AT3G23955

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000062
Physical Location & Seq
Reverse (-)
8655023 .. 8657439
2417 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G23955.1

Sequence Viewer

Length: 1206 bp
ATGGATCATGAAGATGTTACCAGGAGAGCCGTCGAAAAGAAGAACAAGCTAGCTTCGTCGTTAATACATGCACCATTTGCCATTTGTGGGCTTTGTTGGGCTTTTGTGTATCAGAAGCTCATTTATAAACAAACATACACTGATACACACGCGAGAAACTACAAGGTTCCAGCAAGGTTCCAGTTACCAGATCCTTTGTTAACTCAGATTCTTAATCATCTTCCCACAGAGGAAGCTGTGAAGACAAGCGTTTTATCCACCAGATGGAGAACTCTCTGGCTTTGGGTTCATAATTTGGAATTGTCATTTTCGAAGTTCTCAAGTTTCAATGCCTTTTTGAGTTTTGGTAACTGGTTTTTCGATTCCGATAGAGTTTCATGCATAGAGAGCCTCAAGTTATCTTTAGATGGAAATGATGCATCCTATCTCAAACCATGGATTGATGCCTTTGTTAAGCGTAAGATCCAACGTCTACATGTTCGTCTTACTCAAGGGTGTGAGATGCCACTAAGCCTTTACAGACTTGTCTCGTCCTGCCCTGTCCTGGAGGAGTTAAAGATTGATGTAGTATGGATGGATGGACGAGTCTATCGGGTGCACTCTCGGTCACTGAAGAGCTTTATACTAACTGATTTGGAGTCCGATGCCAAGTTCGATATTTCTCTCCGTTTTCATAAGTGGGTCTTTAACGAAGCAAAAACAAGTACCATCCACATGTTTCTCGCTTGGATTTCGAGGGTCAGAGATATGACGATATGTGCACAAACTTTCAAGCTCATCCATCATTACTCAGAATCTGTTCAGCTACCTCAATTCGGTTACATGTCCAGTCTATACATTACTCTCAATGCATCAGATTTGAAATGGTTTCCAATCTTTCTTAGGAGTATCCCGAATCTGAAATCCCTCATCTTAGTGATGGAACGGACTGGTTCTTCCCATCAACTGTCTCCCAAGGCGATCAAACGAGTTAGTATTTCATCTGTGCCTGAGTGTTTGCTATCGTCCCTCGAGTTTGTTGAATTCAAAGCCCCAATTTGTGGACTTGCTCCAGAGATGATGCTAGTATGGTACTTCCTAGAGAACTCTCCCACACTCAAGAAACTCACTCTACGTTTGAAGTCTCATTCAACAAAAGATGACTTTGTCAAGAAACTCCTCAAAATCCCAAGATGCTCTACAGAATGTGAAGTCATCTTTCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

401

Amino Acids

46.62

Weight (kDa)

9.27

Isoelectric Point (pI)

