F-box FBD LRR-repeat protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 4 cut(s) | 187, 591, 602, 617 |
| AclI | AACGTT | 1 cut(s) | 285 |
| AclWI | GGATC | 2 cut(s) | 305, 1085 |
| AcsI | RAATTY | 4 cut(s) | 208, 327, 640, 676 |
| AcuI | CTGAAG | 1 cut(s) | 1071 |
| AfaI | GTAC | 2 cut(s) | 177, 534 |
| AjnI | CCWGG | 3 cut(s) | 227, 561, 773 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 285, 317 |
| AluBI | AGCT | 7 cut(s) | 382, 514, 692, 934, 955, 1018, 1129 |
| AluI | AGCT | 7 cut(s) | 382, 514, 692, 934, 955, 1018, 1129 |
| Alw21I | GWGCWC | 1 cut(s) | 949 |
| Alw26I | GTCTC | 2 cut(s) | 470, 980 |
| Alw44I | GTGCAC | 1 cut(s) | 945 |
| AlwI | GGATC | 2 cut(s) | 305, 1085 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 367, 917 |
| Ama87I | CYCGRG | 1 cut(s) | 983 |
| AoxI | GGCC | 2 cut(s) | 338, 559 |
| ApaLI | GTGCAC | 1 cut(s) | 945 |
| ApeKI | GCWGC | 3 cut(s) | 345, 934, 1015 |
| ApoI | RAATTY | 4 cut(s) | 208, 327, 640, 676 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 109, 141 |
| AsuHPI | GGTGA | 3 cut(s) | 123, 798, 1070 |
| AvaI | CYCGRG | 1 cut(s) | 983 |
| BaeGI | GKGCMC | 1 cut(s) | 949 |
| BanII | GRGCYC | 1 cut(s) | 576 |
| Bbv12I | GWGCWC | 1 cut(s) | 949 |
| BbvI | GCAGC | 3 cut(s) | 357, 921, 1027 |
| BccI | CCATC | 3 cut(s) | 56, 132, 933 |
| BciT130I | CCWGG | 3 cut(s) | 229, 563, 775 |
| BcoDI | GTCTC | 2 cut(s) | 470, 980 |
| BfaI | CTAG | 2 cut(s) | 342, 683 |
| BfmI | CTRYAG | 1 cut(s) | 815 |
| BisI | GCNGC | 3 cut(s) | 346, 935, 1016 |
| BlsI | GCNGC | 3 cut(s) | 347, 936, 1017 |
| Bme1390I | CCNGG | 3 cut(s) | 229, 563, 775 |
| BmeT110I | CYCGRG | 1 cut(s) | 983 |
| BmiI | GGNNCC | 2 cut(s) | 31, 1140 |
| BmrFI | CCNGG | 3 cut(s) | 229, 563, 775 |
| BmsI | GCATC | 3 cut(s) | 28, 55, 575 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 977, 1009 |
| BpmI | CTGGAG | 1 cut(s) | 211 |
| BpuEI | CTTGAG | 1 cut(s) | 1069 |
| BsaAI | YACGTR | 1 cut(s) | 866 |
| BsaJI | CCNNGG | 3 cut(s) | 228, 773, 774 |
| BsaWI | WCCGGW | 1 cut(s) | 61 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 21, 51, 285, 315, 391, 421 |
| BseBI | CCWGG | 3 cut(s) | 229, 563, 775 |
| BseDI | CCNNGG | 3 cut(s) | 228, 773, 774 |
| BseGI | GGATG | 1 cut(s) | 70 |
| BseMII | CTCAG | 2 cut(s) | 561, 924 |
| BseRI | GAGGAG | 1 cut(s) | 677 |
| BseSI | GKGCMC | 1 cut(s) | 949 |
| BseXI | GCAGC | 3 cut(s) | 357, 921, 1027 |
| BshFI | GGCC | 2 cut(s) | 340, 561 |
