AT5G44950

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000062
Physical Location & Seq
Forward (+)
18151665 .. 18153164
1500 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G44950.1

Sequence Viewer

Length: 1317 bp
ATGGGGCGCGATAGGATCAGCGAATTACCAGATGGTTTGCTAAATCATATACTCATGTACCTTCACATCGAAGAATCTATTAGGACAAGTGTTTTATCTAGCAGATGGAGAAAACTCTGGCTTAAGGTACCTGGTCTTGACGTGAACGTACATGACTTCCCTGCTGATGGAAACTTATTTGAGAGCTTGATGGACAAGTTTCTTGAGGTTAACCGCGGACGCCTACAAAATTTCAAGTTAAACTATGAAAGTAATTTGTATTATCTAATGGACAGATTTGTGCCGTGGATCGCTACAGTCGTTGATCGCGGTATTCAGCATCTAGATGTTACGGCCACTGATTGTCCTCCATGGACCATTGATTTTATGCCTGCCAACATTTGCAAGAGCAAGACGTTGGTGTCTTTAAAGCTCGTAAATGTAGGGCTTGACACTCCAAAGTTTGTTGTTTCTCTACCTTGTCTTAAGATCATGCATCTTGAAGACATTTTTTATAGTCCTTTGATTGCGGAGAACCTCATCTCAGGCTGTCCTGTTCTTGAAGATCTTACCATTGTAAGGAATCATGAGGATTTTCTTAACTTTCTGCGTGTGATGTCTCAAACTTTGAAGAACTTCCGTTTAACATTTGATTGGGGAATGGGTAGTAACGATTTTTCGGTCGAGATTGATGCACCAGGACTTAAGTACATGAGTTTTAGAGATAGTCAATCTGATAGAATAGTTGTAAAAAATTTGAGTTCCTTGGTCAAGATAGACCTTGATACTGAATTTAATCTCAAGTTTGGCCTCGGCAGTCCTTTGGAACCGGAGGACTTGACTAAGAGAGATATTATCCGAGATTTTCTTACCGGTATTTCGAGTGTCAAACATATGATCATCTCTCATCCTACTCTGGAGGTGCTTTATCGTTATTCCAAAATCGGACAGCTTCCAAAATTCCATAACTTATATCATTTGCAAGCTGTGTTCTCCAGCTCATTGTTACAACTATTGCCCGCCTTCCTAGAAATCTGCCCAAATCTAAAAAACCTCATCTTGGACTATTCTATTTCAGCAGAGCCAGAGCAAATCGACTTTACCAATCTGCCTCGGTGTTTAATTTCGACGCTGGAGTACGTTGAGATTAAACAACTTACTATGAGGGAGGAAAGTGGGATTAAATTGGTGAAATACTTTCTTGAGAATTCAGCAGTCCTCAAGAAACTGACTCTGAGTTTCATAGATTCTCCCATGACCAACCAAGAGTCAGAGATCTACATGCAGCTTCTTACATCAACAAAACGATCTCGTGGGTGTCATGTTTTGATCTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

438

Amino Acids

50.38

Weight (kDa)

5.92

Isoelectric Point (pI)

