FvH4_5g35600

domain in FBox and BRCT domain containing plant proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000062
Physical Location & Seq
Reverse (-)
26055068 .. 26056689
1622 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g35600.t1

Sequence Viewer

Length: 1221 bp
ATGGCTTCAAATTCCAAGAGTCAATTGCGAATTACAGATAGGATCAGTGACTTACCAGATTCACTTATTTGTCACATCCTTTCCTTTCTGCCAACAAAGAATTCTGTATGCACCAGCATTTTGGCTTCAAGATGGAAGAGAGTCTGGGCCTCTGTTACTAGTCTAGACTTTCATGAAATATATTTTCCAGACTCCGAAAGCTTTGTGTTGTTTGTTAGTCGTGTATTTTACTTTCGCAACTCATCAGAAATTCAAAAGTTCAAACCGGAATGCTACTGTGTTGAGCGTTTCTCTCACATTGATGGTTGGATTCGAACTGCCCCTATGCATAATCTTGCTGAACTTGATCTTTGTGTTGAAAATTATGGATCATTTCTGGAGGATGAGAATCTCAAGTTGCCTAAAAGTGTTTTCATGTGCAAAACACTGGTTGTTTTGAAACTGAGGTCAATTATTATAATCAATACTCCTACTTCATGGTGTTTGCCATGTCTCAAGGTCCTACTTATTTCAGTTAGTTTTCCTGGTCATGACCTGATGGAAAAGCTTCTGCTTGGCTGCCCTGCGCTTGAAGATTTGGCTATATCTGGAACTGTTGGAGAAGGCTATTTGAATTTCAACGTCTCTGCTCTTGAACTTAAGAAGTTAGGGATCAGTCTTGACACTGAAAATGATGATAGATGTTTGGCTGATTACAATGATCTCAATGTTCTTGTTAGAGCTCCAAAGCTCGAATACTTTGGTCTTGAGCAAAACGTTTTGTCAAATTGTGTTTTGAAGAATTTAAAGTCTTTAGTCGAAGCCACTATTGATCTCACTTACCACGTACCAACTGAATATTCTGGCTTTGTTGGCCGTGCGACTGCGCTTTTGGCACAAATTTGCCATGTCAAATATTTGTCTCTTTCAGCACATGGTTTGGATGACTGCAATTGTGACGGACTAGGGGAATATGGTATTAAAGAGAAGGAGCTACTTTGGCATCCTCCTGAGTTGGTGCCGAATTGTCTGTTGTCACACGTCAAGACTATCTGTATCAATAGATTCCTGGGAAAGGACGATGAGTTTGAAGTGGCAAAATACTTGTTAAAGAATGGTGAAGTTTTGAATAGCATGAAAATTTGCACAGGTCGTAATATTGTGTGTACAAAGGAGGTGATGTTGGAGAAACTTCTAATGTTTGAGAGGGTTTCCAAGACATGTCAAGTTGAAATTGCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

407

Amino Acids

45.86

Weight (kDa)

5.75

Isoelectric Point (pI)

