RchiOBHm_Chr5g0028391

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000062
Physical Location & Seq
Forward (+)
22245473 .. 22248098
2626 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30783

Sequence Viewer

Length: 1398 bp
ATGGATTCTCAATCAAAGCTTGAAGAAAGAGTTAGAGATAGGATAAGTGAATTGCCAGATCTTGTTCTTATTCATATAGTTTCGTTTCTTGAAACGAAATATGCTGTGAGGACCAGCATTTTGTCCACACGATGGAAGGGTATATGGGCCTTTAGTCCCAATCTGGACTTCCGCGATAGATTTACGAAGAACAAAGCTGGTTTTGTGGATTTTGTTGATAGGGTACTTATCTTCCGTGACACGGATATTCAAAAGTTTCGTCTCGAATGTTCCAATGTTGGGGATTTCTCTCATATTTATAGCTGGATTCGTACTGCAGTTAGGCAAAACGTTGTTGAAGTTGATCTTAATTTTGGATCCAACAGAGACCAGGTTTATGAGTTGCCAGACAGCCTTTTTATGTGTAAATCACTGGAGGTGTTGAAGGTGGTATCGGGATGTATTACTTTTGATCCTCCATCACAGAGGTTTCCCAGTCTCAAGGTCCTCGATGCTTGTCTTTATCATCCTAACAATGACTCAATGGAGAAGCTTTTCTCTTGCTGCCCTGCACTAGAATATTTGTCTATAAGGGCAACTATTGGAGATGAGGTTTTGAATTTCAAAGTGTCTGCACCTGAACTGAAGACATTTAAGGTAGATTTGTTCAATGCGTATAAAGATGAAAATGAATATCACAGCGAAGATGAAGATGAAGCTCCTGAATGCATTGATGTCTACAACTTCTTCATTAATGCCCCAAAGCTTGAAACCATTGATATCCATACCGATATCTTGTCAAATTTTTTCTTTGAAAATGCAGCATCACTAATGAAAGCCAATATTAATCTCACTGTCCATGATTCAAGTGAACGGCGTACCTTTGCTAATTGTGCAACTGCACTTCTGGCAGCAGTTTCCAATGTCAAGGATTTGTCTCTTTCAGCTCATTGTTTCAAGGCTTGTTATCTCCCCGCTTTTGGTAACTTAAGCAAATTGAAGCTGGTTTTTCAAGATTGCCATCACCTGGAATTGCTGTTACCAGAGTTTCTCATCAGATCACCTAAACTGGAATCTCTCATCATAGATCATTTTGAGTACGCTTGTGGAGAACATACCAACAACTGTCGCTGGAGTCAACCAAAGAAGGTGCCTAATTGTTTGCTGTCACAGCTCAAGACTATCAGCCTGAGGGGATTAAGAGGAGCTCCTGATGAAATGAAAATGGCAAAGTATTTGTTAATGACTGGTAAAGTTCTGGAAACAGTGACCGTTTCAACTACAAGTGACAGGGATCTTCTTTCTGTGTATGCAACAGAGAAGGAATTACAGAAGACATTATGTACCTTTCAAAAGGGTTCAAAGACCTGTGTAGTTAAATTCGTGAAGGACAAAGTTCGTAGGTCCCTAGACTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

465

Amino Acids

53.25

Weight (kDa)

6.17

Isoelectric Point (pI)