47.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 43 1.7e-06 F-box domain
LRR_At5g56370 PF24758 96 - 233 6.8e-13 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 362 - 405 1.3e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1315
AasI GACNNNNNNGTC 1 cut(s) 400
Acc65I GGTACC 1 cut(s) 127
AccB1I GGYRCC 1 cut(s) 127
AccII CGCG 3 cut(s) 9, 216, 309
AciI CCGC 5 cut(s) 214, 216, 309, 509, 999
AclWI GGATC 2 cut(s) 23, 296
AcoI YGGCCR 1 cut(s) 333
AcsI RAATTY 5 cut(s) 229, 733, 770, 938, 1186
AcyI GRCGYC 1 cut(s) 220
AfaI GTAC 5 cut(s) 59, 129, 150, 689, 1118
AfiI CCNNNNNNNGG 3 cut(s) 167, 558, 1039
AflII CTTAAG 3 cut(s) 122, 464, 683
AgeI ACCGGT 1 cut(s) 851
AgsI TTSAA 4 cut(s) 235, 482, 542, 610
AjiI CACGTC 1 cut(s) 142
AjnI CCWGG 2 cut(s) 130, 676
AluBI AGCT 6 cut(s) 186, 412, 931, 965, 978, 1267
AluI AGCT 6 cut(s) 186, 412, 931, 965, 978, 1267
Alw26I GTCTC 1 cut(s) 603
AlwI GGATC 2 cut(s) 23, 296
AoxI GGCC 2 cut(s) 333, 787
ApeKI GCWGC 1 cut(s) 1264
ApoI RAATTY 5 cut(s) 229, 733, 770, 938, 1186
AsiGI ACCGGT 1 cut(s) 851
Asp700I GAANNNNTTC 1 cut(s) 614
Asp718I GGTACC 1 cut(s) 127
AspLEI GCGC 1 cut(s) 9
AspS9I GGNCC 1 cut(s) 354
AsuHPI GGTGA 1 cut(s) 1180
AvaII GGWCC 1 cut(s) 354
BaeI ACNNNNGTAYC 2 cut(s) 41, 74
BanI GGYRCC 1 cut(s) 127
BauI CACGAG 1 cut(s) 1290
BbsI GAAGAC 1 cut(s) 489
BbvI GCAGC 1 cut(s) 1276
BccI CCATC 4 cut(s) 26, 99, 161, 184
BceAI ACGGC 2 cut(s) 268, 348
BcgI CGANNNNNNTGC 2 cut(s) 653, 687
BciT130I CCWGG 2 cut(s) 132, 678
BclI TGATCA 1 cut(s) 876
BcoDI GTCTC 1 cut(s) 603
BfaI CTAG 3 cut(s) 99, 323, 1007
BfmI CTRYAG 1 cut(s) 294
BfrI CTTAAG 3 cut(s) 122, 464, 683
BglII AGATCT 2 cut(s) 544, 1254
BisI GCNGC 1 cut(s) 1265
BlsI GCNGC 1 cut(s) 1266
Bme1390I CCNGG 2 cut(s) 132, 678
Bme18I GGWCC 1 cut(s) 354
BmgBI CACGTC 1 cut(s) 142
BmgT120I GGNCC 1 cut(s) 354
BmiI GGNNCC 2 cut(s) 129, 807
BmrFI CCNGG 2 cut(s) 132, 678
BmsI GCATC 3 cut(s) 328, 484, 661
BpiI GAAGAC 1 cut(s) 489
BpmI CTGGAG 3 cut(s) 917, 958, 1133
BpuEI CTTGAG 4 cut(s) 224, 764, 1184, 1202
BsaHI GRCGYC 1 cut(s) 220
BsaJI CCNNGG 6 cut(s) 214, 284, 350, 744, 790, 1091
BsaWI WCCGGW 2 cut(s) 808, 851
Bsc4I CCNNNNNNNGG 3 cut(s) 167, 558, 1039
Bse118I RCCGGY 1 cut(s) 851
BseBI CCWGG 2 cut(s) 132, 678
BseDI CCNNGG 6 cut(s) 214, 284, 350, 744, 790, 1091
BseGI GGATG 1 cut(s) 886
BseLI CCNNNNNNNGG 3 cut(s) 167, 558, 1039
BseMII CTCAG 2 cut(s) 537, 1205
BseXI GCAGC 1 cut(s) 1276