34.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 53 5.3e-06 F-box domain
LRR_At5g56370 PF24758 100 - 252 7.4e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 330 - 374 1.2e-12 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 458
AccB1I GGYRCC 1 cut(s) 997
AclI AACGTT 1 cut(s) 756
AclWI GGATC 3 cut(s) 50, 376, 659
AcoI YGGCCR 1 cut(s) 853
AcsI RAATTY 7 cut(s) 10, 100, 249, 613, 781, 879, 1119
AfaI GTAC 2 cut(s) 828, 1147
AfiI CCNNNNNNNGG 1 cut(s) 1054
AflII CTTAAG 1 cut(s) 638
AflIII ACRYGT 2 cut(s) 1018, 1199
AhlI ACTAGT 1 cut(s) 158
AjiI CACGTC 1 cut(s) 1021
AjnI CCWGG 2 cut(s) 523, 1047
AjuI GAANNNNNNNTTGG 4 cut(s) 85, 117, 823, 855
AluBI AGCT 5 cut(s) 201, 547, 722, 730, 973
AluI AGCT 5 cut(s) 201, 547, 722, 730, 973
Alw21I GWGCWC 1 cut(s) 724
Alw26I GTCTC 3 cut(s) 497, 628, 906
AlwI GGATC 3 cut(s) 50, 376, 659
AoxI GGCC 2 cut(s) 147, 853
ApeKI GCWGC 1 cut(s) 558
ApoI RAATTY 7 cut(s) 10, 100, 249, 613, 781, 879, 1119
ArsI GACNNNNNNTTYG 4 cut(s) 853, 885, 1049, 1081
Asp700I GAANNNNTTC 1 cut(s) 546
AspLEI GCGC 2 cut(s) 568, 868
AspS9I GGNCC 2 cut(s) 147, 499
AsuHPI GGTGA 2 cut(s) 1109, 1168
AsuII TTCGAA 1 cut(s) 313
AvaII GGWCC 1 cut(s) 499
BanI GGYRCC 1 cut(s) 997
BanII GRGCYC 1 cut(s) 724
Bbv12I GWGCWC 1 cut(s) 724
BbvI GCAGC 1 cut(s) 545
BccI CCATC 3 cut(s) 126, 296, 532
BceAI ACGGC 1 cut(s) 840
BciT130I CCWGG 2 cut(s) 525, 1049
BcoDI GTCTC 3 cut(s) 497, 628, 906
BcuI ACTAGT 1 cut(s) 158
BfaI CTAG 3 cut(s) 159, 164, 944
BfrI CTTAAG 1 cut(s) 638
BisI GCNGC 1 cut(s) 559
BlsI GCNGC 1 cut(s) 560
Bme1390I CCNGG 2 cut(s) 525, 1049
Bme18I GGWCC 1 cut(s) 499
BmgBI CACGTC 1 cut(s) 1021
BmgT120I GGNCC 2 cut(s) 147, 499
BmiI GGNNCC 1 cut(s) 999
BmrFI CCNGG 2 cut(s) 525, 1049
BmsI GCATC 1 cut(s) 991
BplI GAGNNNNNCTC 2 cut(s) 275, 307
BpmI CTGGAG 1 cut(s) 398
Bpu14I TTCGAA 1 cut(s) 313
BpuEI CTTGAG 3 cut(s) 377, 479, 767
BsaAI YACGTR 1 cut(s) 826
BsaBI GATNNNNATC 1 cut(s) 387
BsaJI CCNNGG 1 cut(s) 1048
BsaWI WCCGGW 1 cut(s) 265
BsaXI ACNNNNNCTCC 2 cut(s) 1145, 1175
Bsc4I CCNNNNNNNGG 1 cut(s) 1054
Bse1I ACTGG 1 cut(s) 432
Bse8I GATNNNNATC 1 cut(s) 387
BseBI CCWGG 2 cut(s) 525, 1049
BseDI CCNNGG 1 cut(s) 1048
BseGI GGATG 4 cut(s) 75, 388, 928, 982
BseJI GATNNNNATC 1 cut(s) 387
BseLI CCNNNNNNNGG 1 cut(s) 1054
