTACTTTAAAGCTCCGGGATTCGGCTCTTAACGATCCGGGTTTGCTTTCTATGCCTTGTCTTAAGTTCATGATTCTTCGTGAAGTTCGATGGTCTGGTACCATGAGTCTTGAGAAGCTTGTCTCTGGATGTCCTGTTCTTGAAGACCTGACCTTGGTAAGGACCTTGATATGTCATATTGATGACGATGAATTGCCGGTTACTCGTGTGAGATCTCGGAGTCTGAAGACGTTTTATGTTCCGCTCGCGTATGGAGTAGGTTGTAGGTCAAGAGTCCCAGACAAAGTACTTGAGATTGATGCTCCAGGACTAGAGAATATGACTCTCAAAGAAGACCATTTCGATGGAATCGTGGTAAAGAACCTGACTTCTTTGTTCATGATTGAACTTAATATCAAGTTTGCTGTCGATTACCGCAGGAGTTTTGATCCAGAGGACTTATCGAAGAGAAATGAAATTGGTGATTTTCTCACTGGGATATCTCGTGCAAGACATATGATCATCTCTCAGAAAACAGTGAAGGCTCTTGAAAGTTACTCAAAAGTTGGATCGATTCCCAAATTCAATAACTTGTCACATTTAAAAGCTGTGTTCCCGAGCCCCTTGTTACCGTTCTTGCCAGCCTTTCTTGAGAGTTTCCCGAATCTGAAAAACCTAATCTTGAAGATTGCTTTTGCAAAGGATGATGAGACGGAGGAGCTGAATCTCATAAACGTGCCTCGGTGTATCGTATCGACTCTCGAGTGTGTTGAGATAAAAGGATTGTTTGAATGGGAGGAAGAGGAGATGAAAATAGCGAGGTACTTTCTTGAAAACGCAGCAGTCCTCAAGAAACTTACTATGAGTTTTATAGACTACCCTCGATATGCTTCAAATTCAGATGTCTACGAGGACCTTGATAAACTCACAAAACGTTCTCAACAATGTCGAATTATCGTTGATGATGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF647

Protein Analysis

459

Amino Acids

53.04

Weight (kDa)

5.18

Isoelectric Point (pI)

54.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 7 - 44 1.8e-07 F-box domain
LRR_At5g56370 PF24758 132 - 256 1.6e-09 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 163 - 188 7.1e-06 Leucine Rich Repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 527
AccB1I GGYRCC 1 cut(s) 527
AccB7I CCANNNNNTGG 1 cut(s) 357
AccBSI CCGCTC 1 cut(s) 673
AccI GTMKAC 1 cut(s) 1314
AccII CGCG 3 cut(s) 282, 318, 677
AciI CCGC 5 cut(s) 282, 316, 318, 671, 844
AclI AACGTT 1 cut(s) 1342
AclWI GGATC 5 cut(s) 300, 305, 458, 851, 985
AcsI RAATTY 3 cut(s) 321, 989, 1303
AcuI CTGAAG 1 cut(s) 674
AfaI GTAC 5 cut(s) 304, 349, 529, 717, 1232
AfiI CCNNNNNNNGG 4 cut(s) 357, 451, 583, 588
AflII CTTAAG 1 cut(s) 491
AjnI CCWGG 2 cut(s) 4, 733
AloI GAACNNNNNNTCC 2 cut(s) 549, 581
AluBI AGCT 4 cut(s) 442, 547, 1016, 1129
AluI AGCT 4 cut(s) 442, 547, 1016, 1129
Alw26I GTCTC 2 cut(s) 556, 1112
AlwI GGATC 5 cut(s) 300, 305, 458, 851, 985
Ama87I CYCGRG 2 cut(s) 1024, 1169
ApeKI GCWGC 1 cut(s) 1247
ApoI RAATTY 3 cut(s) 321, 989, 1303
ArsI GACNNNNNNTTYG 2 cut(s) 61, 93
Asp718I GGTACC 1 cut(s) 527
AspS9I GGNCC 2 cut(s) 591, 1321
AsuC2I CCSGG 3 cut(s) 135, 446, 468
AsuHPI GGTGA 2 cut(s) 94, 902
AvaI CYCGRG 2 cut(s) 1024, 1169
AvaII GGWCC 2 cut(s) 591, 1321
