Rorug05G0107800

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000062
Physical Location & Seq
Reverse (-)
9561643 .. 9564213
2571 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0107800.1

Sequence Viewer

Length: 1209 bp
ATGGCCACCGTCTTCGGAGCCACTTCCGCCGCCATCTCCGTCTCCTCCTCCAGCTCCCGCAAACTCCACCTCCCTTCCCGTAGATCCCTCCCAGGGAGGAAAGCCAGCTTTCTTGTGGTTAGATCTGATGCCGGAGCTAACCCCAATGCTGGACCCCGCCGCGCCGGTCAGTTGATCACCAATGCCGTTGCCACAAAAGCTGATGCTGCTGCGGCTTCCGCTCCGTCGAAACCTGGGCATGAACTTCTTCTTTTTGAAGCCTTACGAGAAGGATTGGAAGAAGAGATGGCTAGGGATCCCACTGTATGTGTAATGGGTGAAGATGTGGGCCACTATGGAGGATCGTACAAGGTGACCAAAGGCCTGGCTGATAAGTATGGGGATCTCAGGGTTCTTGATACTCCTATTGCTGAGAACTCCTTCACAGGGATGGGTATTGGAGCTGCCATGACTGGTCTGAGACCAATTATTGAGGGTATGAACATGGGTTTTCTCCTTCTTGCCTTTAACCAGATCTCCAACAACTGTGGTATGCTCCACTACACTTCTGGAGGTCAATTCAAGATACCAGTAGTCATTCGTGGACCTGGTGGAGTGGGTAGGCAACTTGGGGCTGAGCACTCACAACGTCTTGAGTCATACTTTCAGTCGATCCCTGGAATCCAAATGGTAGCATGCTCAACCCCTTACAATGCTAAAGGCTTGATGAAAGCTGCCATTCGAAGTGATAACCCTGTTATCCTTTTCGAGCATGTGTTGCTGTACAACCTGAAGGAGAGAATCCCAGATGAAGAATATGTGTGTTCTCTTGAGGAAGCTGAGATGGTGAGGCCTGGGGAGCATGTCACTATATTAACATATTCTAGGATGAGGTATCATGTGATGCAGGCTGCTAAAACTTTGGTGAACAAGGGGTATGACCCAGAAGTTATTGATATTAGGTCATTGAAACCATTTGACCTTCACACCATCGGGAACTCAGTGAAGAAAACACATAGGGTCCTGATTGTGGAGGAGTGCATGCGGACAGGTGGAATTGGTGCTAGTTTGACAGCAGCCATCACCGAGAACTTTCATGATTATTTGGATGCCCCAATTGTATGCCTGTCATCACAGGACGTGCCAACGCCATATGCTGCAACATTAGAGGAAGTGACTGTTGTTCAACCAGCTCAGATTGTGACCGCAGTTGAGGAGCTTTGCCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

402

Amino Acids

43.34

Weight (kDa)

6.28

Isoelectric Point (pI)

