FvH4_2g40800

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000062
Physical Location & Seq
Reverse (-)
28996257 .. 29002591
6335 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g40800.t5

Sequence Viewer

Length: 1347 bp
ATGGGTTCACACGTAGGAAACGATGAAGATAAGATTAGTCAATTACCAGATGCACTTCTATCTCACATGCTGTCCTTCTTGTTAACCAAAGATGCTGTGAGGACCAGCATTCTCTCTAAAAGGTGGAAGAACATATGGGCTTCTGTTCCCTCTCTAGACTTTGAACATTACAGTTGTGCTGGGTTTGTGTCATTTGTTGATCGTGTGCTTTACTATCGAGATTCACTTGACATTCAAAGATTTCGTCTCCACTTTAAGTGTTTTCCTATTGATGTCTCTTCTATTGATCGTTGGATTCGCACTGCTACTTCCCATAACGTTGTTGAACTTGATCTATGTCTTAATTTTTTGGGAGGAGTGGAGTTTGAGGTCCCTGAAAGTGTTTTTGAGTGCAAAACACTGGTGGTTTTGAAGCTGAAGTCGGATTCTTCTTTTACGTATGCTCCTCCTAAGTTAGGGTGTTTTCCTAATCTCAAGTGTCTACATATAACAATTGATTATCCTGATAAGGACCTTTTGGAGAAACTTTTCTCATACTTCCCCGTACTTGAAGACTTGAGTGTAGAGGGAGAATGGAATGATCATGTAAATTGTAATGTCAAGCTTTTTGTGCCTAAACTAAAGAGGTTAAGTATAAACATTCACAGTACTGGCTATTTTGACGAACCTTATGAGTACTACTTCTCTATCGATGCCCCAAAACTTGAATTCCTTGACCTCAGAGTGGATATTTTGCCGAGTATGTCTTTTGACAATTCAAAGTCCCTGGTAAAAGCCATTGTGGGTTTCTATTACCATCCGGCAATTATGCAAGAGCACTTTTGTGATCGTGCAACTAAGATTCTGGCACCAGTTTCCAATGTTGAACATCTTTCTCTTTCAGCTCATTTTTTGGATGCTTCTTGTATACCTGCTTTTGGTAATCTGATCCATTTGAAGCTGGTTCTTCATGACTGCTATCGTTGGGAAGTGCTGGCAGAGCTACTCAAGAAATCACCAAATCTAGAATGTCTTGTCTTGGAACATGAACAGGACAATAACTGTTACCCTGAAAACTCGGAGGATGAAGAAAATGCAGTGGACCAAGAAAACACCGAGGATCCATGGTGGAATTGTGAAGAGTCTGCACCTCGTTGTTTGTTGTCACATCTCAAGACTGTCTTAATTAGGGGTTTCATGGGTTGCCGGGATGAGAAACAAGCTGCAAAGTACTTATTGAAGAATGGTGCAGTTTTGGAGGAGATGACTATTTATGTGGATAATGTTTTGTACTCAAGAGAGAAGCTTTGCATGGAATTTGCACACTTTCAACGTGGTTCCATGACTTGTCGGCTTCAATTGGTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

449

Amino Acids

51.69

Weight (kDa)

5.3

Isoelectric Point (pI)

