MD11G1266900.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000062
Physical Location & Seq
Forward (+)
38200081 .. 38202453
2373 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1266900.v1.1.491

Sequence Viewer

Length: 1278 bp
ATGCTTGCTGATTCAGAGATAAAAATGGGTTCTCAGAAAAAATCTCTCATGCTAAACAAGAAGCCAATGCTGCAATCGATAGTCAAAGATAGGATCAGTCAATTGCCGGATCCAGTCCTTTGTCGCATGCTTTCCTTAATTCCAACAAAATATGCTGTGAGGACGAGCGTTCTGTCTAAAAGATGGAAGAACGTGTGGGCTTTTGTTCCCAATATAGACTTAGACGACGAGAATGAGCATTTTTATAGGAGAAACAGAGACACAAATGACTATGTGCGTTTCTCTACGTTTGTAGATCGAGTACTTTTCTTACATGAAATGGACATTCATAAGTTCCGACTTCATTGTTCAAATGTTGAGGATTTCGCTCCTATTGAAGGTTGGATTCGCTCTGCCATTGGTCGTAATGCTGTTGAATTTGATCTTCTTGTTGAATCTTTCACCAATCAAAATTTTAAGTTGCCTCAAAGTATTTTCATGTACAAAAAACTGGTGGTTTTGAGGGTGAATTCAAATTGTCTTAGCTATGTTCCAACTAAGTCAGGATGTTTCCGAAGCCTCAAGCTCCTCCATGTTACCTTCTGTTTTCTTGATAATGAGTCAGCGGGAAATCTTTTTTCTTGCTGCCCTGTACTTGAAGATTTGACGATACATGGAGATGTTGGACCTCATGTTTTGAATTTTAAAATCTCTGCACCCGAGTTGAAGAAGTTAAGAATAAGATTAAGAGATGTGGCACTTATCGGTGTTGTCAGCAATTTCTCTGTTAGTGCTCCGAAGCTTGAAACACTTGATGTGACCGAGGATGTTCTGTCAAACTATAATTTGGAGAGTTCAAAGTCCCTTGTCAAGGCCAGTGTTAATCTCTATCACCATGTTGCATGTTTACACCGTGAATTCTCTAACCTTTCAGCTAAGTTGCTGGCAGGAATTTCCAAGGTTAAATGTCTGTACCTTTCAGCTCATTCATTGAAGGTTTGTTGTCTGCCTGCTTTTGATAATTTGAGTGAGCTGAAGTTAGTTCTTCATAATTGCTACAACTGGGAATTGCTAACGGAGCTGCTCAAAAGATCTCCTAAGCTGGAACATCTTGTCCTAGAATATGAAGGAGAGGAATGCACTACATACTCTGACAATGAAGAAGAATACTCAGACATATTCTTAGGGCCTGAATGGAATACACCGAAGACGGTGCCTATCTGTGTGTCAACACACCTCAAGACTATCACTGTGATGGGATTCAAGGGATACTATGATGAGATGGCACTGACAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

426

Amino Acids

48.69

Weight (kDa)

7.54

Isoelectric Point (pI)