38.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Transket_pyr PF02779 86 - 256 1.7e-43 Transketolase, pyrimidine binding domain
Transketolase_C PF02780 272 - 393 1.1e-37 Transketolase, C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 221
AccII CGCG 1 cut(s) 162
AciI CCGC 9 cut(s) 27, 30, 58, 157, 160, 212, 219, 1024, 1185
AclWI GGATC 6 cut(s) 78, 290, 303, 349, 390, 646
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 1 cut(s) 791
AfaI GTAC 2 cut(s) 347, 764
AfiI CCNNNNNNNGG 4 cut(s) 93, 149, 426, 1009
AgsI TTSAA 4 cut(s) 257, 562, 949, 1166
AjiI CACGTC 1 cut(s) 1120
AjnI CCWGG 6 cut(s) 91, 232, 363, 586, 655, 832
AluBI AGCT 9 cut(s) 54, 108, 137, 200, 443, 713, 818, 1172, 1198
AluI AGCT 9 cut(s) 54, 108, 137, 200, 443, 713, 818, 1172, 1198
Alw21I GWGCWC 1 cut(s) 621
Alw26I GTCTC 2 cut(s) 46, 454
AlwI GGATC 6 cut(s) 78, 290, 303, 349, 390, 646
AoxI GGCC 4 cut(s) 3, 328, 361, 830
ApeKI GCWGC 7 cut(s) 206, 209, 443, 713, 890, 1055, 1136
Asp700I GAANNNNTTC 2 cut(s) 246, 419
AspLEI GCGC 1 cut(s) 164
AspS9I GGNCC 4 cut(s) 152, 328, 584, 1000
AsuHPI GGTGA 6 cut(s) 169, 329, 364, 838, 916, 1054
AsuII TTCGAA 1 cut(s) 721
AvaII GGWCC 3 cut(s) 152, 584, 1000
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 295
BbsI GAAGAC 1 cut(s) 4
Bbv12I GWGCWC 1 cut(s) 621
BbvI GCAGC 7 cut(s) 193, 196, 430, 700, 877, 1067, 1123
BccI CCATC 6 cut(s) 41, 280, 424, 817, 977, 1067
BceAI ACGGC 1 cut(s) 170
BciT130I CCWGG 6 cut(s) 93, 234, 365, 588, 657, 834
BclI TGATCA 1 cut(s) 174
BcoDI GTCTC 2 cut(s) 46, 454
BfaI CTAG 3 cut(s) 291, 864, 1044
BglII AGATCT 2 cut(s) 122, 513
BlpI GCTNAGC 1 cut(s) 615
Bme1390I CCNGG 6 cut(s) 93, 234, 365, 588, 657, 834
Bme18I GGWCC 3 cut(s) 152, 584, 1000
BmgBI CACGTC 1 cut(s) 1120
BmgT120I GGNCC 4 cut(s) 152, 328, 584, 1000
BmiI GGNNCC 4 cut(s) 19, 154, 297, 1001
BmrFI CCNGG 6 cut(s) 93, 234, 365, 588, 657, 834
BmsI GCATC 4 cut(s) 118, 193, 873, 1078
BpiI GAAGAC 1 cut(s) 4
BpmI CTGGAG 2 cut(s) 34, 570
Bpu1102I GCTNAGC 1 cut(s) 615
Bpu14I TTCGAA 1 cut(s) 721
BpuEI CTTGAG 2 cut(s) 653, 830
BsaI GGTCTC 1 cut(s) 454
BsaJI CCNNGG 5 cut(s) 91, 92, 233, 655, 833
BsaXI ACNNNNNCTCC 4 cut(s) 54, 84, 500, 530
Bsc4I CCNNNNNNNGG 4 cut(s) 93, 149, 426, 1009
Bse118I RCCGGY 1 cut(s) 164
Bse1I ACTGG 3 cut(s) 457, 569, 1204
BseBI CCWGG 6 cut(s) 93, 234, 365, 588, 657, 834
BseDI CCNNGG 5 cut(s) 91, 92, 233, 655, 833
BseGI GGATG 3 cut(s) 435, 873, 1093
BseLI CCNNNNNNNGG 4 cut(s) 93, 149, 426, 1009
BseMII CTCAG 7 cut(s) 400, 402, 449, 606, 810, 993, 1187
BseNI ACTGG 3 cut(s) 457, 569, 1204
BseRI GAGGAG 4 cut(s) 34, 37, 1028, 1208
BseXI GCAGC 7 cut(s) 193, 196, 430, 700, 877, 1067, 1123
Bsh1236I CGCG 1 cut(s) 162
BshFI GGCC 4 cut(s) 5, 330, 363, 832