Bsh1236I CGCG 3 cut(s) 9, 216, 309
Bsh1285I CGRYCG 1 cut(s) 663
BshFI GGCC 2 cut(s) 335, 789
BshNI GGYRCC 1 cut(s) 127
BshTI ACCGGT 1 cut(s) 851
BsiEI CGRYCG 1 cut(s) 663
BsiSI CCGG 2 cut(s) 809, 852
BslI CCNNNNNNNGG 3 cut(s) 167, 558, 1039
BsmAI GTCTC 1 cut(s) 603
BsnI GGCC 2 cut(s) 335, 789
Bsp143I GATC 9 cut(s) 15, 288, 304, 468, 544, 876, 1254, 1286, 1308
Bsp19I CCATGG 1 cut(s) 350
BspACI CCGC 5 cut(s) 214, 216, 309, 509, 999
BspANI GGCC 2 cut(s) 335, 789
BspCNI CTCAG 2 cut(s) 536, 1206
BspFNI CGCG 3 cut(s) 9, 216, 309
BspHI TCATGA 1 cut(s) 565
BspLI GGNNCC 2 cut(s) 129, 807
BspPI GGATC 2 cut(s) 23, 296
BspT107I GGYRCC 1 cut(s) 127
BspTI CTTAAG 3 cut(s) 122, 464, 683
BsrFI RCCGGY 1 cut(s) 851
BssAI RCCGGY 1 cut(s) 851
BssECI CCNNGG 6 cut(s) 214, 284, 350, 744, 790, 1091
BssMI GATC 9 cut(s) 15, 288, 304, 468, 544, 876, 1254, 1286, 1308
BssNI GRCGYC 1 cut(s) 220
BssSI CACGAG 1 cut(s) 1290
BssT1I CCWWGG 2 cut(s) 350, 744
Bst2BI CACGAG 1 cut(s) 1290
Bst2UI CCWGG 2 cut(s) 132, 678
Bst4CI ACNGT 1 cut(s) 298
BstACI GRCGYC 1 cut(s) 220
BstAFI CTTAAG 3 cut(s) 122, 464, 683
BstC8I GCNNGC 3 cut(s) 372, 963, 999
BstDEI CTNAG 3 cut(s) 523, 822, 1214
BstDSI CCRYGG 3 cut(s) 214, 284, 350
BstF5I GGATG 1 cut(s) 886
BstFNI CGCG 3 cut(s) 9, 216, 309
BstHHI GCGC 1 cut(s) 9
BstKTI GATC 9 cut(s) 18, 291, 307, 471, 547, 879, 1257, 1289, 1311
BstMAI GTCTC 1 cut(s) 603
BstMBI GATC 9 cut(s) 15, 288, 304, 468, 544, 876, 1254, 1286, 1308
BstMCI CGRYCG 1 cut(s) 663
BstNI CCWGG 2 cut(s) 132, 678
BstNSI RCATGY 1 cut(s) 1264
BstSCI CCNGG 2 cut(s) 130, 676
BstSFI CTRYAG 1 cut(s) 294
BstUI CGCG 3 cut(s) 9, 216, 309
BstV1I GCAGC 1 cut(s) 1276
BstV2I GAAGAC 1 cut(s) 489
BstX2I RGATCY 2 cut(s) 544, 1254
BstYI RGATCY 2 cut(s) 544, 1254
BsuRI GGCC 2 cut(s) 335, 789
BtgI CCRYGG 3 cut(s) 214, 284, 350
BtrI CACGTC 1 cut(s) 142
BtsCI GGATG 1 cut(s) 886
BtsIMutI CAGTG 1 cut(s) 336
Cac8I GCNNGC 3 cut(s) 372, 963, 999
CciI TCATGA 1 cut(s) 565
CfoI GCGC 1 cut(s) 9
Cfr10I RCCGGY 1 cut(s) 851
Cfr13I GGNCC 1 cut(s) 354
Cfr42I CCGCGG 1 cut(s) 217
CseI GACGC 2 cut(s) 228, 1117
CsiI ACCWGGT 1 cut(s) 130
Csp6I GTAC 5 cut(s) 58, 128, 149, 688, 1117
CspAI ACCGGT 1 cut(s) 851
CviAII CATG 9 cut(s) 55, 152, 351, 472, 566, 691, 1234, 1261, 1301
CviQI GTAC 5 cut(s) 58, 128, 149, 688, 1117
DdeI CTNAG 3 cut(s) 523, 822, 1214
DpnI GATC 9 cut(s) 17, 290, 306, 470, 546, 878, 1256, 1288, 1310
DpnII GATC 9 cut(s) 15, 288, 304, 468, 544, 876, 1254, 1286, 1308
