Rroxscaffold_5G00361120

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000062
Physical Location & Seq
Reverse (-)
41728723 .. 41730183
1461 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00361120.1

Sequence Viewer

Length: 1461 bp
ATGGAATCAAAACGTCCAGAAGGAGCTAAAGATAGGATCAGCCAATTACCGGACGATATTCTTGTTCATATACTATCCTATATTCCGACGGTCTATTCTGTTCGAACCATGGTTTTGTCTAAAAGATGGAACAACTTATGGACCTTCGTCCCCATCCTACACTTCGACCAACTAGATAATCGCATAGGACATTATCGAACTTGGTATACTTTTGATGATTTTGGGAAGTTTGTTGATGGTGCACTCTCGTTACACAACTCGTCGAGAATCAGAAAATTTCGTCTTCATATTGAACGCGACATTCAGCTTATTCGAGAGGAAGGTGTTTCTCGCAGTCGTGACTGGATATGCACTGCCATGAGGCATGAGGTCTGTGAACTTGATCTTTATTTTTGCCCTAATTATCAGTGGAGAGAGAAGATAGAGTTGAATCTGCCTCTAAGAGTTTTCTTGTGCAAAACTCTGGAGGTTTTGAAGGTACATTCAAATTGTATCAACTATCCTCCTACTAAACCAGGTTACTTTCCAAGCCTCAAGTTCGCCAAAGTTACCGCTGAACATGGAGATAATTCCTCAATGGGAGAACTTTTTTGTAACTGCCCTGTACTTGAAGAGTTGTCTATCGATGCCCATCCTATGAAAAAAGATGTCAAAATCTGGATCTCTGCACCTGAATTGAAAACTTTAAGGACTAGAATTCTTGTAAATGATGATGAACGAAAGGTGAAAGGGATTTCTATCAATGCTCCAAAGCTTGAAAACCTTTTTGTCTACACTGATTTGACAAGATATATCTTGCGGAATGCAAAATCCCTCGTCAAAGCCAACATAGAACTCACAGATTTTGAAGAAAATTTGAGTCCAGAGCTTTTGAACCGTGCAACTGCTTTACTTGCAGGAGTTTCCGGTGTTGAATATTTGCATATATCAGGTCCTAATTATGTGGCATGTTCACTGCCTAATTTCTGTAATTTGAAGCAATTGAAGCTCATTCTTTTTGGGTGCTCTTATTTGGAATATGTAATGGAGTTGCTCAAGCGATCACCTAAGCTTGAAGATCTTGTCTTAGATATTGATGTCCGCTCATGGTGTCGTGAAGAATATGTCGAAGGATACGAGCCCTTCAAGCCACCAGAGATTGTGCCTATTTGTGTGGTGTCCCACCTTAAGACTGTTTCCATTACTCACATCACGGGACATGATGATCAGTTAGGTGTGGTAAAGTATTTGTTAAAGTATGGTCAAGTTCTGAGGAATATGACTATATTCACCTGTGGTGCTCTTCTTTTTAAGACTAGTCATATCACAGAAGAGAAGTTCCAGAGGAAAATTTTGAAGTATCACAAGAGTTCAAACACTTGTGAGGTTGAAGTTAAGTTTGAAAATAAGGGGGTAGTTTCAAAATGTTGTTTTCCCTGTGGAAGCATCAACCTCCACCTAGATCAAAGATATCGAAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

486

Amino Acids

56.43

Weight (kDa)

