MD11G1256200.v1.1

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000062
Physical Location & Seq
Forward (+)
36892966 .. 36895847
2882 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1256200.v1.1.491

Sequence Viewer

Length: 1368 bp
ATGGTTACAGATAGGATTAGTGAATTGCCAAAGGAACTTCTTCATGACATACTCTCCCTTCTTCCAGCAAAATACGTTGTGAGGACCAGCGTTTTGTCTACAAAATGGGAGAACATATGGGCTTCTGTCCCCAATCTAGACTGCGAATTCGAAACTTTACCTATAGTATGGAGAGAATCTGTGTCCCTCCCTGATGGTATCACATGGGAAGACGAACATGTGTCTGACCATGTCGATTTTATGACATTTGTTGATCGTGTACTTTACTTTCGCTGCGATTCAGTTATTAAAAAATTCCGTCTTCATTGCTACTGTCGTGTTGAGGATGCCCCTCGTATTGATGGTTGGATTCGCGCTGCCATTAGGCGTAATGTCGTTGAGCTTGATCTTTGTGTTCAAGCACATCGTGATGATTATCAAGAGGACCCGCCTTTGGAGTTTCCTCGACGTGTATTCATGTGCAAAACACTGGAGGTTTTGAAGGTGAAGTCAGATTTTATTACCTATGCTCCTCCTACATCAGGCTGTTTCCCAAGCCTCAAGGTCCTTGATATCAGAGTTGATAATCCTGAAGCCGACTCAATGGAAAAGTTTTTTTCGTGCTGCCCTGTACTTGAAGATTTATCTCTATTTGCATGTGTCACAGATGGTAGGCTTTGGAATTTTAAGGTCTCTGCTCCCAAACTGAAGAGATTAAAAATGACCTTCTTAACTGATCTCTATGATGATAATAATCCAAAGTACTATATTTCTATTAATGCTCCAGAGCTTGAACAGCTTGACATTAAGCAGGACTTTTTGTCAAATTATTCATTTGTGAATCTAAAATCCCCAGTCAAAGGCAGTGTCGATTTCTATTGCCATCTTGGGAAACTCCAGCGTCACTTCTTTGAACGAGCAACTGCGCTTCTGAAGACATTTGCCAACGTTAAATATCTGTCTATTTCAGCTCATTTTGTGGCGGGTTGTCTGCCTGCTTTCAATCATTTGACCGAATTGAAGTTGCTTGTTTTTGATTGCTATCATTGGGATTTGCTAACACAGTTGCTCAAGAAATCAAATAATTTGGAATCTCTTGTCATCGAATATGAAGAAGATGAGGAATGCGTTGAGGATCATGAGGAACTTGAAAGGTACTCAAAAGAGGATCTATGGAGTACACCAGAGTCTGTGCCTATTTGTGTGACTGGACACCTCAAGACTATCACTATAAGGGGACTCGAGGGATACCCGCATGTGAAGAAAGTGGCAAAGTGTTTGTTAAACAGCGGTAAAGTTTTGACTAAGATGACTGTTGACAATGAAGAGTTGTACAAAGAACTAATGCTTGAAGGGGGCTCTAGGACTTGTCTGGTTGAAGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

456

Amino Acids

52.67

Weight (kDa)

5.31

Isoelectric Point (pI)