BseMII CTCAG 2 cut(s) 434, 981
BseNI ACTGG 1 cut(s) 432
BseXI GCAGC 1 cut(s) 545
BshFI GGCC 2 cut(s) 149, 855
BshNI GGYRCC 1 cut(s) 997
BsiHKAI GWGCWC 1 cut(s) 724
BsiSI CCGG 1 cut(s) 266
BslI CCNNNNNNNGG 1 cut(s) 1054
BsmAI GTCTC 3 cut(s) 497, 628, 906
BsmBI CGTCTC 1 cut(s) 628
BsmI GAATGC 1 cut(s) 275
BsnI GGCC 2 cut(s) 149, 855
Bsp119I TTCGAA 1 cut(s) 313
Bsp1286I GDGCHC 1 cut(s) 724
Bsp1407I TGTACA 1 cut(s) 1145
Bsp143I GATC 6 cut(s) 42, 346, 368, 651, 700, 811
BspANI GGCC 2 cut(s) 149, 855
BspCNI CTCAG 2 cut(s) 435, 982
BspHI TCATGA 2 cut(s) 172, 529
BspLI GGNNCC 1 cut(s) 999
BspPI GGATC 3 cut(s) 50, 376, 659
BspT104I TTCGAA 1 cut(s) 313
BspT107I GGYRCC 1 cut(s) 997
BspTI CTTAAG 1 cut(s) 638
BsrGI TGTACA 1 cut(s) 1145
BsrI ACTGG 1 cut(s) 432
BssECI CCNNGG 1 cut(s) 1048
BssMI GATC 6 cut(s) 42, 346, 368, 651, 700, 811
Bst2UI CCWGG 2 cut(s) 525, 1049
Bst4CI ACNGT 2 cut(s) 278, 595
Bst6I CTCTTC 1 cut(s) 131
BstAFI CTTAAG 1 cut(s) 638
BstAUI TGTACA 1 cut(s) 1145
BstBAI YACGTR 1 cut(s) 826
BstBI TTCGAA 1 cut(s) 313
BstDEI CTNAG 2 cut(s) 443, 990
BstENI CCTNNNNNAGG 1 cut(s) 1052
BstF5I GGATG 4 cut(s) 75, 388, 928, 982
BstHHI GCGC 2 cut(s) 568, 868
BstKTI GATC 6 cut(s) 45, 349, 371, 654, 703, 814
BstMAI GTCTC 3 cut(s) 497, 628, 906
BstMBI GATC 6 cut(s) 42, 346, 368, 651, 700, 811
BstMWI GCNNNNNNNGC 3 cut(s) 852, 872, 979
BstNI CCWGG 2 cut(s) 525, 1049
BstNSI RCATGY 1 cut(s) 1203
BstSCI CCNGG 2 cut(s) 523, 1047
BstV1I GCAGC 1 cut(s) 545
BstXI CCANNNNNNTGG 1 cut(s) 121
BsuRI GGCC 2 cut(s) 149, 855
BtrI CACGTC 1 cut(s) 1021
BtsCI GGATG 4 cut(s) 75, 388, 928, 982
BtsIMutI CAGTG 3 cut(s) 52, 425, 663
CciI TCATGA 2 cut(s) 172, 529
CfoI GCGC 2 cut(s) 568, 868
Cfr13I GGNCC 2 cut(s) 147, 499
Csp6I GTAC 2 cut(s) 827, 1146
CviAII CATG 9 cut(s) 173, 415, 477, 489, 530, 887, 914, 1114, 1200
CviQI GTAC 2 cut(s) 827, 1146
DdeI CTNAG 2 cut(s) 443, 990
DpnI GATC 6 cut(s) 44, 348, 370, 653, 702, 813
DpnII GATC 6 cut(s) 42, 346, 368, 651, 700, 811
DraI TTTAAA 1 cut(s) 786
EaeI YGGCCR 1 cut(s) 853
Eam1104I CTCTTC 1 cut(s) 131
EarI CTCTTC 1 cut(s) 131
Ecl136II GAGCTC 1 cut(s) 722
Eco24I GRGCYC 1 cut(s) 724
Eco47I GGWCC 1 cut(s) 499
Eco53kI GAGCTC 1 cut(s) 722
EcoICRI GAGCTC 1 cut(s) 722
EcoNI CCTNNNNNAGG 1 cut(s) 1052
EcoO109I RGGNCCY 1 cut(s) 499
