Rw5G018260

domain in FBox and BRCT domain containing plant proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0000062
Physical Location & Seq
Forward (+)
23613164 .. 23615650
2487 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G018260.1

Sequence Viewer

Length: 1440 bp
ATGAATTCGAAATCAAAGCGTCAGTTAAGTGTTCCAGATAGGATCAGTGGATTACCAGATGCACTTCTTTGGCACATACTTTCGTTTGTTGAAACACAAGATGCTGTGAGGACCTGTGTTCTGTCTACAAGATGGAAGAACATATGGGCGTCTGTTCCCACCTTAGATTTTGACCAGACAAGTTTTCATGACCCTGATAAATTTTGGGCGTTTGTTGATTATGTACTTCTATTCCGTCACTCATCGAACATAAAAAAATTTCGGCTTTATATGAAGGGCAAGGATGTGGACCACTCTCGTATTAATGCTTGGATCAACACTGCCATTAGGCGCAACGTTGTTGAACTTGATCTCTTAGCTGGGCATCCATTTCTATCCAAGCTTGTTGAGTTGCCTAAAAGCCTCTTCATGTGTAAAACACTGGTAATCTTGAGGTTGAGATCACAATTTATTACCAATGTTCCTGCATCAGGGTGCTTCCCGAGCCTAAAGTTCCTCCATGTTACATTTTATTCATATGTTATTGAATCAATGCGTGAGCTTTTCTCCAACTGTCCGATACTTGAAGATTTGACTGTGGATGGTCTTCTTCTATACGGTGTTTCCTTGAATTTAAACATTTCTGTCCCTGCACTGAAGACGTTAAGAATATGGTTTGATAAAGATGGTGATGATAATGGTGCCAGCAGCTATTTTATTAATTGCCCAAAGCTTGAAAATCTTGATGTGATAGAGGAGTTTTCGTCAACATATTGTTGGGGGAAAGCAAAATCCCTAGTCAAAGCCAGTATTTGTCTACCTCAGCATTGTTCAAATCGACAGCCTAGTTTTTACCGTGTGAAATCACTTTTGGCAGGAATATCCAGTGTTACAGATTTATGTCTTTCAGCTCATTGTTTTGAGGTTGGTTCTCTGCCTGCTTATGAAAATTTGAGACGGTTGAAGCTGGTGATTCAAGATTGCTTTTGCTGGGAGTTGCTTACAAAGTTACTCAAAAGATCACCTATCCTGGAGTCTCTTGTCTTAGAATGTGAAGTCGGCGGTTGTCCTCAAGAAGACTCTGATAATGACGAAGGGTCAGTGTATGAAGAAGACTCCGAGAGTGAAGAGGGCTCTGAGCATGAAGAGGGTTCAGAGAATGAACGAAGGTCAGATCATGAAGAAGGCTCAGTGAATGAACAAGGGTCAGAGCATCAATGGAATCCTCCAGATTGTGTGCCTAAATGTTGTTTGTTACACCTCAAGATTGTCTCCATAAGGGGATTCATGGGAGAACGTGATGAGTTGGAAGTGGCAAAGTACTTGCTGAAGTATGGTCAAGTTTTGAATAAGATGACTATATCTATGGATCATCTTGATGTTAATGAAAAAGAGAAGATTTACAAGGAGTTTTTAATGGTTCCAAGGGGTTCAAGAACTAGTATAGTTGAATTTATCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

479

Amino Acids

54.74

Weight (kDa)

5.56

Isoelectric Point (pI)