41.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 12 - 51 9.5e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 73 - 418 9.8e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 95 - 244 7.4e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 374 - 417 2.1e-16 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 919
AccB1I GGYRCC 1 cut(s) 847
AccI GTMKAC 2 cut(s) 481, 907
AclI AACGTT 1 cut(s) 318
AclWI GGATC 3 cut(s) 922, 1094, 1107
AcsI RAATTY 2 cut(s) 707, 1295
AcuI CTGAAG 1 cut(s) 437
AfaI GTAC 5 cut(s) 546, 649, 677, 1211, 1271
AfiI CCNNNNNNNGG 3 cut(s) 455, 724, 917
AflIII ACRYGT 1 cut(s) 10
AjnI CCWGG 1 cut(s) 765
AleI CACNNNNGTG 1 cut(s) 822
AluBI AGCT 7 cut(s) 415, 604, 884, 940, 982, 1202, 1285
AluI AGCT 7 cut(s) 415, 604, 884, 940, 982, 1202, 1285
Alw21I GWGCWC 1 cut(s) 819
Alw26I GTCTC 2 cut(s) 251, 280
AlwI GGATC 3 cut(s) 922, 1094, 1107
ApeKI GCWGC 1 cut(s) 1202
ApoI RAATTY 2 cut(s) 707, 1295
ArsI GACNNNNNNTTYG 2 cut(s) 229, 261
Asp700I GAANNNNTTC 1 cut(s) 527
AspS9I GGNCC 4 cut(s) 102, 370, 511, 1081
AsuC2I CCSGG 1 cut(s) 1187
AsuHPI GGTGA 1 cut(s) 987
AvaII GGWCC 4 cut(s) 102, 370, 511, 1081
BamHI GGATCC 1 cut(s) 1099
BanI GGYRCC 1 cut(s) 847
BbsI GAAGAC 1 cut(s) 558
Bbv12I GWGCWC 1 cut(s) 819
BbvI GCAGC 1 cut(s) 1189
BccI CCATC 1 cut(s) 804
BciT130I CCWGG 1 cut(s) 767
BclI TGATCA 1 cut(s) 580
BcnI CCSGG 1 cut(s) 1187
BcoDI GTCTC 2 cut(s) 251, 280
BfaI CTAG 2 cut(s) 155, 1004
BfuAI ACCTGC 1 cut(s) 919
BisI GCNGC 1 cut(s) 1203
BlsI GCNGC 1 cut(s) 1204
BmcAI AGTACT 3 cut(s) 649, 677, 1211
Bme1390I CCNGG 2 cut(s) 767, 1187
Bme18I GGWCC 4 cut(s) 102, 370, 511, 1081
BmgT120I GGNCC 4 cut(s) 102, 370, 511, 1081
BmiI GGNNCC 4 cut(s) 372, 849, 1101, 1318
BmrFI CCNGG 2 cut(s) 767, 1187
BmsI GCATC 4 cut(s) 40, 82, 682, 886
BpiI GAAGAC 1 cut(s) 558
BpuEI CTTGAG 5 cut(s) 458, 577, 971, 1136, 1258
BpuMI CCSGG 1 cut(s) 1187
Bsa29I ATCGAT 1 cut(s) 690
BsaAI YACGTR 2 cut(s) 13, 438
BsaJI CCNNGG 3 cut(s) 765, 1095, 1103
BsaXI ACNNNNNCTCC 2 cut(s) 427, 457
Bsc4I CCNNNNNNNGG 3 cut(s) 455, 724, 917
Bse1I ACTGG 3 cut(s) 405, 655, 851
BseBI CCWGG 1 cut(s) 767
BseCI ATCGAT 1 cut(s) 690
BseDI CCNNGG 3 cut(s) 765, 1095, 1103
BseGI GGATG 4 cut(s) 796, 901, 1069, 1195
BseLI CCNNNNNNNGG 3 cut(s) 455, 724, 917
BseMII CTCAG 1 cut(s) 733
BseNI ACTGG 3 cut(s) 405, 655, 851
BseRI GAGGAG 3 cut(s) 369, 435, 1253
BseXI GCAGC 1 cut(s) 1189
BseYI CCCAGC 1 cut(s) 179