41.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 108 - 414 2.2e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 126 - 274 2.4e-11 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1192
AciI CCGC 1 cut(s) 605
AclWI GGATC 3 cut(s) 101, 104, 117
AcsI RAATTY 6 cut(s) 416, 451, 508, 679, 896, 930
AcuI CTGAAG 1 cut(s) 1034
AfaI GTAC 4 cut(s) 303, 482, 633, 953
AfiI CCNNNNNNNGG 2 cut(s) 377, 850
AflIII ACRYGT 1 cut(s) 192
AloI GAACNNNNNNTCC 2 cut(s) 1077, 1109
AluBI AGCT 8 cut(s) 525, 565, 781, 914, 962, 1012, 1060, 1081
AluI AGCT 8 cut(s) 525, 565, 781, 914, 962, 1012, 1060, 1081
Alw21I GWGCWC 1 cut(s) 775
Alw26I GTCTC 1 cut(s) 252
AlwI GGATC 3 cut(s) 101, 104, 117
Ama87I CYCGRG 1 cut(s) 698
AoxI GGCC 2 cut(s) 852, 1166
ApeKI GCWGC 3 cut(s) 70, 624, 1060
ApoI RAATTY 6 cut(s) 416, 451, 508, 679, 896, 930
AspS9I GGNCC 2 cut(s) 665, 1166
AsuHPI GGTGA 3 cut(s) 433, 517, 863
AvaI CYCGRG 1 cut(s) 698
AvaII GGWCC 1 cut(s) 665
BamHI GGATCC 1 cut(s) 109
BanI GGYRCC 1 cut(s) 1192
BbsI GAAGAC 1 cut(s) 1193
Bbv12I GWGCWC 1 cut(s) 775
BbvI GCAGC 3 cut(s) 57, 611, 1047
BccI CCATC 3 cut(s) 177, 1228, 1255
BcgI CGANNNNNNTGC 2 cut(s) 1174, 1208
BciVI GTATCC 1 cut(s) 1241
BcoDI GTCTC 1 cut(s) 252
BfaI CTAG 1 cut(s) 1097
BfuI GTATCC 1 cut(s) 1241
BglII AGATCT 1 cut(s) 1070
BisI GCNGC 3 cut(s) 71, 625, 1061
BlsI GCNGC 3 cut(s) 72, 626, 1062
BmcAI AGTACT 1 cut(s) 303
Bme18I GGWCC 1 cut(s) 665
BmeT110I CYCGRG 1 cut(s) 698
BmgT120I GGNCC 2 cut(s) 665, 1166
BmiI GGNNCC 2 cut(s) 111, 1194
BmrI ACTGGG 1 cut(s) 1051
BmuI ACTGGG 1 cut(s) 1051
BpiI GAAGAC 1 cut(s) 1193
Bpu10I CCTNAGC 1 cut(s) 1077
BpuEI CTTGAG 2 cut(s) 545, 1202
Bsa29I ATCGAT 1 cut(s) 77
BsaJI CCNNGG 2 cut(s) 801, 936
Bsc4I CCNNNNNNNGG 2 cut(s) 377, 850
Bse1I ACTGG 4 cut(s) 113, 495, 855, 1046
BseCI ATCGAT 1 cut(s) 77
BseDI CCNNGG 2 cut(s) 801, 936
BseGI GGATG 2 cut(s) 551, 811
BseLI CCNNNNNNNGG 2 cut(s) 377, 850
BseMII CTCAG 2 cut(s) 47, 1164
BseNI ACTGG 4 cut(s) 113, 495, 855, 1046
BseRI GAGGAG 1 cut(s) 557
BseXI GCAGC 3 cut(s) 57, 611, 1047
BsgI GTGCAG 1 cut(s) 678
BshFI GGCC 2 cut(s) 854, 1168
BshNI GGYRCC 1 cut(s) 1192
BshVI ATCGAT 1 cut(s) 77
BsiHKAI GWGCWC 1 cut(s) 775
BsiHKCI CYCGRG 1 cut(s) 698
BsiSI CCGG 1 cut(s) 107
BslFI GGGAC 1 cut(s) 826
BslI CCNNNNNNNGG 2 cut(s) 377, 850
BsmAI GTCTC 1 cut(s) 252
BsmFI GGGAC 1 cut(s) 826
BsmI GAATGC 1 cut(s) 1121
BsnI GGCC 2 cut(s) 854, 1168
BsoBI CYCGRG 1 cut(s) 698
Bsp1286I GDGCHC 1 cut(s) 775
Bsp1407I TGTACA 1 cut(s) 480
Bsp143I GATC 5 cut(s) 93, 109, 295, 421, 1070
BspACI CCGC 1 cut(s) 605
BspANI GGCC 2 cut(s) 854, 1168
BspCNI CTCAG 2 cut(s) 46, 1163
BspDI ATCGAT 1 cut(s) 77
BspLI GGNNCC 2 cut(s) 111, 1194
BspPI GGATC 3 cut(s) 101, 104, 117