8.52

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 13 - 52 4.9e-09 F-box domain
LRR_At5g56370 PF24758 114 - 262 7e-09 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 378 - 422 8.6e-10 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1083
AccI GTMKAC 2 cut(s) 206, 771
AccII CGCG 1 cut(s) 297
AciI CCGC 3 cut(s) 552, 799, 1081
AclWI GGATC 2 cut(s) 44, 668
AcsI RAATTY 4 cut(s) 275, 696, 853, 1329
AfaI GTAC 2 cut(s) 480, 606
AfiI CCNNNNNNNGG 1 cut(s) 49
AflII CTTAAG 1 cut(s) 1166
AhlI ACTAGT 1 cut(s) 1295
AjnI CCWGG 1 cut(s) 514
AluBI AGCT 6 cut(s) 26, 307, 754, 868, 988, 1051
AluI AGCT 6 cut(s) 26, 307, 754, 868, 988, 1051
Alw21I GWGCWC 3 cut(s) 244, 1007, 1282
Alw44I GTGCAC 1 cut(s) 240
AlwI GGATC 2 cut(s) 44, 668
ApaLI GTGCAC 1 cut(s) 240
ApoI RAATTY 4 cut(s) 275, 696, 853, 1329
AspS9I GGNCC 2 cut(s) 141, 932
AsuHPI GGTGA 3 cut(s) 736, 1035, 1261
AsuII TTCGAA 1 cut(s) 103
AvaII GGWCC 2 cut(s) 141, 932
BaeGI GKGCMC 1 cut(s) 244
BanII GRGCYC 1 cut(s) 1122
BbsI GAAGAC 1 cut(s) 275
Bbv12I GWGCWC 3 cut(s) 244, 1007, 1282
BccI CCATC 4 cut(s) 120, 161, 230, 639
BciT130I CCWGG 1 cut(s) 516
BciVI GTATCC 1 cut(s) 1106
BclI TGATCA 1 cut(s) 1204
BcuI ACTAGT 1 cut(s) 1295
BfaI CTAG 4 cut(s) 173, 693, 1296, 1439
BfrI CTTAAG 1 cut(s) 1166
BfuI GTATCC 1 cut(s) 1106
BglII AGATCT 1 cut(s) 1057
Bme1390I CCNGG 1 cut(s) 516
Bme18I GGWCC 2 cut(s) 141, 932
BmgT120I GGNCC 2 cut(s) 141, 932
BmrFI CCNGG 1 cut(s) 516
BmsI GCATC 2 cut(s) 616, 1434
BoxI GACNNNNGTC 1 cut(s) 146
BpiI GAAGAC 1 cut(s) 275
BpmI CTGGAG 1 cut(s) 485
Bpu10I CCTNAGC 1 cut(s) 1047
Bpu14I TTCGAA 1 cut(s) 103
BpuEI CTTGAG 2 cut(s) 518, 1019
Bsa29I ATCGAT 1 cut(s) 624
BsaBI GATNNNNATC 2 cut(s) 630, 737
BsaJI CCNNGG 1 cut(s) 108
BsaWI WCCGGW 2 cut(s) 49, 905
Bsc4I CCNNNNNNNGG 1 cut(s) 49
Bse1I ACTGG 1 cut(s) 347
Bse8I GATNNNNATC 2 cut(s) 630, 737
BseBI CCWGG 1 cut(s) 516
BseCI ATCGAT 1 cut(s) 624
BseDI CCNNGG 1 cut(s) 108
BseGI GGATG 2 cut(s) 153, 631
BseJI GATNNNNATC 2 cut(s) 630, 737
BseLI CCNNNNNNNGG 1 cut(s) 49
BseMII CTCAG 1 cut(s) 1241
BseNI ACTGG 1 cut(s) 347
BseSI GKGCMC 1 cut(s) 244
BsgI GTGCAG 1 cut(s) 651
Bsh1236I CGCG 1 cut(s) 297
BshVI ATCGAT 1 cut(s) 624
BsiHKAI GWGCWC 3 cut(s) 244, 1007, 1282