39.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 50 2e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 82 - 208 5.9e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 101 - 210 1.2e-13 FBD-associated F-box protein At5g56370, LRR repeats
LRR_At1g61320_AtMIF1 PF23622 244 - 459 1.5e-06 At1g61320/AtMIF1, LRR domain
FBD PF08387 373 - 417 1.2e-12 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1129
AccB7I CCANNNNNTGG 2 cut(s) 132, 1006
AccI GTMKAC 1 cut(s) 717
AccII CGCG 1 cut(s) 174
AciI CCGC 2 cut(s) 172, 954
AclI AACGTT 1 cut(s) 330
AclWI GGATC 4 cut(s) 351, 364, 446, 1281
AcsI RAATTY 3 cut(s) 598, 781, 1358
AcuI CTGAAG 1 cut(s) 644
AfaI GTAC 5 cut(s) 225, 313, 859, 1079, 1324
AfiI CCNNNNNNNGG 5 cut(s) 132, 241, 279, 959, 1006
AflII CTTAAG 1 cut(s) 967
AjnI CCWGG 2 cut(s) 369, 1005
AjuI GAANNNNNNNTTGG 2 cut(s) 152, 184
Alw21I GWGCWC 1 cut(s) 1189
Alw26I GTCTC 4 cut(s) 266, 360, 482, 921
AlwI GGATC 4 cut(s) 351, 364, 446, 1281
AoxI GGCC 1 cut(s) 147
ApeKI GCWGC 3 cut(s) 543, 800, 890
ApoI RAATTY 3 cut(s) 598, 781, 1358
ArsI GACNNNNNNTTYG 4 cut(s) 103, 135, 244, 276
AseI ATTAAT 2 cut(s) 732, 825
Asp700I GAANNNNTTC 1 cut(s) 533
AspS9I GGNCC 4 cut(s) 111, 147, 484, 1383
AsuHPI GGTGA 2 cut(s) 995, 1032
AvaII GGWCC 3 cut(s) 111, 484, 1383
AxyI CCTNAGG 1 cut(s) 1169
BamHI GGATCC 1 cut(s) 356
BanI GGYRCC 1 cut(s) 1129
BanII GRGCYC 1 cut(s) 1189
BbsI GAAGAC 2 cut(s) 632, 1319
Bbv12I GWGCWC 1 cut(s) 1189
BbvI GCAGC 3 cut(s) 530, 812, 902
BccI CCATC 3 cut(s) 126, 466, 1008
BceAI ACGGC 1 cut(s) 869
BciT130I CCWGG 2 cut(s) 371, 1007
BcoDI GTCTC 4 cut(s) 266, 360, 482, 921
BfaI CTAG 2 cut(s) 554, 1388
BfmI CTRYAG 1 cut(s) 315
BfrI CTTAAG 1 cut(s) 967
BglII AGATCT 1 cut(s) 58
BisI GCNGC 3 cut(s) 544, 801, 891
BlsI GCNGC 3 cut(s) 545, 802, 892
Bme1390I CCNGG 2 cut(s) 371, 1007
Bme18I GGWCC 3 cut(s) 111, 484, 1383
BmgT120I GGNCC 4 cut(s) 111, 147, 484, 1383
BmiI GGNNCC 3 cut(s) 358, 1131, 1385
BmrFI CCNGG 2 cut(s) 371, 1007
BmrI ACTGGG 1 cut(s) 468
BmsI GCATC 2 cut(s) 481, 812
BmuI ACTGGG 1 cut(s) 468
BpiI GAAGAC 2 cut(s) 632, 1319
BpmI CTGGAG 2 cut(s) 434, 1132
BpuEI CTTGAG 2 cut(s) 464, 1139
BsaBI GATNNNNATC 1 cut(s) 999
BsaI GGTCTC 1 cut(s) 360
BsaXI ACNNNNNCTCC 2 cut(s) 576, 606
Bsc4I CCNNNNNNNGG 5 cut(s) 132, 241, 279, 959, 1006
Bse1I ACTGG 4 cut(s) 417, 474, 1053, 1231
Bse21I CCTNAGG 1 cut(s) 1169
Bse8I GATNNNNATC 1 cut(s) 999