49.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 53 2e-07 F-box domain
LRR_At1g61320_AtMIF1 PF23622 79 - 374 1.6e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 102 - 248 5.7e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 403 - 447 3.7e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 680
AccI GTMKAC 2 cut(s) 125, 796
AciI CCGC 1 cut(s) 1041
AclI AACGTT 1 cut(s) 336
AclWI GGATC 3 cut(s) 50, 320, 1356
AcsI RAATTY 6 cut(s) 4, 200, 257, 610, 928, 1430
AcuI CTGAAG 2 cut(s) 656, 1328
AcyI GRCGYC 1 cut(s) 149
AfaI GTAC 2 cut(s) 225, 1301
AfiI CCNNNNNNNGG 1 cut(s) 470
AhdI GACNNNNNGTC 1 cut(s) 1075
AhlI ACTAGT 1 cut(s) 1418
AjnI CCWGG 1 cut(s) 1008
AjuI GAANNNNNNNTTGG 2 cut(s) 833, 865
AluBI AGCT 7 cut(s) 359, 382, 541, 690, 712, 890, 946
AluI AGCT 7 cut(s) 359, 382, 541, 690, 712, 890, 946
Alw26I GTCTC 3 cut(s) 928, 1020, 1255
AlwI GGATC 3 cut(s) 50, 320, 1356
Ama87I CYCGRG 1 cut(s) 481
ApeKI GCWGC 1 cut(s) 687
ApoI RAATTY 6 cut(s) 4, 200, 257, 610, 928, 1430
AseI ATTAAT 2 cut(s) 303, 699
AspLEI GCGC 1 cut(s) 333
AspS9I GGNCC 2 cut(s) 111, 289
AsuHPI GGTGA 3 cut(s) 680, 961, 993
AsuII TTCGAA 1 cut(s) 8
AvaI CYCGRG 1 cut(s) 481
AvaII GGWCC 2 cut(s) 111, 289
BanI GGYRCC 1 cut(s) 680
BanII GRGCYC 1 cut(s) 1115
BbsI GAAGAC 4 cut(s) 578, 644, 1062, 1098
BbvCI CCTCAGC 1 cut(s) 801
BbvI GCAGC 1 cut(s) 699
BccI CCATC 3 cut(s) 126, 575, 659
BciT130I CCWGG 1 cut(s) 1010
BcoDI GTCTC 3 cut(s) 928, 1020, 1255
BcuI ACTAGT 1 cut(s) 1418
BfaI CTAG 4 cut(s) 776, 825, 1419, 1438
BisI GCNGC 1 cut(s) 688
BlsI GCNGC 1 cut(s) 689
BmcAI AGTACT 1 cut(s) 1301
Bme1390I CCNGG 1 cut(s) 1010
Bme18I GGWCC 2 cut(s) 111, 289
BmeRI GACNNNNNGTC 1 cut(s) 1075
BmeT110I CYCGRG 1 cut(s) 481
BmgT120I GGNCC 2 cut(s) 111, 289
BmiI GGNNCC 2 cut(s) 682, 1401
BmrFI CCNGG 1 cut(s) 1010
BmsI GCATC 5 cut(s) 49, 91, 373, 476, 1201
BpiI GAAGAC 4 cut(s) 578, 644, 1062, 1098
BplI GAGNNNNNCTC 2 cut(s) 530, 562
BpmI CTGGAG 2 cut(s) 1031, 1191
Bpu10I CCTNAGC 1 cut(s) 801
Bpu14I TTCGAA 1 cut(s) 8
BpuEI CTTGAG 3 cut(s) 451, 1035, 1226
BsaHI GRCGYC 1 cut(s) 149
BsaJI CCNNGG 1 cut(s) 1403
BsaXI ACNNNNNCTCC 2 cut(s) 728, 758
Bsc4I CCNNNNNNNGG 1 cut(s) 470
Bse1I ACTGG 3 cut(s) 426, 786, 864
BseBI CCWGG 1 cut(s) 1010
BseDI CCNNGG 1 cut(s) 1403
BseGI GGATG 3 cut(s) 289, 364, 586
BseLI CCNNNNNNNGG 1 cut(s) 470
BseMII CTCAG 3 cut(s) 815, 1107, 1182