BsiSI CCGG 2 cut(s) 50, 906
BslFI GGGAC 3 cut(s) 134, 1144, 1209
BslI CCNNNNNNNGG 1 cut(s) 49
BsmFI GGGAC 3 cut(s) 134, 1144, 1209
BsmI GAATGC 1 cut(s) 808
Bsp119I TTCGAA 1 cut(s) 103
Bsp1286I GDGCHC 4 cut(s) 244, 1007, 1122, 1282
Bsp143I GATC 7 cut(s) 36, 382, 660, 1040, 1057, 1204, 1441
Bsp19I CCATGG 1 cut(s) 108
BspACI CCGC 3 cut(s) 552, 799, 1081
BspCNI CTCAG 1 cut(s) 1242
BspDI ATCGAT 1 cut(s) 624
BspFNI CGCG 1 cut(s) 297
BspPI GGATC 2 cut(s) 44, 668
BspQI GCTCTTC 1 cut(s) 1287
BspT104I TTCGAA 1 cut(s) 103
BspTI CTTAAG 1 cut(s) 1166
BsrBI CCGCTC 1 cut(s) 1083
BsrI ACTGG 1 cut(s) 347
BssECI CCNNGG 1 cut(s) 108
BssMI GATC 7 cut(s) 36, 382, 660, 1040, 1057, 1204, 1441
BssNAI GTATAC 1 cut(s) 207
BssT1I CCWWGG 1 cut(s) 108
Bst1107I GTATAC 1 cut(s) 207
Bst2UI CCWGG 1 cut(s) 516
Bst4CI ACNGT 3 cut(s) 91, 878, 1174
Bst6I CTCTTC 3 cut(s) 606, 1287, 1305
BstAFI CTTAAG 1 cut(s) 1166
BstBI TTCGAA 1 cut(s) 103
BstDEI CTNAG 4 cut(s) 440, 1047, 1066, 1250
BstDSI CCRYGG 1 cut(s) 108
BstF5I GGATG 2 cut(s) 153, 631
BstFNI CGCG 1 cut(s) 297
BstKTI GATC 7 cut(s) 39, 385, 663, 1043, 1060, 1207, 1444
BstMBI GATC 7 cut(s) 36, 382, 660, 1040, 1057, 1204, 1441
BstMWI GCNNNNNNNGC 3 cut(s) 893, 985, 1126
BstNI CCWGG 1 cut(s) 516
BstNSI RCATGY 1 cut(s) 951
BstPAI GACNNNNGTC 1 cut(s) 146
BstSCI CCNGG 1 cut(s) 514
BstSLI GKGCMC 1 cut(s) 244
BstUI CGCG 1 cut(s) 297
BstV2I GAAGAC 1 cut(s) 275
BstX2I RGATCY 2 cut(s) 660, 1057
BstYI RGATCY 2 cut(s) 660, 1057
BstZ17I GTATAC 1 cut(s) 207
Bsu15I ATCGAT 1 cut(s) 624
BsuI GTATCC 1 cut(s) 1106
BsuTUI ATCGAT 1 cut(s) 624
BtgI CCRYGG 1 cut(s) 108
BtsCI GGATG 2 cut(s) 153, 631
BtsI GCAGTG 2 cut(s) 351, 953
BtsIMutI CAGTG 4 cut(s) 351, 413, 774, 953
Cfr13I GGNCC 2 cut(s) 141, 932
ClaI ATCGAT 1 cut(s) 624
CsiI ACCWGGT 1 cut(s) 514
Csp6I GTAC 2 cut(s) 479, 605
CviAII CATG 7 cut(s) 109, 358, 365, 560, 948, 1086, 1199
CviQI GTAC 2 cut(s) 479, 605
DdeI CTNAG 4 cut(s) 440, 1047, 1066, 1250
DpnI GATC 7 cut(s) 38, 384, 662, 1042, 1059, 1206, 1443
DpnII GATC 7 cut(s) 36, 382, 660, 1040, 1057, 1204, 1441
Eam1104I CTCTTC 3 cut(s) 606, 1287, 1305
EarI CTCTTC 3 cut(s) 606, 1287, 1305
Eco130I CCWWGG 1 cut(s) 108
Eco24I GRGCYC 1 cut(s) 1122
Eco32I GATATC 1 cut(s) 1451
