Rmu_sc0004142.1_g000027

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004142.1
OG0000062
Physical Location & Seq
Forward (+)
125545 .. 131131
5587 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004142.1_g000027.1.cds

Sequence Viewer

Length: 2781 bp
atggattccaaatcaaaacgtccagaaggagctgaagataggatcaaccaattaccggacgatattcttgttcatatactatcctatattccgacggtctattctgttcgaaccatggttttgtctaaaagatggaacaacttatggaccttcgtccccagcctacagttcgaccaactagataatcgcataggacattatcgaacttggtatacttttgatgattttgcgaagtttgttgatggtgcactctcgttacacaactcgtcgacaatcagaaagtttcgtcttcatattgaacgcaacattcagcttcgagaggaaggtgtttctcgcattcgtgactggatatgcactgccatgaggcatgaggtctgtgaacttgatctttctttttgcccttatcagtggagagagaagatagagttgaatctgcctcaaagagttttcttgtgcaaaactctggaggttttgaaggtacattcaaattgtatcaactatcctcctactaaaccaggttactttccgagcctcaagttcgccaaagttacctcagaacatggagataattcctcaatgggagaacttttttgtaactgccctgtacttgaagagttgtctatcgatgcccgtcttatggaaaaagatgtcaaaatctggatctctgcacctgaattgaaaactttaaggactagaattcttgcaaatgatgatgaaaaaaaggttaaagggatttctatcaatgccccaaagcttgaaaacctttttgtctatggcactgatttgacaaggtatgtcttgcggaatgcaaaacccctcgtcaaagccaacatagaactcacaaatttcgaagaaaatttgagtccagagcttttgaaccgtgcaactgctttacttgcaggagtttccagtgttgaatatttgcgtcagtggagagagaagatagagttgaatctgcctcgaagagttttcttgtgcaaaactctggaggttttgaaggtacattcaaattgtatcaactatcctcctactaaaccaggttactttccaagcctcaagttcgccaaagttacctcagaacatggagataattcctcaatgggagaacttttttgtaactgccctgtacttgaagagttgtctatcgatgcccatcttatggaaaaagatgtcaaaatctggatctctgcacctgaattgaaaactttaaggactagaattcttgtaaatgatgatgaaaaaaaggttaaagggatttctatcaatgccccaaagcttgaaaacctttttgtctatggcactgatttgacaaggtatgtcttgcggaatgcaaaacccctcgtcaaagccaacatagaactcacaaatttcgaagaaaatttgagtccagagcttttgaaccgtgcaactgctttacttgcaggagtttccagtgttgaatatttgcatatatcaggtcctaattatgtggcatgttcactgcccaatttctgtaatttgaagcaattgaagctcattctttttgggtgctcttatttggaatatgtaatggagttgctcaagcgatcacctaagcttgaagatcttatcttagatattgatgtccgctcatggtatcgtgaagaatatgtcgaaggatacgaccccttcaagccaccagagattgtgcctatttgtgtggtgtcctaccttaagactgtttccattactcacatcacgggacatgatgatcaggtaggtgtggtaaagtatttgttaaagtatggtcaagttctgaggaatatgactatattcacctgtggtgctcttctttttaagactcgacatatcacagaagagaagttccagaggaaaattttgaagtatcacaagagttcaaacacttgtgaggttgaagttaagtttgaaaataaggggattccatataattgtatccagacccggccttcccaagggcagccctggcaacagcccatggcccaagggaaggtgggggaggagaagcaacaccaggtgcacgagacaggggaagtggattctgagagaacaaggaagtcaaatactgtcaaagcaccattgcctaagctggtcgctgttgcaatcattgtacttacgagtcttcttagctccgagattccagggaatccttttagggttttggaaatcgtaaagaacagcttgctgcctgtctggcggcgcccccatgtcaactatgggttccggcctcatcgacgagtggcgggtgttgtcggacgggatcgtggggcctcagggctccgtatctggtttaggcttcgtctttccgggtcgtatacgacgtttctttcttctcgggaggtagcgcaggcgtgcaggatgggtggttggtattcaatgcaggcttggagcaggtggcctgtggccagatcgtggcggcggtatgccatggattgtatgacgctggctatctctctgagatgggtcgataggaggatcaagcggacagacaagccagggcggcaaggcatggcgagtttcttgctggatcttgcgctatggaggtggattgccggcgggccacctgaggtgaaggaagacgggtttggtcaatttgaggtgccatggatgtggtgtcattcctggggacgaattggtttaatttcggtgttatcttatggtcaatgtgctgacgagcgatccttgcacgtggtctggtatctttgggacacggtgtggaagagggcgttggtttttctggtgattgtccatgagtggtatcaagattctcaggatttcttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

926

Amino Acids

107.03

Weight (kDa)

9.02

Isoelectric Point (pI)

44.65

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2379
Acc36I ACCTGC 1 cut(s) 2379
AccB1I GGYRCC 2 cut(s) 2196, 2596
AccB7I CCANNNNNTGG 2 cut(s) 1159, 2409
AccBSI CCGCTC 1 cut(s) 1608
AccI GTMKAC 3 cut(s) 212, 269, 2312
AclWI GGATC 7 cut(s) 50, 668, 1190, 2265, 2480, 2532, 2670
AcoI YGGCCR 1 cut(s) 2400
AcsI RAATTY 7 cut(s) 696, 844, 856, 1218, 1366, 1378, 1854
AcuI CTGAAG 1 cut(s) 54
AcvI CACGTG 1 cut(s) 2686
AcyI GRCGYC 1 cut(s) 2197
AdeI CACNNNGTG 2 cut(s) 2014, 2712
AfaI GTAC 5 cut(s) 480, 606, 1002, 1128, 2109
AfiI CCNNNNNNNGG 6 cut(s) 55, 637, 1159, 1952, 1987, 2409
AflII CTTAAG 1 cut(s) 1691
AjnI CCWGG 7 cut(s) 514, 1036, 1961, 2010, 2137, 2491, 2618
AjuI GAANNNNNNNTTGG 4 cut(s) 2565, 2597, 2708, 2740
Alw21I GWGCWC 4 cut(s) 250, 1532, 1807, 2019
Alw26I GTCTC 1 cut(s) 2015
Alw44I GTGCAC 2 cut(s) 246, 2015
AlwI GGATC 7 cut(s) 50, 668, 1190, 2265, 2480, 2532, 2670
Ama87I CYCGRG 1 cut(s) 2331
AoxI GGCC 7 cut(s) 1943, 1977, 2222, 2265, 2393, 2400, 2555
ApaLI GTGCAC 2 cut(s) 246, 2015
ApeKI GCWGC 2 cut(s) 1957, 2182
ApoI RAATTY 7 cut(s) 696, 844, 856, 1218, 1366, 1378, 1854
