FvH4_3g17110

domain in FBox and BRCT domain containing plant proteins

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000062
Physical Location & Seq
Forward (+)
10841041 .. 10842940
1900 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g17110.t1

Sequence Viewer

Length: 1110 bp
ATGAATGAAGATGTGGAACACTCACGTGTTAATGCTTGGATCAACACTGCCATTAGGCGCAATGTTGTTGAAATTGATCTTTGGGCCATGTATTCAGGTTCATCCCAGATTCTTGAGTTGCCTAAAAGCCTTTTCATGTGCAAAACATTGGAGAGTCTGAAGCTGAGATCACCATTTATTAGTAATCTTCCTGCTTCAGGGTGTTTTCCAAGTCTCAAGTTTCTCTATGTTGACTTTTTCCGTGAGGTTCATGACACAATGCTTCCAGTTTTCTCTAACTTGCCGAAACTTGAAGATTTGACTATACGTTGTCATTCTCGATGTGATTCTTCTCAGAAATTAAACATTGCTGCCCCTGCACTCAAGAAGCTAAGATTAAGTTTGTATACAAATGATAATGGTATTAATAGCTACAACTATCTAATTAATTGCCCAAAGCTTGAAAATCTTTATGTCAATGAGCGGGTTCCATCGACCTATTATTGGGGCAAAGCAAAATCCCTAGTCAGAGCTAGTATTTATCTACATCAACATTGCTCAAATGAACAGCTAAGTTTCTACGATGTGACTGCGCTTTTGGCAGGAGTATCCAATGTTATAGATTTATGTCTTTCAGCTCATTGTTTTGAGGTAGGGTGCCAGGTGGTTTCAGAAGACTCTGAGAGTGAAGAGGGCTCAGACCATGAAGAGAGGTCAGAGAGTGAACAGGGATCATATGATGTAGATGGGCCAGTGAATGAACAAGGGTCAGAGCATGAAGTAAACTCCAAGAGTGAAGAGGGATCTTTGCATAAAGGGGGGTTAGACCATGAAGACGGGTTAGATAGTGTGCAAGGGTCAGAGCATCAATGGAATCCTCTAGATTCTGTGCCTAGATGTTGTTGGTTACACCTCAAGATTGTCTCCATGGAGAACTTCAGGGGAAACCGTGAGGAGTTGGAAGTGGCAAAGTACTTGCTGCAGTACGGTCATGTCTTGAACAAGATTACTATATCTTTGGATGATCTTGATTGGGTTGAAAAAGTGAAGATCTACGAGGAGATTCAATGGCTTCCGAGGGCTTCAAGAACTTGTAGAGTTGTACTAACCTCGAAGGGGGGTTTTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

370

Amino Acids

41.95

Weight (kDa)

5.23

Isoelectric Point (pI)

