MD03G1252900.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0000062
Physical Location & Seq
Reverse (-)
33999398 .. 34000953
1556 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1252900.v1.1.491

Sequence Viewer

Length: 1263 bp
ATGGGTTCGATGCCAAAGAATCAAGAGCGAGTGAGTGATAGGATAAGCGCATTACCAAGTGAAGTTCTCTGTCATATACTTTCGTTTCTTCCAACTAATTATGCGGTGAGGACCACCGTGTTGTCTAAGAGATGGAAGAACATATGGACTTCAGTTCCCAATCTATACTTTTGTGACGATGATTACCCTGAGGTTAATGATTTTACGGCATTTGTGAATCAAGTACTTGACTCTCATGACTTATCACGGATCCAAAAGTTCCATCTTCATTGTGACGACGACTACTTCGAACACCCGCCTGTTGATCGTTGGATTCACGCTGCAATAGAACGGAAGGTTGTTGAACTTGATCTTTGTGTTTTGTCTTACTTCCCTGTACTGGAAGACTTGGTTATAGATGGATTTCTGGATGACTATGATGTTGAAAGTCTAGATATTAACATCTCCGCACCAGCACTGAAGACGTTAGTATTAAGTATAGAAACTGAAAATTTTGATGAGGATTTCAAGCTTTGTACTAATTCTCCCAAACTTGAGTCCCTTGACGTCAGGCTATATGGCTTGTCAAACTTCTCTTTATCGATCAATGAAAATTCCGTAGTGAAAGCAAACATTGATCTCCCATACGAAGAACAGCCTAGTGGGGAGTCTGCAGATGTGGAAGATATTCACCAATATGCAGAACAACATGATCGTGCAATTGCGATTTTTAAAGATATCTGCAATGTCAAATACCTGTCTCTTTCAGCACATAATTTGGAGGGTGATTTGCCTGCTTTTGACAATTTGAACCAATTGAAGCTGGTTCTTTTTGACTGTGATTACTGGCGATTCCTAACAAAGTTACTCCAAAGATCACCTAATCTAGAACATCTCGTCTTTGAACACAAAGTACAACGCAGTTACAGCTATAGTACTCCTATTCCAGCAGGCAGCCTGATTTCTGGCGCGTTCGTTGATTGTTATAAAGAGTTTGTGAAATGTTCAGAATGCAATGAAGAAGACTTTGAGCATGAATTTTATCCACCAGAGATTGTGCCTATTTCTCTGTCGTCGCACCTCAAGACTATCACTGTGAACAGATACAAGGGAACGCGGTATGAGGTGCAATTGGTAAAGTATTTGTTAAAGAACGGCGAAGTGCTGAATAAGATGACCATTTCTACAGAGGTGACTTCGGATGAACAGAAGAAGGCGTTGTTCGAGGAATTTTTTCTGTTTCAAAGGGGCTCGAAGACGTGTGAAGTTGATATGCAATTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

421

Amino Acids

48.52

Weight (kDa)

4.74

Isoelectric Point (pI)