EcoRI GAATTC 1 cut(s) 100
EcoRII CCWGG 2 cut(s) 523, 1047
EcoT22I ATGCAT 1 cut(s) 330
EcoT38I GRGCYC 1 cut(s) 724
Esp3I CGTCTC 1 cut(s) 628
FaeI CATG 9 cut(s) 176, 418, 480, 492, 533, 890, 917, 1117, 1203
FatI CATG 9 cut(s) 172, 414, 476, 488, 529, 886, 913, 1113, 1199
Fnu4HI GCNGC 1 cut(s) 559
FokI GGATG 4 cut(s) 62, 395, 935, 969
FriOI GRGCYC 1 cut(s) 724
Fsp4HI GCNGC 1 cut(s) 559
FspBI CTAG 3 cut(s) 159, 164, 944
GlaI GCGC 2 cut(s) 567, 867
GluI GCNGC 1 cut(s) 559
GsuI CTGGAG 1 cut(s) 398
HaeIII GGCC 2 cut(s) 149, 855
HapII CCGG 1 cut(s) 266
HhaI GCGC 2 cut(s) 568, 868
Hin1II CATG 9 cut(s) 176, 418, 480, 492, 533, 890, 917, 1117, 1203
Hin6I GCGC 2 cut(s) 566, 866
HinP1I GCGC 2 cut(s) 566, 866
HindIII AAGCTT 2 cut(s) 199, 545
HinfI GANTC 7 cut(s) 19, 59, 141, 191, 310, 388, 1044
HpaII CCGG 1 cut(s) 266
HphI GGTGA 2 cut(s) 1109, 1168
Hpy166II GTNNAC 1 cut(s) 1146
Hpy188I TCNGA 2 cut(s) 196, 247
Hpy8I GTNNAC 1 cut(s) 1146
HpyAV CCTTC 2 cut(s) 596, 961
HpyCH4III ACNGT 2 cut(s) 278, 595
HpyCH4IV ACGT 4 cut(s) 621, 756, 825, 1020
HpyCH4V TGCA 5 cut(s) 111, 328, 420, 930, 1125
HpyF10VI GCNNNNNNNGC 3 cut(s) 852, 872, 979
HpyF3I CTNAG 2 cut(s) 443, 990
HpySE526I ACGT 4 cut(s) 621, 756, 825, 1020
Hsp92II CATG 9 cut(s) 176, 418, 480, 492, 533, 890, 917, 1117, 1203
HspAI GCGC 2 cut(s) 566, 866
Kzo9I GATC 6 cut(s) 42, 346, 368, 651, 700, 811
LmnI GCTCC 2 cut(s) 727, 970
Lsp1109I GCAGC 1 cut(s) 545
LweI GCATC 1 cut(s) 991
MaeI CTAG 3 cut(s) 159, 164, 944
MaeII ACGT 4 cut(s) 621, 756, 825, 1020
MaeIII GTNAC 5 cut(s) 47, 71, 154, 935, 1014
MalI GATC 6 cut(s) 44, 348, 370, 653, 702, 813
MboI GATC 6 cut(s) 42, 346, 368, 651, 700, 811
MboII GAAGA 3 cut(s) 148, 584, 790
MfeI CAATTG 2 cut(s) 23, 931
MhlI GDGCHC 1 cut(s) 724
MlyI GAGTC 3 cut(s) 28, 150, 185
MmeI TCCRAC 3 cut(s) 287, 577, 1143
MnlI CCTC 6 cut(s) 160, 373, 438, 996, 1147, 1179
Mph1103I ATGCAT 1 cut(s) 330
MroXI GAANNNNTTC 1 cut(s) 546
MseI TTAA 4 cut(s) 639, 785, 960, 1088
MslI CAYNNNNRTG 1 cut(s) 300
MspCI CTTAAG 1 cut(s) 638
MspI CCGG 1 cut(s) 266
MspR9I CCNGG 2 cut(s) 525, 1049
MunI CAATTG 2 cut(s) 23, 931
Mva1269I GAATGC 1 cut(s) 275
MvaI CCWGG 2 cut(s) 525, 1049
MwoI GCNNNNNNNGC 3 cut(s) 852, 872, 979
NdeII GATC 6 cut(s) 42, 346, 368, 651, 700, 811