37.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 45 1.6e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 96 - 439 1.6e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 113 - 268 1.3e-14 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 388 - 431 1.3e-09 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 98
AccII CGCG 1 cut(s) 354
AciI CCGC 4 cut(s) 428, 962, 1232, 1269
AclI AACGTT 1 cut(s) 927
AclWI GGATC 2 cut(s) 1122, 1155
AcsI RAATTY 3 cut(s) 146, 293, 661
AcuI CTGAAG 3 cut(s) 591, 707, 932
AdeI CACNNNGTG 1 cut(s) 407
AfaI GTAC 6 cut(s) 261, 612, 743, 1136, 1159, 1313
AfiI CCNNNNNNNGG 3 cut(s) 433, 521, 839
AflIII ACRYGT 2 cut(s) 217, 448
AhdI GACNNNNNGTC 1 cut(s) 799
AjiI CACGTC 1 cut(s) 449
AluBI AGCT 4 cut(s) 382, 769, 778, 950
AluI AGCT 4 cut(s) 382, 769, 778, 950
Alw26I GTCTC 1 cut(s) 676
AlwI GGATC 2 cut(s) 1122, 1155
AlwNI CAGNNNCTG 1 cut(s) 1169
Ama87I CYCGRG 1 cut(s) 1220
ApeKI GCWGC 3 cut(s) 273, 356, 603
ApoI RAATTY 3 cut(s) 146, 293, 661
ArsI GACNNNNNNTTYG 6 cut(s) 76, 108, 131, 163, 831, 863
AseI ATTAAT 1 cut(s) 756
Asp700I GAANNNNTTC 1 cut(s) 39
AspLEI GCGC 2 cut(s) 356, 907
AspS9I GGNCC 3 cut(s) 84, 424, 544
AsuHPI GGTGA 1 cut(s) 496
AsuII TTCGAA 1 cut(s) 150
AvaI CYCGRG 1 cut(s) 1220
AvaII GGWCC 3 cut(s) 84, 424, 544
BanII GRGCYC 1 cut(s) 1340
BbsI GAAGAC 3 cut(s) 216, 293, 920
BbvI GCAGC 3 cut(s) 260, 343, 590
BccI CCATC 4 cut(s) 188, 335, 641, 870
BciVI GTATCC 1 cut(s) 1220
BcoDI GTCTC 1 cut(s) 676
BfaI CTAG 2 cut(s) 137, 1341
BfmI CTRYAG 1 cut(s) 162
BfuI GTATCC 1 cut(s) 1220
BisI GCNGC 3 cut(s) 274, 357, 604
BlsI GCNGC 3 cut(s) 275, 358, 605
BmcAI AGTACT 1 cut(s) 743
Bme18I GGWCC 3 cut(s) 84, 424, 544
BmeRI GACNNNNNGTC 1 cut(s) 799
BmeT110I CYCGRG 1 cut(s) 1220
BmgBI CACGTC 1 cut(s) 449
BmgT120I GGNCC 3 cut(s) 84, 424, 544
BmiI GGNNCC 1 cut(s) 426
BmrI ACTGGG 1 cut(s) 827
BmsI GCATC 1 cut(s) 316
BmuI ACTGGG 1 cut(s) 827
BpiI GAAGAC 3 cut(s) 216, 293, 920
BpmI CTGGAG 3 cut(s) 491, 747, 860
Bpu14I TTCGAA 1 cut(s) 150
BpuEI CTTGAG 3 cut(s) 524, 1034, 1181
BsaBI GATNNNNATC 3 cut(s) 414, 732, 1020
BsaI GGTCTC 1 cut(s) 676
BsaXI ACNNNNNCTCC 4 cut(s) 38, 68, 493, 523
Bsc4I CCNNNNNNNGG 3 cut(s) 433, 521, 839
Bse1I ACTGG 3 cut(s) 474, 833, 1192
Bse3DI GCAATG 1 cut(s) 304
Bse8I GATNNNNATC 3 cut(s) 414, 732, 1020
BseGI GGATG 1 cut(s) 331
BseJI GATNNNNATC 3 cut(s) 414, 732, 1020
BseLI CCNNNNNNNGG 3 cut(s) 433, 521, 839
BseMI GCAATG 1 cut(s) 304
BseNI ACTGG 3 cut(s) 474, 833, 1192
BseRI GAGGAG 1 cut(s) 501