AspLEI GCGC 3 cut(s) 2199, 2344, 2533
AspS9I GGNCC 5 cut(s) 147, 1457, 1978, 2265, 2555
AsuC2I CCSGG 2 cut(s) 1942, 2305
AsuHPI GGTGA 4 cut(s) 1560, 1786, 2578, 2749
AsuII TTCGAA 3 cut(s) 109, 849, 1371
AvaI CYCGRG 1 cut(s) 2331
AvaII GGWCC 2 cut(s) 147, 1457
AxyI CCTNAGG 2 cut(s) 2269, 2562
BaeGI GKGCMC 2 cut(s) 250, 2019
BalI TGGCCA 1 cut(s) 2402
BanI GGYRCC 2 cut(s) 2196, 2596
BanII GRGCYC 1 cut(s) 2277
BauI CACGAG 1 cut(s) 2018
BbrPI CACGTG 1 cut(s) 2686
BbsI GAAGAC 3 cut(s) 281, 2111, 2580
Bbv12I GWGCWC 4 cut(s) 250, 1532, 1807, 2019
BbvI GCAGC 2 cut(s) 1969, 2169
BccI CCATC 5 cut(s) 126, 236, 1161, 2350, 2451
BcgI CGANNNNNNTGC 2 cut(s) 2500, 2534
BciT130I CCWGG 7 cut(s) 516, 1038, 1963, 2012, 2139, 2493, 2620
BciVI GTATCC 2 cut(s) 1631, 1943
BclI TGATCA 1 cut(s) 1729
BcnI CCSGG 2 cut(s) 1942, 2305
BcoDI GTCTC 1 cut(s) 2015
BfaI CTAG 3 cut(s) 179, 693, 1215
BfmI CTRYAG 1 cut(s) 164
BfoI RGCGCY 1 cut(s) 2200
BfrI CTTAAG 1 cut(s) 1691
BfuAI ACCTGC 1 cut(s) 2379
BfuI GTATCC 2 cut(s) 1631, 1943
BglI GCCNNNNNGGC 2 cut(s) 2191, 2497
BglII AGATCT 1 cut(s) 1582
BisI GCNGC 5 cut(s) 1958, 2183, 2195, 2414, 2498
BlsI GCNGC 5 cut(s) 1959, 2184, 2196, 2415, 2499
Bme1390I CCNGG 9 cut(s) 516, 1038, 1942, 1963, 2012, 2139, 2305, 2493, 2620
Bme18I GGWCC 2 cut(s) 147, 1457
BmeT110I CYCGRG 1 cut(s) 2331
BmgT120I GGNCC 5 cut(s) 147, 1457, 1978, 2265, 2555
BmiI GGNNCC 5 cut(s) 2198, 2219, 2266, 2276, 2598
BmrFI CCNGG 9 cut(s) 516, 1038, 1942, 1963, 2012, 2139, 2305, 2493, 2620
BmsI GCATC 2 cut(s) 616, 1138
BoxI GACNNNNGTC 1 cut(s) 152
BpiI GAAGAC 3 cut(s) 281, 2111, 2580
BpmI CTGGAG 2 cut(s) 485, 1007
Bpu10I CCTNAGC 2 cut(s) 1572, 2082
Bpu14I TTCGAA 3 cut(s) 109, 849, 1371
BpuEI CTTGAG 3 cut(s) 518, 1040, 1544
BpuMI CCSGG 2 cut(s) 1942, 2305
Bsa29I ATCGAT 2 cut(s) 624, 1146
BsaAI YACGTR 1 cut(s) 2686
BsaBI GATNNNNATC 3 cut(s) 737, 1152, 1259
BsaHI GRCGYC 1 cut(s) 2197
BsaWI WCCGGW 1 cut(s) 55
Bsc4I CCNNNNNNNGG 6 cut(s) 55, 637, 1159, 1952, 1987, 2409
Bse118I RCCGGY 1 cut(s) 2549
Bse1I ACTGG 3 cut(s) 350, 909, 1431
Bse21I CCTNAGG 2 cut(s) 2269, 2562
Bse3DI GCAATG 1 cut(s) 2075
Bse8I GATNNNNATC 3 cut(s) 737, 1152, 1259