DraI TTTAAA 1 cut(s) 408
DrdI GACNNNNNNGTC 1 cut(s) 400
DseDI GACNNNNNNGTC 1 cut(s) 400
EaeI YGGCCR 1 cut(s) 333
Eco130I CCWWGG 2 cut(s) 350, 744
Eco47I GGWCC 1 cut(s) 354
EcoRI GAATTC 1 cut(s) 1186
EcoRII CCWGG 2 cut(s) 130, 676
EcoT14I CCWWGG 2 cut(s) 350, 744
EcoT22I ATGCAT 1 cut(s) 477
ErhI CCWWGG 2 cut(s) 350, 744
FaeI CATG 9 cut(s) 58, 155, 354, 475, 569, 694, 1237, 1264, 1304
FatI CATG 9 cut(s) 54, 151, 350, 471, 565, 690, 1233, 1260, 1300
FauI CCCGC 1 cut(s) 1006
FauNDI CATATG 1 cut(s) 873
FbaI TGATCA 1 cut(s) 876
Fnu4HI GCNGC 1 cut(s) 1265
FokI GGATG 1 cut(s) 873
Fsp4HI GCNGC 1 cut(s) 1265
FspBI CTAG 3 cut(s) 99, 323, 1007
GlaI GCGC 1 cut(s) 8
GluI GCNGC 1 cut(s) 1265
GsuI CTGGAG 3 cut(s) 917, 958, 1133
HaeIII GGCC 2 cut(s) 335, 789
HapII CCGG 2 cut(s) 809, 852
HgaI GACGC 2 cut(s) 228, 1117
HhaI GCGC 1 cut(s) 9
Hin1I GRCGYC 1 cut(s) 220
Hin1II CATG 9 cut(s) 58, 155, 354, 475, 569, 694, 1237, 1264, 1304
Hin6I GCGC 1 cut(s) 7
HinP1I GCGC 1 cut(s) 7
HincII GTYRAC 1 cut(s) 211
HindII GTYRAC 1 cut(s) 211
HinfI GANTC 5 cut(s) 74, 562, 1210, 1226, 1247
HpaI GTTAAC 1 cut(s) 211
HpaII CCGG 2 cut(s) 809, 852
HphI GGTGA 1 cut(s) 1180
Hpy166II GTNNAC 2 cut(s) 145, 211
Hpy188I TCNGA 5 cut(s) 715, 839, 926, 1215, 1252
Hpy8I GTNNAC 2 cut(s) 145, 211
Hpy99I CGWCG 1 cut(s) 1111
HpyAV CCTTC 2 cut(s) 71, 1012
HpyCH4III ACNGT 1 cut(s) 298
HpyCH4IV ACGT 4 cut(s) 141, 147, 395, 1119
HpyCH4V TGCA 5 cut(s) 384, 475, 674, 961, 1264
HpyF3I CTNAG 3 cut(s) 523, 822, 1214
HpySE526I ACGT 4 cut(s) 141, 147, 395, 1119
Hsp92I GRCGYC 1 cut(s) 220
Hsp92II CATG 9 cut(s) 58, 155, 354, 475, 569, 694, 1237, 1264, 1304
HspAI GCGC 1 cut(s) 7
KpnI GGTACC 1 cut(s) 131
Ksp22I TGATCA 1 cut(s) 876
KspAI GTTAAC 1 cut(s) 211
KspI CCGCGG 1 cut(s) 217
Kzo9I GATC 9 cut(s) 15, 288, 304, 468, 544, 876, 1254, 1286, 1308
Lsp1109I GCAGC 1 cut(s) 1276
LweI GCATC 3 cut(s) 328, 484, 661
MabI ACCWGGT 1 cut(s) 130
MaeI CTAG 3 cut(s) 99, 323, 1007
MaeII ACGT 4 cut(s) 141, 147, 395, 1119
MaeIII GTNAC 3 cut(s) 328, 647, 984
MalI GATC 9 cut(s) 17, 290, 306, 470, 546, 878, 1256, 1288, 1310
MboI GATC 9 cut(s) 15, 288, 304, 468, 544, 876, 1254, 1286, 1308
MboII GAAGA 4 cut(s) 83, 494, 554, 622
MflI RGATCY 2 cut(s) 544, 1254
MluCI AATT 9 cut(s) 23, 229, 253, 733, 770, 938, 1101, 1163, 1186
MlyI GAGTC 2 cut(s) 1204, 1256
Mph1103I ATGCAT 1 cut(s) 477
MroXI GAANNNNTTC 1 cut(s) 614
MslI CAYNNNNRTG 1 cut(s) 324