NlaIII CATG 9 cut(s) 176, 418, 480, 492, 533, 890, 917, 1117, 1203
NlaIV GGNNCC 1 cut(s) 999
NmuCI GTSAC 4 cut(s) 47, 71, 935, 1014
NsiI ATGCAT 1 cut(s) 330
NspI RCATGY 1 cut(s) 1203
NspV TTCGAA 1 cut(s) 313
PagI TCATGA 2 cut(s) 172, 529
PciI ACATGT 1 cut(s) 1199
PctI GAATGC 1 cut(s) 275
PdmI GAANNNNTTC 1 cut(s) 546
PfeI GAWTC 4 cut(s) 59, 310, 388, 1044
PkrI GCNGC 1 cut(s) 560
PleI GAGTC 3 cut(s) 27, 149, 185
PpsI GAGTC 3 cut(s) 27, 149, 185
Ppu21I YACGTR 1 cut(s) 826
PpuMI RGGWCCY 1 cut(s) 499
PscI ACATGT 1 cut(s) 1199
PsiI TTATAA 1 cut(s) 458
Psp124BI GAGCTC 1 cut(s) 724
Psp1406I AACGTT 1 cut(s) 756
Psp5II RGGWCCY 1 cut(s) 499
Psp6I CCWGG 2 cut(s) 523, 1047
PspGI CCWGG 2 cut(s) 523, 1047
PspN4I GGNNCC 1 cut(s) 999
PspPI GGNCC 2 cut(s) 147, 499
PspPPI RGGWCCY 1 cut(s) 499
RsaI GTAC 2 cut(s) 828, 1147
RsaNI GTAC 2 cut(s) 827, 1146
RseI CAYNNNNRTG 1 cut(s) 300
SacI GAGCTC 1 cut(s) 724
SaqAI TTAA 4 cut(s) 639, 785, 960, 1088
SatI GCNGC 1 cut(s) 559
Sau3AI GATC 6 cut(s) 42, 346, 368, 651, 700, 811
Sau96I GGNCC 2 cut(s) 147, 499
SchI GAGTC 3 cut(s) 28, 150, 185
ScrFI CCNGG 2 cut(s) 525, 1049
SduI GDGCHC 1 cut(s) 724
SfaNI GCATC 1 cut(s) 991
SfuI TTCGAA 1 cut(s) 313
SinI GGWCC 1 cut(s) 499
SmiMI CAYNNNNRTG 1 cut(s) 300
SmlI CTYRAG 4 cut(s) 392, 494, 638, 746
SmoI CTYRAG 4 cut(s) 392, 494, 638, 746
SpeI ACTAGT 1 cut(s) 158
SspI AATATT 3 cut(s) 839, 896, 1138
SspMI CTAG 3 cut(s) 159, 164, 944
SstI GAGCTC 1 cut(s) 724
StyD4I CCNGG 2 cut(s) 523, 1047
TaaI ACNGT 2 cut(s) 278, 595
TaiI ACGT 4 cut(s) 624, 759, 828, 1023
TaqI TCGA 3 cut(s) 313, 732, 798
TatI WGTACW 1 cut(s) 1145
TfiI GAWTC 4 cut(s) 59, 310, 388, 1044
Tru1I TTAA 4 cut(s) 639, 785, 960, 1088
Tru9I TTAA 4 cut(s) 639, 785, 960, 1088
TscAI CASTG 3 cut(s) 52, 432, 670
TseFI GTSAC 4 cut(s) 47, 71, 935, 1014
TseI GCWGC 1 cut(s) 558
Tsp45I GTSAC 4 cut(s) 47, 71, 935, 1014
TspDTI ATGAA 5 cut(s) 161, 189, 403, 465, 1130
TspGWI ACGGA 1 cut(s) 954
TspRI CASTG 3 cut(s) 52, 432, 670
Vha464I CTTAAG 1 cut(s) 638
VpaK11BI GGWCC 1 cut(s) 499
XagI CCTNNNNNAGG 1 cut(s) 1052
XapI RAATTY 7 cut(s) 10, 100, 249, 613, 781, 879, 1119
XbaI TCTAGA 1 cut(s) 163
XceI RCATGY 1 cut(s) 1203
XmnI GAANNNNTTC 1 cut(s) 546
XspI CTAG 3 cut(s) 159, 164, 944
Zsp2I ATGCAT 1 cut(s) 330
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.