BseBI CCWGG 7 cut(s) 516, 1038, 1963, 2012, 2139, 2493, 2620
BseCI ATCGAT 2 cut(s) 624, 1146
BseGI GGATG 2 cut(s) 2361, 2610
BseJI GATNNNNATC 3 cut(s) 737, 1152, 1259
BseLI CCNNNNNNNGG 6 cut(s) 55, 637, 1159, 1952, 1987, 2409
BseMI GCAATG 1 cut(s) 2075
BseMII CTCAG 8 cut(s) 567, 1089, 1766, 2031, 2283, 2444, 2553, 2780
BseNI ACTGG 3 cut(s) 350, 909, 1431
BseRI GAGGAG 1 cut(s) 2012
BseSI GKGCMC 2 cut(s) 250, 2019
BseXI GCAGC 2 cut(s) 1969, 2169
BseYI CCCAGC 1 cut(s) 158
BsgI GTGCAG 3 cut(s) 651, 1173, 2371
BshFI GGCC 7 cut(s) 1945, 1979, 2224, 2267, 2395, 2402, 2557
BshNI GGYRCC 2 cut(s) 2196, 2596
BshVI ATCGAT 2 cut(s) 624, 1146
BsiHKAI GWGCWC 4 cut(s) 250, 1532, 1807, 2019
BsiHKCI CYCGRG 1 cut(s) 2331
BsiSI CCGG 5 cut(s) 56, 1942, 2221, 2304, 2550
BslFI GGGAC 4 cut(s) 140, 1734, 2637, 2717
BslI CCNNNNNNNGG 6 cut(s) 55, 637, 1159, 1952, 1987, 2409
BsmAI GTCTC 1 cut(s) 2015
BsmFI GGGAC 4 cut(s) 140, 1734, 2637, 2717
BsmI GAATGC 3 cut(s) 336, 811, 1333
BsnI GGCC 7 cut(s) 1945, 1979, 2224, 2267, 2395, 2402, 2557
BsoBI CYCGRG 1 cut(s) 2331
Bsp119I TTCGAA 3 cut(s) 109, 849, 1371
Bsp1286I GDGCHC 5 cut(s) 250, 1532, 1807, 2019, 2277
Bsp19I CCATGG 4 cut(s) 114, 1974, 2424, 2600
BspANI GGCC 7 cut(s) 1945, 1979, 2224, 2267, 2395, 2402, 2557
BspCNI CTCAG 8 cut(s) 566, 1088, 1767, 2032, 2282, 2445, 2554, 2779
BspDI ATCGAT 2 cut(s) 624, 1146
BspLI GGNNCC 5 cut(s) 2198, 2219, 2266, 2276, 2598
BspMI ACCTGC 1 cut(s) 2379
BspPI GGATC 7 cut(s) 50, 668, 1190, 2265, 2480, 2532, 2670
BspQI GCTCTTC 1 cut(s) 1812
BspT104I TTCGAA 3 cut(s) 109, 849, 1371
BspT107I GGYRCC 2 cut(s) 2196, 2596
BspTI CTTAAG 1 cut(s) 1691
BsrBI CCGCTC 1 cut(s) 1608
BsrDI GCAATG 1 cut(s) 2075
BsrFI RCCGGY 1 cut(s) 2549
BsrI ACTGG 3 cut(s) 350, 909, 1431
BssAI RCCGGY 1 cut(s) 2549
BssNAI GTATAC 2 cut(s) 213, 2313
BssNI GRCGYC 1 cut(s) 2197
BssSI CACGAG 1 cut(s) 2018
BssT1I CCWWGG 6 cut(s) 114, 1951, 1974, 1981, 2424, 2600
Bst1107I GTATAC 2 cut(s) 213, 2313
Bst2BI CACGAG 1 cut(s) 2018
Bst2UI CCWGG 7 cut(s) 516, 1038, 1963, 2012, 2139, 2493, 2620
Bst4CI ACNGT 7 cut(s) 97, 168, 881, 1403, 1699, 2065, 2710
Bst6I CTCTTC 6 cut(s) 606, 958, 1128, 1812, 1830, 2711