BspT107I GGYRCC 1 cut(s) 1192
BsrGI TGTACA 1 cut(s) 480
BsrI ACTGG 4 cut(s) 113, 495, 855, 1046
BssECI CCNNGG 2 cut(s) 801, 936
BssMI GATC 5 cut(s) 93, 109, 295, 421, 1070
BssT1I CCWWGG 1 cut(s) 936
Bst4CI ACNGT 3 cut(s) 893, 1192, 1231
BstAUI TGTACA 1 cut(s) 480
BstC8I GCNNGC 4 cut(s) 6, 128, 924, 990
BstDEI CTNAG 8 cut(s) 33, 220, 521, 537, 915, 1077, 1150, 1162
BstENI CCTNNNNNAGG 2 cut(s) 375, 848
BstF5I GGATG 2 cut(s) 551, 811
BstKTI GATC 5 cut(s) 96, 112, 298, 424, 1073
BstMAI GTCTC 1 cut(s) 252
BstMBI GATC 5 cut(s) 93, 109, 295, 421, 1070
BstMWI GCNNNNNNNGC 2 cut(s) 70, 1057
BstNSI RCATGY 2 cut(s) 130, 885
BstV1I GCAGC 3 cut(s) 57, 611, 1047
BstV2I GAAGAC 1 cut(s) 1193
BstX2I RGATCY 2 cut(s) 109, 1070
BstYI RGATCY 2 cut(s) 109, 1070
Bsu15I ATCGAT 1 cut(s) 77
BsuI GTATCC 1 cut(s) 1241
BsuRI GGCC 2 cut(s) 854, 1168
BsuTUI ATCGAT 1 cut(s) 77
BtsCI GGATG 2 cut(s) 551, 811
BtsIMutI CAGTG 3 cut(s) 862, 1227, 1265
Cac8I GCNNGC 4 cut(s) 6, 128, 924, 990
Cfr13I GGNCC 2 cut(s) 665, 1166
ClaI ATCGAT 1 cut(s) 77
Csp6I GTAC 4 cut(s) 302, 481, 632, 952
CviAII CATG 9 cut(s) 49, 127, 314, 478, 572, 653, 671, 875, 882
CviQI GTAC 4 cut(s) 302, 481, 632, 952
DdeI CTNAG 8 cut(s) 33, 220, 521, 537, 915, 1077, 1150, 1162
DpnI GATC 5 cut(s) 95, 111, 297, 423, 1072
DpnII GATC 5 cut(s) 93, 109, 295, 421, 1070
DraI TTTAAA 1 cut(s) 685
Eco130I CCWWGG 1 cut(s) 936
Eco47I GGWCC 1 cut(s) 665
Eco57I CTGAAG 1 cut(s) 1034
Eco88I CYCGRG 1 cut(s) 698
EcoNI CCTNNNNNAGG 2 cut(s) 375, 848
EcoO109I RGGNCCY 1 cut(s) 1166
EcoRI GAATTC 2 cut(s) 508, 896
EcoT14I CCWWGG 1 cut(s) 936
ErhI CCWWGG 1 cut(s) 936
FaeI CATG 9 cut(s) 52, 130, 317, 481, 575, 656, 674, 878, 885
FaqI GGGAC 1 cut(s) 826
FatI CATG 9 cut(s) 48, 126, 313, 477, 571, 652, 670, 874, 881
FauI CCCGC 1 cut(s) 598
Fnu4HI GCNGC 3 cut(s) 71, 625, 1061
FokI GGATG 2 cut(s) 558, 818
Fsp4HI GCNGC 3 cut(s) 71, 625, 1061
FspBI CTAG 1 cut(s) 1097
GluI GCNGC 3 cut(s) 71, 625, 1061
HaeIII GGCC 2 cut(s) 854, 1168
HapII CCGG 1 cut(s) 107
Hin1II CATG 9 cut(s) 52, 130, 317, 481, 575, 656, 674, 878, 885
HincII GTYRAC 1 cut(s) 1209
HindII GTYRAC 1 cut(s) 1209
HindIII AAGCTT 1 cut(s) 779
HinfI GANTC 5 cut(s) 11, 385, 434, 599, 1239
HpaII CCGG 1 cut(s) 107
HphI GGTGA 3 cut(s) 433, 517, 863
Hpy166II GTNNAC 2 cut(s) 887, 1209
Hpy188I TCNGA 7 cut(s) 16, 36, 338, 554, 777, 1132, 1153
Hpy188III TCNNGA 3 cut(s) 543, 590, 1219
Hpy8I GTNNAC 2 cut(s) 887, 1209
Hpy99I CGWCG 1 cut(s) 230
HpyAV CCTTC 4 cut(s) 371, 589, 967, 1100
HpyCH4III ACNGT 3 cut(s) 893, 1192, 1231
HpyCH4IV ACGT 2 cut(s) 192, 287
HpyCH4V TGCA 4 cut(s) 73, 695, 881, 1119
HpyF10VI GCNNNNNNNGC 2 cut(s) 70, 1057
HpyF3I CTNAG 8 cut(s) 33, 220, 521, 537, 915, 1077, 1150, 1162