45.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 4 - 212 4.5e-06 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 11 - 156 7.1e-08 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 288 - 331 1.5e-11 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 636
AccBSI CCGCTC 1 cut(s) 463
AccI GTMKAC 1 cut(s) 386
AciI CCGC 1 cut(s) 463
AclWI GGATC 3 cut(s) 47, 718, 790
AcuI CTGAAG 3 cut(s) 179, 180, 901
AcvI CACGTG 1 cut(s) 26
AfaI GTAC 3 cut(s) 953, 965, 1083
AfiI CCNNNNNNNGG 3 cut(s) 197, 483, 1095
AflIII ACRYGT 1 cut(s) 25
AgsI TTSAA 7 cut(s) 71, 293, 443, 979, 1019, 1046, 1065
AjnI CCWGG 1 cut(s) 639
AleI CACNNNNGTG 1 cut(s) 24
AluBI AGCT 7 cut(s) 163, 370, 411, 439, 512, 550, 617
AluI AGCT 7 cut(s) 163, 370, 411, 439, 512, 550, 617
Alw26I GTCTC 2 cut(s) 218, 907
AlwI GGATC 3 cut(s) 47, 718, 790
AoxI GGCC 2 cut(s) 84, 728
ApeKI GCWGC 2 cut(s) 350, 958
ArsI GACNNNNNNTTYG 2 cut(s) 559, 591
AseI ATTAAT 2 cut(s) 405, 426
AspLEI GCGC 2 cut(s) 60, 574
AspS9I GGNCC 2 cut(s) 84, 728
AsuHPI GGTGA 1 cut(s) 162
BanI GGYRCC 1 cut(s) 636
BanII GRGCYC 1 cut(s) 677
BbrPI CACGTG 1 cut(s) 26
BbsI GAAGAC 2 cut(s) 660, 819
BbvI GCAGC 2 cut(s) 337, 945
BccI CCATC 2 cut(s) 478, 719
BcgI CGANNNNNNTGC 2 cut(s) 551, 585
BciT130I CCWGG 1 cut(s) 641
BciVI GTATCC 1 cut(s) 598
BcoDI GTCTC 2 cut(s) 218, 907
BfaI CTAG 4 cut(s) 503, 513, 860, 873
BfmI CTRYAG 1 cut(s) 959
BfuI GTATCC 1 cut(s) 598
BglII AGATCT 1 cut(s) 1029
BisI GCNGC 2 cut(s) 351, 959
BlsI GCNGC 2 cut(s) 352, 960
BmcAI AGTACT 1 cut(s) 953
Bme1390I CCNGG 1 cut(s) 641
BmgT120I GGNCC 2 cut(s) 84, 728
BmiI GGNNCC 2 cut(s) 468, 638
BmrFI CCNGG 1 cut(s) 641
BmsI GCATC 1 cut(s) 853
BpiI GAAGAC 2 cut(s) 660, 819
BpuEI CTTGAG 4 cut(s) 134, 200, 347, 878
BsaAI YACGTR 1 cut(s) 26
BsaJI CCNNGG 2 cut(s) 906, 1055
Bsc4I CCNNNNNNNGG 3 cut(s) 197, 483, 1095
Bse1I ACTGG 2 cut(s) 266, 731
Bse3DI GCAATG 3 cut(s) 67, 345, 532
BseBI CCWGG 1 cut(s) 641
BseDI CCNNGG 2 cut(s) 906, 1055
BseGI GGATG 2 cut(s) 101, 1006
BseLI CCNNNNNNNGG 3 cut(s) 197, 483, 1095
BseMI GCAATG 3 cut(s) 67, 345, 532
BseMII CTCAG 4 cut(s) 155, 347, 651, 690
BseNI ACTGG 2 cut(s) 266, 731
BseRI GAGGAG 2 cut(s) 947, 1052
BseXI GCAGC 2 cut(s) 337, 945
BsgI GTGCAG 1 cut(s) 342
BshFI GGCC 2 cut(s) 86, 730
BshNI GGYRCC 1 cut(s) 636
BslI CCNNNNNNNGG 3 cut(s) 197, 483, 1095
BsmAI GTCTC 2 cut(s) 218, 907
BsnI GGCC 2 cut(s) 86, 730
Bsp1286I GDGCHC 1 cut(s) 677
Bsp143I GATC 7 cut(s) 39, 76, 167, 710, 782, 1003, 1029
Bsp19I CCATGG 1 cut(s) 906
BspACI CCGC 1 cut(s) 463
BspANI GGCC 2 cut(s) 86, 730
BspCNI CTCAG 4 cut(s) 156, 346, 652, 689
BspHI TCATGA 1 cut(s) 250
BspLI GGNNCC 2 cut(s) 468, 638
BspMAI CTGCAG 1 cut(s) 963
BspPI GGATC 3 cut(s) 47, 718, 790
BspT107I GGYRCC 1 cut(s) 636
BsrBI CCGCTC 1 cut(s) 463
BsrDI GCAATG 3 cut(s) 67, 345, 532
BsrI ACTGG 2 cut(s) 266, 731