45.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 61 - 98 1.4e-07 F-box domain
FBD PF08387 327 - 371 5.5e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 126
AccB7I CCANNNNNTGG 2 cut(s) 264, 1040
AccI GTMKAC 1 cut(s) 472
AccII CGCG 1 cut(s) 152
AclWI GGATC 3 cut(s) 12, 185, 457
AcsI RAATTY 1 cut(s) 1022
AcuI CTGAAG 1 cut(s) 632
AfaI GTAC 2 cut(s) 706, 1073
AfiI CCNNNNNNNGG 5 cut(s) 87, 264, 544, 815, 1040
AflIII ACRYGT 3 cut(s) 475, 714, 822
AgsI TTSAA 7 cut(s) 328, 772, 862, 1022, 1027, 1120, 1131
AjnI CCWGG 2 cut(s) 20, 543
AluBI AGCT 7 cut(s) 49, 53, 118, 236, 618, 775, 805
AluI AGCT 7 cut(s) 49, 53, 118, 236, 618, 775, 805
Alw21I GWGCWC 2 cut(s) 600, 763
Alw26I GTCTC 3 cut(s) 532, 954, 1128
Alw44I GTGCAC 2 cut(s) 596, 759
AlwI GGATC 3 cut(s) 12, 185, 457
AlwNI CAGNNNCTG 1 cut(s) 797
Ama87I CYCGRG 1 cut(s) 1010
ApaLI GTGCAC 2 cut(s) 596, 759
ApoI RAATTY 1 cut(s) 1022
Asp700I GAANNNNTTC 1 cut(s) 798
AsuII TTCGAA 1 cut(s) 311
AsuNHI GCTAGC 1 cut(s) 49
AvaI CYCGRG 1 cut(s) 1010
BaeGI GKGCMC 2 cut(s) 600, 763
BbsI GAAGAC 1 cut(s) 248
Bbv12I GWGCWC 2 cut(s) 600, 763
BccI CCATC 8 cut(s) 258, 401, 568, 572, 716, 789, 913, 948
BceAI ACGGC 1 cut(s) 14
BciT130I CCWGG 2 cut(s) 22, 545
BciVI GTATCC 1 cut(s) 899
BcoDI GTCTC 3 cut(s) 532, 954, 1128
BfaI CTAG 3 cut(s) 50, 1064, 1079
BfmI CTRYAG 1 cut(s) 1179
BfuI GTATCC 1 cut(s) 899
Bme1390I CCNGG 2 cut(s) 22, 545
BmeT110I CYCGRG 1 cut(s) 1010
BmiI GGNNCC 2 cut(s) 168, 179
BmrFI CCNGG 2 cut(s) 22, 545
BmsI GCATC 8 cut(s) 406, 428, 433, 492, 634, 860, 1050, 1163
BmtI GCTAGC 1 cut(s) 53
BpiI GAAGAC 1 cut(s) 248
BpmI CTGGAG 2 cut(s) 566, 1035
Bpu14I TTCGAA 1 cut(s) 311
BpuEI CTTGAG 4 cut(s) 304, 377, 474, 1082
BsaJI CCNNGG 2 cut(s) 434, 954
Bsc4I CCNNNNNNNGG 5 cut(s) 87, 264, 544, 815, 1040
Bse1I ACTGG 4 cut(s) 181, 356, 828, 934
BseBI CCWGG 2 cut(s) 22, 545
BseDI CCNNGG 2 cut(s) 434, 954
BseGI GGATG 5 cut(s) 419, 579, 583, 708, 777
BseLI CCNNNNNNNGG 5 cut(s) 87, 264, 544, 815, 1040
BseMII CTCAG 3 cut(s) 218, 804, 981
BseNI ACTGG 4 cut(s) 181, 356, 828, 934
BseRI GAGGAG 2 cut(s) 563, 1148
BseSI GKGCMC 2 cut(s) 600, 763
Bsh1236I CGCG 1 cut(s) 152
BsiHKAI GWGCWC 2 cut(s) 600, 763
BsiHKCI CYCGRG 1 cut(s) 1010