BaeI ACNNNNGTAYC 2 cut(s) 269, 302
BanI GGYRCC 1 cut(s) 527
BanII GRGCYC 1 cut(s) 1031
BauI CACGAG 2 cut(s) 633, 912
BbsI GAAGAC 4 cut(s) 92, 579, 662, 768
BbvI GCAGC 1 cut(s) 1259
BccI CCATC 2 cut(s) 513, 767
BciT130I CCWGG 2 cut(s) 6, 735
BciVI GTATCC 1 cut(s) 390
BclI TGATCA 1 cut(s) 927
BcnI CCSGG 3 cut(s) 135, 446, 468
BcoDI GTCTC 2 cut(s) 556, 1112
BfaI CTAG 4 cut(s) 105, 218, 332, 740
BfrI CTTAAG 1 cut(s) 491
BfuI GTATCC 1 cut(s) 390
BglII AGATCT 1 cut(s) 641
BisI GCNGC 1 cut(s) 1248
BlsI GCNGC 1 cut(s) 1249
BmcAI AGTACT 1 cut(s) 717
Bme1390I CCNGG 5 cut(s) 6, 135, 446, 468, 735
Bme18I GGWCC 2 cut(s) 591, 1321
BmeT110I CYCGRG 2 cut(s) 1024, 1169
BmgT120I GGNCC 2 cut(s) 591, 1321
BmiI GGNNCC 1 cut(s) 529
BmrFI CCNGG 5 cut(s) 6, 135, 446, 468, 735
BmrI ACTGGG 1 cut(s) 912
BmsI GCATC 2 cut(s) 325, 718
BmuI ACTGGG 1 cut(s) 912
BpiI GAAGAC 4 cut(s) 92, 579, 662, 768
BpmI CTGGAG 1 cut(s) 717
BpuEI CTTGAG 4 cut(s) 560, 740, 1079, 1241
BpuMI CCSGG 3 cut(s) 135, 446, 468
Bsa29I ATCGAT 1 cut(s) 980
BsaJI CCNNGG 4 cut(s) 5, 316, 582, 1148
BsaWI WCCGGW 1 cut(s) 31
Bsc4I CCNNNNNNNGG 4 cut(s) 357, 451, 583, 588
Bse118I RCCGGY 1 cut(s) 625
Bse1I ACTGG 1 cut(s) 907
BseBI CCWGG 2 cut(s) 6, 735
BseCI ATCGAT 1 cut(s) 980
BseDI CCNNGG 4 cut(s) 5, 316, 582, 1148
BseGI GGATG 2 cut(s) 563, 1117
BseLI CCNNNNNNNGG 4 cut(s) 357, 451, 583, 588
BseMII CTCAG 2 cut(s) 222, 950
BseNI ACTGG 1 cut(s) 907
BseRI GAGGAG 3 cut(s) 377, 1139, 1226
BseXI GCAGC 1 cut(s) 1259
Bsh1236I CGCG 3 cut(s) 282, 318, 677
BshNI GGYRCC 1 cut(s) 527
BshVI ATCGAT 1 cut(s) 980
BsiHKCI CYCGRG 2 cut(s) 1024, 1169
BsiSI CCGG 5 cut(s) 32, 135, 445, 467, 626
BslFI GGGAC 1 cut(s) 689
BslI CCNNNNNNNGG 4 cut(s) 357, 451, 583, 588
BsmAI GTCTC 2 cut(s) 556, 1112
BsmBI CGTCTC 1 cut(s) 1112
BsmFI GGGAC 1 cut(s) 689
BsmI GAATGC 1 cut(s) 374
BsoBI CYCGRG 2 cut(s) 1024, 1169
Bsp1286I GDGCHC 1 cut(s) 1031
Bsp143I GATC 7 cut(s) 292, 297, 463, 641, 856, 927, 977
BspACI CCGC 5 cut(s) 282, 316, 318, 671, 844
BspCNI CTCAG 2 cut(s) 223, 949
BspDI ATCGAT 1 cut(s) 980
BspFNI CGCG 3 cut(s) 282, 318, 677
BspHI TCATGA 2 cut(s) 498, 807
BspLI GGNNCC 1 cut(s) 529
BspPI GGATC 5 cut(s) 300, 305, 458, 851, 985
BspT107I GGYRCC 1 cut(s) 527
BspTI CTTAAG 1 cut(s) 491
BsrBI CCGCTC 1 cut(s) 673
BsrFI RCCGGY 1 cut(s) 625
BsrI ACTGG 1 cut(s) 907
BssAI RCCGGY 1 cut(s) 625
BssECI CCNNGG 4 cut(s) 5, 316, 582, 1148