BssECI CCNNGG 2 cut(s) 906, 1055
BssMI GATC 7 cut(s) 39, 76, 167, 710, 782, 1003, 1029
BssNAI GTATAC 1 cut(s) 387
BssT1I CCWWGG 1 cut(s) 906
Bst1107I GTATAC 1 cut(s) 387
Bst2UI CCWGG 1 cut(s) 641
Bst4CI ACNGT 2 cut(s) 929, 968
Bst6I CTCTTC 3 cut(s) 663, 681, 771
BstBAI YACGTR 1 cut(s) 26
BstDEI CTNAG 6 cut(s) 164, 333, 371, 551, 660, 676
BstDSI CCRYGG 1 cut(s) 906
BstENI CCTNNNNNAGG 1 cut(s) 195
BstF5I GGATG 2 cut(s) 101, 1006
BstHHI GCGC 2 cut(s) 60, 574
BstKTI GATC 7 cut(s) 42, 79, 170, 713, 785, 1006, 1032
BstMAI GTCTC 2 cut(s) 218, 907
BstMBI GATC 7 cut(s) 39, 76, 167, 710, 782, 1003, 1029
BstMWI GCNNNNNNNGC 2 cut(s) 356, 578
BstNI CCWGG 1 cut(s) 641
BstSCI CCNGG 1 cut(s) 639
BstSFI CTRYAG 1 cut(s) 959
BstV1I GCAGC 2 cut(s) 337, 945
BstV2I GAAGAC 2 cut(s) 660, 819
BstX2I RGATCY 2 cut(s) 782, 1029
BstYI RGATCY 2 cut(s) 782, 1029
BstZ17I GTATAC 1 cut(s) 387
BsuI GTATCC 1 cut(s) 598
BsuRI GGCC 2 cut(s) 86, 730
BtgI CCRYGG 1 cut(s) 906
BtsCI GGATG 2 cut(s) 101, 1006
BtsI GCAGTG 1 cut(s) 45
BtsIMutI CAGTG 2 cut(s) 45, 738
CciI TCATGA 1 cut(s) 250
CfoI GCGC 2 cut(s) 60, 574
Cfr13I GGNCC 2 cut(s) 84, 728
Csp6I GTAC 3 cut(s) 952, 964, 1082
CviAII CATG 8 cut(s) 88, 136, 251, 683, 755, 809, 907, 971
CviQI GTAC 3 cut(s) 952, 964, 1082
DdeI CTNAG 6 cut(s) 164, 333, 371, 551, 660, 676
DpnI GATC 7 cut(s) 41, 78, 169, 712, 784, 1005, 1031
DpnII GATC 7 cut(s) 39, 76, 167, 710, 782, 1003, 1029
Eam1104I CTCTTC 3 cut(s) 663, 681, 771
EarI CTCTTC 3 cut(s) 663, 681, 771
Eco130I CCWWGG 1 cut(s) 906
Eco24I GRGCYC 1 cut(s) 677
Eco57I CTGAAG 3 cut(s) 179, 180, 901
Eco72I CACGTG 1 cut(s) 26
EcoNI CCTNNNNNAGG 1 cut(s) 195
EcoRII CCWGG 1 cut(s) 639
EcoT14I CCWWGG 1 cut(s) 906
EcoT38I GRGCYC 1 cut(s) 677
ErhI CCWWGG 1 cut(s) 906
FaeI CATG 8 cut(s) 91, 139, 254, 686, 758, 812, 910, 974
FatI CATG 8 cut(s) 87, 135, 250, 682, 754, 808, 906, 970
FauI CCCGC 1 cut(s) 456
FauNDI CATATG 1 cut(s) 715
FblI GTMKAC 1 cut(s) 386
Fnu4HI GCNGC 2 cut(s) 351, 959
FokI GGATG 2 cut(s) 88, 1013
FriOI GRGCYC 1 cut(s) 677
Fsp4HI GCNGC 2 cut(s) 351, 959
FspBI CTAG 4 cut(s) 503, 513, 860, 873
GlaI GCGC 2 cut(s) 59, 573
GluI GCNGC 2 cut(s) 351, 959
HaeIII GGCC 2 cut(s) 86, 730
HhaI GCGC 2 cut(s) 60, 574
Hin1II CATG 8 cut(s) 91, 139, 254, 686, 758, 812, 910, 974
Hin6I GCGC 2 cut(s) 58, 572
HinP1I GCGC 2 cut(s) 58, 572
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HindIII AAGCTT 1 cut(s) 437
HinfI GANTC 7 cut(s) 109, 154, 326, 656, 853, 863, 1042
HphI GGTGA 1 cut(s) 162
Hpy166II GTNNAC 4 cut(s) 232, 387, 704, 763
Hpy188III TCNNGA 9 cut(s) 113, 251, 318, 364, 860, 895, 976, 1007, 1065
Hpy8I GTNNAC 4 cut(s) 232, 387, 704, 763
HpyAV CCTTC 1 cut(s) 1087
HpyCH4III ACNGT 2 cut(s) 929, 968
HpyCH4IV ACGT 2 cut(s) 25, 307
HpyCH4V TGCA 5 cut(s) 141, 359, 790, 832, 961
HpyF10VI GCNNNNNNNGC 2 cut(s) 356, 578
HpyF3I CTNAG 6 cut(s) 164, 333, 371, 551, 660, 676
