Rorug04G0147500

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000062
Physical Location & Seq
Forward (+)
25855923 .. 25861397
5475 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0147500.1

Sequence Viewer

Length: 1689 bp
ATGAATACGGCATTTGCGGCTTTAAATTCCTCAAAGCCTAAACCCACTATGCCAATAACTCAATCATACAACAGACATCAGACGACAGAAAGCTCAACTGATCTCAAACTGGGCATCTCTCAAGTCTCTATTGAAACTGCGGCCAGCGACCACAGGGCATCCACGACCGATTATCGGACCCTAATCTCAAATTCAGCAGCAGATCGAGTAGCGGCGGTGCACTTGAAGAAAACCATGATAGCCCATCTAACAATCGTCCGTGAAGAACCCATTGAAGGAAGTAGAGGACGAGTTGATCTAGAGGAAGAAGAAGAAGAAGAAATTGGGGCCGATTTTCCAAAAGGCTTGAAGTTGAAATCGAAGTTGATCGACGCGGTTGCAAAGTTTGGTGCCTTGGTGGGAAATGTGGACGTGCACCCCTGTCTGCTAGTTGTTCATTCACTACGGCCTCAGATTCTTCTGCTCAAGAAGCCAACTTTCTGCATAGTGGTAGGCATCAAGACCCATTCTTTTATTCTCCTACTGTGGTATAATGGTGCAGAAGGCCTCCACACGAAAGTGACCGAGTTTGTCAGGGACAAAGACTGTGTTGTATGTGGCCCAGGTGTGCTTATTGAGCTGGACACCTCAGTTACTTTGCGAAAGGTACAGTCAAGAAATGTCAAGTCAGAGTTTAAACTCGCAATAGGTTCTGTGGACAACATAGTTGCTTTTGGAACCGTTGTTGAAGTTGATGTCGAGGCCACACAGCAGACTATCCATGGTGTACCATTGGGAGAAAAAAATGTACGCGTCTCAGTCACTGAAGCGGTTGTTGCTAATGCTTTGCTACCATTTCCTATCAAAGATGAGATTGTGAGAGTTGCCGATGCGATTGGCACATGTGTTGCTTGGCCTAGAAGCTTGGTTATACCCCCTGAAGTTGTTGACAAGGAGCAAGAAAACCGTAAAATTGTGAAAAAGAAAAGGAGGGAAATGTATGAAGATTTTGATCATGATGACCTTGACAACCTGCCCCCCAAACTGCCATTACCACTAAAGGAGCTGTGCCACTGGGCCAATATATTCTTGAAGAATGGGGTCACCATCCACACCACTTTGGGCGAGGAAATTTTTGGCCGCCCAAGAAAGGTAGCTATCTTTAGAAGAGATGTGTATGCCTTGACGCACATGAAGGAGATATCTAACAACACCATTGTGATGTATATGAGCTGCCTTTACCAAAAGTTGCAGAAATTTAAGATGCTGCACATGATTGCCTTCATAGACCCTGCTCAGGCAGGTGCGCTTGGGTGTGGGAATCCAACAGAAATGGCTCGTTCTCTGTCAGCTTGTTATGCAAAAGGGAAGTCGGAAGTTGTGCATTTCATGGATCCATTGAAGAGACGACTTATCACCGGTGAATGGAAAACTATTGTGGACAACTCAATCAAACTATACAATGCGCAAAAAACTAAGAAAGGCAGAAAAATAGTTACATGGAAAAATTGTGCGGGCATTCCGGAGCAGCAAGGTGATAAAACCTGTGGGTTTTGGATTATGCATTACATGAAGGACATAGTGGAGGACAAGAACCAAGAGTGGAGTGTTAAGTGGGACAGAAAGGGAAGCAACATGTACACACAAAATGATATTGATAAGGTTCGGGCCGAGTGGGCACAATATGTTGCCCAATTTCAAGAAAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

562

Amino Acids

63.19

Weight (kDa)

8.65

Isoelectric Point (pI)

35.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF8039 PF26133 228 - 304 5.6e-11 Domain of unknown function (DUF8039)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1271