BssMI GATC 7 cut(s) 292, 297, 463, 641, 856, 927, 977
BssSI CACGAG 2 cut(s) 633, 912
BssT1I CCWWGG 1 cut(s) 582
Bst2BI CACGAG 2 cut(s) 633, 912
Bst2UI CCWGG 2 cut(s) 6, 735
Bst4CI ACNGT 2 cut(s) 946, 1041
Bst6I CTCTTC 2 cut(s) 869, 1203
BstAFI CTTAAG 1 cut(s) 491
BstC8I GCNNGC 3 cut(s) 242, 675, 1050
BstDEI CTNAG 2 cut(s) 231, 936
BstDSI CCRYGG 1 cut(s) 316
BstENI CCTNNNNNAGG 1 cut(s) 586
BstF5I GGATG 2 cut(s) 563, 1117
BstFNI CGCG 3 cut(s) 282, 318, 677
BstKTI GATC 7 cut(s) 295, 300, 466, 644, 859, 930, 980
BstMAI GTCTC 2 cut(s) 556, 1112
BstMBI GATC 7 cut(s) 292, 297, 463, 641, 856, 927, 977
BstMWI GCNNNNNNNGC 1 cut(s) 481
BstNI CCWGG 2 cut(s) 6, 735
BstSCI CCNGG 5 cut(s) 4, 133, 444, 466, 733
BstUI CGCG 3 cut(s) 282, 318, 677
BstV1I GCAGC 1 cut(s) 1259
BstV2I GAAGAC 4 cut(s) 92, 579, 662, 768
BstX2I RGATCY 1 cut(s) 641
BstXI CCANNNNNNTGG 1 cut(s) 773
BstYI RGATCY 1 cut(s) 641
Bsu15I ATCGAT 1 cut(s) 980
BsuI GTATCC 1 cut(s) 390
BsuTUI ATCGAT 1 cut(s) 980
BtgI CCRYGG 1 cut(s) 316
BtsCI GGATG 2 cut(s) 563, 1117
BtsI GCAGTG 1 cut(s) 160
BtsIMutI CAGTG 3 cut(s) 160, 900, 951
Cac8I GCNNGC 3 cut(s) 242, 675, 1050
CciI TCATGA 2 cut(s) 498, 807
Cfr10I RCCGGY 1 cut(s) 625
Cfr13I GGNCC 2 cut(s) 591, 1321
Cfr42I CCGCGG 1 cut(s) 319
ClaI ATCGAT 1 cut(s) 980
Csp6I GTAC 5 cut(s) 303, 348, 528, 716, 1231
CviAII CATG 5 cut(s) 352, 397, 499, 532, 808
CviJI RGCY 9 cut(s) 124, 442, 455, 547, 953, 1016, 1029, 1052, 1129
CviKI_1 RGCY 9 cut(s) 124, 442, 455, 547, 953, 1016, 1029, 1052, 1129
CviQI GTAC 5 cut(s) 303, 348, 528, 716, 1231
DdeI CTNAG 2 cut(s) 231, 936
DpnI GATC 7 cut(s) 294, 299, 465, 643, 858, 929, 979
DpnII GATC 7 cut(s) 292, 297, 463, 641, 856, 927, 977
DraI TTTAAA 2 cut(s) 438, 1011
Eam1104I CTCTTC 2 cut(s) 869, 1203
EarI CTCTTC 2 cut(s) 869, 1203
Eco130I CCWWGG 1 cut(s) 582
Eco24I GRGCYC 1 cut(s) 1031
Eco32I GATATC 1 cut(s) 909
Eco47I GGWCC 2 cut(s) 591, 1321
Eco57I CTGAAG 1 cut(s) 674
Eco88I CYCGRG 2 cut(s) 1024, 1169
EcoNI CCTNNNNNAGG 1 cut(s) 586
EcoO109I RGGNCCY 2 cut(s) 591, 1321
EcoRI GAATTC 1 cut(s) 321
EcoRII CCWGG 2 cut(s) 4, 733
EcoRV GATATC 1 cut(s) 909
EcoT14I CCWWGG 1 cut(s) 582
EcoT22I ATGCAT 1 cut(s) 374
EcoT38I GRGCYC 1 cut(s) 1031
ErhI CCWWGG 1 cut(s) 582
Esp3I CGTCTC 1 cut(s) 1112
FaeI CATG 5 cut(s) 355, 400, 502, 535, 811
FaqI GGGAC 1 cut(s) 689
FatI CATG 5 cut(s) 351, 396, 498, 531, 807