BsgI GTGCAG 2 cut(s) 1110, 1248
BshNI GGYRCC 1 cut(s) 847
BshVI ATCGAT 1 cut(s) 690
BsiHKAI GWGCWC 1 cut(s) 819
BsiSI CCGG 2 cut(s) 800, 1186
BslFI GGGAC 2 cut(s) 356, 748
BslI CCNNNNNNNGG 3 cut(s) 455, 724, 917
BsmAI GTCTC 2 cut(s) 251, 280
BsmBI CGTCTC 1 cut(s) 251
BsmFI GGGAC 2 cut(s) 356, 748
BsmI GAATGC 1 cut(s) 108
Bsp1286I GDGCHC 1 cut(s) 819
Bsp143I GATC 7 cut(s) 199, 286, 331, 580, 826, 927, 1099
Bsp19I CCATGG 1 cut(s) 1103
BspCNI CTCAG 1 cut(s) 732
BspDI ATCGAT 1 cut(s) 690
BspHI TCATGA 1 cut(s) 949
BspLI GGNNCC 4 cut(s) 372, 849, 1101, 1318
BspMI ACCTGC 1 cut(s) 919
BspPI GGATC 3 cut(s) 922, 1094, 1107
BspT107I GGYRCC 1 cut(s) 847
BsrI ACTGG 3 cut(s) 405, 655, 851
BssECI CCNNGG 3 cut(s) 765, 1095, 1103
BssMI GATC 7 cut(s) 199, 286, 331, 580, 826, 927, 1099
BssNAI GTATAC 1 cut(s) 908
BssT1I CCWWGG 1 cut(s) 1103
Bst1107I GTATAC 1 cut(s) 908
Bst2UI CCWGG 1 cut(s) 767
Bst4CI ACNGT 4 cut(s) 173, 647, 1043, 1159
Bst6I CTCTTC 2 cut(s) 283, 1113
BstBAI YACGTR 2 cut(s) 13, 438
BstC8I GCNNGC 1 cut(s) 975
BstDEI CTNAG 3 cut(s) 450, 719, 837
BstDSI CCRYGG 1 cut(s) 1103
BstENI CCTNNNNNAGG 1 cut(s) 453
BstF5I GGATG 4 cut(s) 796, 901, 1069, 1195
BstKTI GATC 7 cut(s) 202, 289, 334, 583, 829, 930, 1102
BstMAI GTCTC 2 cut(s) 251, 280
BstMBI GATC 7 cut(s) 199, 286, 331, 580, 826, 927, 1099
BstMWI GCNNNNNNNGC 2 cut(s) 610, 979
BstNI CCWGG 1 cut(s) 767
BstNSI RCATGY 1 cut(s) 70
BstSCI CCNGG 2 cut(s) 765, 1185
BstSNI TACGTA 1 cut(s) 438
BstV1I GCAGC 1 cut(s) 1189
BstV2I GAAGAC 1 cut(s) 558
BstX2I RGATCY 1 cut(s) 1099
BstYI RGATCY 1 cut(s) 1099
BstZ17I GTATAC 1 cut(s) 908
Bsu15I ATCGAT 1 cut(s) 690
BsuTUI ATCGAT 1 cut(s) 690
BtgI CCRYGG 1 cut(s) 1103
BtsCI GGATG 4 cut(s) 796, 901, 1069, 1195
BtsI GCAGTG 2 cut(s) 300, 1083
BtsIMutI CAGTG 3 cut(s) 300, 398, 1083
BveI ACCTGC 1 cut(s) 919
Cac8I GCNNGC 1 cut(s) 975
CciI TCATGA 1 cut(s) 949
Cfr13I GGNCC 4 cut(s) 102, 370, 511, 1081
ClaI ATCGAT 1 cut(s) 690
Csp6I GTAC 5 cut(s) 545, 648, 676, 1210, 1270
CviAII CATG 8 cut(s) 67, 584, 950, 1025, 1104, 1177, 1291, 1321
CviQI GTAC 5 cut(s) 545, 648, 676, 1210, 1270
DdeI CTNAG 3 cut(s) 450, 719, 837
DpnI GATC 7 cut(s) 201, 288, 333, 582, 828, 929, 1101
DpnII GATC 7 cut(s) 199, 286, 331, 580, 826, 927, 1099
Eam1104I CTCTTC 2 cut(s) 283, 1113
EarI CTCTTC 2 cut(s) 283, 1113
Eco105I TACGTA 1 cut(s) 438
Eco130I CCWWGG 1 cut(s) 1103
Eco47I GGWCC 4 cut(s) 102, 370, 511, 1081
