Rroxscaffold_1G00051210

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000062
Physical Location & Seq
Reverse (-)
71861858 .. 71864821
2964 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00051210.1

Sequence Viewer

Length: 1368 bp
ATGGTTCTGCAATCCAACAGTCAACTGAGGGTTCAAGATAGGGTCAGTGAACTGCCAGATGCAGTTTTGTGTCACATACTTAGTTTCCTTGGACCAGATTATGCAAAGTGTGCTGTCAGGACCAGTATTTTGTCTAAGAGATGGAAGAACATGTGGGCCTGTGCTCCCAATGTGAACTTGAACAGTCGAGATTTCTCCTCCTCTGCTGATTTCATAGCGTTTGCTGATCGTTTACTTCTTCTTCGTGACTCGTCAACCATTCAAAAGTTGTATCTTCATTTCATTCTTTGCTCTGCTGAAGATTTCTCTCGTGTTGATGCTTGGATTCGCACTGCTATTAGGTGTAATGTGGTGGAGCTTGATCTTTGTGTCTATTCAGATGGAGGTGAGGTGTTTGAGTTGCCCAAAAGCCTTTTCACTTGCAAAACACTCATGTCTTTGAAGCTGATGTCTAATTTTGTTATCAACATGCCAACATCAGTGTGTTTCCCAAGTCTCAAATTCTTCTACGTTACTGTCCCTACTGATAAAGACTCCATGGATTTTTCTCATTGCCCTGCGCTTGAACATTTAGCTATAGATGGATCTCATGGAGAGGATGGTGTTTATCTCAACATCTCTGTGTCTGAACTGAAGACGTTGAAGATAACTAGTAAAGATATATACAGTGTTAACATCAATGCCCCAAAACTTGAAAAACTTGATCTCAAGGATTCGGTTTTGTCAGATTATAACTTGGAGAATACAAAATCCCTAGTTGAAGCTAATATTTATCTCTATCACGAAGAGGAAGAAGGCGACGAAGAGGATGCCGCTGTCTGTGCAACTAATATCTTGGAAGGAATTTCCGGTGTTAAATATCTGTTCCTTTCCTCTCGTATCTGTGAGAATTGTTCTGTGCCTGCTTTTGATAATTTGAGCAAATTGACGCTAGCTCTTCATAGCGGCTGTTATGGGTGGGGAATTCTAACGATGTTGTTGGAGAGAGCATCAAATCTAGAATGCCTTGTGTTGGAACATGACCATCATCATTATCCCGCCTATTGTGGTGAATCAGAGTCGGTGATTGAACTTGAAGATCCTATTGAAGTTCCCCCTGAAGTAGTTACATGGAGTCCACCAGAGTCTGTTCCTAAATGTGTGTCGTCACACCTCAAGAGTATCTCCTTAAAGGGATTCCAGGGAAAGCATTTCTCGGGACATGTAGATGAAATGGAAGTGCTCAAGTATTTACTAGAGAATGGTCAAGTTTTGAAGGAGATGACAATTTACACTGAGTTTCTGGAACAGGAGTTGTACGGTGAACTTTCAAGGTTTGAATGGGGTTCAGAGACTTGTCAAGTTGAGATTATCAGCAAGGGATCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

455

Amino Acids

51.16

Weight (kDa)

4.85

Isoelectric Point (pI)