BseBI CCWGG 2 cut(s) 371, 1007
BseGI GGATG 2 cut(s) 443, 505
BseJI GATNNNNATC 1 cut(s) 999
BseLI CCNNNNNNNGG 5 cut(s) 132, 241, 279, 959, 1006
BseMII CTCAG 1 cut(s) 1160
BseNI ACTGG 4 cut(s) 417, 474, 1053, 1231
BseRI GAGGAG 1 cut(s) 1197
BseXI GCAGC 3 cut(s) 530, 812, 902
BsgI GTGCAG 3 cut(s) 534, 597, 864
Bsh1236I CGCG 1 cut(s) 174
BshFI GGCC 1 cut(s) 149
BshNI GGYRCC 1 cut(s) 1129
BsiHKAI GWGCWC 1 cut(s) 1189
BslFI GGGAC 2 cut(s) 141, 1369
BslI CCNNNNNNNGG 5 cut(s) 132, 241, 279, 959, 1006
BsmAI GTCTC 4 cut(s) 266, 360, 482, 921
BsmBI CGTCTC 1 cut(s) 266
BsmFI GGGAC 2 cut(s) 141, 1369
BsmI GAATGC 1 cut(s) 710
BsnI GGCC 1 cut(s) 149
Bso31I GGTCTC 1 cut(s) 360
Bsp1286I GDGCHC 1 cut(s) 1189
Bsp143I GATC 7 cut(s) 58, 343, 356, 451, 1037, 1066, 1273
BspACI CCGC 2 cut(s) 172, 954
BspANI GGCC 1 cut(s) 149
BspCNI CTCAG 1 cut(s) 1161
BspFNI CGCG 1 cut(s) 174
BspLI GGNNCC 3 cut(s) 358, 1131, 1385
BspMAI CTGCAG 1 cut(s) 319
BspPI GGATC 4 cut(s) 351, 364, 446, 1281
BspT107I GGYRCC 1 cut(s) 1129
BspTI CTTAAG 1 cut(s) 967
BspTNI GGTCTC 1 cut(s) 360
BsrI ACTGG 4 cut(s) 417, 474, 1053, 1231
BssMI GATC 7 cut(s) 58, 343, 356, 451, 1037, 1066, 1273
Bst2UI CCWGG 2 cut(s) 371, 1007
Bst4CI ACNGT 4 cut(s) 835, 1106, 1246, 1252
BstAFI CTTAAG 1 cut(s) 967
BstDEI CTNAG 1 cut(s) 1169
BstF5I GGATG 2 cut(s) 443, 505
BstFNI CGCG 1 cut(s) 174
BstKTI GATC 7 cut(s) 61, 346, 359, 454, 1040, 1069, 1276
BstMAI GTCTC 4 cut(s) 266, 360, 482, 921
BstMBI GATC 7 cut(s) 58, 343, 356, 451, 1037, 1066, 1273
BstMWI GCNNNNNNNGC 3 cut(s) 872, 887, 1150
BstNI CCWGG 2 cut(s) 371, 1007
BstSCI CCNGG 2 cut(s) 369, 1005
BstSFI CTRYAG 1 cut(s) 315
BstUI CGCG 1 cut(s) 174
BstV1I GCAGC 3 cut(s) 530, 812, 902
BstV2I GAAGAC 2 cut(s) 632, 1319
BstX2I RGATCY 3 cut(s) 58, 356, 1273
BstYI RGATCY 3 cut(s) 58, 356, 1273
Bsu36I CCTNAGG 1 cut(s) 1169
BsuRI GGCC 1 cut(s) 149
BtsCI GGATG 2 cut(s) 443, 505
BtsIMutI CAGTG 3 cut(s) 410, 831, 1251
Cfr13I GGNCC 4 cut(s) 111, 147, 484, 1383
CsiI ACCWGGT 1 cut(s) 369
Csp6I GTAC 5 cut(s) 224, 312, 858, 1078, 1323
CviAII CATG 1 cut(s) 839
CviQI GTAC 5 cut(s) 224, 312, 858, 1078, 1323
DdeI CTNAG 1 cut(s) 1169
DpnI GATC 7 cut(s) 60, 345, 358, 453, 1039, 1068, 1275
DpnII GATC 7 cut(s) 58, 343, 356, 451, 1037, 1066, 1273
Ecl136II GAGCTC 1 cut(s) 1187
Eco24I GRGCYC 1 cut(s) 1189
Eco31I GGTCTC 1 cut(s) 360
Eco32I GATATC 2 cut(s) 760, 772