BslFI GGGAC 1 cut(s) 991
BslI CCNNNNNNNGG 5 cut(s) 87, 264, 544, 815, 1040
BsmAI GTCTC 3 cut(s) 532, 954, 1128
BsmFI GGGAC 1 cut(s) 991
BsoBI CYCGRG 1 cut(s) 1010
Bsp119I TTCGAA 1 cut(s) 311
Bsp1286I GDGCHC 2 cut(s) 600, 763
Bsp143I GATC 4 cut(s) 4, 190, 462, 960
Bsp19I CCATGG 1 cut(s) 434
BspCNI CTCAG 3 cut(s) 217, 803, 982
BspFNI CGCG 1 cut(s) 152
BspHI TCATGA 1 cut(s) 7
BspLI GGNNCC 2 cut(s) 168, 179
BspOI GCTAGC 1 cut(s) 53
BspPI GGATC 3 cut(s) 12, 185, 457
BspQI GCTCTTC 1 cut(s) 608
BspT104I TTCGAA 1 cut(s) 311
BsrI ACTGG 4 cut(s) 181, 356, 828, 934
BssECI CCNNGG 2 cut(s) 434, 954
BssMI GATC 4 cut(s) 4, 190, 462, 960
BssT1I CCWWGG 2 cut(s) 434, 954
Bst2UI CCWGG 2 cut(s) 22, 545
Bst4CI ACNGT 1 cut(s) 948
Bst6I CTCTTC 1 cut(s) 608
BstAPI GCANNNNNTGC 1 cut(s) 77
BstBI TTCGAA 1 cut(s) 311
BstC8I GCNNGC 1 cut(s) 51
BstDEI CTNAG 6 cut(s) 204, 509, 790, 881, 913, 990
BstDSI CCRYGG 1 cut(s) 434
BstF5I GGATG 5 cut(s) 419, 579, 583, 708, 777
BstFNI CGCG 1 cut(s) 152
BstKTI GATC 4 cut(s) 7, 193, 465, 963
BstMAI GTCTC 3 cut(s) 532, 954, 1128
BstMBI GATC 4 cut(s) 4, 190, 462, 960
BstMWI GCNNNNNNNGC 2 cut(s) 77, 387
BstNI CCWGG 2 cut(s) 22, 545
BstNSI RCATGY 4 cut(s) 71, 479, 718, 826
BstSCI CCNGG 2 cut(s) 20, 543
BstSFI CTRYAG 1 cut(s) 1179
BstSLI GKGCMC 2 cut(s) 600, 763
BstUI CGCG 1 cut(s) 152
BstV2I GAAGAC 1 cut(s) 248
BstX2I RGATCY 2 cut(s) 190, 462
BstYI RGATCY 2 cut(s) 190, 462
BsuI GTATCC 1 cut(s) 899
BtgI CCRYGG 1 cut(s) 434
BtsCI GGATG 5 cut(s) 419, 579, 583, 708, 777
BtsIMutI CAGTG 2 cut(s) 138, 608
Cac8I GCNNGC 1 cut(s) 51
CaiI CAGNNNCTG 1 cut(s) 797
CciI TCATGA 1 cut(s) 7
Csp6I GTAC 2 cut(s) 705, 1072
CviAII CATG 7 cut(s) 8, 68, 378, 435, 476, 715, 823
CviQI GTAC 2 cut(s) 705, 1072
DdeI CTNAG 6 cut(s) 204, 509, 790, 881, 913, 990
DpnI GATC 4 cut(s) 6, 192, 464, 962
DpnII GATC 4 cut(s) 4, 190, 462, 960
Eam1104I CTCTTC 1 cut(s) 608
EarI CTCTTC 1 cut(s) 608
Eco130I CCWWGG 2 cut(s) 434, 954
Eco57I CTGAAG 1 cut(s) 632
Eco88I CYCGRG 1 cut(s) 1010
EcoRI GAATTC 1 cut(s) 1022
EcoRII CCWGG 2 cut(s) 20, 543
EcoT14I CCWWGG 2 cut(s) 434, 954
EcoT22I ATGCAT 3 cut(s) 383, 421, 853
ErhI CCWWGG 2 cut(s) 434, 954
FaeI CATG 7 cut(s) 11, 71, 381, 438, 479, 718, 826