BsiHKAI GWGCWC 1 cut(s) 621
BsiSI CCGG 2 cut(s) 132, 165
BslI CCNNNNNNNGG 4 cut(s) 93, 149, 426, 1009
BsmAI GTCTC 2 cut(s) 46, 454
BsmBI CGTCTC 1 cut(s) 46
BsnI GGCC 4 cut(s) 5, 330, 363, 832
Bso31I GGTCTC 1 cut(s) 454
Bsp119I TTCGAA 1 cut(s) 721
Bsp1286I GDGCHC 1 cut(s) 621
Bsp1407I TGTACA 1 cut(s) 762
Bsp143I GATC 8 cut(s) 83, 122, 174, 295, 341, 382, 513, 651
Bsp1720I GCTNAGC 1 cut(s) 615
BspACI CCGC 9 cut(s) 27, 30, 58, 157, 160, 212, 219, 1024, 1185
BspANI GGCC 4 cut(s) 5, 330, 363, 832
BspCNI CTCAG 7 cut(s) 399, 403, 450, 607, 811, 992, 1186
BspFNI CGCG 1 cut(s) 162
BspHI TCATGA 1 cut(s) 1075
BspLI GGNNCC 4 cut(s) 19, 154, 297, 1001
BspPI GGATC 6 cut(s) 78, 290, 303, 349, 390, 646
BspT104I TTCGAA 1 cut(s) 721
BspTNI GGTCTC 1 cut(s) 454
BsrBI CCGCTC 1 cut(s) 221
BsrFI RCCGGY 1 cut(s) 164
BsrGI TGTACA 1 cut(s) 762
BsrI ACTGG 3 cut(s) 457, 569, 1204
BssAI RCCGGY 1 cut(s) 164
BssECI CCNNGG 5 cut(s) 91, 92, 233, 655, 833
BssMI GATC 8 cut(s) 83, 122, 174, 295, 341, 382, 513, 651
Bst2UI CCWGG 6 cut(s) 93, 234, 365, 588, 657, 834
Bst4CI ACNGT 4 cut(s) 10, 304, 527, 1159
Bst6I CTCTTC 1 cut(s) 276
BstAPI GCANNNNNTGC 1 cut(s) 757
BstAUI TGTACA 1 cut(s) 762
BstBI TTCGAA 1 cut(s) 721
BstC8I GCNNGC 4 cut(s) 106, 676, 888, 1022
BstDEI CTNAG 7 cut(s) 386, 411, 458, 615, 819, 979, 1173
BstEII GGTNACC 1 cut(s) 352
BstF5I GGATG 3 cut(s) 435, 873, 1093
BstFNI CGCG 1 cut(s) 162
BstHHI GCGC 1 cut(s) 164
BstKTI GATC 8 cut(s) 86, 125, 177, 298, 344, 385, 516, 654
BstMAI GTCTC 2 cut(s) 46, 454
BstMBI GATC 8 cut(s) 83, 122, 174, 295, 341, 382, 513, 651
BstMWI GCNNNNNNNGC 7 cut(s) 26, 197, 206, 212, 218, 757, 838
BstNI CCWGG 6 cut(s) 93, 234, 365, 588, 657, 834
BstNSI RCATGY 4 cut(s) 678, 755, 845, 1024
BstPI GGTNACC 1 cut(s) 352
BstSCI CCNGG 6 cut(s) 91, 232, 363, 586, 655, 832
BstUI CGCG 1 cut(s) 162
BstV1I GCAGC 7 cut(s) 193, 196, 430, 700, 877, 1067, 1123
BstV2I GAAGAC 1 cut(s) 4
BstX2I RGATCY 5 cut(s) 83, 122, 295, 382, 513
BstXI CCANNNNNNTGG 1 cut(s) 364
BstYI RGATCY 5 cut(s) 83, 122, 295, 382, 513
BsuRI GGCC 4 cut(s) 5, 330, 363, 832
BtrI CACGTC 1 cut(s) 1120
BtsCI GGATG 3 cut(s) 435, 873, 1093
BtsIMutI CAGTG 2 cut(s) 300, 987
Cac8I GCNNGC 4 cut(s) 106, 676, 888, 1022
CciI TCATGA 1 cut(s) 1075
CfoI GCGC 1 cut(s) 164
Cfr10I RCCGGY 1 cut(s) 164
Cfr13I GGNCC 4 cut(s) 152, 328, 584, 1000
CsiI ACCWGGT 1 cut(s) 586
Csp6I GTAC 2 cut(s) 346, 763
CspCI CAANNNNNGTGG 2 cut(s) 508, 543
CviAII CATG 9 cut(s) 239, 448, 484, 675, 752, 842, 878, 1021, 1076
CviQI GTAC 2 cut(s) 346, 763
DdeI CTNAG 7 cut(s) 386, 411, 458, 615, 819, 979, 1173
DpnI GATC 8 cut(s) 85, 124, 176, 297, 343, 384, 515, 653
DpnII GATC 8 cut(s) 83, 122, 174, 295, 341, 382, 513, 651
