AT5G44980

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000062
Physical Location & Seq
Forward (+)
18160204 .. 18162264
2061 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G44980.2

Sequence Viewer

Length: 1308 bp
ATGGATCGCGATTATATCAGCGAATTGCCGGATTCTTTACTAACTCAGATACTCTTAGAGCTTCGAACCAAAGATTCTGTTAAGACAAGCGTGTTATCGAAGAGATGGAGAAATCTTTGGTTAAACGTTCCTGGACTCGAATTATTCACCCTTCAATTCACATATCCTGATCGCGAAGAAATCTTTGTAAGGTTTATGGACAGATTTATGGAGTTTAAGTGCAGGTCACGCCTGAAAAAGTTCATGATAACGTATGTCGATTGTAAAGGTTATCGAGATCGATTAATGGAGTTGATCGGTACACTGGTTGATCATGGACTTCAGCATTTGTATGTTTTTATGCATACTTTTGACAGAGTTGATTTCAAACGTCAAAACATTTACAAGAGCAAGACATTGGTCTCTTTGAAGCTTCATAACGTAGAGTTAAAGAATTCAGACTTTGTTGTTTCTCTACCTTGTCTCAAGATCTTGAAACTGGAGAATATTTGTCACGGTGAGGATGGTCCTTTGGTTGTGGAGAAGCTCATCTCAGGATGTTCTGTTCTTGAAGATCTTGAGCTGATTAGGCCTTTTGATATTAGGACACATAAAGTTCTTCTGCTTCTGCGTGTGAGCTCTCAGACTCTGAAAAGCTTTACCTTACATTTTGCGATCTATAAGGATCGTACAGATTTTTCAGTTGAGATTGATGCTCCAAGACTCAAGTATATGACTGTTGAACAGAGTCAATCTGATAGCATTGTGGTAAAGAACCTGAGTTCCTTGTTCAGCATCGACATTGGTACTAAATTTAATCCTTTGAGACATGAGGATCTAAGGATGCGTAATGTTTTCTACGATTTTTTAACCGGGATATCTAGTGTAAAACATATGATCATCTGTTTGTGGAGTCTCCAGAGGTTTTCTCCTTATTCAAAACCCGGACTGATTCCCAAATTCCAGAACTTGTATCATTTAAAAGCACAGATGTGGAGCTCATCAACACACTTATTGGAAGCGTTTCTTGAGAGCTGCCCAAATCTGAAAAACCTCATCTTGGAATATAATGTTGAATTGGATCGAGAGCAAGTGGACTTTACCAACGTGCCTCAATGTTTAATATCGACGCTGGAGTATGTTGAGATTAAAGAACCGAATGAGAAAAGTACGATTAAACTAGTGAACTACTTTCTTGAGAATTCAGCAGTCCTCAAGAAACTTACTCTACGTTTCTCATATTCATCTTCTATCTACCTAAAGAGCTACAAGAAGCTTCTTACATCAACAAAGCTTTCTCCCACATGTCAAGTTATCTTTGGTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

435

Amino Acids

50.99

Weight (kDa)

8.88

Isoelectric Point (pI)