BstACI GRCGYC 1 cut(s) 2197
BstAFI CTTAAG 1 cut(s) 1691
BstBAI YACGTR 1 cut(s) 2686
BstBI TTCGAA 3 cut(s) 109, 849, 1371
BstC8I GCNNGC 7 cut(s) 2180, 2346, 2350, 2379, 2442, 2551, 2555
BstDSI CCRYGG 4 cut(s) 114, 1974, 2424, 2600
BstENI CCTNNNNNAGG 1 cut(s) 1950
BstF5I GGATG 2 cut(s) 2361, 2610
BstH2I RGCGCY 1 cut(s) 2200
BstHHI GCGC 3 cut(s) 2199, 2344, 2533
BstMAI GTCTC 1 cut(s) 2015
BstMWI GCNNNNNNNGC 7 cut(s) 896, 1418, 1510, 1963, 2191, 2497, 2680
BstNI CCWGG 7 cut(s) 516, 1038, 1963, 2012, 2139, 2493, 2620
BstNSI RCATGY 1 cut(s) 1476
BstPAI GACNNNNGTC 1 cut(s) 152
BstSCI CCNGG 9 cut(s) 514, 1036, 1940, 1961, 2010, 2137, 2303, 2491, 2618
BstSFI CTRYAG 1 cut(s) 164
BstSLI GKGCMC 2 cut(s) 250, 2019
BstV1I GCAGC 2 cut(s) 1969, 2169
BstV2I GAAGAC 3 cut(s) 281, 2111, 2580
BstX2I RGATCY 4 cut(s) 660, 1182, 1582, 2524
BstXI CCANNNNNNTGG 1 cut(s) 2607
BstYI RGATCY 4 cut(s) 660, 1182, 1582, 2524
BstZ17I GTATAC 2 cut(s) 213, 2313
Bsu15I ATCGAT 2 cut(s) 624, 1146
Bsu36I CCTNAGG 2 cut(s) 2269, 2562
BsuI GTATCC 2 cut(s) 1631, 1943
BsuRI GGCC 7 cut(s) 1945, 1979, 2224, 2267, 2395, 2402, 2557
BsuTUI ATCGAT 2 cut(s) 624, 1146
BtgI CCRYGG 4 cut(s) 114, 1974, 2424, 2600
BtsCI GGATG 2 cut(s) 2361, 2610
BtsI GCAGTG 2 cut(s) 354, 1478
BtsIMutI CAGTG 8 cut(s) 354, 413, 777, 916, 935, 1299, 1438, 1478
BveI ACCTGC 1 cut(s) 2379
Cac8I GCNNGC 7 cut(s) 2180, 2346, 2350, 2379, 2442, 2551, 2555
CfoI GCGC 3 cut(s) 2199, 2344, 2533
Cfr10I RCCGGY 1 cut(s) 2549
Cfr13I GGNCC 5 cut(s) 147, 1457, 1978, 2265, 2555
ClaI ATCGAT 2 cut(s) 624, 1146
CseI GACGC 2 cut(s) 914, 2446
CsiI ACCWGGT 3 cut(s) 514, 1036, 2010
Csp6I GTAC 5 cut(s) 479, 605, 1001, 1127, 2108
CviQI GTAC 5 cut(s) 479, 605, 1001, 1127, 2108
DinI GGCGCC 1 cut(s) 2198
DraIII CACNNNGTG 2 cut(s) 2014, 2712
EaeI YGGCCR 1 cut(s) 2400
Eam1104I CTCTTC 6 cut(s) 606, 958, 1128, 1812, 1830, 2711
EarI CTCTTC 6 cut(s) 606, 958, 1128, 1812, 1830, 2711
Eco130I CCWWGG 6 cut(s) 114, 1951, 1974, 1981, 2424, 2600
Eco24I GRGCYC 1 cut(s) 2277
Eco47I GGWCC 2 cut(s) 147, 1457
Eco57I CTGAAG 1 cut(s) 54
Eco72I CACGTG 1 cut(s) 2686
Eco81I CCTNAGG 2 cut(s) 2269, 2562
Eco88I CYCGRG 1 cut(s) 2331