FalI AAGNNNNNCTT 2 cut(s) 668, 700
FaqI GGGAC 1 cut(s) 991
FatI CATG 7 cut(s) 7, 67, 377, 434, 475, 714, 822
FblI GTMKAC 1 cut(s) 472
FokI GGATG 5 cut(s) 406, 586, 590, 695, 764
FspBI CTAG 3 cut(s) 50, 1064, 1079
GsuI CTGGAG 2 cut(s) 566, 1035
Hin1II CATG 7 cut(s) 11, 71, 381, 438, 479, 718, 826
HincII GTYRAC 1 cut(s) 201
HindII GTYRAC 1 cut(s) 201
HinfI GANTC 6 cut(s) 208, 362, 585, 638, 794, 895
HpaI GTTAAC 1 cut(s) 201
Hpy166II GTNNAC 5 cut(s) 201, 473, 598, 761, 1043
Hpy188I TCNGA 8 cut(s) 114, 207, 367, 643, 743, 793, 856, 900
Hpy188III TCNNGA 5 cut(s) 8, 892, 1052, 1099, 1150
Hpy8I GTNNAC 5 cut(s) 201, 473, 598, 761, 1043
Hpy99I CGWCG 2 cut(s) 35, 61
HpyCH4III ACNGT 1 cut(s) 948
HpyCH4IV ACGT 2 cut(s) 469, 1114
HpyCH4V TGCA 6 cut(s) 71, 381, 419, 598, 761, 851
HpyF10VI GCNNNNNNNGC 2 cut(s) 77, 387
HpyF3I CTNAG 6 cut(s) 204, 509, 790, 881, 913, 990
HpySE526I ACGT 2 cut(s) 469, 1114
Hsp92II CATG 7 cut(s) 11, 71, 381, 438, 479, 718, 826
KspAI GTTAAC 1 cut(s) 201
Kzo9I GATC 4 cut(s) 4, 190, 462, 960
LguI GCTCTTC 1 cut(s) 608
LmnI GCTCC 1 cut(s) 1054
LweI GCATC 8 cut(s) 406, 428, 433, 492, 634, 860, 1050, 1163
MaeI CTAG 3 cut(s) 50, 1064, 1079
MaeII ACGT 2 cut(s) 469, 1114
MaeIII GTNAC 5 cut(s) 16, 183, 347, 606, 818
MalI GATC 4 cut(s) 6, 192, 464, 962
MboI GATC 4 cut(s) 4, 190, 462, 960
MboII GAAGA 6 cut(s) 23, 52, 212, 253, 625, 927
MflI RGATCY 2 cut(s) 190, 462
MhlI GDGCHC 2 cut(s) 600, 763
MluCI AATT 5 cut(s) 292, 299, 812, 1022, 1035
MlyI GAGTC 2 cut(s) 594, 647
MmeI TCCRAC 1 cut(s) 490
MnlI CCTC 8 cut(s) 223, 401, 541, 729, 819, 917, 1019, 1169
Mph1103I ATGCAT 3 cut(s) 383, 421, 853
MroXI GAANNNNTTC 1 cut(s) 798
MseI TTAA 6 cut(s) 62, 200, 213, 453, 554, 687
MslI CAYNNNNRTG 3 cut(s) 12, 713, 914
MspR9I CCNGG 2 cut(s) 22, 545
MvaI CCWGG 2 cut(s) 22, 545
MvnI CGCG 1 cut(s) 152
MwoI GCNNNNNNNGC 2 cut(s) 77, 387
NcoI CCATGG 1 cut(s) 434
NdeII GATC 4 cut(s) 4, 190, 462, 960
NheI GCTAGC 1 cut(s) 49
NlaIII CATG 7 cut(s) 11, 71, 381, 438, 479, 718, 826
NlaIV GGNNCC 2 cut(s) 168, 179
NmuCI GTSAC 1 cut(s) 606
NsiI ATGCAT 3 cut(s) 383, 421, 853
NspI RCATGY 4 cut(s) 71, 479, 718, 826
NspV TTCGAA 1 cut(s) 311
PaeR7I CTCGAG 1 cut(s) 1010