38.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 6 - 43 2.9e-07 F-box domain
LRR_At5g56370 PF24758 98 - 242 9.9e-09 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 361 - 403 4.6e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 213
AccII CGCG 2 cut(s) 9, 174
AclI AACGTT 1 cut(s) 126
AclWI GGATC 4 cut(s) 12, 672, 822, 1068
AcsI RAATTY 4 cut(s) 433, 791, 938, 1180
AcuI CTGAAG 1 cut(s) 305
AfaI GTAC 4 cut(s) 301, 670, 787, 1150
AfiI CCNNNNNNNGG 1 cut(s) 1039
AflIII ACRYGT 1 cut(s) 1283
AgsI TTSAA 8 cut(s) 155, 367, 409, 475, 551, 722, 918, 1055
AhlI ACTAGT 1 cut(s) 1159
AjnI CCWGG 1 cut(s) 130
AleI CACNNNNGTG 1 cut(s) 970
AloI GAACNNNNNNTCC 4 cut(s) 528, 560, 746, 778
Alw21I GWGCWC 2 cut(s) 620, 980
Alw26I GTCTC 4 cut(s) 406, 467, 799, 899
AlwI GGATC 4 cut(s) 12, 672, 822, 1068
AlwNI CAGNNNCTG 1 cut(s) 628
AoxI GGCC 1 cut(s) 569
ApeKI GCWGC 1 cut(s) 1014
ApoI RAATTY 4 cut(s) 433, 791, 938, 1180
AseI ATTAAT 1 cut(s) 284
Asp700I GAANNNNTTC 2 cut(s) 239, 1002
AspS9I GGNCC 1 cut(s) 506
AsuC2I CCSGG 2 cut(s) 853, 924
AsuHPI GGTGA 2 cut(s) 139, 509
AsuII TTCGAA 1 cut(s) 64
AvaII GGWCC 1 cut(s) 506
BaeI ACNNNNGTAYC 2 cut(s) 291, 324
BanII GRGCYC 2 cut(s) 620, 980
Bbv12I GWGCWC 2 cut(s) 620, 980
BbvI GCAGC 1 cut(s) 1001
BccI CCATC 2 cut(s) 99, 497
BciT130I CCWGG 1 cut(s) 132
BclI TGATCA 2 cut(s) 310, 876
BcnI CCSGG 2 cut(s) 853, 924
BcoDI GTCTC 4 cut(s) 406, 467, 799, 899
BcuI ACTAGT 1 cut(s) 1159
BfaI CTAG 2 cut(s) 861, 1160
BfuAI ACCTGC 1 cut(s) 213
BglII AGATCT 2 cut(s) 468, 553
BisI GCNGC 1 cut(s) 1015
BlsI GCNGC 1 cut(s) 1016
Bme1390I CCNGG 3 cut(s) 132, 853, 924
Bme18I GGWCC 1 cut(s) 506
BmgT120I GGNCC 1 cut(s) 506
BmrFI CCNGG 3 cut(s) 132, 853, 924
BmsI GCATC 3 cut(s) 682, 783, 813
BoxI GACNNNNGTC 1 cut(s) 398
BplI GAGNNNNNCTC 2 cut(s) 892, 924
BpmI CTGGAG 3 cut(s) 500, 881, 1133
Bpu14I TTCGAA 1 cut(s) 64
BpuEI CTTGAG 6 cut(s) 449, 578, 689, 1028, 1178, 1196
BpuMI CCSGG 2 cut(s) 853, 924
Bsa29I ATCGAT 1 cut(s) 280
BsaI GGTCTC 1 cut(s) 406
BsaXI ACNNNNNCTCC 2 cut(s) 203, 233
Bsc4I CCNNNNNNNGG 1 cut(s) 1039
Bse1I ACTGG 2 cut(s) 309, 483
BseBI CCWGG 1 cut(s) 132
BseCI ATCGAT 1 cut(s) 280
BseGI GGATG 3 cut(s) 508, 542, 828