Acc16I TGCGCA 1 cut(s) 1446
Acc36I ACCTGC 2 cut(s) 1020, 1271
AccB1I GGYRCC 1 cut(s) 389
AccII CGCG 2 cut(s) 374, 792
AccIII TCCGGA 1 cut(s) 1501
AciI CCGC 8 cut(s) 17, 140, 212, 215, 374, 809, 1120, 1493
AclWI GGATC 2 cut(s) 1367, 1380
AcoI YGGCCR 2 cut(s) 141, 1117
AcsI RAATTY 4 cut(s) 25, 190, 1110, 1235
AcuI CTGAAG 2 cut(s) 825, 939
AfaI GTAC 4 cut(s) 648, 768, 789, 1619
AfiI CCNNNNNNNGG 5 cut(s) 174, 275, 1129, 1276, 1404
AflIII ACRYGT 3 cut(s) 790, 881, 1614
AgeI ACCGGT 1 cut(s) 1397
AgsI TTSAA 9 cut(s) 134, 226, 275, 349, 355, 728, 1072, 1381, 1679
AjiI CACGTC 1 cut(s) 412
AjnI CCWGG 1 cut(s) 601
AjuI GAANNNNNNNTTGG 2 cut(s) 306, 338
AleI CACNNNNGTG 2 cut(s) 557, 1196
AluBI AGCT 8 cut(s) 93, 619, 903, 1045, 1136, 1212, 1331, 1686
AluI AGCT 8 cut(s) 93, 619, 903, 1045, 1136, 1212, 1331, 1686
Alw21I GWGCWC 2 cut(s) 222, 417
Alw26I GTCTC 3 cut(s) 130, 799, 1378
Alw44I GTGCAC 2 cut(s) 218, 413
AlwI GGATC 2 cut(s) 1367, 1380
AlwNI CAGNNNCTG 1 cut(s) 803
Aor13HI TCCGGA 1 cut(s) 1501
ApaLI GTGCAC 2 cut(s) 218, 413
ApeKI GCWGC 4 cut(s) 197, 1212, 1246, 1507
ApoI RAATTY 4 cut(s) 25, 190, 1110, 1235
ArsI GACNNNNNNTTYG 2 cut(s) 1334, 1366
AsiGI ACCGGT 1 cut(s) 1397
AspLEI GCGC 2 cut(s) 1288, 1447
AspS9I GGNCC 5 cut(s) 177, 327, 599, 1056, 1647
AsuHPI GGTGA 4 cut(s) 1075, 1387, 1412, 1526
AvaII GGWCC 1 cut(s) 177
BaeGI GKGCMC 3 cut(s) 222, 417, 1660
BamHI GGATCC 1 cut(s) 1372
BanI GGYRCC 1 cut(s) 389
Bbv12I GWGCWC 2 cut(s) 222, 417
BbvI GCAGC 4 cut(s) 209, 1199, 1233, 1519
BccI CCATC 2 cut(s) 252, 1094
BceAI ACGGC 2 cut(s) 24, 461
BcgI CGANNNNNNTGC 2 cut(s) 359, 393
BciT130I CCWGG 1 cut(s) 603
BclI TGATCA 1 cut(s) 991
BcoDI GTCTC 3 cut(s) 130, 799, 1378
BfaI CTAG 4 cut(s) 299, 428, 897, 1687
BfuAI ACCTGC 2 cut(s) 1020, 1271
BglI GCCNNNNNGGC 1 cut(s) 1655
BisI GCNGC 8 cut(s) 18, 141, 198, 213, 1120, 1213, 1247, 1508
BlsI GCNGC 8 cut(s) 19, 142, 199, 214, 1121, 1214, 1248, 1509
Bme1390I CCNGG 1 cut(s) 603
Bme18I GGWCC 1 cut(s) 177
BmgBI CACGTC 1 cut(s) 412
BmgT120I GGNCC 5 cut(s) 177, 327, 599, 1056, 1647
BmiI GGNNCC 5 cut(s) 179, 328, 391, 718, 1374
BmrFI CCNGG 1 cut(s) 603
BmrI ACTGGG 2 cut(s) 119, 1063
BmsI GCATC 5 cut(s) 123, 167, 504, 859, 1233