FauI CCCGC 1 cut(s) 275
FauNDI CATATG 1 cut(s) 924
FbaI TGATCA 1 cut(s) 927
FblI GTMKAC 1 cut(s) 1314
Fnu4HI GCNGC 1 cut(s) 1248
FokI GGATG 2 cut(s) 570, 1124
FriOI GRGCYC 1 cut(s) 1031
Fsp4HI GCNGC 1 cut(s) 1248
FspBI CTAG 4 cut(s) 105, 218, 332, 740
GluI GCNGC 1 cut(s) 1248
GsuI CTGGAG 1 cut(s) 717
HapII CCGG 5 cut(s) 32, 135, 445, 467, 626
Hin1II CATG 5 cut(s) 355, 400, 502, 535, 811
HindIII AAGCTT 1 cut(s) 545
HpaII CCGG 5 cut(s) 32, 135, 445, 467, 626
HphI GGTGA 2 cut(s) 94, 902
Hpy166II GTNNAC 1 cut(s) 1315
Hpy188I TCNGA 9 cut(s) 42, 69, 297, 405, 648, 654, 939, 1077, 1309
Hpy8I GTNNAC 1 cut(s) 1315
HpyAV CCTTC 2 cut(s) 74, 943
HpyCH4III ACNGT 2 cut(s) 946, 1041
HpyCH4IV ACGT 4 cut(s) 425, 659, 1143, 1342
HpyCH4V TGCA 5 cut(s) 153, 244, 372, 917, 1106
HpyF10VI GCNNNNNNNGC 1 cut(s) 481
HpyF3I CTNAG 2 cut(s) 231, 936
HpySE526I ACGT 4 cut(s) 425, 659, 1143, 1342
Hsp92II CATG 5 cut(s) 355, 400, 502, 535, 811
KpnI GGTACC 1 cut(s) 531
Ksp22I TGATCA 1 cut(s) 927
KspI CCGCGG 1 cut(s) 319
Kzo9I GATC 7 cut(s) 292, 297, 463, 641, 856, 927, 977
LmnI GCTCC 3 cut(s) 447, 736, 1126
Lsp1109I GCAGC 1 cut(s) 1259
LweI GCATC 2 cut(s) 325, 718
MaeI CTAG 4 cut(s) 105, 218, 332, 740
MaeII ACGT 4 cut(s) 425, 659, 1143, 1342
MaeIII GTNAC 6 cut(s) 234, 430, 628, 962, 1002, 1035
MalI GATC 7 cut(s) 294, 299, 465, 643, 858, 929, 979
MbiI CCGCTC 1 cut(s) 673
MboI GATC 7 cut(s) 292, 297, 463, 641, 856, 927, 977
MflI RGATCY 1 cut(s) 641
MhlI GDGCHC 1 cut(s) 1031
MluCI AATT 8 cut(s) 18, 26, 321, 620, 885, 989, 1303, 1359
MlyI GAGTC 6 cut(s) 242, 544, 658, 711, 745, 1159
MmeI TCCRAC 2 cut(s) 92, 955
Mph1103I ATGCAT 1 cut(s) 374
MseI TTAA 9 cut(s) 146, 198, 225, 312, 437, 459, 492, 819, 1010
MslI CAYNNNNRTG 3 cut(s) 609, 771, 1142
MspA1I CMGCKG 1 cut(s) 318
MspCI CTTAAG 1 cut(s) 491
MspI CCGG 5 cut(s) 32, 135, 445, 467, 626
MspR9I CCNGG 5 cut(s) 6, 135, 446, 468, 735
Mva1269I GAATGC 1 cut(s) 374
MvaI CCWGG 2 cut(s) 6, 735
MvnI CGCG 3 cut(s) 282, 318, 677
MwoI GCNNNNNNNGC 1 cut(s) 481
NciI CCSGG 3 cut(s) 135, 446, 468
NdeI CATATG 1 cut(s) 924
NdeII GATC 7 cut(s) 292, 297, 463, 641, 856, 927, 977
NlaIII CATG 5 cut(s) 355, 400, 502, 535, 811
NlaIV GGNNCC 1 cut(s) 529
NmuCI GTSAC 2 cut(s) 234, 1002
NsiI ATGCAT 1 cut(s) 374
PaeR7I CTCGAG 1 cut(s) 1169
PagI TCATGA 2 cut(s) 498, 807
PcsI WCGNNNNNNNCGW 3 cut(s) 86, 514, 777