43.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 87 - 345 3.1e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 105 - 243 1.6e-11 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 374 - 423 2.2e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 732
AciI CCGC 3 cut(s) 813, 945, 1038
AclWI GGATC 2 cut(s) 592, 1073
AcsI RAATTY 3 cut(s) 500, 843, 963
AcuI CTGAAG 3 cut(s) 318, 653, 1119
AfaI GTAC 1 cut(s) 1298
AfiI CCNNNNNNNGG 1 cut(s) 1012
AflIII ACRYGT 2 cut(s) 150, 1201
AhlI ACTAGT 1 cut(s) 650
AjnI CCWGG 1 cut(s) 1179
AjuI GAANNNNNNNTTGG 2 cut(s) 398, 430
AluBI AGCT 5 cut(s) 358, 445, 575, 764, 935
AluI AGCT 5 cut(s) 358, 445, 575, 764, 935
Alw21I GWGCWC 2 cut(s) 166, 1224
Alw26I GTCTC 2 cut(s) 500, 1325
AlwI GGATC 2 cut(s) 592, 1073
AlwNI CAGNNNCTG 1 cut(s) 1127
Ama87I CYCGRG 1 cut(s) 1195
AoxI GGCC 1 cut(s) 156
ApoI RAATTY 3 cut(s) 500, 843, 963
ArsI GACNNNNNNTTYG 2 cut(s) 112, 144
AspLEI GCGC 1 cut(s) 562
AspS9I GGNCC 3 cut(s) 92, 120, 156
AsuHPI GGTGA 4 cut(s) 398, 1061, 1075, 1313
AsuNHI GCTAGC 1 cut(s) 931
AvaI CYCGRG 1 cut(s) 1195
AvaII GGWCC 2 cut(s) 92, 120
BauI CACGAG 1 cut(s) 309
BbsI GAAGAC 1 cut(s) 641
Bbv12I GWGCWC 2 cut(s) 166, 1224
BccI CCATC 5 cut(s) 135, 374, 575, 593, 1032
BcgI CGANNNNNNTGC 2 cut(s) 791, 825
BciT130I CCWGG 1 cut(s) 1181
BcoDI GTCTC 2 cut(s) 500, 1325
BcuI ACTAGT 1 cut(s) 650
BfaI CTAG 5 cut(s) 651, 755, 932, 998, 1235
BfmI CTRYAG 1 cut(s) 576
BisI GCNGC 2 cut(s) 813, 946
BlsI GCNGC 2 cut(s) 814, 947
Bme1390I CCNGG 1 cut(s) 1181
Bme18I GGWCC 2 cut(s) 92, 120
BmeT110I CYCGRG 1 cut(s) 1195
BmgT120I GGNCC 3 cut(s) 92, 120, 156
BmrFI CCNGG 1 cut(s) 1181
BmsI GCATC 4 cut(s) 49, 307, 799, 998
BmtI GCTAGC 1 cut(s) 935
BpiI GAAGAC 1 cut(s) 641
BpuEI CTTGAG 3 cut(s) 692, 1139, 1208
BsaJI CCNNGG 3 cut(s) 88, 537, 1180
BsaWI WCCGGW 1 cut(s) 848
BsaXI ACNNNNNCTCC 2 cut(s) 375, 405
Bsc4I CCNNNNNNNGG 1 cut(s) 1012
Bse1I ACTGG 1 cut(s) 123
Bse3DI GCAATG 1 cut(s) 550
BseBI CCWGG 1 cut(s) 1181
BseDI CCNNGG 3 cut(s) 88, 537, 1180
BseGI GGATG 2 cut(s) 604, 814
BseLI CCNNNNNNNGG 1 cut(s) 1012
BseMI GCAATG 1 cut(s) 550
BseMII CTCAG 2 cut(s) 17, 1266
BseNI ACTGG 1 cut(s) 123
BseRI GAGGAG 2 cut(s) 187, 190
BshFI GGCC 1 cut(s) 158
BsiHKAI GWGCWC 2 cut(s) 166, 1224
BsiHKCI CYCGRG 1 cut(s) 1195
BsiSI CCGG 1 cut(s) 849
BslFI GGGAC 2 cut(s) 503, 1212