Eco47I GGWCC 3 cut(s) 111, 484, 1383
Eco53kI GAGCTC 1 cut(s) 1187
Eco57I CTGAAG 1 cut(s) 644
Eco81I CCTNAGG 1 cut(s) 1169
EcoICRI GAGCTC 1 cut(s) 1187
EcoO109I RGGNCCY 2 cut(s) 484, 1383
EcoRII CCWGG 2 cut(s) 369, 1005
EcoRV GATATC 2 cut(s) 760, 772
EcoT22I ATGCAT 1 cut(s) 710
EcoT38I GRGCYC 1 cut(s) 1189
Esp3I CGTCTC 1 cut(s) 266
FaeI CATG 1 cut(s) 842
FalI AAGNNNNNCTT 2 cut(s) 330, 362
FaqI GGGAC 2 cut(s) 141, 1369
FatI CATG 1 cut(s) 838
FauI CCCGC 1 cut(s) 961
FblI GTMKAC 1 cut(s) 717
Fnu4HI GCNGC 3 cut(s) 544, 801, 891
FokI GGATG 2 cut(s) 450, 492
FriOI GRGCYC 1 cut(s) 1189
Fsp4HI GCNGC 3 cut(s) 544, 801, 891
FspBI CTAG 2 cut(s) 554, 1388
GluI GCNGC 3 cut(s) 544, 801, 891
GsuI CTGGAG 2 cut(s) 434, 1132
HaeIII GGCC 1 cut(s) 149
Hin1II CATG 1 cut(s) 842
HincII GTYRAC 1 cut(s) 1118
HindII GTYRAC 1 cut(s) 1118
HindIII AAGCTT 3 cut(s) 17, 530, 743
HinfI GANTC 6 cut(s) 5, 307, 518, 842, 1052, 1114
HphI GGTGA 2 cut(s) 995, 1032
Hpy166II GTNNAC 4 cut(s) 126, 718, 851, 1118
Hpy188I TCNGA 1 cut(s) 1037
Hpy8I GTNNAC 4 cut(s) 126, 718, 851, 1118
HpyAV CCTTC 5 cut(s) 130, 418, 1120, 1294, 1360
HpyCH4III ACNGT 4 cut(s) 835, 1106, 1246, 1252
HpyCH4IV ACGT 1 cut(s) 330
HpyCH4V TGCA 8 cut(s) 317, 551, 614, 708, 800, 875, 881, 1292
HpyF10VI GCNNNNNNNGC 3 cut(s) 872, 887, 1150
HpyF3I CTNAG 1 cut(s) 1169
HpySE526I ACGT 1 cut(s) 330
Hsp92II CATG 1 cut(s) 842
Kzo9I GATC 7 cut(s) 58, 343, 356, 451, 1037, 1066, 1273
LmnI GCTCC 3 cut(s) 703, 1184, 1192
Lsp1109I GCAGC 3 cut(s) 530, 812, 902
LweI GCATC 2 cut(s) 481, 812
MabI ACCWGGT 1 cut(s) 369
MaeI CTAG 2 cut(s) 554, 1388
MaeII ACGT 1 cut(s) 330
MaeIII GTNAC 6 cut(s) 236, 962, 1017, 1146, 1246, 1265
MalI GATC 7 cut(s) 60, 345, 358, 453, 1039, 1068, 1275
MboI GATC 7 cut(s) 58, 343, 356, 451, 1037, 1066, 1273
MboII GAAGA 9 cut(s) 35, 199, 223, 637, 695, 701, 718, 1268, 1324
MflI RGATCY 3 cut(s) 58, 356, 1273
MhlI GDGCHC 1 cut(s) 1189
MlyI GAGTC 2 cut(s) 512, 1123
MmeI TCCRAC 1 cut(s) 384
MnlI CCTC 8 cut(s) 102, 409, 459, 465, 497, 583, 1164, 1175
Mph1103I ATGCAT 1 cut(s) 710
MroXI GAANNNNTTC 1 cut(s) 533
MseI TTAA 9 cut(s) 348, 633, 732, 825, 968, 1178, 1220, 1356, 1396
MspCI CTTAAG 1 cut(s) 967
MspR9I CCNGG 2 cut(s) 371, 1007
Mva1269I GAATGC 1 cut(s) 710
MvaI CCWGG 2 cut(s) 371, 1007
MvnI CGCG 1 cut(s) 174
MwoI GCNNNNNNNGC 3 cut(s) 872, 887, 1150
NdeII GATC 7 cut(s) 58, 343, 356, 451, 1037, 1066, 1273