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 276
EarI CTCTTC 1 cut(s) 276
EciI GGCGGA 1 cut(s) 16
Eco147I AGGCCT 2 cut(s) 363, 832
Eco31I GGTCTC 1 cut(s) 454
Eco47I GGWCC 3 cut(s) 152, 584, 1000
Eco57I CTGAAG 1 cut(s) 791
Eco91I GGTNACC 1 cut(s) 352
EcoO109I RGGNCCY 1 cut(s) 1000
EcoO65I GGTNACC 1 cut(s) 352
EcoRII CCWGG 6 cut(s) 91, 232, 363, 586, 655, 832
Esp3I CGTCTC 1 cut(s) 46
FaeI CATG 9 cut(s) 242, 451, 487, 678, 755, 845, 881, 1024, 1079
FatI CATG 9 cut(s) 238, 447, 483, 674, 751, 841, 877, 1020, 1075
FauI CCCGC 2 cut(s) 65, 164
FauNDI CATATG 1 cut(s) 1132
FbaI TGATCA 1 cut(s) 174
FokI GGATG 3 cut(s) 442, 880, 1100
FspBI CTAG 3 cut(s) 291, 864, 1044
GlaI GCGC 1 cut(s) 163
GsuI CTGGAG 2 cut(s) 34, 570
HaeIII GGCC 4 cut(s) 5, 330, 363, 832
HapII CCGG 2 cut(s) 132, 165
HhaI GCGC 1 cut(s) 164
Hin1II CATG 9 cut(s) 242, 451, 487, 678, 755, 845, 881, 1024, 1079
Hin6I GCGC 1 cut(s) 162
HinP1I GCGC 1 cut(s) 162
HinfI GANTC 3 cut(s) 635, 660, 780
HpaII CCGG 2 cut(s) 132, 165
HphI GGTGA 6 cut(s) 169, 329, 364, 838, 916, 1054
Hpy166II GTNNAC 2 cut(s) 584, 907
Hpy188I TCNGA 4 cut(s) 17, 127, 459, 1176
Hpy188III TCNNGA 8 cut(s) 395, 549, 562, 632, 809, 973, 1003, 1076
Hpy8I GTNNAC 2 cut(s) 584, 907
Hpy99I CGWCG 1 cut(s) 229
HpyAV CCTTC 6 cut(s) 84, 263, 430, 506, 766, 971
HpyCH4III ACNGT 4 cut(s) 10, 304, 527, 1159
HpyCH4IV ACGT 2 cut(s) 628, 1119
HpyCH4V TGCA 3 cut(s) 886, 1020, 1139
HpyF10VI GCNNNNNNNGC 7 cut(s) 26, 197, 206, 212, 218, 757, 838
HpyF3I CTNAG 7 cut(s) 386, 411, 458, 615, 819, 979, 1173
HpySE526I ACGT 2 cut(s) 628, 1119
Hsp92II CATG 9 cut(s) 242, 451, 487, 678, 755, 845, 881, 1024, 1079
HspAI GCGC 1 cut(s) 162
Ksp22I TGATCA 1 cut(s) 174
Kzo9I GATC 8 cut(s) 83, 122, 174, 295, 341, 382, 513, 651
LmnI GCTCC 8 cut(s) 17, 59, 134, 226, 440, 540, 838, 1195
Lsp1109I GCAGC 7 cut(s) 193, 196, 430, 700, 877, 1067, 1123
LweI GCATC 4 cut(s) 118, 193, 873, 1078
MabI ACCWGGT 1 cut(s) 586
MaeI CTAG 3 cut(s) 291, 864, 1044
MaeII ACGT 2 cut(s) 628, 1119
MaeIII GTNAC 4 cut(s) 352, 844, 1153, 1180
MalI GATC 8 cut(s) 85, 124, 176, 297, 343, 384, 515, 653
MbiI CCGCTC 1 cut(s) 221
MboI GATC 8 cut(s) 83, 122, 174, 295, 341, 382, 513, 651
MboII GAAGA 7 cut(s) 4, 239, 290, 293, 332, 803, 997
MfeI CAATTG 1 cut(s) 1095
MflI RGATCY 5 cut(s) 83, 122, 295, 382, 513
MhlI GDGCHC 1 cut(s) 621
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 4 cut(s) 465, 557, 1035, 1095
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 644
MmeI TCCRAC 1 cut(s) 543
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 2 cut(s) 246, 419
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 507, 854
MslI CAYNNNNRTG 1 cut(s) 428
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 2 cut(s) 132, 165