Eco57I CTGAAG 1 cut(s) 437
EcoNI CCTNNNNNAGG 1 cut(s) 453
EcoO109I RGGNCCY 2 cut(s) 370, 511
EcoRI GAATTC 1 cut(s) 707
EcoRII CCWGG 1 cut(s) 765
EcoT14I CCWWGG 1 cut(s) 1103
ErhI CCWWGG 1 cut(s) 1103
Esp3I CGTCTC 1 cut(s) 251
FaeI CATG 8 cut(s) 70, 587, 953, 1028, 1107, 1180, 1294, 1324
FalI AAGNNNNNCTT 2 cut(s) 1145, 1177
FaqI GGGAC 2 cut(s) 356, 748
FatI CATG 8 cut(s) 66, 583, 949, 1024, 1103, 1176, 1290, 1320
FauNDI CATATG 1 cut(s) 134
FbaI TGATCA 1 cut(s) 580
FblI GTMKAC 2 cut(s) 481, 907
Fnu4HI GCNGC 1 cut(s) 1203
FokI GGATG 4 cut(s) 783, 908, 1076, 1202
Fsp4HI GCNGC 1 cut(s) 1203
FspBI CTAG 2 cut(s) 155, 1004
GluI GCNGC 1 cut(s) 1203
GsaI CCCAGC 1 cut(s) 183
HapII CCGG 2 cut(s) 800, 1186
Hin1II CATG 8 cut(s) 70, 587, 953, 1028, 1107, 1180, 1294, 1324
HincII GTYRAC 1 cut(s) 84
HindII GTYRAC 1 cut(s) 84
HindIII AAGCTT 2 cut(s) 602, 1283
HinfI GANTC 5 cut(s) 221, 295, 425, 841, 1121
HpaI GTTAAC 1 cut(s) 84
HpaII CCGG 2 cut(s) 800, 1186
HphI GGTGA 1 cut(s) 987
Hpy166II GTNNAC 5 cut(s) 8, 84, 482, 908, 1081
Hpy188I TCNGA 4 cut(s) 424, 722, 927, 1060
Hpy188III TCNNGA 8 cut(s) 155, 218, 503, 950, 988, 1004, 1153, 1275
Hpy8I GTNNAC 5 cut(s) 8, 84, 482, 908, 1081
HpyAV CCTTC 1 cut(s) 85
HpyCH4III ACNGT 4 cut(s) 173, 647, 1043, 1159
HpyCH4IV ACGT 4 cut(s) 12, 318, 437, 1312
HpyF10VI GCNNNNNNNGC 2 cut(s) 610, 979
HpyF3I CTNAG 3 cut(s) 450, 719, 837
HpySE526I ACGT 4 cut(s) 12, 318, 437, 1312
Hsp92II CATG 8 cut(s) 70, 587, 953, 1028, 1107, 1180, 1294, 1324
Ksp22I TGATCA 1 cut(s) 580
KspAI GTTAAC 1 cut(s) 84
Kzo9I GATC 7 cut(s) 199, 286, 331, 580, 826, 927, 1099
LmnI GCTCC 1 cut(s) 448
Lsp1109I GCAGC 1 cut(s) 1189
LweI GCATC 4 cut(s) 40, 82, 682, 886
MaeI CTAG 2 cut(s) 155, 1004
MaeII ACGT 4 cut(s) 12, 318, 437, 1312
MaeIII GTNAC 2 cut(s) 1043, 1143
MalI GATC 7 cut(s) 201, 288, 333, 582, 828, 929, 1101
MboI GATC 7 cut(s) 199, 286, 331, 580, 826, 927, 1099
MboII GAAGA 9 cut(s) 38, 139, 270, 420, 563, 938, 1079, 1130, 1231
MfeI CAATTG 2 cut(s) 492, 1337
MflI RGATCY 1 cut(s) 1099
MhlI GDGCHC 1 cut(s) 819
MlyI GAGTC 1 cut(s) 1130
MmeI TCCRAC 2 cut(s) 272, 402
MroXI GAANNNNTTC 1 cut(s) 527
MseI TTAA 5 cut(s) 83, 255, 342, 629, 1163
MslI CAYNNNNRTG 1 cut(s) 822
MspI CCGG 2 cut(s) 800, 1186
MspR9I CCNGG 2 cut(s) 767, 1187
MunI CAATTG 2 cut(s) 492, 1337
Mva1269I GAATGC 1 cut(s) 108
MvaI CCWGG 1 cut(s) 767
MwoI GCNNNNNNNGC 2 cut(s) 610, 979
NciI CCSGG 1 cut(s) 1187
NcoI CCATGG 1 cut(s) 1103