44.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 54 9.3e-10 F-box domain
FBD PF08387 344 - 387 1.7e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 966
AatII GACGTC 1 cut(s) 549
AccII CGCG 2 cut(s) 950, 1096
AciI CCGC 4 cut(s) 104, 296, 447, 1096
AclWI GGATC 2 cut(s) 244, 257
AcsI RAATTY 4 cut(s) 490, 592, 1016, 1208
AcuI CTGAAG 2 cut(s) 135, 479
AcyI GRCGYC 1 cut(s) 546
AfaI GTAC 5 cut(s) 225, 378, 517, 894, 916
AfiI CCNNNNNNNGG 1 cut(s) 379
AflIII ACRYGT 1 cut(s) 1238
AgsI TTSAA 7 cut(s) 344, 425, 508, 790, 799, 884, 1223
AjiI CACGTC 1 cut(s) 1239
AluBI AGCT 3 cut(s) 511, 802, 909
AluI AGCT 3 cut(s) 511, 802, 909
Alw26I GTCTC 1 cut(s) 744
AlwI GGATC 2 cut(s) 244, 257
ApeKI GCWGC 2 cut(s) 320, 933
ApoI RAATTY 4 cut(s) 490, 592, 1016, 1208
ArsI GACNNNNNNTTYG 2 cut(s) 269, 301
Asp700I GAANNNNTTC 2 cut(s) 666, 1212
AspLEI GCGC 2 cut(s) 50, 950
AspS9I GGNCC 1 cut(s) 111
AsuHPI GGTGA 5 cut(s) 118, 662, 776, 849, 1183
AsuII TTCGAA 1 cut(s) 288
AvaII GGWCC 1 cut(s) 111
AxyI CCTNAGG 1 cut(s) 189
BamHI GGATCC 1 cut(s) 249
BanII GRGCYC 1 cut(s) 1232
BbsI GAAGAC 4 cut(s) 390, 467, 1008, 1241
BbvI GCAGC 2 cut(s) 307, 945
BccI CCATC 3 cut(s) 126, 270, 392
BceAI ACGGC 2 cut(s) 222, 1150
BcoDI GTCTC 1 cut(s) 744
BfaI CTAG 3 cut(s) 431, 639, 866
BfmI CTRYAG 3 cut(s) 651, 910, 1164
BisI GCNGC 2 cut(s) 321, 934
BlsI GCNGC 2 cut(s) 322, 935
BmcAI AGTACT 2 cut(s) 225, 916
Bme18I GGWCC 1 cut(s) 111
BmgBI CACGTC 1 cut(s) 1239
BmgT120I GGNCC 1 cut(s) 111
BmiI GGNNCC 1 cut(s) 251
BpiI GAAGAC 4 cut(s) 390, 467, 1008, 1241
Bpu14I TTCGAA 1 cut(s) 288
BpuEI CTTGAG 2 cut(s) 554, 1046
Bsa29I ATCGAT 1 cut(s) 581
BsaHI GRCGYC 1 cut(s) 546
BsaXI ACNNNNNCTCC 2 cut(s) 508, 538
Bsc4I CCNNNNNNNGG 1 cut(s) 379
Bse1I ACTGG 2 cut(s) 384, 830
Bse21I CCTNAGG 1 cut(s) 189
Bse3DI GCAATG 2 cut(s) 730, 1000
BseCI ATCGAT 1 cut(s) 581
BseGI GGATG 2 cut(s) 415, 1186
BseLI CCNNNNNNNGG 1 cut(s) 379
BseMI GCAATG 2 cut(s) 730, 1000
BseMII CTCAG 1 cut(s) 180
BseNI ACTGG 2 cut(s) 384, 830
BseXI GCAGC 2 cut(s) 307, 945
Bsh1236I CGCG 2 cut(s) 950, 1096
BshVI ATCGAT 1 cut(s) 581
BslFI GGGAC 1 cut(s) 523
BslI CCNNNNNNNGG 1 cut(s) 379
BsmAI GTCTC 1 cut(s) 744
BsmFI GGGAC 1 cut(s) 523
BsmI GAATGC 1 cut(s) 995
Bsp119I TTCGAA 1 cut(s) 288
Bsp1286I GDGCHC 1 cut(s) 1232
Bsp143I GATC 7 cut(s) 249, 304, 349, 582, 616, 691, 854
BspACI CCGC 4 cut(s) 104, 296, 447, 1096
BspCNI CTCAG 1 cut(s) 181
BspDI ATCGAT 1 cut(s) 581
BspFNI CGCG 2 cut(s) 950, 1096
BspHI TCATGA 1 cut(s) 235
BspLI GGNNCC 1 cut(s) 251
BspMAI CTGCAG 1 cut(s) 655
BspPI GGATC 2 cut(s) 244, 257
BspT104I TTCGAA 1 cut(s) 288
BsrDI GCAATG 2 cut(s) 730, 1000
BsrI ACTGG 2 cut(s) 384, 830
BssMI GATC 7 cut(s) 249, 304, 349, 582, 616, 691, 854
BssNI GRCGYC 1 cut(s) 546
Bst4CI ACNGT 3 cut(s) 118, 818, 1075