Eco47I GGWCC 2 cut(s) 141, 932
EcoO109I RGGNCCY 1 cut(s) 932
EcoRI GAATTC 1 cut(s) 696
EcoRII CCWGG 1 cut(s) 514
EcoRV GATATC 1 cut(s) 1451
EcoT14I CCWWGG 1 cut(s) 108
EcoT38I GRGCYC 1 cut(s) 1122
ErhI CCWWGG 1 cut(s) 108
FaeI CATG 7 cut(s) 112, 361, 368, 563, 951, 1089, 1202
FaqI GGGAC 3 cut(s) 134, 1144, 1209
FatI CATG 7 cut(s) 108, 357, 364, 559, 947, 1085, 1198
FbaI TGATCA 1 cut(s) 1204
FblI GTMKAC 2 cut(s) 206, 771
FokI GGATG 2 cut(s) 140, 618
FriOI GRGCYC 1 cut(s) 1122
FspBI CTAG 4 cut(s) 173, 693, 1296, 1439
GsuI CTGGAG 1 cut(s) 485
HapII CCGG 2 cut(s) 50, 906
Hin1II CATG 7 cut(s) 112, 361, 368, 563, 951, 1089, 1202
HindIII AAGCTT 2 cut(s) 752, 1049
HinfI GANTC 4 cut(s) 5, 267, 430, 859
HpaII CCGG 2 cut(s) 50, 906
HphI GGTGA 3 cut(s) 736, 1035, 1261
Hpy166II GTNNAC 5 cut(s) 207, 242, 377, 772, 953
Hpy188I TCNGA 3 cut(s) 87, 272, 1251
Hpy188III TCNNGA 9 cut(s) 17, 264, 314, 338, 464, 658, 863, 1094, 1321
Hpy8I GTNNAC 5 cut(s) 207, 242, 377, 772, 953
Hpy99I CGWCG 2 cut(s) 91, 265
HpyAV CCTTC 6 cut(s) 14, 154, 314, 469, 1103, 1132
HpyCH4III ACNGT 3 cut(s) 91, 878, 1174
HpyCH4IV ACGT 1 cut(s) 13
HpyCH4V TGCA 8 cut(s) 242, 351, 456, 668, 806, 881, 896, 922
HpyF10VI GCNNNNNNNGC 3 cut(s) 893, 985, 1126
HpyF3I CTNAG 4 cut(s) 440, 1047, 1066, 1250
HpySE526I ACGT 1 cut(s) 13
Hsp92II CATG 7 cut(s) 112, 361, 368, 563, 951, 1089, 1202
Ksp22I TGATCA 1 cut(s) 1204
Kzo9I GATC 7 cut(s) 36, 382, 660, 1040, 1057, 1204, 1441
LguI GCTCTTC 1 cut(s) 1287
LmnI GCTCC 2 cut(s) 23, 751
LweI GCATC 2 cut(s) 616, 1434
MabI ACCWGGT 1 cut(s) 514
MaeI CTAG 4 cut(s) 173, 693, 1296, 1439
MaeII ACGT 1 cut(s) 13
MaeIII GTNAC 5 cut(s) 249, 338, 518, 547, 593
MalI GATC 7 cut(s) 38, 384, 662, 1042, 1059, 1206, 1443
MbiI CCGCTC 1 cut(s) 1083
MboI GATC 7 cut(s) 36, 382, 660, 1040, 1057, 1204, 1441
MboII GAAGA 8 cut(s) 275, 430, 623, 860, 1067, 1109, 1274, 1322
MfeI CAATTG 1 cut(s) 980
MflI RGATCY 2 cut(s) 660, 1057
MhlI GDGCHC 4 cut(s) 244, 1007, 1122, 1282
MlyI GAGTC 1 cut(s) 868
MmeI TCCRAC 1 cut(s) 110
MseI TTAA 5 cut(s) 686, 1167, 1232, 1290, 1374
MslI CAYNNNNRTG 1 cut(s) 356
MspA1I CMGCKG 1 cut(s) 554
MspCI CTTAAG 1 cut(s) 1166
MspI CCGG 2 cut(s) 50, 906
MspR9I CCNGG 1 cut(s) 516
MunI CAATTG 1 cut(s) 980