BmuI ACTGGG 2 cut(s) 119, 1063
Bpu10I CCTNAGC 1 cut(s) 1275
BpuEI CTTGAG 2 cut(s) 105, 449
BsaBI GATNNNNATC 1 cut(s) 990
BsaJI CCNNGG 3 cut(s) 393, 601, 760
BsaWI WCCGGW 2 cut(s) 1397, 1501
Bsc4I CCNNNNNNNGG 5 cut(s) 174, 275, 1129, 1276, 1404
Bse118I RCCGGY 1 cut(s) 1397
Bse1I ACTGG 2 cut(s) 114, 1058
Bse8I GATNNNNATC 1 cut(s) 990
BseAI TCCGGA 1 cut(s) 1501
BseBI CCWGG 1 cut(s) 603
BseDI CCNNGG 3 cut(s) 393, 601, 760
BseGI GGATG 2 cut(s) 158, 1086
BseJI GATNNNNATC 1 cut(s) 990
BseLI CCNNNNNNNGG 5 cut(s) 174, 275, 1129, 1276, 1404
BseMII CTCAG 4 cut(s) 464, 642, 810, 1289
BseNI ACTGG 2 cut(s) 114, 1058
BseSI GKGCMC 3 cut(s) 222, 417, 1660
BseXI GCAGC 4 cut(s) 209, 1199, 1233, 1519
BsgI GTGCAG 2 cut(s) 558, 1232
Bsh1236I CGCG 2 cut(s) 374, 792
Bsh1285I CGRYCG 1 cut(s) 168
BshNI GGYRCC 1 cut(s) 389
BshTI ACCGGT 1 cut(s) 1397
BsiEI CGRYCG 1 cut(s) 168
BsiHKAI GWGCWC 2 cut(s) 222, 417
BsiSI CCGG 2 cut(s) 1398, 1502
BslFI GGGAC 2 cut(s) 590, 1610
BslI CCNNNNNNNGG 5 cut(s) 174, 275, 1129, 1276, 1404
BsmAI GTCTC 3 cut(s) 130, 799, 1378
BsmBI CGTCTC 2 cut(s) 799, 1378
BsmFI GGGAC 2 cut(s) 590, 1610
BsmI GAATGC 1 cut(s) 1497
Bsp1286I GDGCHC 3 cut(s) 222, 417, 1660
Bsp13I TCCGGA 1 cut(s) 1501
Bsp1407I TGTACA 1 cut(s) 1617
Bsp143I GATC 6 cut(s) 100, 202, 295, 366, 991, 1372
Bsp19I CCATGG 1 cut(s) 760
BspACI CCGC 8 cut(s) 17, 140, 212, 215, 374, 809, 1120, 1493
BspCNI CTCAG 4 cut(s) 463, 641, 809, 1288
BspEI TCCGGA 1 cut(s) 1501
BspFNI CGCG 2 cut(s) 374, 792
BspHI TCATGA 1 cut(s) 994
BspLI GGNNCC 5 cut(s) 179, 328, 391, 718, 1374
BspMI ACCTGC 2 cut(s) 1020, 1271
BspPI GGATC 2 cut(s) 1367, 1380
BspT107I GGYRCC 1 cut(s) 389
BsrFI RCCGGY 1 cut(s) 1397
BsrGI TGTACA 1 cut(s) 1617
BsrI ACTGG 2 cut(s) 114, 1058
BssAI RCCGGY 1 cut(s) 1397
BssECI CCNNGG 3 cut(s) 393, 601, 760
BssMI GATC 6 cut(s) 100, 202, 295, 366, 991, 1372
BssT1I CCWWGG 2 cut(s) 393, 760
Bst2UI CCWGG 1 cut(s) 603
Bst4CI ACNGT 5 cut(s) 525, 587, 651, 721, 947
Bst6I CTCTTC 2 cut(s) 1141, 1376
BstAUI TGTACA 1 cut(s) 1617
BstC8I GCNNGC 2 cut(s) 145, 1495
BstDEI CTNAG 5 cut(s) 450, 628, 796, 1275, 1455
BstDSI CCRYGG 1 cut(s) 760
BstEII GGTNACC 1 cut(s) 1081
BstF5I GGATG 2 cut(s) 158, 1086