| BsiHKAI | GWGCWC | 1 cut(s) | 949 |
| BsiHKCI | CYCGRG | 1 cut(s) | 983 |
| BsiSI | CCGG | 1 cut(s) | 62 |
| BsmAI | GTCTC | 2 cut(s) | 470, 980 |
| BsmI | GAATGC | 1 cut(s) | 929 |
| BsnI | GGCC | 2 cut(s) | 340, 561 |
| BsoBI | CYCGRG | 1 cut(s) | 983 |
| Bsp1286I | GDGCHC | 2 cut(s) | 576, 949 |
| Bsp143I | GATC | 5 cut(s) | 298, 310, 700, 803, 1090 |
| BspACI | CCGC | 4 cut(s) | 187, 591, 602, 617 |
| BspANI | GGCC | 2 cut(s) | 340, 561 |
| BspCNI | CTCAG | 2 cut(s) | 562, 923 |
| BspLI | GGNNCC | 2 cut(s) | 31, 1140 |
| BspMAI | CTGCAG | 1 cut(s) | 819 |
| BspPI | GGATC | 2 cut(s) | 305, 1085 |
| BssECI | CCNNGG | 3 cut(s) | 228, 773, 774 |
| BssMI | GATC | 5 cut(s) | 298, 310, 700, 803, 1090 |
| Bst2UI | CCWGG | 3 cut(s) | 229, 563, 775 |
| Bst4CI | ACNGT | 3 cut(s) | 373, 478, 608 |
| Bst6I | CTCTTC | 1 cut(s) | 534 |
| BstBAI | YACGTR | 1 cut(s) | 866 |
| BstC8I | GCNNGC | 4 cut(s) | 617, 723, 945, 1113 |
| BstDEI | CTNAG | 4 cut(s) | 570, 797, 829, 910 |
| BstF5I | GGATG | 1 cut(s) | 70 |
| BstKTI | GATC | 5 cut(s) | 301, 313, 703, 806, 1093 |
| BstMAI | GTCTC | 2 cut(s) | 470, 980 |
| BstMBI | GATC | 5 cut(s) | 298, 310, 700, 803, 1090 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 940 |
| BstNI | CCWGG | 3 cut(s) | 229, 563, 775 |
| BstSCI | CCNGG | 3 cut(s) | 227, 561, 773 |
| BstSFI | CTRYAG | 1 cut(s) | 815 |
| BstSLI | GKGCMC | 1 cut(s) | 949 |
| BstV1I | GCAGC | 3 cut(s) | 357, 921, 1027 |
| BstX2I | RGATCY | 1 cut(s) | 1090 |
| BstYI | RGATCY | 1 cut(s) | 1090 |
| BsuRI | GGCC | 2 cut(s) | 340, 561 |
| BtgZI | GCGATG | 1 cut(s) | 952 |
| BtsCI | GGATG | 1 cut(s) | 70 |
| BtsI | GCAGTG | 1 cut(s) | 220 |
| BtsIMutI | CAGTG | 3 cut(s) | 58, 220, 365 |
| Cac8I | GCNNGC | 4 cut(s) | 617, 723, 945, 1113 |
| CaiI | CAGNNNCTG | 2 cut(s) | 367, 917 |
| Csp6I | GTAC | 2 cut(s) | 176, 533 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1014, 1049 |
| CviQI | GTAC | 2 cut(s) | 176, 533 |
| DdeI | CTNAG | 4 cut(s) | 570, 797, 829, 910 |
| DpnI | GATC | 5 cut(s) | 300, 312, 702, 805, 1092 |
| DpnII | GATC | 5 cut(s) | 298, 310, 700, 803, 1090 |
| Eam1104I | CTCTTC | 1 cut(s) | 534 |
| EarI | CTCTTC | 1 cut(s) | 534 |
| Eco147I | AGGCCT | 1 cut(s) | 561 |
| Eco24I | GRGCYC | 1 cut(s) | 576 |
| Eco57I | CTGAAG | 1 cut(s) | 1071 |
| Eco88I | CYCGRG | 1 cut(s) | 983 |
| EcoRII | CCWGG | 3 cut(s) | 227, 561, 773 |
| EcoT38I | GRGCYC | 1 cut(s) | 576 |
| FaiI | YATR | 6 cut(s) | 83, 255, 431, 551, 708, 837 |