BseNI ACTGG 3 cut(s) 426, 786, 864
BseRI GAGGAG 1 cut(s) 749
BseXI GCAGC 1 cut(s) 699
BseYI CCCAGC 2 cut(s) 359, 969
BsgI GTGCAG 1 cut(s) 615
BshNI GGYRCC 1 cut(s) 680
BsiHKCI CYCGRG 1 cut(s) 481
BslFI GGGAC 1 cut(s) 611
BslI CCNNNNNNNGG 1 cut(s) 470
BsmAI GTCTC 3 cut(s) 928, 1020, 1255
BsmBI CGTCTC 1 cut(s) 928
BsmFI GGGAC 1 cut(s) 611
BsoBI CYCGRG 1 cut(s) 481
Bsp119I TTCGAA 1 cut(s) 8
Bsp1286I GDGCHC 1 cut(s) 1115
Bsp143I GATC 7 cut(s) 42, 312, 349, 440, 998, 1153, 1348
BspACI CCGC 1 cut(s) 1041
BspCNI CTCAG 3 cut(s) 814, 1108, 1181
BspHI TCATGA 2 cut(s) 187, 1156
BspLI GGNNCC 2 cut(s) 682, 1401
BspPI GGATC 3 cut(s) 50, 320, 1356
BspT104I TTCGAA 1 cut(s) 8
BspT107I GGYRCC 1 cut(s) 680
BsrI ACTGG 3 cut(s) 426, 786, 864
BssECI CCNNGG 1 cut(s) 1403
BssMI GATC 7 cut(s) 42, 312, 349, 440, 998, 1153, 1348
BssNI GRCGYC 1 cut(s) 149
BssT1I CCWWGG 1 cut(s) 1403
Bst2UI CCWGG 1 cut(s) 1010
Bst4CI ACNGT 5 cut(s) 554, 577, 599, 836, 939
Bst6I CTCTTC 3 cut(s) 410, 1101, 1119
BstACI GRCGYC 1 cut(s) 149
BstBI TTCGAA 1 cut(s) 8
BstC8I GCNNGC 2 cut(s) 685, 918
BstDEI CTNAG 6 cut(s) 163, 355, 801, 1024, 1116, 1168
BstENI CCTNNNNNAGG 1 cut(s) 468
BstF5I GGATG 3 cut(s) 289, 364, 586
BstHHI GCGC 1 cut(s) 333
BstKTI GATC 7 cut(s) 45, 315, 352, 443, 1001, 1156, 1351
BstMAI GTCTC 3 cut(s) 928, 1020, 1255
BstMBI GATC 7 cut(s) 42, 312, 349, 440, 998, 1153, 1348
BstMWI GCNNNNNNNGC 1 cut(s) 483
BstNI CCWGG 1 cut(s) 1010
BstSCI CCNGG 1 cut(s) 1008
BstV1I GCAGC 1 cut(s) 699
BstV2I GAAGAC 4 cut(s) 578, 644, 1062, 1098
BtsCI GGATG 3 cut(s) 289, 364, 586
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 7 cut(s) 52, 318, 419, 632, 871, 1086, 1176
Cac8I GCNNGC 2 cut(s) 685, 918
CciI TCATGA 2 cut(s) 187, 1156
CfoI GCGC 1 cut(s) 333
Cfr13I GGNCC 2 cut(s) 111, 289
CseI GACGC 2 cut(s) 8, 138
Csp6I GTAC 2 cut(s) 224, 1300
CviAII CATG 6 cut(s) 188, 409, 500, 1121, 1157, 1267
CviQI GTAC 2 cut(s) 224, 1300
DdeI CTNAG 6 cut(s) 163, 355, 801, 1024, 1116, 1168
DpnI GATC 7 cut(s) 44, 314, 351, 442, 1000, 1155, 1350
DpnII GATC 7 cut(s) 42, 312, 349, 440, 998, 1153, 1348
DraI TTTAAA 1 cut(s) 615
DriI GACNNNNNGTC 1 cut(s) 1075
Eam1104I CTCTTC 3 cut(s) 410, 1101, 1119
Eam1105I GACNNNNNGTC 1 cut(s) 1075
EarI CTCTTC 3 cut(s) 410, 1101, 1119
Eco130I CCWWGG 1 cut(s) 1403
Eco24I GRGCYC 1 cut(s) 1115
Eco47I GGWCC 2 cut(s) 111, 289