BstFNI CGCG 2 cut(s) 374, 792
BstHHI GCGC 2 cut(s) 1288, 1447
BstKTI GATC 6 cut(s) 103, 205, 298, 369, 994, 1375
BstMAI GTCTC 3 cut(s) 130, 799, 1378
BstMBI GATC 6 cut(s) 100, 202, 295, 366, 991, 1372
BstMCI CGRYCG 1 cut(s) 168
BstMWI GCNNNNNNNGC 6 cut(s) 17, 469, 616, 815, 1337, 1655
BstNI CCWGG 1 cut(s) 603
BstNSI RCATGY 2 cut(s) 885, 1618
BstPI GGTNACC 1 cut(s) 1081
BstSCI CCNGG 1 cut(s) 601
BstSLI GKGCMC 3 cut(s) 222, 417, 1660
BstUI CGCG 2 cut(s) 374, 792
BstV1I GCAGC 4 cut(s) 209, 1199, 1233, 1519
BstX2I RGATCY 1 cut(s) 1372
BstYI RGATCY 1 cut(s) 1372
BtgI CCRYGG 1 cut(s) 760
BtrI CACGTC 1 cut(s) 412
BtsCI GGATG 2 cut(s) 158, 1086
BtsIMutI CAGTG 2 cut(s) 801, 1051
BveI ACCTGC 2 cut(s) 1020, 1271
Cac8I GCNNGC 2 cut(s) 145, 1495
CaiI CAGNNNCTG 1 cut(s) 803
CciI TCATGA 1 cut(s) 994
CfoI GCGC 2 cut(s) 1288, 1447
Cfr10I RCCGGY 1 cut(s) 1397
Cfr13I GGNCC 5 cut(s) 177, 327, 599, 1056, 1647
CseI GACGC 3 cut(s) 380, 781, 1174
Csp6I GTAC 4 cut(s) 647, 767, 788, 1618
CspAI ACCGGT 1 cut(s) 1397
CviQI GTAC 4 cut(s) 647, 767, 788, 1618
DdeI CTNAG 5 cut(s) 450, 628, 796, 1275, 1455
DpnI GATC 6 cut(s) 102, 204, 297, 368, 993, 1374
DpnII GATC 6 cut(s) 100, 202, 295, 366, 991, 1372
DraI TTTAAA 2 cut(s) 24, 676
EaeI YGGCCR 2 cut(s) 141, 1117
Eam1104I CTCTTC 2 cut(s) 1141, 1376
EarI CTCTTC 2 cut(s) 1141, 1376
Eco130I CCWWGG 2 cut(s) 393, 760
Eco147I AGGCCT 1 cut(s) 546
Eco32I GATATC 1 cut(s) 1182
Eco47I GGWCC 1 cut(s) 177
Eco57I CTGAAG 2 cut(s) 825, 939
Eco91I GGTNACC 1 cut(s) 1081
EcoO65I GGTNACC 1 cut(s) 1081
EcoRII CCWGG 1 cut(s) 601
EcoRV GATATC 1 cut(s) 1182
EcoT14I CCWWGG 2 cut(s) 393, 760
EcoT22I ATGCAT 1 cut(s) 1545
ErhI CCWWGG 2 cut(s) 393, 760
Esp3I CGTCTC 2 cut(s) 799, 1378
FaqI GGGAC 2 cut(s) 590, 1610
FauI CCCGC 1 cut(s) 1486
FbaI TGATCA 1 cut(s) 991
Fnu4HI GCNGC 8 cut(s) 18, 141, 198, 213, 1120, 1213, 1247, 1508
FokI GGATG 2 cut(s) 145, 1073
Fsp4HI GCNGC 8 cut(s) 18, 141, 198, 213, 1120, 1213, 1247, 1508
FspBI CTAG 4 cut(s) 299, 428, 897, 1687
FspI TGCGCA 1 cut(s) 1446
GlaI GCGC 2 cut(s) 1287, 1446
GluI GCNGC 8 cut(s) 18, 141, 198, 213, 1120, 1213, 1247, 1508
HapII CCGG 2 cut(s) 1398, 1502
HgaI GACGC 3 cut(s) 380, 781, 1174
HhaI GCGC 2 cut(s) 1288, 1447