MspA1I CMGCKG 1 cut(s) 216
MspCI CTTAAG 3 cut(s) 122, 464, 683
MspI CCGG 2 cut(s) 809, 852
MspR9I CCNGG 2 cut(s) 132, 678
MvaI CCWGG 2 cut(s) 132, 678
MvnI CGCG 3 cut(s) 9, 216, 309
NcoI CCATGG 1 cut(s) 350
NdeI CATATG 1 cut(s) 873
NdeII GATC 9 cut(s) 15, 288, 304, 468, 544, 876, 1254, 1286, 1308
NlaIII CATG 9 cut(s) 58, 155, 354, 475, 569, 694, 1237, 1264, 1304
NlaIV GGNNCC 2 cut(s) 129, 807
NmeAIII GCCGAG 1 cut(s) 771
NsiI ATGCAT 1 cut(s) 477
NspI RCATGY 1 cut(s) 1264
PagI TCATGA 1 cut(s) 565
PcsI WCGNNNNNNNCGW 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 614
PfeI GAWTC 3 cut(s) 74, 562, 1226
PinAI ACCGGT 1 cut(s) 851
PkrI GCNGC 1 cut(s) 1266
PleI GAGTC 2 cut(s) 1204, 1255
PpsI GAGTC 2 cut(s) 1204, 1255
PsiI TTATAA 1 cut(s) 1315
Psp6I CCWGG 2 cut(s) 130, 676
PspGI CCWGG 2 cut(s) 130, 676
PspN4I GGNNCC 2 cut(s) 129, 807
PspPI GGNCC 1 cut(s) 354
PsuI RGATCY 2 cut(s) 544, 1254
RsaI GTAC 5 cut(s) 59, 129, 150, 689, 1118
RsaNI GTAC 5 cut(s) 58, 128, 149, 688, 1117
RseI CAYNNNNRTG 1 cut(s) 324
SacII CCGCGG 1 cut(s) 217
SatI GCNGC 1 cut(s) 1265
Sau3AI GATC 9 cut(s) 15, 288, 304, 468, 544, 876, 1254, 1286, 1308
Sau96I GGNCC 1 cut(s) 354
SchI GAGTC 2 cut(s) 1204, 1256
ScrFI CCNGG 2 cut(s) 132, 678
SexAI ACCWGGT 1 cut(s) 130
SfaNI GCATC 3 cut(s) 328, 484, 661
SfcI CTRYAG 1 cut(s) 294
Sfr303I CCGCGG 1 cut(s) 217
SgrBI CCGCGG 1 cut(s) 217
SinI GGWCC 1 cut(s) 354
SmiMI CAYNNNNRTG 1 cut(s) 324
SmlI CTYRAG 7 cut(s) 122, 203, 464, 683, 779, 1181, 1199
SmoI CTYRAG 7 cut(s) 122, 203, 464, 683, 779, 1181, 1199
Sse9I AATT 9 cut(s) 23, 229, 253, 733, 770, 938, 1101, 1163, 1186
SsiI CCGC 5 cut(s) 214, 216, 309, 509, 999
SspMI CTAG 3 cut(s) 99, 323, 1007
StyD4I CCNGG 2 cut(s) 130, 676
StyI CCWWGG 2 cut(s) 350, 744
TaaI ACNGT 1 cut(s) 298
TaiI ACGT 4 cut(s) 144, 150, 398, 1122
TaqI TCGA 5 cut(s) 69, 663, 860, 1074, 1106
TaqII GACCGA 1 cut(s) 649
TasI AATT 9 cut(s) 23, 229, 253, 733, 770, 938, 1101, 1163, 1186
TatI WGTACW 1 cut(s) 687
TfiI GAWTC 3 cut(s) 74, 562, 1226
TscAI CASTG 1 cut(s) 343
TseI GCWGC 1 cut(s) 1264
TspDTI ATGAA 2 cut(s) 261, 1210
TspGWI ACGGA 1 cut(s) 608
TspRI CASTG 1 cut(s) 343
Vha464I CTTAAG 3 cut(s) 122, 464, 683
VpaK11BI GGWCC 1 cut(s) 354
XapI RAATTY 5 cut(s) 229, 733, 770, 938, 1186
XbaI TCTAGA 1 cut(s) 322
XceI RCATGY 1 cut(s) 1264
XmnI GAANNNNTTC 1 cut(s) 614
XspI CTAG 3 cut(s) 99, 323, 1007
Zsp2I ATGCAT 1 cut(s) 477
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.