EcoNI CCTNNNNNAGG 1 cut(s) 1950
EcoO109I RGGNCCY 2 cut(s) 1457, 2265
EcoRI GAATTC 2 cut(s) 696, 1218
EcoRII CCWGG 7 cut(s) 514, 1036, 1961, 2010, 2137, 2491, 2618
EcoT14I CCWWGG 6 cut(s) 114, 1951, 1974, 1981, 2424, 2600
EcoT38I GRGCYC 1 cut(s) 2277
EgeI GGCGCC 1 cut(s) 2198
EheI GGCGCC 1 cut(s) 2198
ErhI CCWWGG 6 cut(s) 114, 1951, 1974, 1981, 2424, 2600
FalI AAGNNNNNCTT 2 cut(s) 2162, 2194
FaqI GGGAC 4 cut(s) 140, 1734, 2637, 2717
FauI CCCGC 2 cut(s) 2233, 2546
FbaI TGATCA 1 cut(s) 1729
FblI GTMKAC 3 cut(s) 212, 269, 2312
Fnu4HI GCNGC 5 cut(s) 1958, 2183, 2195, 2414, 2498
FokI GGATG 2 cut(s) 2368, 2617
FriOI GRGCYC 1 cut(s) 2277
Fsp4HI GCNGC 5 cut(s) 1958, 2183, 2195, 2414, 2498
FspBI CTAG 3 cut(s) 179, 693, 1215
GlaI GCGC 3 cut(s) 2198, 2343, 2532
GluI GCNGC 5 cut(s) 1958, 2183, 2195, 2414, 2498
GsaI CCCAGC 1 cut(s) 162
GsuI CTGGAG 2 cut(s) 485, 1007
HaeII RGCGCY 1 cut(s) 2200
HaeIII GGCC 7 cut(s) 1945, 1979, 2224, 2267, 2395, 2402, 2557
HapII CCGG 5 cut(s) 56, 1942, 2221, 2304, 2550
HgaI GACGC 2 cut(s) 914, 2446
HhaI GCGC 3 cut(s) 2199, 2344, 2533
Hin1I GRCGYC 1 cut(s) 2197
Hin6I GCGC 3 cut(s) 2197, 2342, 2531
HinP1I GCGC 3 cut(s) 2197, 2342, 2531
HincII GTYRAC 2 cut(s) 270, 2209
HindII GTYRAC 2 cut(s) 270, 2209
HindIII AAGCTT 3 cut(s) 752, 1274, 1574
HpaII CCGG 5 cut(s) 56, 1942, 2221, 2304, 2550
HphI GGTGA 4 cut(s) 1560, 1786, 2578, 2749
Hpy166II GTNNAC 8 cut(s) 213, 248, 270, 380, 1478, 2017, 2209, 2313
Hpy8I GTNNAC 8 cut(s) 213, 248, 270, 380, 1478, 2017, 2209, 2313
Hpy99I CGWCG 4 cut(s) 97, 271, 2235, 2320
HpyCH4III ACNGT 7 cut(s) 97, 168, 881, 1403, 1699, 2065, 2710
HpyCH4IV ACGT 3 cut(s) 19, 2318, 2685
HpyF10VI GCNNNNNNNGC 7 cut(s) 896, 1418, 1510, 1963, 2191, 2497, 2680
HpySE526I ACGT 3 cut(s) 19, 2318, 2685
Hsp92I GRCGYC 1 cut(s) 2197
HspAI GCGC 3 cut(s) 2197, 2342, 2531
KasI GGCGCC 1 cut(s) 2196
KroI GCCGGC 1 cut(s) 2549
KroNI GCCGGC 1 cut(s) 2551
Ksp22I TGATCA 1 cut(s) 1729
LguI GCTCTTC 1 cut(s) 1812
LmnI GCTCC 4 cut(s) 29, 2132, 2280, 2385
Lsp1109I GCAGC 2 cut(s) 1969, 2169
LweI GCATC 2 cut(s) 616, 1138
MabI ACCWGGT 3 cut(s) 514, 1036, 2010
MaeI CTAG 3 cut(s) 179, 693, 1215
MaeII ACGT 3 cut(s) 19, 2318, 2685