Eco57I CTGAAG 2 cut(s) 656, 1328
Eco88I CYCGRG 1 cut(s) 481
EcoNI CCTNNNNNAGG 1 cut(s) 468
EcoO109I RGGNCCY 1 cut(s) 111
EcoRI GAATTC 1 cut(s) 4
EcoRII CCWGG 1 cut(s) 1008
EcoT14I CCWWGG 1 cut(s) 1403
EcoT38I GRGCYC 1 cut(s) 1115
ErhI CCWWGG 1 cut(s) 1403
Esp3I CGTCTC 1 cut(s) 928
FaeI CATG 6 cut(s) 191, 412, 503, 1124, 1160, 1270
FaqI GGGAC 1 cut(s) 611
FatI CATG 6 cut(s) 187, 408, 499, 1120, 1156, 1266
FauNDI CATATG 2 cut(s) 143, 517
FblI GTMKAC 2 cut(s) 125, 796
Fnu4HI GCNGC 1 cut(s) 688
FokI GGATG 3 cut(s) 296, 351, 593
FriOI GRGCYC 1 cut(s) 1115
Fsp4HI GCNGC 1 cut(s) 688
FspBI CTAG 4 cut(s) 776, 825, 1419, 1438
GlaI GCGC 1 cut(s) 332
GluI GCNGC 1 cut(s) 688
GsaI CCCAGC 2 cut(s) 363, 973
GsuI CTGGAG 2 cut(s) 1031, 1191
HgaI GACGC 2 cut(s) 8, 138
HhaI GCGC 1 cut(s) 333
Hin1I GRCGYC 1 cut(s) 149
Hin1II CATG 6 cut(s) 191, 412, 503, 1124, 1160, 1270
Hin6I GCGC 1 cut(s) 331
HinP1I GCGC 1 cut(s) 331
HincII GTYRAC 1 cut(s) 747
HindII GTYRAC 1 cut(s) 747
HindIII AAGCTT 2 cut(s) 380, 710
HinfI GANTC 7 cut(s) 527, 952, 1013, 1058, 1094, 1201, 1263
HphI GGTGA 3 cut(s) 680, 961, 993
Hpy166II GTNNAC 4 cut(s) 126, 289, 747, 797
Hpy188I TCNGA 7 cut(s) 558, 1063, 1099, 1117, 1135, 1153, 1189
Hpy8I GTNNAC 4 cut(s) 126, 289, 747, 797
HpyAV CCTTC 4 cut(s) 268, 1067, 1140, 1157
HpyCH4III ACNGT 5 cut(s) 554, 577, 599, 836, 939
HpyCH4IV ACGT 3 cut(s) 336, 641, 1276
HpyCH4V TGCA 3 cut(s) 62, 467, 632
HpyF10VI GCNNNNNNNGC 1 cut(s) 483
HpyF3I CTNAG 6 cut(s) 163, 355, 801, 1024, 1116, 1168
HpySE526I ACGT 3 cut(s) 336, 641, 1276
Hsp92I GRCGYC 1 cut(s) 149
Hsp92II CATG 6 cut(s) 191, 412, 503, 1124, 1160, 1270
HspAI GCGC 1 cut(s) 331
Kzo9I GATC 7 cut(s) 42, 312, 349, 440, 998, 1153, 1348
Lsp1109I GCAGC 1 cut(s) 699
LweI GCATC 5 cut(s) 49, 91, 373, 476, 1201
MaeI CTAG 4 cut(s) 776, 825, 1419, 1438
MaeII ACGT 3 cut(s) 336, 641, 1276
MaeIII GTNAC 5 cut(s) 236, 502, 868, 987, 1233
MalI GATC 7 cut(s) 44, 314, 351, 442, 1000, 1155, 1350
MboI GATC 7 cut(s) 42, 312, 349, 440, 998, 1153, 1348
MhlI GDGCHC 1 cut(s) 1115
MluCI AATT 8 cut(s) 4, 200, 257, 446, 610, 700, 928, 1430
MlyI GAGTC 3 cut(s) 1022, 1052, 1088
MmeI TCCRAC 2 cut(s) 573, 1266
MseI TTAA 7 cut(s) 26, 303, 614, 644, 699, 1362, 1394
MslI CAYNNNNRTG 2 cut(s) 472, 1356
MspR9I CCNGG 1 cut(s) 1010
MvaI CCWGG 1 cut(s) 1010
MwoI GCNNNNNNNGC 1 cut(s) 483