PagI TCATGA 1 cut(s) 7
PciI ACATGT 3 cut(s) 475, 714, 822
PciSI GCTCTTC 1 cut(s) 608
PdmI GAANNNNTTC 1 cut(s) 798
PfeI GAWTC 4 cut(s) 208, 362, 794, 895
PflFI GACNNNGTC 1 cut(s) 1145
PflMI CCANNNNNTGG 2 cut(s) 264, 1040
PfoI TCCNGGA 1 cut(s) 543
PleI GAGTC 2 cut(s) 593, 646
PpsI GAGTC 2 cut(s) 593, 646
PscI ACATGT 3 cut(s) 475, 714, 822
PsiI TTATAA 1 cut(s) 126
Psp6I CCWGG 2 cut(s) 20, 543
PspGI CCWGG 2 cut(s) 20, 543
PspN4I GGNNCC 2 cut(s) 168, 179
PspXI VCTCGAGB 1 cut(s) 1010
PstNI CAGNNNCTG 1 cut(s) 797
PsuI RGATCY 2 cut(s) 190, 462
PsyI GACNNNGTC 1 cut(s) 1145
RsaI GTAC 2 cut(s) 706, 1073
RsaNI GTAC 2 cut(s) 705, 1072
RseI CAYNNNNRTG 3 cut(s) 12, 713, 914
SapI GCTCTTC 1 cut(s) 608
SaqAI TTAA 6 cut(s) 62, 200, 213, 453, 554, 687
Sau3AI GATC 4 cut(s) 4, 190, 462, 960
SchI GAGTC 2 cut(s) 594, 647
ScrFI CCNGG 2 cut(s) 22, 545
SduI GDGCHC 2 cut(s) 600, 763
SfaNI GCATC 8 cut(s) 406, 428, 433, 492, 634, 860, 1050, 1163
SfcI CTRYAG 1 cut(s) 1179
Sfr274I CTCGAG 1 cut(s) 1010
SfuI TTCGAA 1 cut(s) 311
SlaI CTCGAG 1 cut(s) 1010
SmiMI CAYNNNNRTG 3 cut(s) 12, 713, 914
SmlI CTYRAG 5 cut(s) 319, 392, 489, 1010, 1097
SmoI CTYRAG 5 cut(s) 319, 392, 489, 1010, 1097
Sse9I AATT 5 cut(s) 292, 299, 812, 1022, 1035
SspMI CTAG 3 cut(s) 50, 1064, 1079
StyD4I CCNGG 2 cut(s) 20, 543
StyI CCWWGG 2 cut(s) 434, 954
TaaI ACNGT 1 cut(s) 948
TaiI ACGT 2 cut(s) 472, 1117
TaqI TCGA 6 cut(s) 33, 311, 360, 654, 734, 1011
TaqII GACCGA 1 cut(s) 594
TasI AATT 5 cut(s) 292, 299, 812, 1022, 1035
TfiI GAWTC 4 cut(s) 208, 362, 794, 895
Tru1I TTAA 6 cut(s) 62, 200, 213, 453, 554, 687
Tru9I TTAA 6 cut(s) 62, 200, 213, 453, 554, 687
TscAI CASTG 2 cut(s) 145, 615
TseFI GTSAC 1 cut(s) 606
Tsp45I GTSAC 1 cut(s) 606
TspDTI ATGAA 5 cut(s) 24, 278, 366, 662, 969
TspGWI ACGGA 2 cut(s) 656, 940
TspRI CASTG 2 cut(s) 145, 615
Tth111I GACNNNGTC 1 cut(s) 1145
Van91I CCANNNNNTGG 2 cut(s) 264, 1040
VneI GTGCAC 2 cut(s) 596, 759
XapI RAATTY 1 cut(s) 1022
XceI RCATGY 4 cut(s) 71, 479, 718, 826
XhoI CTCGAG 1 cut(s) 1010
XmiI GTMKAC 1 cut(s) 472
XmnI GAANNNNTTC 1 cut(s) 798
XspI CTAG 3 cut(s) 50, 1064, 1079
Zsp2I ATGCAT 3 cut(s) 383, 421, 853
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.