MaeIII GTNAC 8 cut(s) 255, 341, 518, 547, 593, 1040, 1069, 1115
MbiI CCGCTC 1 cut(s) 1608
MfeI CAATTG 1 cut(s) 1505
MflI RGATCY 4 cut(s) 660, 1182, 1582, 2524
MhlI GDGCHC 5 cut(s) 250, 1532, 1807, 2019, 2277
MlsI TGGCCA 1 cut(s) 2402
MluNI TGGCCA 1 cut(s) 2402
Mly113I GGCGCC 1 cut(s) 2197
MlyI GAGTC 4 cut(s) 871, 1393, 1813, 2125
MmeI TCCRAC 2 cut(s) 116, 2230
Mox20I TGGCCA 1 cut(s) 2402
MroNI GCCGGC 1 cut(s) 2549
MscI TGGCCA 1 cut(s) 2402
MseI TTAA 9 cut(s) 686, 726, 1208, 1248, 1692, 1757, 1815, 1899, 2636
MslI CAYNNNNRTG 2 cut(s) 359, 2605
Msp20I TGGCCA 1 cut(s) 2402
MspCI CTTAAG 1 cut(s) 1691
MspI CCGG 5 cut(s) 56, 1942, 2221, 2304, 2550
MspR9I CCNGG 9 cut(s) 516, 1038, 1942, 1963, 2012, 2139, 2305, 2493, 2620
MunI CAATTG 1 cut(s) 1505
Mva1269I GAATGC 3 cut(s) 336, 811, 1333
MvaI CCWGG 7 cut(s) 516, 1038, 1963, 2012, 2139, 2493, 2620
MwoI GCNNNNNNNGC 7 cut(s) 896, 1418, 1510, 1963, 2191, 2497, 2680
NaeI GCCGGC 1 cut(s) 2551
NarI GGCGCC 1 cut(s) 2197
NciI CCSGG 2 cut(s) 1942, 2305
NcoI CCATGG 4 cut(s) 114, 1974, 2424, 2600
NgoMIV GCCGGC 1 cut(s) 2549
NlaIV GGNNCC 5 cut(s) 2198, 2219, 2266, 2276, 2598
NmuCI GTSAC 1 cut(s) 341
NspI RCATGY 1 cut(s) 1476
NspV TTCGAA 3 cut(s) 109, 849, 1371
PaqCI CACCTGC 1 cut(s) 2379
PciSI GCTCTTC 1 cut(s) 1812
PcsI WCGNNNNNNNCGW 2 cut(s) 1638, 2315
PctI GAATGC 3 cut(s) 336, 811, 1333
PdiI GCCGGC 1 cut(s) 2551
PfeI GAWTC 8 cut(s) 5, 430, 952, 1918, 2036, 2134, 2143, 2762
PflMI CCANNNNNTGG 2 cut(s) 1159, 2409
PkrI GCNGC 5 cut(s) 1959, 2184, 2196, 2415, 2499
PleI GAGTC 4 cut(s) 870, 1392, 1813, 2124
PluTI GGCGCC 1 cut(s) 2200
PmaCI CACGTG 1 cut(s) 2686
PmlI CACGTG 1 cut(s) 2686
PpsI GAGTC 4 cut(s) 870, 1392, 1813, 2124
Ppu21I YACGTR 1 cut(s) 2686
PpuMI RGGWCCY 1 cut(s) 1457
PshAI GACNNNNGTC 1 cut(s) 152
Psp5II RGGWCCY 1 cut(s) 1457
Psp6I CCWGG 7 cut(s) 514, 1036, 1961, 2010, 2137, 2491, 2618
PspCI CACGTG 1 cut(s) 2686
PspFI CCCAGC 1 cut(s) 158
PspGI CCWGG 7 cut(s) 514, 1036, 1961, 2010, 2137, 2491, 2618
PspN4I GGNNCC 5 cut(s) 2198, 2219, 2266, 2276, 2598
PspPI GGNCC 5 cut(s) 147, 1457, 1978, 2265, 2555
PspPPI RGGWCCY 1 cut(s) 1457
PsrI GAACNNNNNNTAC 2 cut(s) 196, 228