BslI CCNNNNNNNGG 1 cut(s) 1012
BsmAI GTCTC 2 cut(s) 500, 1325
BsmFI GGGAC 2 cut(s) 503, 1212
BsmI GAATGC 1 cut(s) 1007
BsnI GGCC 1 cut(s) 158
BsoBI CYCGRG 1 cut(s) 1195
Bsp1286I GDGCHC 2 cut(s) 166, 1224
Bsp143I GATC 6 cut(s) 226, 361, 584, 703, 1078, 1361
Bsp19I CCATGG 1 cut(s) 537
BspACI CCGC 3 cut(s) 813, 945, 1038
BspANI GGCC 1 cut(s) 158
BspCNI CTCAG 2 cut(s) 18, 1267
BspOI GCTAGC 1 cut(s) 935
BspPI GGATC 2 cut(s) 592, 1073
BspQI GCTCTTC 1 cut(s) 942
BsrDI GCAATG 1 cut(s) 550
BsrI ACTGG 1 cut(s) 123
BssECI CCNNGG 3 cut(s) 88, 537, 1180
BssMI GATC 6 cut(s) 226, 361, 584, 703, 1078, 1361
BssSI CACGAG 1 cut(s) 309
BssT1I CCWWGG 2 cut(s) 88, 537
Bst2BI CACGAG 1 cut(s) 309
Bst2UI CCWGG 1 cut(s) 1181
Bst4CI ACNGT 5 cut(s) 20, 185, 517, 668, 1301
Bst6I CTCTTC 3 cut(s) 780, 798, 942
BstAPI GCANNNNNTGC 1 cut(s) 110
BstC8I GCNNGC 2 cut(s) 903, 933
BstDEI CTNAG 5 cut(s) 26, 80, 135, 1275, 1365
BstDSI CCRYGG 1 cut(s) 537
BstF5I GGATG 2 cut(s) 604, 814
BstHHI GCGC 1 cut(s) 562
BstKTI GATC 6 cut(s) 229, 364, 587, 706, 1081, 1364
BstMAI GTCTC 2 cut(s) 500, 1325
BstMBI GATC 6 cut(s) 226, 361, 584, 703, 1078, 1361
BstMWI GCNNNNNNNGC 2 cut(s) 110, 821
BstNI CCWGG 1 cut(s) 1181
BstNSI RCATGY 3 cut(s) 154, 472, 1205
BstSCI CCNGG 1 cut(s) 1179
BstSFI CTRYAG 1 cut(s) 576
BstV2I GAAGAC 1 cut(s) 641
BstX2I RGATCY 3 cut(s) 584, 1078, 1361
BstYI RGATCY 3 cut(s) 584, 1078, 1361
BsuRI GGCC 1 cut(s) 158
BtgI CCRYGG 1 cut(s) 537
BtsCI GGATG 2 cut(s) 604, 814
BtsI GCAGTG 1 cut(s) 330
BtsIMutI CAGTG 5 cut(s) 52, 330, 486, 673, 1272
Cac8I GCNNGC 2 cut(s) 903, 933
CaiI CAGNNNCTG 1 cut(s) 1127
CfoI GCGC 1 cut(s) 562
Cfr13I GGNCC 3 cut(s) 92, 120, 156
CseI GACGC 1 cut(s) 937
Csp6I GTAC 1 cut(s) 1297
CviAII CATG 8 cut(s) 151, 433, 469, 538, 590, 1019, 1110, 1202
CviJI RGCY 8 cut(s) 158, 358, 411, 445, 575, 764, 935, 948
CviKI_1 RGCY 8 cut(s) 158, 358, 411, 445, 575, 764, 935, 948
CviQI GTAC 1 cut(s) 1297
DdeI CTNAG 5 cut(s) 26, 80, 135, 1275, 1365
DpnI GATC 6 cut(s) 228, 363, 586, 705, 1080, 1363
DpnII GATC 6 cut(s) 226, 361, 584, 703, 1078, 1361
Eam1104I CTCTTC 3 cut(s) 780, 798, 942
EarI CTCTTC 3 cut(s) 780, 798, 942
Eco130I CCWWGG 2 cut(s) 88, 537
Eco47I GGWCC 2 cut(s) 92, 120
Eco57I CTGAAG 3 cut(s) 318, 653, 1119
Eco88I CYCGRG 1 cut(s) 1195
EcoRI GAATTC 1 cut(s) 963