| FauI | CCCGC | 3 cut(s) | 598, 609, 624 |
| Fnu4HI | GCNGC | 3 cut(s) | 346, 935, 1016 |
| FokI | GGATG | 1 cut(s) | 77 |
| FriOI | GRGCYC | 1 cut(s) | 576 |
| Fsp4HI | GCNGC | 3 cut(s) | 346, 935, 1016 |
| FspBI | CTAG | 2 cut(s) | 342, 683 |
| GluI | GCNGC | 3 cut(s) | 346, 935, 1016 |
| GsuI | CTGGAG | 1 cut(s) | 211 |
| HaeIII | GGCC | 2 cut(s) | 340, 561 |
| HapII | CCGG | 1 cut(s) | 62 |
| HinfI | GANTC | 6 cut(s) | 5, 262, 890, 908, 974, 1005 |
| HpaII | CCGG | 1 cut(s) | 62 |
| HphI | GGTGA | 3 cut(s) | 123, 798, 1070 |
| Hpy166II | GTNNAC | 5 cut(s) | 176, 519, 546, 587, 947 |
| Hpy188I | TCNGA | 6 cut(s) | 199, 459, 571, 913, 1090, 1178 |
| Hpy188III | TCNNGA | 3 cut(s) | 698, 985, 1048 |
| Hpy8I | GTNNAC | 5 cut(s) | 176, 519, 546, 587, 947 |
| HpyAV | CCTTC | 1 cut(s) | 104 |
| HpyCH4III | ACNGT | 3 cut(s) | 373, 478, 608 |
| HpyCH4IV | ACGT | 5 cut(s) | 161, 285, 501, 865, 1079 |
| HpyCH4V | TGCA | 4 cut(s) | 56, 68, 817, 947 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 940 |
| HpyF3I | CTNAG | 4 cut(s) | 570, 797, 829, 910 |
| HpySE526I | ACGT | 5 cut(s) | 161, 285, 501, 865, 1079 |
| Kzo9I | GATC | 5 cut(s) | 298, 310, 700, 803, 1090 |
| LmnI | GCTCC | 3 cut(s) | 29, 230, 902 |
| Lsp1109I | GCAGC | 3 cut(s) | 357, 921, 1027 |
| LweI | GCATC | 3 cut(s) | 28, 55, 575 |
| MaeI | CTAG | 2 cut(s) | 342, 683 |
| MaeII | ACGT | 5 cut(s) | 161, 285, 501, 865, 1079 |
| MaeIII | GTNAC | 8 cut(s) | 129, 281, 387, 472, 577, 792, 866, 1116 |
| MalI | GATC | 5 cut(s) | 300, 312, 702, 805, 1092 |
| MboI | GATC | 5 cut(s) | 298, 310, 700, 803, 1090 |
| MflI | RGATCY | 1 cut(s) | 1090 |
| MhlI | GDGCHC | 2 cut(s) | 576, 949 |
| MluCI | AATT | 8 cut(s) | 208, 327, 640, 650, 676, 733, 743, 779 |
| MlyI | GAGTC | 1 cut(s) | 902 |
| MmeI | TCCRAC | 1 cut(s) | 239 |
| MnlI | CCTC | 9 cut(s) | 108, 424, 426, 655, 741, 819, 992, 994, 1044 |
| MseI | TTAA | 4 cut(s) | 39, 638, 879, 1133 |
| MslI | CAYNNNNRTG | 1 cut(s) | 136 |
| MspA1I | CMGCKG | 1 cut(s) | 1018 |
| MspI | CCGG | 1 cut(s) | 62 |
| MspR9I | CCNGG | 3 cut(s) | 229, 563, 775 |
| Mva1269I | GAATGC | 1 cut(s) | 929 |
| MvaI | CCWGG | 3 cut(s) | 229, 563, 775 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 940 |
| NdeII | GATC | 5 cut(s) | 298, 310, 700, 803, 1090 |
| NlaIV | GGNNCC | 2 cut(s) | 31, 1140 |
| NmeAIII | GCCGAG | 1 cut(s) | 987 |
| NmuCI | GTSAC | 4 cut(s) | 129, 387, 577, 866 |
| PaeR7I | CTCGAG | 1 cut(s) | 983 |
| PasI | CCCWGGG | 1 cut(s) | 774 |