NlaIII CATG 1 cut(s) 842
NlaIV GGNNCC 3 cut(s) 358, 1131, 1385
NmuCI GTSAC 4 cut(s) 236, 1146, 1246, 1265
NsiI ATGCAT 1 cut(s) 710
PctI GAATGC 1 cut(s) 710
PdmI GAANNNNTTC 1 cut(s) 533
PfeI GAWTC 4 cut(s) 5, 307, 842, 1052
PflMI CCANNNNNTGG 2 cut(s) 132, 1006
PkrI GCNGC 3 cut(s) 545, 802, 892
PleI GAGTC 2 cut(s) 512, 1122
PpsI GAGTC 2 cut(s) 512, 1122
PpuMI RGGWCCY 2 cut(s) 484, 1383
PshBI ATTAAT 2 cut(s) 732, 825
Psp124BI GAGCTC 1 cut(s) 1189
Psp1406I AACGTT 1 cut(s) 330
Psp5II RGGWCCY 2 cut(s) 484, 1383
Psp6I CCWGG 2 cut(s) 369, 1005
PspGI CCWGG 2 cut(s) 369, 1005
PspN4I GGNNCC 3 cut(s) 358, 1131, 1385
PspPI GGNCC 4 cut(s) 111, 147, 484, 1383
PspPPI RGGWCCY 2 cut(s) 484, 1383
PstI CTGCAG 1 cut(s) 319
PsuI RGATCY 3 cut(s) 58, 356, 1273
RsaI GTAC 5 cut(s) 225, 313, 859, 1079, 1324
RsaNI GTAC 5 cut(s) 224, 312, 858, 1078, 1323
SacI GAGCTC 1 cut(s) 1189
SaqAI TTAA 9 cut(s) 348, 633, 732, 825, 968, 1178, 1220, 1356, 1396
SatI GCNGC 3 cut(s) 544, 801, 891
Sau3AI GATC 7 cut(s) 58, 343, 356, 451, 1037, 1066, 1273
Sau96I GGNCC 4 cut(s) 111, 147, 484, 1383
SchI GAGTC 2 cut(s) 512, 1123
ScrFI CCNGG 2 cut(s) 371, 1007
SduI GDGCHC 1 cut(s) 1189
SexAI ACCWGGT 1 cut(s) 369
SfaNI GCATC 2 cut(s) 481, 812
SfcI CTRYAG 1 cut(s) 315
SinI GGWCC 3 cut(s) 111, 484, 1383
SmlI CTYRAG 3 cut(s) 479, 967, 1154
SmoI CTYRAG 3 cut(s) 479, 967, 1154
SsiI CCGC 2 cut(s) 172, 954
SspI AATATT 2 cut(s) 560, 823
SspMI CTAG 2 cut(s) 554, 1388
SstI GAGCTC 1 cut(s) 1189
StyD4I CCNGG 2 cut(s) 369, 1005
TaaI ACNGT 4 cut(s) 835, 1106, 1246, 1252
TaiI ACGT 1 cut(s) 333
TaqI TCGA 2 cut(s) 264, 489
TfiI GAWTC 4 cut(s) 5, 307, 842, 1052
Tru1I TTAA 9 cut(s) 348, 633, 732, 825, 968, 1178, 1220, 1356, 1396
Tru9I TTAA 9 cut(s) 348, 633, 732, 825, 968, 1178, 1220, 1356, 1396
TscAI CASTG 3 cut(s) 417, 838, 1251
TseFI GTSAC 4 cut(s) 236, 1146, 1246, 1265
TseI GCWGC 3 cut(s) 543, 800, 890
Tsp45I GTSAC 4 cut(s) 236, 1146, 1246, 1265
TspDTI ATGAA 9 cut(s) 62, 678, 684, 702, 708, 718, 827, 1209, 1214
TspGWI ACGGA 2 cut(s) 224, 257
TspRI CASTG 3 cut(s) 417, 838, 1251
Van91I CCANNNNNTGG 2 cut(s) 132, 1006
Vha464I CTTAAG 1 cut(s) 967
VpaK11BI GGWCC 3 cut(s) 111, 484, 1383
VspI ATTAAT 2 cut(s) 732, 825
XapI RAATTY 3 cut(s) 598, 781, 1358
XmiI GTMKAC 1 cut(s) 717
XmnI GAANNNNTTC 1 cut(s) 533
XspI CTAG 2 cut(s) 554, 1388
Zsp2I ATGCAT 1 cut(s) 710
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.