NdeI CATATG 2 cut(s) 143, 517
NdeII GATC 7 cut(s) 42, 312, 349, 440, 998, 1153, 1348
NlaIII CATG 6 cut(s) 191, 412, 503, 1124, 1160, 1270
NlaIV GGNNCC 2 cut(s) 682, 1401
NmuCI GTSAC 1 cut(s) 236
NspV TTCGAA 1 cut(s) 8
PagI TCATGA 2 cut(s) 187, 1156
PfeI GAWTC 4 cut(s) 527, 952, 1201, 1263
PfoI TCCNGGA 1 cut(s) 1008
PkrI GCNGC 1 cut(s) 689
PleI GAGTC 3 cut(s) 1021, 1052, 1088
PpsI GAGTC 3 cut(s) 1021, 1052, 1088
PpuMI RGGWCCY 1 cut(s) 111
PshBI ATTAAT 2 cut(s) 303, 699
Psp1406I AACGTT 1 cut(s) 336
Psp5II RGGWCCY 1 cut(s) 111
Psp6I CCWGG 1 cut(s) 1008
PspFI CCCAGC 2 cut(s) 359, 969
PspGI CCWGG 1 cut(s) 1008
PspN4I GGNNCC 2 cut(s) 682, 1401
PspPI GGNCC 2 cut(s) 111, 289
PspPPI RGGWCCY 1 cut(s) 111
RsaI GTAC 2 cut(s) 225, 1301
RsaNI GTAC 2 cut(s) 224, 1300
RseI CAYNNNNRTG 2 cut(s) 472, 1356
SaqAI TTAA 7 cut(s) 26, 303, 614, 644, 699, 1362, 1394
SatI GCNGC 1 cut(s) 688
Sau3AI GATC 7 cut(s) 42, 312, 349, 440, 998, 1153, 1348
Sau96I GGNCC 2 cut(s) 111, 289
ScaI AGTACT 1 cut(s) 1301
SchI GAGTC 3 cut(s) 1022, 1052, 1088
ScrFI CCNGG 1 cut(s) 1010
SduI GDGCHC 1 cut(s) 1115
SfaNI GCATC 5 cut(s) 49, 91, 373, 476, 1201
SfuI TTCGAA 1 cut(s) 8
SinI GGWCC 2 cut(s) 111, 289
SmiMI CAYNNNNRTG 2 cut(s) 472, 1356
SmlI CTYRAG 3 cut(s) 430, 1050, 1241
SmoI CTYRAG 3 cut(s) 430, 1050, 1241
SpeI ACTAGT 1 cut(s) 1418
Sse9I AATT 8 cut(s) 4, 200, 257, 446, 610, 700, 928, 1430
SsiI CCGC 1 cut(s) 1041
SspMI CTAG 4 cut(s) 776, 825, 1419, 1438
StyD4I CCNGG 1 cut(s) 1008
StyI CCWWGG 1 cut(s) 1403
TaaI ACNGT 5 cut(s) 554, 577, 599, 836, 939
TaiI ACGT 3 cut(s) 339, 644, 1279
TaqI TCGA 3 cut(s) 8, 245, 817
TasI AATT 8 cut(s) 4, 200, 257, 446, 610, 700, 928, 1430
TatI WGTACW 2 cut(s) 223, 1299
TfiI GAWTC 4 cut(s) 527, 952, 1201, 1263
Tru1I TTAA 7 cut(s) 26, 303, 614, 644, 699, 1362, 1394
Tru9I TTAA 7 cut(s) 26, 303, 614, 644, 699, 1362, 1394
TscAI CASTG 7 cut(s) 52, 325, 426, 639, 871, 1086, 1176
TseFI GTSAC 1 cut(s) 236
TseI GCWGC 1 cut(s) 687
Tsp45I GTSAC 1 cut(s) 236
TspGWI ACGGA 1 cut(s) 224
TspRI CASTG 7 cut(s) 52, 325, 426, 639, 871, 1086, 1176
VpaK11BI GGWCC 2 cut(s) 111, 289
VspI ATTAAT 2 cut(s) 303, 699
XagI CCTNNNNNAGG 1 cut(s) 468
XapI RAATTY 6 cut(s) 4, 200, 257, 610, 928, 1430
XmiI GTMKAC 2 cut(s) 125, 796
XspI CTAG 4 cut(s) 776, 825, 1419, 1438
ZrmI AGTACT 1 cut(s) 1301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.