EcoRII CCWGG 1 cut(s) 1179
EcoT14I CCWWGG 2 cut(s) 88, 537
ErhI CCWWGG 2 cut(s) 88, 537
FaeI CATG 8 cut(s) 154, 436, 472, 541, 593, 1022, 1113, 1205
FaqI GGGAC 2 cut(s) 503, 1212
FatI CATG 8 cut(s) 150, 432, 468, 537, 589, 1018, 1109, 1201
FauI CCCGC 1 cut(s) 1045
Fnu4HI GCNGC 2 cut(s) 813, 946
FokI GGATG 2 cut(s) 611, 821
Fsp4HI GCNGC 2 cut(s) 813, 946
FspBI CTAG 5 cut(s) 651, 755, 932, 998, 1235
GlaI GCGC 1 cut(s) 561
GluI GCNGC 2 cut(s) 813, 946
HaeIII GGCC 1 cut(s) 158
HapII CCGG 1 cut(s) 849
HgaI GACGC 1 cut(s) 937
HhaI GCGC 1 cut(s) 562
Hin1II CATG 8 cut(s) 154, 436, 472, 541, 593, 1022, 1113, 1205
Hin6I GCGC 1 cut(s) 560
HinP1I GCGC 1 cut(s) 560
HincII GTYRAC 3 cut(s) 23, 255, 673
HindII GTYRAC 3 cut(s) 23, 255, 673
HinfI GANTC 9 cut(s) 248, 325, 533, 713, 1052, 1058, 1114, 1124, 1176
HpaI GTTAAC 1 cut(s) 673
HpaII CCGG 1 cut(s) 849
HphI GGTGA 4 cut(s) 398, 1061, 1075, 1313
Hpy166II GTNNAC 8 cut(s) 23, 50, 175, 233, 255, 673, 1118, 1304
Hpy188I TCNGA 5 cut(s) 379, 628, 727, 1057, 1330
Hpy188III TCNNGA 9 cut(s) 35, 118, 188, 245, 782, 998, 1156, 1197, 1283
Hpy8I GTNNAC 8 cut(s) 23, 50, 175, 233, 255, 673, 1118, 1304
Hpy99I CGWCG 1 cut(s) 803
HpyAV CCTTC 3 cut(s) 788, 833, 1249
HpyCH4III ACNGT 5 cut(s) 20, 185, 517, 668, 1301
HpyCH4IV ACGT 2 cut(s) 510, 638
HpyCH4V TGCA 5 cut(s) 10, 62, 104, 423, 824
HpyF10VI GCNNNNNNNGC 2 cut(s) 110, 821
HpyF3I CTNAG 5 cut(s) 26, 80, 135, 1275, 1365
HpySE526I ACGT 2 cut(s) 510, 638
Hsp92II CATG 8 cut(s) 154, 436, 472, 541, 593, 1022, 1113, 1205
HspAI GCGC 1 cut(s) 560
KspAI GTTAAC 1 cut(s) 673
Kzo9I GATC 6 cut(s) 226, 361, 584, 703, 1078, 1361
LguI GCTCTTC 1 cut(s) 942
LmnI GCTCC 2 cut(s) 169, 355
LweI GCATC 4 cut(s) 49, 307, 799, 998
MaeI CTAG 5 cut(s) 651, 755, 932, 998, 1235
MaeII ACGT 2 cut(s) 510, 638
MaeIII GTNAC 5 cut(s) 71, 245, 511, 1105, 1146
MalI GATC 6 cut(s) 228, 363, 586, 705, 1080, 1363
MboI GATC 6 cut(s) 226, 361, 584, 703, 1078, 1361
MflI RGATCY 3 cut(s) 584, 1078, 1361
MhlI GDGCHC 2 cut(s) 166, 1224
MluCI AATT 8 cut(s) 454, 500, 843, 889, 913, 923, 963, 1266
MlyI GAGTC 5 cut(s) 242, 527, 1067, 1123, 1133
MmeI TCCRAC 3 cut(s) 39, 960, 993
MseI TTAA 3 cut(s) 672, 855, 1169
MslI CAYNNNNRTG 3 cut(s) 481, 620, 1206
MspA1I CMGCKG 1 cut(s) 815
MspI CCGG 1 cut(s) 849
MspR9I CCNGG 1 cut(s) 1181
Mva1269I GAATGC 1 cut(s) 1007