BstACI GRCGYC 1 cut(s) 546
BstBI TTCGAA 1 cut(s) 288
BstC8I GCNNGC 2 cut(s) 774, 931
BstDEI CTNAG 2 cut(s) 126, 189
BstF5I GGATG 2 cut(s) 415, 1186
BstFNI CGCG 2 cut(s) 950, 1096
BstHHI GCGC 2 cut(s) 50, 950
BstKTI GATC 7 cut(s) 252, 307, 352, 585, 619, 694, 857
BstMAI GTCTC 1 cut(s) 744
BstMBI GATC 7 cut(s) 249, 304, 349, 582, 616, 691, 854
BstMWI GCNNNNNNNGC 1 cut(s) 906
BstSFI CTRYAG 3 cut(s) 651, 910, 1164
BstUI CGCG 2 cut(s) 950, 1096
BstV1I GCAGC 2 cut(s) 307, 945
BstV2I GAAGAC 4 cut(s) 390, 467, 1008, 1241
BstX2I RGATCY 1 cut(s) 249
BstYI RGATCY 1 cut(s) 249
Bsu15I ATCGAT 1 cut(s) 581
Bsu36I CCTNAGG 1 cut(s) 189
BsuTUI ATCGAT 1 cut(s) 581
BtrI CACGTC 1 cut(s) 1239
BtsCI GGATG 2 cut(s) 415, 1186
BtsIMutI CAGTG 2 cut(s) 455, 1071
Cac8I GCNNGC 2 cut(s) 774, 931
CciI TCATGA 1 cut(s) 235
CfoI GCGC 2 cut(s) 50, 950
Cfr13I GGNCC 1 cut(s) 111
ClaI ATCGAT 1 cut(s) 581
Csp6I GTAC 5 cut(s) 224, 377, 516, 893, 915
CviAII CATG 3 cut(s) 236, 689, 1013
CviJI RGCY 8 cut(s) 511, 553, 561, 637, 802, 909, 936, 1230
CviKI_1 RGCY 8 cut(s) 511, 553, 561, 637, 802, 909, 936, 1230
CviQI GTAC 5 cut(s) 224, 377, 516, 893, 915
DdeI CTNAG 2 cut(s) 126, 189
DpnI GATC 7 cut(s) 251, 306, 351, 584, 618, 693, 856
DpnII GATC 7 cut(s) 249, 304, 349, 582, 616, 691, 854
DraI TTTAAA 1 cut(s) 712
Eco24I GRGCYC 1 cut(s) 1232
Eco32I GATATC 1 cut(s) 718
Eco47I GGWCC 1 cut(s) 111
Eco57I CTGAAG 2 cut(s) 135, 479
Eco81I CCTNAGG 1 cut(s) 189
EcoRV GATATC 1 cut(s) 718
EcoT38I GRGCYC 1 cut(s) 1232
FaeI CATG 3 cut(s) 239, 692, 1016
FaqI GGGAC 1 cut(s) 523
FatI CATG 3 cut(s) 235, 688, 1012
FauI CCCGC 1 cut(s) 303
FauNDI CATATG 1 cut(s) 143
Fnu4HI GCNGC 2 cut(s) 321, 934
FokI GGATG 2 cut(s) 422, 1193
FriOI GRGCYC 1 cut(s) 1232
Fsp4HI GCNGC 2 cut(s) 321, 934
FspBI CTAG 3 cut(s) 431, 639, 866
GlaI GCGC 2 cut(s) 49, 949
GluI GCNGC 2 cut(s) 321, 934
HhaI GCGC 2 cut(s) 50, 950
Hin1I GRCGYC 1 cut(s) 546
Hin1II CATG 3 cut(s) 239, 692, 1016
Hin6I GCGC 2 cut(s) 48, 948
HinP1I GCGC 2 cut(s) 48, 948
HindIII AAGCTT 1 cut(s) 509
HinfI GANTC 7 cut(s) 19, 217, 230, 313, 536, 647, 831
HphI GGTGA 5 cut(s) 118, 662, 776, 849, 1183
Hpy166II GTNNAC 1 cut(s) 1078
Hpy188I TCNGA 2 cut(s) 988, 1180
Hpy188III TCNNGA 6 cut(s) 23, 236, 407, 431, 866, 1063
Hpy8I GTNNAC 1 cut(s) 1078
Hpy99I CGWCG 2 cut(s) 281, 1057
HpyAV CCTTC 2 cut(s) 328, 1186
HpyCH4III ACNGT 3 cut(s) 118, 818, 1075
HpyCH4IV ACGT 3 cut(s) 464, 546, 1238
HpyCH4V TGCA 8 cut(s) 323, 653, 680, 698, 723, 993, 1108, 1255
HpyF10VI GCNNNNNNNGC 1 cut(s) 906
HpyF3I CTNAG 2 cut(s) 126, 189
HpySE526I ACGT 3 cut(s) 464, 546, 1238
Hsp92I GRCGYC 1 cut(s) 546
Hsp92II CATG 3 cut(s) 239, 692, 1016
HspAI GCGC 2 cut(s) 48, 948
Kzo9I GATC 7 cut(s) 249, 304, 349, 582, 616, 691, 854