BseLI CCNNNNNNNGG 1 cut(s) 1039
BseMII CTCAG 4 cut(s) 59, 546, 635, 749
BseNI ACTGG 2 cut(s) 309, 483
BseXI GCAGC 1 cut(s) 1001
BsgI GTGCAG 1 cut(s) 241
Bsh1236I CGCG 2 cut(s) 9, 174
BshFI GGCC 1 cut(s) 571
BshVI ATCGAT 1 cut(s) 280
BsiHKAI GWGCWC 2 cut(s) 620, 980
BsiSI CCGG 3 cut(s) 29, 852, 924
BslI CCNNNNNNNGG 1 cut(s) 1039
BsmAI GTCTC 4 cut(s) 406, 467, 799, 899
BsnI GGCC 1 cut(s) 571
Bso31I GGTCTC 1 cut(s) 406
Bsp119I TTCGAA 1 cut(s) 64
Bsp1286I GDGCHC 2 cut(s) 620, 980
Bsp68I TCGCGA 2 cut(s) 9, 174
BspANI GGCC 1 cut(s) 571
BspCNI CTCAG 4 cut(s) 58, 545, 634, 750
BspDI ATCGAT 1 cut(s) 280
BspFNI CGCG 2 cut(s) 9, 174
BspHI TCATGA 1 cut(s) 243
BspMI ACCTGC 1 cut(s) 213
BspPI GGATC 4 cut(s) 12, 672, 822, 1068
BspT104I TTCGAA 1 cut(s) 64
BspTNI GGTCTC 1 cut(s) 406
BsrI ACTGG 2 cut(s) 309, 483
Bst2UI CCWGG 1 cut(s) 132
Bst4CI ACNGT 2 cut(s) 497, 718
Bst6I CTCTTC 1 cut(s) 95
BstBI TTCGAA 1 cut(s) 64
BstDEI CTNAG 6 cut(s) 45, 55, 532, 621, 758, 818
BstF5I GGATG 3 cut(s) 508, 542, 828
BstFNI CGCG 2 cut(s) 9, 174
BstMAI GTCTC 4 cut(s) 406, 467, 799, 899
BstMWI GCNNNNNNNGC 2 cut(s) 228, 568
BstNI CCWGG 1 cut(s) 132
BstNSI RCATGY 1 cut(s) 1287
BstPAI GACNNNNGTC 1 cut(s) 398
BstSCI CCNGG 3 cut(s) 130, 851, 922
BstUI CGCG 2 cut(s) 9, 174
BstV1I GCAGC 1 cut(s) 1001
BstX2I RGATCY 3 cut(s) 468, 553, 814
BstYI RGATCY 3 cut(s) 468, 553, 814
Bsu15I ATCGAT 1 cut(s) 280
BsuRI GGCC 1 cut(s) 571
BsuTUI ATCGAT 1 cut(s) 280
BtsCI GGATG 3 cut(s) 508, 542, 828
BtsIMutI CAGTG 1 cut(s) 302
BtuMI TCGCGA 2 cut(s) 9, 174
BveI ACCTGC 1 cut(s) 213
CaiI CAGNNNCTG 1 cut(s) 628
CciI TCATGA 1 cut(s) 243
Cfr13I GGNCC 1 cut(s) 506
ClaI ATCGAT 1 cut(s) 280
CseI GACGC 1 cut(s) 1117
Csp6I GTAC 4 cut(s) 300, 669, 786, 1149
CviAII CATG 4 cut(s) 244, 314, 809, 1284
CviQI GTAC 4 cut(s) 300, 669, 786, 1149
DdeI CTNAG 6 cut(s) 45, 55, 532, 621, 758, 818
DraI TTTAAA 1 cut(s) 960
Eam1104I CTCTTC 1 cut(s) 95
EarI CTCTTC 1 cut(s) 95
Ecl136II GAGCTC 2 cut(s) 618, 978
Eco147I AGGCCT 1 cut(s) 571
Eco24I GRGCYC 2 cut(s) 620, 980
Eco31I GGTCTC 1 cut(s) 406
Eco32I GATATC 1 cut(s) 858
Eco47I GGWCC 1 cut(s) 506
Eco53kI GAGCTC 2 cut(s) 618, 978
Eco57I CTGAAG 1 cut(s) 305
EcoICRI GAGCTC 2 cut(s) 618, 978