BseXI GCAGC 3 cut(s) 260, 343, 590
Bsh1236I CGCG 1 cut(s) 354
BsiHKCI CYCGRG 1 cut(s) 1220
BslFI GGGAC 3 cut(s) 113, 169, 1230
BslI CCNNNNNNNGG 3 cut(s) 433, 521, 839
BsmAI GTCTC 1 cut(s) 676
BsmFI GGGAC 3 cut(s) 113, 169, 1230
BsmI GAATGC 1 cut(s) 1109
Bso31I GGTCTC 1 cut(s) 676
BsoBI CYCGRG 1 cut(s) 1220
Bsp119I TTCGAA 1 cut(s) 150
Bsp1286I GDGCHC 1 cut(s) 1340
Bsp1407I TGTACA 1 cut(s) 1311
Bsp143I GATC 5 cut(s) 253, 385, 715, 1114, 1147
BspACI CCGC 4 cut(s) 428, 962, 1232, 1269
BspFNI CGCG 1 cut(s) 354
BspHI TCATGA 2 cut(s) 43, 1117
BspLI GGNNCC 1 cut(s) 426
BspPI GGATC 2 cut(s) 1122, 1155
BspT104I TTCGAA 1 cut(s) 150
BspTNI GGTCTC 1 cut(s) 676
BsrDI GCAATG 1 cut(s) 304
BsrGI TGTACA 1 cut(s) 1311
BsrI ACTGG 3 cut(s) 474, 833, 1192
BssMI GATC 5 cut(s) 253, 385, 715, 1114, 1147
Bst4CI ACNGT 3 cut(s) 314, 1044, 1294
Bst6I CTCTTC 2 cut(s) 683, 1299
BstAUI TGTACA 1 cut(s) 1311
BstBI TTCGAA 1 cut(s) 150
BstC8I GCNNGC 1 cut(s) 975
BstDEI CTNAG 1 cut(s) 1284
BstENI CCTNNNNNAGG 1 cut(s) 519
BstF5I GGATG 1 cut(s) 331
BstFNI CGCG 1 cut(s) 354
BstHHI GCGC 2 cut(s) 356, 907
BstKTI GATC 5 cut(s) 256, 388, 718, 1117, 1150
BstMAI GTCTC 1 cut(s) 676
BstMBI GATC 5 cut(s) 253, 385, 715, 1114, 1147
BstMWI GCNNNNNNNGC 1 cut(s) 775
BstNSI RCATGY 3 cut(s) 221, 639, 1238
BstSFI CTRYAG 1 cut(s) 162
BstUI CGCG 1 cut(s) 354
BstV1I GCAGC 3 cut(s) 260, 343, 590
BstV2I GAAGAC 3 cut(s) 216, 293, 920
BstX2I RGATCY 1 cut(s) 1147
BstYI RGATCY 1 cut(s) 1147
BsuI GTATCC 1 cut(s) 1220
BtrI CACGTC 1 cut(s) 449
BtsCI GGATG 1 cut(s) 331
BtsI GCAGTG 1 cut(s) 850
BtsIMutI CAGTG 2 cut(s) 467, 850
Cac8I GCNNGC 1 cut(s) 975
CaiI CAGNNNCTG 1 cut(s) 1169
CciI TCATGA 2 cut(s) 43, 1117
CfoI GCGC 2 cut(s) 356, 907
Cfr13I GGNCC 3 cut(s) 84, 424, 544
CseI GACGC 1 cut(s) 869
Csp6I GTAC 6 cut(s) 260, 611, 742, 1135, 1158, 1312
CviAII CATG 8 cut(s) 44, 204, 218, 230, 457, 636, 1118, 1235
CviQI GTAC 6 cut(s) 260, 611, 742, 1135, 1158, 1312
DdeI CTNAG 1 cut(s) 1284
DpnI GATC 5 cut(s) 255, 387, 717, 1116, 1149
DpnII GATC 5 cut(s) 253, 385, 715, 1114, 1147
DraIII CACNNNGTG 1 cut(s) 407
DriI GACNNNNNGTC 1 cut(s) 799
Eam1104I CTCTTC 2 cut(s) 683, 1299
Eam1105I GACNNNNNGTC 1 cut(s) 799
EarI CTCTTC 2 cut(s) 683, 1299
Eco24I GRGCYC 1 cut(s) 1340
Eco31I GGTCTC 1 cut(s) 676
Eco32I GATATC 1 cut(s) 553
Eco47I GGWCC 3 cut(s) 84, 424, 544
Eco57I CTGAAG 3 cut(s) 591, 707, 932
Eco88I CYCGRG 1 cut(s) 1220
EcoNI CCTNNNNNAGG 1 cut(s) 519
EcoO109I RGGNCCY 2 cut(s) 424, 544
EcoRI GAATTC 1 cut(s) 146