Lsp1109I GCAGC 2 cut(s) 307, 945
MaeI CTAG 3 cut(s) 431, 639, 866
MaeII ACGT 3 cut(s) 464, 546, 1238
MaeIII GTNAC 5 cut(s) 173, 272, 843, 902, 1171
MalI GATC 7 cut(s) 251, 306, 351, 584, 618, 693, 856
MboI GATC 7 cut(s) 249, 304, 349, 582, 616, 691, 854
MfeI CAATTG 3 cut(s) 699, 794, 1109
MflI RGATCY 1 cut(s) 249
MhlI GDGCHC 1 cut(s) 1232
MlyI GAGTC 3 cut(s) 224, 545, 656
MmeI TCCRAC 2 cut(s) 116, 290
MnlI CCTC 8 cut(s) 102, 184, 493, 754, 1070, 1096, 1162, 1198
MroXI GAANNNNTTC 2 cut(s) 666, 1212
MseI TTAA 5 cut(s) 195, 438, 473, 711, 1127
MslI CAYNNNNRTG 2 cut(s) 675, 693
MunI CAATTG 3 cut(s) 699, 794, 1109
Mva1269I GAATGC 1 cut(s) 995
MvnI CGCG 2 cut(s) 950, 1096
MwoI GCNNNNNNNGC 1 cut(s) 906
NdeI CATATG 1 cut(s) 143
NdeII GATC 7 cut(s) 249, 304, 349, 582, 616, 691, 854
NlaIII CATG 3 cut(s) 239, 692, 1016
NlaIV GGNNCC 1 cut(s) 251
NmuCI GTSAC 3 cut(s) 173, 272, 1171
NspV TTCGAA 1 cut(s) 288
PagI TCATGA 1 cut(s) 235
PcsI WCGNNNNNNNCGW 1 cut(s) 285
PctI GAATGC 1 cut(s) 995
PdmI GAANNNNTTC 2 cut(s) 666, 1212
PfeI GAWTC 4 cut(s) 19, 217, 313, 831
PkrI GCNGC 2 cut(s) 322, 935
PleI GAGTC 3 cut(s) 224, 544, 655
PpsI GAGTC 3 cut(s) 224, 544, 655
PsiI TTATAA 1 cut(s) 966
PspN4I GGNNCC 1 cut(s) 251
PspPI GGNCC 1 cut(s) 111
PsrI GAACNNNNNNTAC 2 cut(s) 876, 908
PstI CTGCAG 1 cut(s) 655
PsuI RGATCY 1 cut(s) 249
RsaI GTAC 5 cut(s) 225, 378, 517, 894, 916
RsaNI GTAC 5 cut(s) 224, 377, 516, 893, 915
RseI CAYNNNNRTG 2 cut(s) 675, 693
SaqAI TTAA 5 cut(s) 195, 438, 473, 711, 1127
SatI GCNGC 2 cut(s) 321, 934
Sau3AI GATC 7 cut(s) 249, 304, 349, 582, 616, 691, 854
Sau96I GGNCC 1 cut(s) 111
ScaI AGTACT 2 cut(s) 225, 916
SchI GAGTC 3 cut(s) 224, 545, 656
SduI GDGCHC 1 cut(s) 1232
SfcI CTRYAG 3 cut(s) 651, 910, 1164
SfuI TTCGAA 1 cut(s) 288
SinI GGWCC 1 cut(s) 111
SmiMI CAYNNNNRTG 2 cut(s) 675, 693
SmlI CTYRAG 2 cut(s) 533, 1061
SmoI CTYRAG 2 cut(s) 533, 1061
SsiI CCGC 4 cut(s) 104, 296, 447, 1096
SspMI CTAG 3 cut(s) 431, 639, 866
TaaI ACNGT 3 cut(s) 118, 818, 1075
TaiI ACGT 3 cut(s) 467, 549, 1241
TaqI TCGA 5 cut(s) 8, 288, 581, 1203, 1232
TatI WGTACW 5 cut(s) 223, 376, 515, 892, 914
TfiI GAWTC 4 cut(s) 19, 217, 313, 831
Tru1I TTAA 5 cut(s) 195, 438, 473, 711, 1127
Tru9I TTAA 5 cut(s) 195, 438, 473, 711, 1127
TscAI CASTG 2 cut(s) 462, 1078
TseFI GTSAC 3 cut(s) 173, 272, 1171
TseI GCWGC 2 cut(s) 320, 933
Tsp45I GTSAC 3 cut(s) 173, 272, 1171
TspDTI ATGAA 5 cut(s) 257, 603, 1011, 1029, 1197
TspGWI ACGGA 3 cut(s) 262, 346, 586
TspRI CASTG 2 cut(s) 462, 1078
VpaK11BI GGWCC 1 cut(s) 111
XapI RAATTY 4 cut(s) 490, 592, 1016, 1208
XbaI TCTAGA 2 cut(s) 430, 865
XmnI GAANNNNTTC 2 cut(s) 666, 1212
XspI CTAG 3 cut(s) 431, 639, 866
ZraI GACGTC 1 cut(s) 547
ZrmI AGTACT 2 cut(s) 225, 916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.