PsuI RGATCY 4 cut(s) 660, 1182, 1582, 2524
RsaI GTAC 5 cut(s) 480, 606, 1002, 1128, 2109
RsaNI GTAC 5 cut(s) 479, 605, 1001, 1127, 2108
RseI CAYNNNNRTG 2 cut(s) 359, 2605
SalI GTCGAC 1 cut(s) 268
SapI GCTCTTC 1 cut(s) 1812
SaqAI TTAA 9 cut(s) 686, 726, 1208, 1248, 1692, 1757, 1815, 1899, 2636
SatI GCNGC 5 cut(s) 1958, 2183, 2195, 2414, 2498
Sau96I GGNCC 5 cut(s) 147, 1457, 1978, 2265, 2555
SchI GAGTC 4 cut(s) 871, 1393, 1813, 2125
ScrFI CCNGG 9 cut(s) 516, 1038, 1942, 1963, 2012, 2139, 2305, 2493, 2620
SduI GDGCHC 5 cut(s) 250, 1532, 1807, 2019, 2277
SexAI ACCWGGT 3 cut(s) 514, 1036, 2010
SfaNI GCATC 2 cut(s) 616, 1138
SfcI CTRYAG 1 cut(s) 164
SfoI GGCGCC 1 cut(s) 2198
SfuI TTCGAA 3 cut(s) 109, 849, 1371
SinI GGWCC 2 cut(s) 147, 1457
SmiMI CAYNNNNRTG 2 cut(s) 359, 2605
SmlI CTYRAG 4 cut(s) 533, 1055, 1559, 1691
SmoI CTYRAG 4 cut(s) 533, 1055, 1559, 1691
SspDI GGCGCC 1 cut(s) 2196
SspI AATATT 2 cut(s) 920, 1442
SspMI CTAG 3 cut(s) 179, 693, 1215
StyD4I CCNGG 9 cut(s) 514, 1036, 1940, 1961, 2010, 2137, 2303, 2491, 2618
StyI CCWWGG 6 cut(s) 114, 1951, 1974, 1981, 2424, 2600
TaaI ACNGT 7 cut(s) 97, 168, 881, 1403, 1699, 2065, 2710
TaiI ACGT 3 cut(s) 22, 2321, 2688
TatI WGTACW 3 cut(s) 604, 1126, 2107
TauI GCSGC 3 cut(s) 2197, 2416, 2500
TfiI GAWTC 8 cut(s) 5, 430, 952, 1918, 2036, 2134, 2143, 2762
Tru1I TTAA 9 cut(s) 686, 726, 1208, 1248, 1692, 1757, 1815, 1899, 2636
Tru9I TTAA 9 cut(s) 686, 726, 1208, 1248, 1692, 1757, 1815, 1899, 2636
TscAI CASTG 8 cut(s) 361, 413, 784, 916, 935, 1306, 1438, 1485
TseFI GTSAC 1 cut(s) 341
TseI GCWGC 2 cut(s) 1957, 2182
Tsp45I GTSAC 1 cut(s) 341
TspDTI ATGAA 4 cut(s) 62, 281, 729, 1251
TspGWI ACGGA 1 cut(s) 2267
TspRI CASTG 8 cut(s) 361, 413, 784, 916, 935, 1306, 1438, 1485
Van91I CCANNNNNTGG 2 cut(s) 1159, 2409
Vha464I CTTAAG 1 cut(s) 1691
VneI GTGCAC 2 cut(s) 246, 2015
VpaK11BI GGWCC 2 cut(s) 147, 1457
XagI CCTNNNNNAGG 1 cut(s) 1950
XapI RAATTY 7 cut(s) 696, 844, 856, 1218, 1366, 1378, 1854
XceI RCATGY 1 cut(s) 1476
XcmI CCANNNNNNNNNTGG 1 cut(s) 2210
XmiI GTMKAC 3 cut(s) 212, 269, 2312
XspI CTAG 3 cut(s) 179, 693, 1215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.