Hin6I GCGC 2 cut(s) 1286, 1445
HinP1I GCGC 2 cut(s) 1286, 1445
HincII GTYRAC 1 cut(s) 928
HindII GTYRAC 1 cut(s) 928
HindIII AAGCTT 1 cut(s) 901
HinfI GANTC 2 cut(s) 454, 1300
HpaII CCGG 2 cut(s) 1398, 1502
HphI GGTGA 4 cut(s) 1075, 1387, 1412, 1526
Hpy166II GTNNAC 8 cut(s) 220, 409, 415, 697, 767, 928, 1420, 1620
Hpy188I TCNGA 5 cut(s) 81, 177, 453, 670, 1354
Hpy188III TCNNGA 8 cut(s) 299, 466, 499, 654, 995, 1069, 1502, 1679
Hpy8I GTNNAC 8 cut(s) 220, 409, 415, 697, 767, 928, 1420, 1620
Hpy99I CGWCG 1 cut(s) 374
HpyAV CCTTC 5 cut(s) 269, 536, 1168, 1270, 1546
HpyCH4III ACNGT 5 cut(s) 525, 587, 651, 721, 947
HpyCH4IV ACGT 1 cut(s) 411
HpyF10VI GCNNNNNNNGC 6 cut(s) 17, 469, 616, 815, 1337, 1655
HpyF3I CTNAG 5 cut(s) 450, 628, 796, 1275, 1455
HpySE526I ACGT 1 cut(s) 411
HspAI GCGC 2 cut(s) 1286, 1445
Kpn2I TCCGGA 1 cut(s) 1501
Ksp22I TGATCA 1 cut(s) 991
Kzo9I GATC 6 cut(s) 100, 202, 295, 366, 991, 1372
LmnI GCTCC 3 cut(s) 934, 1042, 1504
Lsp1109I GCAGC 4 cut(s) 209, 1199, 1233, 1519
LweI GCATC 5 cut(s) 123, 167, 504, 859, 1233
MaeI CTAG 4 cut(s) 299, 428, 897, 1687
MaeII ACGT 1 cut(s) 411
MaeIII GTNAC 5 cut(s) 559, 631, 799, 1081, 1474
MalI GATC 6 cut(s) 102, 204, 297, 368, 993, 1374
MboI GATC 6 cut(s) 100, 202, 295, 366, 991, 1372
MflI RGATCY 1 cut(s) 1372
MhlI GDGCHC 3 cut(s) 222, 417, 1660
MluCI AATT 8 cut(s) 25, 190, 321, 951, 1110, 1235, 1486, 1673
MluI ACGCGT 1 cut(s) 790
MmeI TCCRAC 2 cut(s) 1328, 1332
Mph1103I ATGCAT 1 cut(s) 1545
MroI TCCGGA 1 cut(s) 1501
MseI TTAA 4 cut(s) 23, 675, 1239, 1590
MslI CAYNNNNRTG 3 cut(s) 557, 1196, 1199
MspI CCGG 2 cut(s) 1398, 1502
MspR9I CCNGG 1 cut(s) 603
MssI GTTTAAAC 1 cut(s) 676
Mva1269I GAATGC 1 cut(s) 1497
MvaI CCWGG 1 cut(s) 603
MvnI CGCG 2 cut(s) 374, 792
MwoI GCNNNNNNNGC 6 cut(s) 17, 469, 616, 815, 1337, 1655
NcoI CCATGG 1 cut(s) 760
NdeII GATC 6 cut(s) 100, 202, 295, 366, 991, 1372
NlaIV GGNNCC 5 cut(s) 179, 328, 391, 718, 1374
NmeAIII GCCGAG 1 cut(s) 1675
NmuCI GTSAC 3 cut(s) 559, 799, 1081
NsbI TGCGCA 1 cut(s) 1446
NsiI ATGCAT 1 cut(s) 1545
NspI RCATGY 2 cut(s) 885, 1618
OliI CACNNNNGTG 2 cut(s) 557, 1196
PagI TCATGA 1 cut(s) 994
PaqCI CACCTGC 1 cut(s) 1271
PceI AGGCCT 1 cut(s) 546
PciI ACATGT 2 cut(s) 881, 1614