EcoRV GATATC 1 cut(s) 553
EcoT38I GRGCYC 1 cut(s) 1340
FaeI CATG 8 cut(s) 47, 207, 221, 233, 460, 639, 1121, 1238
FalI AAGNNNNNCTT 2 cut(s) 779, 811
FaqI GGGAC 3 cut(s) 113, 169, 1230
FatI CATG 8 cut(s) 43, 203, 217, 229, 456, 635, 1117, 1234
FauI CCCGC 3 cut(s) 435, 955, 1239
FauNDI CATATG 1 cut(s) 116
FblI GTMKAC 1 cut(s) 98
Fnu4HI GCNGC 3 cut(s) 274, 357, 604
FokI GGATG 1 cut(s) 338
FriOI GRGCYC 1 cut(s) 1340
Fsp4HI GCNGC 3 cut(s) 274, 357, 604
FspBI CTAG 2 cut(s) 137, 1341
GlaI GCGC 2 cut(s) 355, 906
GluI GCNGC 3 cut(s) 274, 357, 604
GsuI CTGGAG 3 cut(s) 491, 747, 860
HgaI GACGC 1 cut(s) 869
HhaI GCGC 2 cut(s) 356, 907
Hin1II CATG 8 cut(s) 47, 207, 221, 233, 460, 639, 1121, 1238
Hin6I GCGC 2 cut(s) 354, 905
HinP1I GCGC 2 cut(s) 354, 905
HincII GTYRAC 1 cut(s) 1297
HindII GTYRAC 1 cut(s) 1297
HinfI GANTC 8 cut(s) 176, 278, 349, 578, 820, 1070, 1166, 1218
HphI GGTGA 1 cut(s) 496
Hpy166II GTNNAC 4 cut(s) 99, 260, 1160, 1297
Hpy188I TCNGA 5 cut(s) 226, 493, 557, 912, 1367
Hpy188III TCNNGA 9 cut(s) 44, 137, 407, 419, 569, 764, 1051, 1118, 1198
Hpy8I GTNNAC 4 cut(s) 99, 260, 1160, 1297
Hpy99I CGWCG 1 cut(s) 450
HpyAV CCTTC 4 cut(s) 68, 475, 715, 1325
HpyCH4III ACNGT 3 cut(s) 314, 1044, 1294
HpyCH4IV ACGT 3 cut(s) 75, 448, 927
HpyCH4V TGCA 2 cut(s) 462, 635
HpyF10VI GCNNNNNNNGC 1 cut(s) 775
HpyF3I CTNAG 1 cut(s) 1284
HpySE526I ACGT 3 cut(s) 75, 448, 927
Hsp92II CATG 8 cut(s) 47, 207, 221, 233, 460, 639, 1121, 1238
HspAI GCGC 2 cut(s) 354, 905
Kzo9I GATC 5 cut(s) 253, 385, 715, 1114, 1147
LmnI GCTCC 3 cut(s) 514, 682, 766
Lsp1109I GCAGC 3 cut(s) 260, 343, 590
LweI GCATC 1 cut(s) 316
MaeI CTAG 2 cut(s) 137, 1341
MaeII ACGT 3 cut(s) 75, 448, 927
MaeIII GTNAC 4 cut(s) 4, 640, 881, 1183
MalI GATC 5 cut(s) 255, 387, 717, 1116, 1149
MboI GATC 5 cut(s) 253, 385, 715, 1114, 1147
MflI RGATCY 1 cut(s) 1147
MhlI GDGCHC 1 cut(s) 1340
MluCI AATT 7 cut(s) 23, 146, 293, 661, 805, 995, 1063
MlyI GAGTC 3 cut(s) 572, 1175, 1212
MmeI TCCRAC 1 cut(s) 326
MroXI GAANNNNTTC 1 cut(s) 39
MseI TTAA 8 cut(s) 288, 666, 695, 710, 756, 786, 930, 1262
MslI CAYNNNNRTG 1 cut(s) 408
MspA1I CMGCKG 1 cut(s) 1269
Mva1269I GAATGC 1 cut(s) 1109
MvnI CGCG 1 cut(s) 354
MwoI GCNNNNNNNGC 1 cut(s) 775
NdeI CATATG 1 cut(s) 116
NdeII GATC 5 cut(s) 253, 385, 715, 1114, 1147
NlaIII CATG 8 cut(s) 47, 207, 221, 233, 460, 639, 1121, 1238
NlaIV GGNNCC 1 cut(s) 426
NmuCI GTSAC 3 cut(s) 640, 881, 1183
NspI RCATGY 3 cut(s) 221, 639, 1238
NspV TTCGAA 1 cut(s) 150
PaeR7I CTCGAG 1 cut(s) 1220
PagI TCATGA 2 cut(s) 43, 1117