HpySE526I ACGT 2 cut(s) 192, 287
Hsp92II CATG 9 cut(s) 52, 130, 317, 481, 575, 656, 674, 878, 885
Kzo9I GATC 5 cut(s) 93, 109, 295, 421, 1070
LmnI GCTCC 4 cut(s) 373, 570, 778, 1057
Lsp1109I GCAGC 3 cut(s) 57, 611, 1047
MaeI CTAG 1 cut(s) 1097
MaeII ACGT 2 cut(s) 192, 287
MaeIII GTNAC 2 cut(s) 574, 796
MalI GATC 5 cut(s) 95, 111, 297, 423, 1072
MboI GATC 5 cut(s) 93, 109, 295, 421, 1070
MboII GAAGA 8 cut(s) 199, 416, 650, 718, 1016, 1151, 1154, 1198
MfeI CAATTG 1 cut(s) 101
MflI RGATCY 2 cut(s) 109, 1070
MhlI GDGCHC 1 cut(s) 775
MlyI GAGTC 1 cut(s) 608
MmeI TCCRAC 5 cut(s) 167, 361, 362, 557, 643
MseI TTAA 7 cut(s) 137, 456, 684, 713, 725, 861, 942
MslI CAYNNNNRTG 2 cut(s) 657, 1232
MspA1I CMGCKG 1 cut(s) 605
MspI CCGG 1 cut(s) 107
MunI CAATTG 1 cut(s) 101
Mva1269I GAATGC 1 cut(s) 1121
MwoI GCNNNNNNNGC 2 cut(s) 70, 1057
NdeII GATC 5 cut(s) 93, 109, 295, 421, 1070
NlaIII CATG 9 cut(s) 52, 130, 317, 481, 575, 656, 674, 878, 885
NlaIV GGNNCC 2 cut(s) 111, 1194
NmuCI GTSAC 1 cut(s) 796
NspI RCATGY 2 cut(s) 130, 885
PaeI GCATGC 1 cut(s) 130
PctI GAATGC 1 cut(s) 1121
PfeI GAWTC 4 cut(s) 11, 385, 434, 1239
PkrI GCNGC 3 cut(s) 72, 626, 1062
PleI GAGTC 1 cut(s) 607
PpsI GAGTC 1 cut(s) 607
PspN4I GGNNCC 2 cut(s) 111, 1194
PspPI GGNCC 2 cut(s) 665, 1166
PsuI RGATCY 2 cut(s) 109, 1070
RsaI GTAC 4 cut(s) 303, 482, 633, 953
RsaNI GTAC 4 cut(s) 302, 481, 632, 952
RseI CAYNNNNRTG 2 cut(s) 657, 1232
SaqAI TTAA 7 cut(s) 137, 456, 684, 713, 725, 861, 942
SatI GCNGC 3 cut(s) 71, 625, 1061
Sau3AI GATC 5 cut(s) 93, 109, 295, 421, 1070
Sau96I GGNCC 2 cut(s) 665, 1166
ScaI AGTACT 1 cut(s) 303
SchI GAGTC 1 cut(s) 608
SduI GDGCHC 1 cut(s) 775
SinI GGWCC 1 cut(s) 665
SmiMI CAYNNNNRTG 2 cut(s) 657, 1232
SmlI CTYRAG 2 cut(s) 560, 1217
SmoI CTYRAG 2 cut(s) 560, 1217
SphI GCATGC 1 cut(s) 130
SsiI CCGC 1 cut(s) 605
SspMI CTAG 1 cut(s) 1097
StyI CCWWGG 1 cut(s) 936
TaaI ACNGT 3 cut(s) 893, 1192, 1231
TaiI ACGT 2 cut(s) 195, 290
TaqI TCGA 2 cut(s) 77, 298
TaqII GACCGA 1 cut(s) 815
TatI WGTACW 3 cut(s) 301, 480, 631
TfiI GAWTC 4 cut(s) 11, 385, 434, 1239
Tru1I TTAA 7 cut(s) 137, 456, 684, 713, 725, 861, 942
Tru9I TTAA 7 cut(s) 137, 456, 684, 713, 725, 861, 942
TscAI CASTG 3 cut(s) 862, 1234, 1272
TseFI GTSAC 1 cut(s) 796
TseI GCWGC 3 cut(s) 70, 624, 1060
Tsp45I GTSAC 1 cut(s) 796
TspDTI ATGAA 8 cut(s) 317, 330, 332, 466, 957, 1016, 1119, 1152
TspGWI ACGGA 1 cut(s) 1070
TspRI CASTG 3 cut(s) 862, 1234, 1272
VpaK11BI GGWCC 1 cut(s) 665
XagI CCTNNNNNAGG 2 cut(s) 375, 848
XapI RAATTY 6 cut(s) 416, 451, 508, 679, 896, 930
XceI RCATGY 2 cut(s) 130, 885
XspI CTAG 1 cut(s) 1097
ZrmI AGTACT 1 cut(s) 303
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.