PctI GAATGC 1 cut(s) 374
PflMI CCANNNNNTGG 1 cut(s) 357
PfoI TCCNGGA 3 cut(s) 133, 444, 733
PkrI GCNGC 1 cut(s) 1249
PleI GAGTC 6 cut(s) 241, 543, 657, 710, 745, 1159
PpsI GAGTC 6 cut(s) 241, 543, 657, 710, 745, 1159
PpuMI RGGWCCY 2 cut(s) 591, 1321
Psp1406I AACGTT 1 cut(s) 1342
Psp5II RGGWCCY 2 cut(s) 591, 1321
Psp6I CCWGG 2 cut(s) 4, 733
PspGI CCWGG 2 cut(s) 4, 733
PspN4I GGNNCC 1 cut(s) 529
PspPI GGNCC 2 cut(s) 591, 1321
PspPPI RGGWCCY 2 cut(s) 591, 1321
PsuI RGATCY 1 cut(s) 641
RsaI GTAC 5 cut(s) 304, 349, 529, 717, 1232
RsaNI GTAC 5 cut(s) 303, 348, 528, 716, 1231
RseI CAYNNNNRTG 3 cut(s) 609, 771, 1142
SacII CCGCGG 1 cut(s) 319
SaqAI TTAA 9 cut(s) 146, 198, 225, 312, 437, 459, 492, 819, 1010
SatI GCNGC 1 cut(s) 1248
Sau3AI GATC 7 cut(s) 292, 297, 463, 641, 856, 927, 977
Sau96I GGNCC 2 cut(s) 591, 1321
ScaI AGTACT 1 cut(s) 717
SchI GAGTC 6 cut(s) 242, 544, 658, 711, 745, 1159
ScrFI CCNGG 5 cut(s) 6, 135, 446, 468, 735
SduI GDGCHC 1 cut(s) 1031
SfaNI GCATC 2 cut(s) 325, 718
Sfr274I CTCGAG 1 cut(s) 1169
Sfr303I CCGCGG 1 cut(s) 319
SgrBI CCGCGG 1 cut(s) 319
SinI GGWCC 2 cut(s) 591, 1321
SlaI CTCGAG 1 cut(s) 1169
SmiMI CAYNNNNRTG 3 cut(s) 609, 771, 1142
SmlI CTYRAG 6 cut(s) 491, 539, 719, 1058, 1169, 1256
SmoI CTYRAG 6 cut(s) 491, 539, 719, 1058, 1169, 1256
Sse9I AATT 8 cut(s) 18, 26, 321, 620, 885, 989, 1303, 1359
SsiI CCGC 5 cut(s) 282, 316, 318, 671, 844
SspMI CTAG 4 cut(s) 105, 218, 332, 740
StyD4I CCNGG 5 cut(s) 4, 133, 444, 466, 733
StyI CCWWGG 1 cut(s) 582
TaaI ACNGT 2 cut(s) 946, 1041
TaiI ACGT 4 cut(s) 428, 662, 1146, 1345
TasI AATT 8 cut(s) 18, 26, 321, 620, 885, 989, 1303, 1359
TatI WGTACW 1 cut(s) 715
Tru1I TTAA 9 cut(s) 146, 198, 225, 312, 437, 459, 492, 819, 1010
Tru9I TTAA 9 cut(s) 146, 198, 225, 312, 437, 459, 492, 819, 1010
TscAI CASTG 3 cut(s) 160, 907, 951
TseFI GTSAC 2 cut(s) 234, 1002
TseI GCWGC 1 cut(s) 1247
Tsp45I GTSAC 2 cut(s) 234, 1002
TspGWI ACGGA 1 cut(s) 1136
TspRI CASTG 3 cut(s) 160, 907, 951
Van91I CCANNNNNTGG 1 cut(s) 357
Vha464I CTTAAG 1 cut(s) 491
VpaK11BI GGWCC 2 cut(s) 591, 1321
XagI CCTNNNNNAGG 1 cut(s) 586
XapI RAATTY 3 cut(s) 321, 989, 1303
XbaI TCTAGA 2 cut(s) 217, 331
XhoI CTCGAG 1 cut(s) 1169
XmiI GTMKAC 1 cut(s) 1314
XspI CTAG 4 cut(s) 105, 218, 332, 740
ZrmI AGTACT 1 cut(s) 717
Zsp2I ATGCAT 1 cut(s) 374
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.