EcoRI GAATTC 2 cut(s) 433, 1180
EcoRII CCWGG 1 cut(s) 130
EcoRV GATATC 1 cut(s) 858
EcoT22I ATGCAT 1 cut(s) 345
EcoT38I GRGCYC 2 cut(s) 620, 980
FaeI CATG 4 cut(s) 247, 317, 812, 1287
FalI AAGNNNNNCTT 2 cut(s) 990, 1022
FatI CATG 4 cut(s) 243, 313, 808, 1283
FauNDI CATATG 1 cut(s) 873
FbaI TGATCA 2 cut(s) 310, 876
Fnu4HI GCNGC 1 cut(s) 1015
FokI GGATG 3 cut(s) 515, 549, 835
FriOI GRGCYC 2 cut(s) 620, 980
Fsp4HI GCNGC 1 cut(s) 1015
FspBI CTAG 2 cut(s) 861, 1160
GluI GCNGC 1 cut(s) 1015
GsuI CTGGAG 3 cut(s) 500, 881, 1133
HaeIII GGCC 1 cut(s) 571
HapII CCGG 3 cut(s) 29, 852, 924
HgaI GACGC 1 cut(s) 1117
Hin1II CATG 4 cut(s) 247, 317, 812, 1287
HindIII AAGCTT 4 cut(s) 410, 634, 1253, 1271
HinfI GANTC 8 cut(s) 32, 74, 135, 625, 702, 727, 892, 931
HpaII CCGG 3 cut(s) 29, 852, 924
HphI GGTGA 2 cut(s) 139, 509
Hpy166II GTNNAC 3 cut(s) 302, 1075, 1165
Hpy188I TCNGA 6 cut(s) 48, 439, 624, 630, 736, 1026
Hpy8I GTNNAC 3 cut(s) 302, 1075, 1165
Hpy99I CGWCG 1 cut(s) 1111
HpyAV CCTTC 1 cut(s) 161
HpyCH4III ACNGT 2 cut(s) 497, 718
HpyCH4IV ACGT 6 cut(s) 126, 251, 370, 420, 1086, 1210
HpyCH4V TGCA 2 cut(s) 222, 343
HpyF10VI GCNNNNNNNGC 2 cut(s) 228, 568
HpyF3I CTNAG 6 cut(s) 45, 55, 532, 621, 758, 818
HpySE526I ACGT 6 cut(s) 126, 251, 370, 420, 1086, 1210
Hsp92II CATG 4 cut(s) 247, 317, 812, 1287
Ksp22I TGATCA 2 cut(s) 310, 876
LmnI GCTCC 2 cut(s) 700, 975
Lsp1109I GCAGC 1 cut(s) 1001
LweI GCATC 3 cut(s) 682, 783, 813
MaeI CTAG 2 cut(s) 861, 1160
MaeII ACGT 6 cut(s) 126, 251, 370, 420, 1086, 1210
MaeIII GTNAC 2 cut(s) 225, 491
MboII GAAGA 5 cut(s) 112, 188, 563, 590, 1218
MflI RGATCY 3 cut(s) 468, 553, 814
MhlI GDGCHC 2 cut(s) 620, 980
MluCI AATT 8 cut(s) 23, 140, 155, 433, 791, 938, 1055, 1180
MlyI GAGTC 5 cut(s) 129, 619, 696, 736, 901
MnlI CCTC 6 cut(s) 493, 805, 894, 1043, 1101, 1202
Mph1103I ATGCAT 1 cut(s) 345
MroXI GAANNNNTTC 2 cut(s) 239, 1002
MslI CAYNNNNRTG 2 cut(s) 330, 970
MspI CCGG 3 cut(s) 29, 852, 924
MspR9I CCNGG 3 cut(s) 132, 853, 924
MvaI CCWGG 1 cut(s) 132
MvnI CGCG 2 cut(s) 9, 174
MwoI GCNNNNNNNGC 2 cut(s) 228, 568
NciI CCSGG 2 cut(s) 853, 924
NdeI CATATG 1 cut(s) 873
NlaIII CATG 4 cut(s) 247, 317, 812, 1287
NmuCI GTSAC 2 cut(s) 225, 491