MvaI CCWGG 1 cut(s) 1181
MwoI GCNNNNNNNGC 2 cut(s) 110, 821
NcoI CCATGG 1 cut(s) 537
NdeII GATC 6 cut(s) 226, 361, 584, 703, 1078, 1361
NheI GCTAGC 1 cut(s) 931
NlaIII CATG 8 cut(s) 154, 436, 472, 541, 593, 1022, 1113, 1205
NmuCI GTSAC 3 cut(s) 71, 245, 1146
NspI RCATGY 3 cut(s) 154, 472, 1205
PciI ACATGT 2 cut(s) 150, 1201
PciSI GCTCTTC 1 cut(s) 942
PctI GAATGC 1 cut(s) 1007
PfeI GAWTC 4 cut(s) 325, 713, 1052, 1176
PkrI GCNGC 2 cut(s) 814, 947
PleI GAGTC 5 cut(s) 242, 527, 1066, 1122, 1132
PpsI GAGTC 5 cut(s) 242, 527, 1066, 1122, 1132
PscI ACATGT 2 cut(s) 150, 1201
PsiI TTATAA 1 cut(s) 732
Psp6I CCWGG 1 cut(s) 1179
PspGI CCWGG 1 cut(s) 1179
PspPI GGNCC 3 cut(s) 92, 120, 156
PstNI CAGNNNCTG 1 cut(s) 1127
PsuI RGATCY 3 cut(s) 584, 1078, 1361
RsaI GTAC 1 cut(s) 1298
RsaNI GTAC 1 cut(s) 1297
RseI CAYNNNNRTG 3 cut(s) 481, 620, 1206
SapI GCTCTTC 1 cut(s) 942
SaqAI TTAA 3 cut(s) 672, 855, 1169
SatI GCNGC 2 cut(s) 813, 946
Sau3AI GATC 6 cut(s) 226, 361, 584, 703, 1078, 1361
Sau96I GGNCC 3 cut(s) 92, 120, 156
SchI GAGTC 5 cut(s) 242, 527, 1067, 1123, 1133
ScrFI CCNGG 1 cut(s) 1181
SduI GDGCHC 2 cut(s) 166, 1224
SfaNI GCATC 4 cut(s) 49, 307, 799, 998
SfcI CTRYAG 1 cut(s) 576
SinI GGWCC 2 cut(s) 92, 120
SmiMI CAYNNNNRTG 3 cut(s) 481, 620, 1206
SmlI CTYRAG 3 cut(s) 707, 1154, 1223
SmoI CTYRAG 3 cut(s) 707, 1154, 1223
SpeI ACTAGT 1 cut(s) 650
Sse9I AATT 8 cut(s) 454, 500, 843, 889, 913, 923, 963, 1266
SsiI CCGC 3 cut(s) 813, 945, 1038
SspI AATATT 1 cut(s) 769
SspMI CTAG 5 cut(s) 651, 755, 932, 998, 1235
StyD4I CCNGG 1 cut(s) 1179
StyI CCWWGG 2 cut(s) 88, 537
TaaI ACNGT 5 cut(s) 20, 185, 517, 668, 1301
TaiI ACGT 2 cut(s) 513, 641
TaqI TCGA 1 cut(s) 187
TasI AATT 8 cut(s) 454, 500, 843, 889, 913, 923, 963, 1266
TauI GCSGC 2 cut(s) 815, 948
TfiI GAWTC 4 cut(s) 325, 713, 1052, 1176
Tru1I TTAA 3 cut(s) 672, 855, 1169
Tru9I TTAA 3 cut(s) 672, 855, 1169
TscAI CASTG 5 cut(s) 52, 337, 486, 673, 1279
TseFI GTSAC 3 cut(s) 71, 245, 1146
Tsp45I GTSAC 3 cut(s) 71, 245, 1146
TspDTI ATGAA 5 cut(s) 202, 266, 271, 929, 1224
TspRI CASTG 5 cut(s) 52, 337, 486, 673, 1279
VpaK11BI GGWCC 2 cut(s) 92, 120
XapI RAATTY 3 cut(s) 500, 843, 963
XbaI TCTAGA 1 cut(s) 997
XceI RCATGY 3 cut(s) 154, 472, 1205
XspI CTAG 5 cut(s) 651, 755, 932, 998, 1235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.