| PceI | AGGCCT | 1 cut(s) | 561 |
| PctI | GAATGC | 1 cut(s) | 929 |
| PfeI | GAWTC | 5 cut(s) | 5, 262, 890, 974, 1005 |
| PkrI | GCNGC | 3 cut(s) | 347, 936, 1017 |
| PleI | GAGTC | 1 cut(s) | 902 |
| PpsI | GAGTC | 1 cut(s) | 902 |
| Ppu21I | YACGTR | 1 cut(s) | 866 |
| Psp1406I | AACGTT | 1 cut(s) | 285 |
| Psp6I | CCWGG | 3 cut(s) | 227, 561, 773 |
| PspGI | CCWGG | 3 cut(s) | 227, 561, 773 |
| PspN4I | GGNNCC | 2 cut(s) | 31, 1140 |
| PstI | CTGCAG | 1 cut(s) | 819 |
| PstNI | CAGNNNCTG | 2 cut(s) | 367, 917 |
| PsuI | RGATCY | 1 cut(s) | 1090 |
| PvuII | CAGCTG | 1 cut(s) | 1018 |
| RsaI | GTAC | 2 cut(s) | 177, 534 |
| RsaNI | GTAC | 2 cut(s) | 176, 533 |
| RseI | CAYNNNNRTG | 1 cut(s) | 136 |
| SaqAI | TTAA | 4 cut(s) | 39, 638, 879, 1133 |
| SatI | GCNGC | 3 cut(s) | 346, 935, 1016 |
| Sau3AI | GATC | 5 cut(s) | 298, 310, 700, 803, 1090 |
| SchI | GAGTC | 1 cut(s) | 902 |
| ScrFI | CCNGG | 3 cut(s) | 229, 563, 775 |
| SduI | GDGCHC | 2 cut(s) | 576, 949 |
| SfaNI | GCATC | 3 cut(s) | 28, 55, 575 |
| SfcI | CTRYAG | 1 cut(s) | 815 |
| Sfr274I | CTCGAG | 1 cut(s) | 983 |
| SlaI | CTCGAG | 1 cut(s) | 983 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 136 |
| SmlI | CTYRAG | 2 cut(s) | 983, 1048 |
| SmoI | CTYRAG | 2 cut(s) | 983, 1048 |
| Sse9I | AATT | 8 cut(s) | 208, 327, 640, 650, 676, 733, 743, 779 |
| SseBI | AGGCCT | 1 cut(s) | 561 |
| SsiI | CCGC | 4 cut(s) | 187, 591, 602, 617 |
| SspI | AATATT | 1 cut(s) | 1043 |
| SspMI | CTAG | 2 cut(s) | 342, 683 |
| StuI | AGGCCT | 1 cut(s) | 561 |
| StyD4I | CCNGG | 3 cut(s) | 227, 561, 773 |
| TaaI | ACNGT | 3 cut(s) | 373, 478, 608 |
| TaiI | ACGT | 5 cut(s) | 164, 288, 504, 868, 1082 |
| TaqI | TCGA | 1 cut(s) | 984 |
| TasI | AATT | 8 cut(s) | 208, 327, 640, 650, 676, 733, 743, 779 |
| TatI | WGTACW | 2 cut(s) | 175, 532 |
| TfiI | GAWTC | 5 cut(s) | 5, 262, 890, 974, 1005 |
| Tru1I | TTAA | 4 cut(s) | 39, 638, 879, 1133 |
| Tru9I | TTAA | 4 cut(s) | 39, 638, 879, 1133 |
| TscAI | CASTG | 3 cut(s) | 58, 227, 372 |
| TseFI | GTSAC | 4 cut(s) | 129, 387, 577, 866 |
| TseI | GCWGC | 3 cut(s) | 345, 934, 1015 |
| Tsp45I | GTSAC | 4 cut(s) | 129, 387, 577, 866 |
| TspDTI | ATGAA | 2 cut(s) | 897, 936 |
| TspGWI | ACGGA | 1 cut(s) | 293 |
| TspRI | CASTG | 3 cut(s) | 58, 227, 372 |
| VneI | GTGCAC | 1 cut(s) | 945 |
| XapI | RAATTY | 4 cut(s) | 208, 327, 640, 676 |
| XhoI | CTCGAG | 1 cut(s) | 983 |
| XspI | CTAG | 2 cut(s) | 342, 683 |