PciI ACATGT 1 cut(s) 217
PctI GAATGC 1 cut(s) 1109
PdmI GAANNNNTTC 1 cut(s) 39
PfeI GAWTC 5 cut(s) 176, 278, 349, 820, 1070
PflFI GACNNNGTC 1 cut(s) 230
PkrI GCNGC 3 cut(s) 275, 358, 605
PleI GAGTC 3 cut(s) 572, 1174, 1212
PpsI GAGTC 3 cut(s) 572, 1174, 1212
PpuMI RGGWCCY 2 cut(s) 424, 544
PscI ACATGT 1 cut(s) 217
PshBI ATTAAT 1 cut(s) 756
Psp1406I AACGTT 1 cut(s) 927
Psp5II RGGWCCY 2 cut(s) 424, 544
PspN4I GGNNCC 1 cut(s) 426
PspPI GGNCC 3 cut(s) 84, 424, 544
PspPPI RGGWCCY 2 cut(s) 424, 544
PspXI VCTCGAGB 1 cut(s) 1220
PstNI CAGNNNCTG 1 cut(s) 1169
PsuI RGATCY 1 cut(s) 1147
PsyI GACNNNGTC 1 cut(s) 230
RsaI GTAC 6 cut(s) 261, 612, 743, 1136, 1159, 1313
RsaNI GTAC 6 cut(s) 260, 611, 742, 1135, 1158, 1312
RseI CAYNNNNRTG 1 cut(s) 408
SaqAI TTAA 8 cut(s) 288, 666, 695, 710, 756, 786, 930, 1262
SatI GCNGC 3 cut(s) 274, 357, 604
Sau3AI GATC 5 cut(s) 253, 385, 715, 1114, 1147
Sau96I GGNCC 3 cut(s) 84, 424, 544
ScaI AGTACT 1 cut(s) 743
SchI GAGTC 3 cut(s) 572, 1175, 1212
SduI GDGCHC 1 cut(s) 1340
SfaNI GCATC 1 cut(s) 316
SfcI CTRYAG 1 cut(s) 162
Sfr274I CTCGAG 1 cut(s) 1220
SfuI TTCGAA 1 cut(s) 150
SinI GGWCC 3 cut(s) 84, 424, 544
SlaI CTCGAG 1 cut(s) 1220
SmiMI CAYNNNNRTG 1 cut(s) 408
SmlI CTYRAG 4 cut(s) 539, 1049, 1196, 1220
SmoI CTYRAG 4 cut(s) 539, 1049, 1196, 1220
Sse9I AATT 7 cut(s) 23, 146, 293, 661, 805, 995, 1063
SsiI CCGC 4 cut(s) 428, 962, 1232, 1269
SspMI CTAG 2 cut(s) 137, 1341
TaaI ACNGT 3 cut(s) 314, 1044, 1294
TaiI ACGT 3 cut(s) 78, 451, 930
TaqI TCGA 6 cut(s) 150, 234, 445, 849, 1083, 1221
TaqII GACCGA 1 cut(s) 1007
TasI AATT 7 cut(s) 23, 146, 293, 661, 805, 995, 1063
TatI WGTACW 5 cut(s) 259, 610, 741, 1157, 1311
TfiI GAWTC 5 cut(s) 176, 278, 349, 820, 1070
Tru1I TTAA 8 cut(s) 288, 666, 695, 710, 756, 786, 930, 1262
Tru9I TTAA 8 cut(s) 288, 666, 695, 710, 756, 786, 930, 1262
TscAI CASTG 2 cut(s) 474, 850
TseFI GTSAC 3 cut(s) 640, 881, 1183
TseI GCWGC 3 cut(s) 273, 356, 603
Tsp45I GTSAC 3 cut(s) 640, 881, 1183
TspDTI ATGAA 6 cut(s) 32, 293, 445, 801, 1104, 1317
TspGWI ACGGA 1 cut(s) 287
TspRI CASTG 2 cut(s) 474, 850
Tth111I GACNNNGTC 1 cut(s) 230
VpaK11BI GGWCC 3 cut(s) 84, 424, 544
VspI ATTAAT 1 cut(s) 756
XagI CCTNNNNNAGG 1 cut(s) 519
XapI RAATTY 3 cut(s) 146, 293, 661
XbaI TCTAGA 1 cut(s) 136
XceI RCATGY 3 cut(s) 221, 639, 1238
XhoI CTCGAG 1 cut(s) 1220
XmiI GTMKAC 1 cut(s) 98
XmnI GAANNNNTTC 1 cut(s) 39
XspI CTAG 2 cut(s) 137, 1341
ZrmI AGTACT 1 cut(s) 743
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.