Mva1269I GAATGC 1 cut(s) 808
MvaI CCWGG 1 cut(s) 516
MvnI CGCG 1 cut(s) 297
MwoI GCNNNNNNNGC 3 cut(s) 893, 985, 1126
NcoI CCATGG 1 cut(s) 108
NdeII GATC 7 cut(s) 36, 382, 660, 1040, 1057, 1204, 1441
NlaIII CATG 7 cut(s) 112, 361, 368, 563, 951, 1089, 1202
NmuCI GTSAC 1 cut(s) 338
NspI RCATGY 1 cut(s) 951
NspV TTCGAA 1 cut(s) 103
PciSI GCTCTTC 1 cut(s) 1287
PcsI WCGNNNNNNNCGW 1 cut(s) 1113
PctI GAATGC 1 cut(s) 808
PfeI GAWTC 3 cut(s) 5, 267, 430
PleI GAGTC 1 cut(s) 867
PpsI GAGTC 1 cut(s) 867
PpuMI RGGWCCY 1 cut(s) 932
PshAI GACNNNNGTC 1 cut(s) 146
Psp5II RGGWCCY 1 cut(s) 932
Psp6I CCWGG 1 cut(s) 514
PspGI CCWGG 1 cut(s) 514
PspPI GGNCC 2 cut(s) 141, 932
PspPPI RGGWCCY 1 cut(s) 932
PsrI GAACNNNNNNTAC 2 cut(s) 190, 222
PsuI RGATCY 2 cut(s) 660, 1057
RsaI GTAC 2 cut(s) 480, 606
RsaNI GTAC 2 cut(s) 479, 605
RseI CAYNNNNRTG 1 cut(s) 356
SapI GCTCTTC 1 cut(s) 1287
SaqAI TTAA 5 cut(s) 686, 1167, 1232, 1290, 1374
Sau3AI GATC 7 cut(s) 36, 382, 660, 1040, 1057, 1204, 1441
Sau96I GGNCC 2 cut(s) 141, 932
SchI GAGTC 1 cut(s) 868
ScrFI CCNGG 1 cut(s) 516
SduI GDGCHC 4 cut(s) 244, 1007, 1122, 1282
SexAI ACCWGGT 1 cut(s) 514
SfaNI GCATC 2 cut(s) 616, 1434
SfuI TTCGAA 1 cut(s) 103
SinI GGWCC 2 cut(s) 141, 932
SmiMI CAYNNNNRTG 1 cut(s) 356
SmlI CTYRAG 3 cut(s) 533, 1034, 1166
SmoI CTYRAG 3 cut(s) 533, 1034, 1166
SpeI ACTAGT 1 cut(s) 1295
SsiI CCGC 3 cut(s) 552, 799, 1081
SspI AATATT 1 cut(s) 917
SspMI CTAG 4 cut(s) 173, 693, 1296, 1439
StyD4I CCNGG 1 cut(s) 514
StyI CCWWGG 1 cut(s) 108
TaaI ACNGT 3 cut(s) 91, 878, 1174
TaiI ACGT 1 cut(s) 16
TaqI TCGA 8 cut(s) 103, 165, 196, 263, 313, 624, 1107, 1453
TatI WGTACW 1 cut(s) 604
TfiI GAWTC 3 cut(s) 5, 267, 430
Tru1I TTAA 5 cut(s) 686, 1167, 1232, 1290, 1374
Tru9I TTAA 5 cut(s) 686, 1167, 1232, 1290, 1374
TscAI CASTG 4 cut(s) 358, 413, 781, 960
TseFI GTSAC 1 cut(s) 338
Tsp45I GTSAC 1 cut(s) 338
TspDTI ATGAA 4 cut(s) 56, 275, 653, 729
TspRI CASTG 4 cut(s) 358, 413, 781, 960
Vha464I CTTAAG 1 cut(s) 1166
VneI GTGCAC 1 cut(s) 240
VpaK11BI GGWCC 2 cut(s) 141, 932
XapI RAATTY 4 cut(s) 275, 696, 853, 1329
XceI RCATGY 1 cut(s) 951
XmiI GTMKAC 2 cut(s) 206, 771
XspI CTAG 4 cut(s) 173, 693, 1296, 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.