NdeI CATATG 1 cut(s) 134
NdeII GATC 7 cut(s) 199, 286, 331, 580, 826, 927, 1099
NlaIII CATG 8 cut(s) 70, 587, 953, 1028, 1107, 1180, 1294, 1324
NlaIV GGNNCC 4 cut(s) 372, 849, 1101, 1318
NmeAIII GCCGAG 1 cut(s) 762
NmuCI GTSAC 1 cut(s) 1143
NspI RCATGY 1 cut(s) 70
OliI CACNNNNGTG 1 cut(s) 822
PagI TCATGA 1 cut(s) 949
PcsI WCGNNNNNNNCGW 1 cut(s) 18
PctI GAATGC 1 cut(s) 108
PdmI GAANNNNTTC 1 cut(s) 527
PfeI GAWTC 4 cut(s) 221, 295, 425, 841
PkrI GCNGC 1 cut(s) 1204
PleI GAGTC 1 cut(s) 1129
PpsI GAGTC 1 cut(s) 1129
Ppu21I YACGTR 2 cut(s) 13, 438
PpuMI RGGWCCY 2 cut(s) 370, 511
Psp1406I AACGTT 1 cut(s) 318
Psp5II RGGWCCY 2 cut(s) 370, 511
Psp6I CCWGG 1 cut(s) 765
PspFI CCCAGC 1 cut(s) 179
PspGI CCWGG 1 cut(s) 765
PspN4I GGNNCC 4 cut(s) 372, 849, 1101, 1318
PspPI GGNCC 4 cut(s) 102, 370, 511, 1081
PspPPI RGGWCCY 2 cut(s) 370, 511
PsuI RGATCY 1 cut(s) 1099
RsaI GTAC 5 cut(s) 546, 649, 677, 1211, 1271
RsaNI GTAC 5 cut(s) 545, 648, 676, 1210, 1270
RseI CAYNNNNRTG 1 cut(s) 822
SaqAI TTAA 5 cut(s) 83, 255, 342, 629, 1163
SatI GCNGC 1 cut(s) 1203
Sau3AI GATC 7 cut(s) 199, 286, 331, 580, 826, 927, 1099
Sau96I GGNCC 4 cut(s) 102, 370, 511, 1081
ScaI AGTACT 3 cut(s) 649, 677, 1211
SchI GAGTC 1 cut(s) 1130
ScrFI CCNGG 2 cut(s) 767, 1187
SduI GDGCHC 1 cut(s) 819
SfaNI GCATC 4 cut(s) 40, 82, 682, 886
SinI GGWCC 4 cut(s) 102, 370, 511, 1081
SmiMI CAYNNNNRTG 1 cut(s) 822
SmlI CTYRAG 5 cut(s) 473, 556, 986, 1151, 1273
SmoI CTYRAG 5 cut(s) 473, 556, 986, 1151, 1273
SnaBI TACGTA 1 cut(s) 438
SspMI CTAG 2 cut(s) 155, 1004
StyD4I CCNGG 2 cut(s) 765, 1185
StyI CCWWGG 1 cut(s) 1103
TaaI ACNGT 4 cut(s) 173, 647, 1043, 1159
TaiI ACGT 4 cut(s) 15, 321, 440, 1315
TaqI TCGA 2 cut(s) 217, 690
TatI WGTACW 4 cut(s) 647, 675, 1209, 1269
TfiI GAWTC 4 cut(s) 221, 295, 425, 841
Tru1I TTAA 5 cut(s) 83, 255, 342, 629, 1163
Tru9I TTAA 5 cut(s) 83, 255, 342, 629, 1163
TscAI CASTG 3 cut(s) 307, 405, 1083
TseFI GTSAC 1 cut(s) 1143
TseI GCWGC 1 cut(s) 1202
Tsp45I GTSAC 1 cut(s) 1143
TspDTI ATGAA 5 cut(s) 39, 938, 1041, 1080, 1165
TspRI CASTG 3 cut(s) 307, 405, 1083
VpaK11BI GGWCC 4 cut(s) 102, 370, 511, 1081
XagI CCTNNNNNAGG 1 cut(s) 453
XapI RAATTY 2 cut(s) 707, 1295
XbaI TCTAGA 2 cut(s) 154, 1003
XceI RCATGY 1 cut(s) 70
XmiI GTMKAC 2 cut(s) 481, 907
XmnI GAANNNNTTC 1 cut(s) 527
XspI CTAG 2 cut(s) 155, 1004
ZrmI AGTACT 3 cut(s) 649, 677, 1211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.