NruI TCGCGA 2 cut(s) 9, 174
NsiI ATGCAT 1 cut(s) 345
NspI RCATGY 1 cut(s) 1287
NspV TTCGAA 1 cut(s) 64
OliI CACNNNNGTG 1 cut(s) 970
PagI TCATGA 1 cut(s) 243
PceI AGGCCT 1 cut(s) 571
PciI ACATGT 1 cut(s) 1283
PdmI GAANNNNTTC 2 cut(s) 239, 1002
PfeI GAWTC 3 cut(s) 32, 74, 931
PfoI TCCNGGA 1 cut(s) 130
PkrI GCNGC 1 cut(s) 1016
PleI GAGTC 5 cut(s) 129, 619, 696, 735, 900
PpsI GAGTC 5 cut(s) 129, 619, 696, 735, 900
PscI ACATGT 1 cut(s) 1283
PshAI GACNNNNGTC 1 cut(s) 398
PshBI ATTAAT 1 cut(s) 284
Psp124BI GAGCTC 2 cut(s) 620, 980
Psp1406I AACGTT 1 cut(s) 126
Psp6I CCWGG 1 cut(s) 130
PspGI CCWGG 1 cut(s) 130
PspPI GGNCC 1 cut(s) 506
PstNI CAGNNNCTG 1 cut(s) 628
PsuI RGATCY 3 cut(s) 468, 553, 814
RruI TCGCGA 2 cut(s) 9, 174
RsaI GTAC 4 cut(s) 301, 670, 787, 1150
RsaNI GTAC 4 cut(s) 300, 669, 786, 1149
RseI CAYNNNNRTG 2 cut(s) 330, 970
SacI GAGCTC 2 cut(s) 620, 980
SatI GCNGC 1 cut(s) 1015
Sau96I GGNCC 1 cut(s) 506
SchI GAGTC 5 cut(s) 129, 619, 696, 736, 901
ScrFI CCNGG 3 cut(s) 132, 853, 924
SduI GDGCHC 2 cut(s) 620, 980
SfaNI GCATC 3 cut(s) 682, 783, 813
SfuI TTCGAA 1 cut(s) 64
SinI GGWCC 1 cut(s) 506
SmiMI CAYNNNNRTG 2 cut(s) 330, 970
SmlI CTYRAG 6 cut(s) 464, 557, 704, 1007, 1175, 1193
SmoI CTYRAG 6 cut(s) 464, 557, 704, 1007, 1175, 1193
SpeI ACTAGT 1 cut(s) 1159
Sse9I AATT 8 cut(s) 23, 140, 155, 433, 791, 938, 1055, 1180
SseBI AGGCCT 1 cut(s) 571
SspI AATATT 1 cut(s) 487
SspMI CTAG 2 cut(s) 861, 1160
SstI GAGCTC 2 cut(s) 620, 980
StuI AGGCCT 1 cut(s) 571
StyD4I CCNGG 3 cut(s) 130, 851, 922
TaaI ACNGT 2 cut(s) 497, 718
TaiI ACGT 6 cut(s) 129, 254, 373, 423, 1089, 1213
TaqI TCGA 9 cut(s) 64, 98, 138, 258, 274, 280, 777, 1063, 1106
TasI AATT 8 cut(s) 23, 140, 155, 433, 791, 938, 1055, 1180
TfiI GAWTC 3 cut(s) 32, 74, 931
TscAI CASTG 1 cut(s) 309
TseFI GTSAC 2 cut(s) 225, 491
TseI GCWGC 1 cut(s) 1014
Tsp45I GTSAC 2 cut(s) 225, 491
TspDTI ATGAA 3 cut(s) 232, 404, 1212
TspRI CASTG 1 cut(s) 309
VpaK11BI GGWCC 1 cut(s) 506
VspI ATTAAT 1 cut(s) 284
XapI RAATTY 4 cut(s) 433, 791, 938, 1180
XceI RCATGY 1 cut(s) 1287
XmnI GAANNNNTTC 2 cut(s) 239, 1002
XspI CTAG 2 cut(s) 861, 1160
Zsp2I ATGCAT 1 cut(s) 345
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.