MspR9I CCNGG 6 cut(s) 93, 234, 365, 588, 657, 834
MunI CAATTG 1 cut(s) 1095
MvaI CCWGG 6 cut(s) 93, 234, 365, 588, 657, 834
MvnI CGCG 1 cut(s) 162
MwoI GCNNNNNNNGC 7 cut(s) 26, 197, 206, 212, 218, 757, 838
NdeI CATATG 1 cut(s) 1132
NdeII GATC 8 cut(s) 83, 122, 174, 295, 341, 382, 513, 651
NlaIII CATG 9 cut(s) 242, 451, 487, 678, 755, 845, 881, 1024, 1079
NlaIV GGNNCC 4 cut(s) 19, 154, 297, 1001
NmuCI GTSAC 4 cut(s) 352, 844, 1153, 1180
NspI RCATGY 4 cut(s) 678, 755, 845, 1024
NspV TTCGAA 1 cut(s) 721
PaeI GCATGC 2 cut(s) 678, 1024
PagI TCATGA 1 cut(s) 1075
PasI CCCWGGG 1 cut(s) 92
PceI AGGCCT 2 cut(s) 363, 832
PdmI GAANNNNTTC 2 cut(s) 246, 419
PfeI GAWTC 2 cut(s) 660, 780
PleI GAGTC 1 cut(s) 643
PpsI GAGTC 1 cut(s) 643
PpuMI RGGWCCY 1 cut(s) 1000
Psp5II RGGWCCY 1 cut(s) 1000
Psp6I CCWGG 6 cut(s) 91, 232, 363, 586, 655, 832
PspEI GGTNACC 1 cut(s) 352
PspGI CCWGG 6 cut(s) 91, 232, 363, 586, 655, 832
PspN4I GGNNCC 4 cut(s) 19, 154, 297, 1001
PspPI GGNCC 4 cut(s) 152, 328, 584, 1000
PspPPI RGGWCCY 1 cut(s) 1000
PsuI RGATCY 5 cut(s) 83, 122, 295, 382, 513
RsaI GTAC 2 cut(s) 347, 764
RsaNI GTAC 2 cut(s) 346, 763
RseI CAYNNNNRTG 1 cut(s) 428
SaqAI TTAA 2 cut(s) 507, 854
Sau3AI GATC 8 cut(s) 83, 122, 174, 295, 341, 382, 513, 651
Sau96I GGNCC 4 cut(s) 152, 328, 584, 1000
SchI GAGTC 1 cut(s) 644
ScrFI CCNGG 6 cut(s) 93, 234, 365, 588, 657, 834
SduI GDGCHC 1 cut(s) 621
SexAI ACCWGGT 1 cut(s) 586
SfaNI GCATC 4 cut(s) 118, 193, 873, 1078
SfuI TTCGAA 1 cut(s) 721
SinI GGWCC 3 cut(s) 152, 584, 1000
SmiMI CAYNNNNRTG 1 cut(s) 428
SmlI CTYRAG 2 cut(s) 632, 809
SmoI CTYRAG 2 cut(s) 632, 809
SphI GCATGC 2 cut(s) 678, 1024
Sse9I AATT 4 cut(s) 465, 557, 1035, 1095
SseBI AGGCCT 2 cut(s) 363, 832
SsiI CCGC 9 cut(s) 27, 30, 58, 157, 160, 212, 219, 1024, 1185
SspMI CTAG 3 cut(s) 291, 864, 1044
StuI AGGCCT 2 cut(s) 363, 832
StyD4I CCNGG 6 cut(s) 91, 232, 363, 586, 655, 832
TaaI ACNGT 4 cut(s) 10, 304, 527, 1159
TaiI ACGT 2 cut(s) 631, 1122
TaqI TCGA 4 cut(s) 227, 650, 721, 747
TasI AATT 4 cut(s) 465, 557, 1035, 1095
TatI WGTACW 1 cut(s) 762
TauI GCSGC 3 cut(s) 32, 162, 215
TfiI GAWTC 2 cut(s) 660, 780
Tru1I TTAA 2 cut(s) 507, 854
Tru9I TTAA 2 cut(s) 507, 854
TscAI CASTG 2 cut(s) 307, 987
TseFI GTSAC 4 cut(s) 352, 844, 1153, 1180
TseI GCWGC 7 cut(s) 206, 209, 443, 713, 890, 1055, 1136
Tsp45I GTSAC 4 cut(s) 352, 844, 1153, 1180
TspDTI ATGAA 5 cut(s) 255, 494, 722, 804, 1064
TspGWI ACGGA 2 cut(s) 28, 213
TspRI CASTG 2 cut(s) 307, 987
VpaK11BI GGWCC 3 cut(s) 152, 584, 1000
XceI RCATGY 4 cut(s) 678, 755, 845, 1024
XcmI CCANNNNNNNNNTGG 2 cut(s) 112, 545
XmnI GAANNNNTTC 2 cut(s) 246, 419
XspI CTAG 3 cut(s) 291, 864, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.