PctI GAATGC 1 cut(s) 1497
PfeI GAWTC 2 cut(s) 454, 1300
PinAI ACCGGT 1 cut(s) 1397
PkrI GCNGC 8 cut(s) 19, 142, 199, 214, 1121, 1214, 1248, 1509
PmeI GTTTAAAC 1 cut(s) 676
PscI ACATGT 2 cut(s) 881, 1614
Psp6I CCWGG 1 cut(s) 601
PspEI GGTNACC 1 cut(s) 1081
PspGI CCWGG 1 cut(s) 601
PspN4I GGNNCC 5 cut(s) 179, 328, 391, 718, 1374
PspPI GGNCC 5 cut(s) 177, 327, 599, 1056, 1647
PstNI CAGNNNCTG 1 cut(s) 803
PsuI RGATCY 1 cut(s) 1372
RsaI GTAC 4 cut(s) 648, 768, 789, 1619
RsaNI GTAC 4 cut(s) 647, 767, 788, 1618
RseI CAYNNNNRTG 3 cut(s) 557, 1196, 1199
SaqAI TTAA 4 cut(s) 23, 675, 1239, 1590
SatI GCNGC 8 cut(s) 18, 141, 198, 213, 1120, 1213, 1247, 1508
Sau3AI GATC 6 cut(s) 100, 202, 295, 366, 991, 1372
Sau96I GGNCC 5 cut(s) 177, 327, 599, 1056, 1647
ScrFI CCNGG 1 cut(s) 603
SduI GDGCHC 3 cut(s) 222, 417, 1660
SfaNI GCATC 5 cut(s) 123, 167, 504, 859, 1233
SgrAI CRCCGGYG 1 cut(s) 1397
SinI GGWCC 1 cut(s) 177
SmiMI CAYNNNNRTG 3 cut(s) 557, 1196, 1199
SmlI CTYRAG 2 cut(s) 120, 464
SmoI CTYRAG 2 cut(s) 120, 464
Sse9I AATT 8 cut(s) 25, 190, 321, 951, 1110, 1235, 1486, 1673
SseBI AGGCCT 1 cut(s) 546
SsiI CCGC 8 cut(s) 17, 140, 212, 215, 374, 809, 1120, 1493
SspMI CTAG 4 cut(s) 299, 428, 897, 1687
StuI AGGCCT 1 cut(s) 546
StyD4I CCNGG 1 cut(s) 601
StyI CCWWGG 2 cut(s) 393, 760
TaaI ACNGT 5 cut(s) 525, 587, 651, 721, 947
TaiI ACGT 1 cut(s) 414
TaqI TCGA 4 cut(s) 205, 359, 369, 738
TaqII GACCGA 2 cut(s) 182, 578
TasI AATT 8 cut(s) 25, 190, 321, 951, 1110, 1235, 1486, 1673
TatI WGTACW 1 cut(s) 1617
TauI GCSGC 4 cut(s) 20, 143, 215, 1122
TfiI GAWTC 2 cut(s) 454, 1300
Tru1I TTAA 4 cut(s) 23, 675, 1239, 1590
Tru9I TTAA 4 cut(s) 23, 675, 1239, 1590
TscAI CASTG 2 cut(s) 808, 1058
TseFI GTSAC 3 cut(s) 559, 799, 1081
TseI GCWGC 4 cut(s) 197, 1212, 1246, 1507
Tsp45I GTSAC 3 cut(s) 559, 799, 1081
TspDTI ATGAA 7 cut(s) 17, 425, 996, 1187, 1252, 1357, 1565
TspGWI ACGGA 1 cut(s) 248
TspRI CASTG 2 cut(s) 808, 1058
VneI GTGCAC 2 cut(s) 218, 413
VpaK11BI GGWCC 1 cut(s) 177
XapI RAATTY 4 cut(s) 25, 190, 1110, 1235
XbaI TCTAGA 1 cut(s) 298
XceI RCATGY 2 cut(s) 885, 1618
XspI CTAG 4 cut(s) 299, 428, 897, 1687
Zsp2I ATGCAT 1 cut(s) 1545
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.