HpySE526I ACGT 2 cut(s) 25, 307
Hsp92II CATG 8 cut(s) 91, 139, 254, 686, 758, 812, 910, 974
HspAI GCGC 2 cut(s) 58, 572
Kzo9I GATC 7 cut(s) 39, 76, 167, 710, 782, 1003, 1029
Lsp1109I GCAGC 2 cut(s) 337, 945
LweI GCATC 1 cut(s) 853
MaeI CTAG 4 cut(s) 503, 513, 860, 873
MaeII ACGT 2 cut(s) 25, 307
MaeIII GTNAC 2 cut(s) 565, 885
MalI GATC 7 cut(s) 41, 78, 169, 712, 784, 1005, 1031
MbiI CCGCTC 1 cut(s) 463
MboI GATC 7 cut(s) 39, 76, 167, 710, 782, 1003, 1029
MflI RGATCY 2 cut(s) 782, 1029
MhlI GDGCHC 1 cut(s) 677
MluCI AATT 4 cut(s) 72, 338, 423, 427
MlyI GAGTC 2 cut(s) 163, 650
MmeI TCCRAC 1 cut(s) 918
MseI TTAA 5 cut(s) 30, 341, 377, 405, 426
MslI CAYNNNNRTG 1 cut(s) 24
MspR9I CCNGG 1 cut(s) 641
MvaI CCWGG 1 cut(s) 641
MwoI GCNNNNNNNGC 2 cut(s) 356, 578
NcoI CCATGG 1 cut(s) 906
NdeI CATATG 1 cut(s) 715
NdeII GATC 7 cut(s) 39, 76, 167, 710, 782, 1003, 1029
NlaIII CATG 8 cut(s) 91, 139, 254, 686, 758, 812, 910, 974
NlaIV GGNNCC 2 cut(s) 468, 638
NmuCI GTSAC 1 cut(s) 565
OliI CACNNNNGTG 1 cut(s) 24
PagI TCATGA 1 cut(s) 250
PfeI GAWTC 5 cut(s) 109, 326, 853, 863, 1042
PkrI GCNGC 2 cut(s) 352, 960
PleI GAGTC 2 cut(s) 162, 650
PmaCI CACGTG 1 cut(s) 26
PmlI CACGTG 1 cut(s) 26
PpsI GAGTC 2 cut(s) 162, 650
Ppu21I YACGTR 1 cut(s) 26
PshBI ATTAAT 2 cut(s) 405, 426
Psp6I CCWGG 1 cut(s) 639
PspCI CACGTG 1 cut(s) 26
PspGI CCWGG 1 cut(s) 639
PspN4I GGNNCC 2 cut(s) 468, 638
PspPI GGNCC 2 cut(s) 84, 728
PstI CTGCAG 1 cut(s) 963
PsuI RGATCY 2 cut(s) 782, 1029
RsaI GTAC 3 cut(s) 953, 965, 1083
RsaNI GTAC 3 cut(s) 952, 964, 1082
RseI CAYNNNNRTG 1 cut(s) 24
SaqAI TTAA 5 cut(s) 30, 341, 377, 405, 426
SatI GCNGC 2 cut(s) 351, 959
Sau3AI GATC 7 cut(s) 39, 76, 167, 710, 782, 1003, 1029
Sau96I GGNCC 2 cut(s) 84, 728
ScaI AGTACT 1 cut(s) 953
SchI GAGTC 2 cut(s) 163, 650
ScrFI CCNGG 1 cut(s) 641
SduI GDGCHC 1 cut(s) 677
SfaNI GCATC 1 cut(s) 853
SfcI CTRYAG 1 cut(s) 959
SmiMI CAYNNNNRTG 1 cut(s) 24
SmlI CTYRAG 4 cut(s) 113, 215, 362, 893
SmoI CTYRAG 4 cut(s) 113, 215, 362, 893
Sse9I AATT 4 cut(s) 72, 338, 423, 427
SsiI CCGC 1 cut(s) 463
SspMI CTAG 4 cut(s) 503, 513, 860, 873
StyD4I CCNGG 1 cut(s) 639
StyI CCWWGG 1 cut(s) 906
TaaI ACNGT 2 cut(s) 929, 968
TaiI ACGT 2 cut(s) 28, 310
TaqI TCGA 3 cut(s) 319, 473, 1091
TasI AATT 4 cut(s) 72, 338, 423, 427
TatI WGTACW 2 cut(s) 951, 1081
TfiI GAWTC 5 cut(s) 109, 326, 853, 863, 1042
Tru1I TTAA 5 cut(s) 30, 341, 377, 405, 426
Tru9I TTAA 5 cut(s) 30, 341, 377, 405, 426
TscAI CASTG 2 cut(s) 52, 738
TseFI GTSAC 1 cut(s) 565
TseI GCWGC 2 cut(s) 350, 958
Tsp45I GTSAC 1 cut(s) 565
TspGWI ACGGA 1 cut(s) 230
TspRI CASTG 2 cut(s) 52, 738
VspI ATTAAT 2 cut(s) 405, 426
XagI CCTNNNNNAGG 1 cut(s) 195
XbaI TCTAGA 1 cut(s) 859
XmiI GTMKAC 1 cut(s) 386
XspI CTAG 4 cut(s) 503, 513, 860, 873
ZrmI AGTACT 1 cut(s) 953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.