F-box FBD LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| FBD | PF08387 | 129 - 172 | 2.2e-17 | FBD |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 193 |
| AccII | CGCG | 1 cut(s) | 370 |
| AciI | CCGC | 1 cut(s) | 368 |
| AclWI | GGATC | 2 cut(s) | 83, 518 |
| AcuI | CTGAAG | 5 cut(s) | 96, 375, 504, 513, 521 |
| AfaI | GTAC | 1 cut(s) | 554 |
| AgsI | TTSAA | 4 cut(s) | 169, 201, 211, 442 |
| AjnI | CCWGG | 1 cut(s) | 236 |
| AluBI | AGCT | 6 cut(s) | 67, 158, 214, 312, 388, 562 |
| AluI | AGCT | 6 cut(s) | 67, 158, 214, 312, 388, 562 |
| Alw26I | GTCTC | 2 cut(s) | 413, 430 |
| AlwI | GGATC | 2 cut(s) | 83, 518 |
| ApeKI | GCWGC | 1 cut(s) | 312 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 325, 476 |
| AspS9I | GGNCC | 1 cut(s) | 359 |
| AsuHPI | GGTGA | 1 cut(s) | 261 |
| AsuII | TTCGAA | 1 cut(s) | 565 |
| AvaII | GGWCC | 1 cut(s) | 359 |
| BaeI | ACNNNNGTAYC | 1 cut(s) | 38 |
| BbvI | GCAGC | 1 cut(s) | 299 |
| BccI | CCATC | 1 cut(s) | 366 |
| BciT130I | CCWGG | 1 cut(s) | 238 |
| BciVI | GTATCC | 1 cut(s) | 139 |
| BcoDI | GTCTC | 2 cut(s) | 413, 430 |
| BfaI | CTAG | 3 cut(s) | 309, 396, 610 |
| BfmI | CTRYAG | 1 cut(s) | 278 |
| BfuAI | ACCTGC | 1 cut(s) | 193 |
| BfuI | GTATCC | 1 cut(s) | 139 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 373 |
| BisI | GCNGC | 2 cut(s) | 313, 368 |
| BlsI | GCNGC | 2 cut(s) | 314, 369 |
| Bme1390I | CCNGG | 1 cut(s) | 238 |
| Bme18I | GGWCC | 1 cut(s) | 359 |
| BmgT120I | GGNCC | 1 cut(s) | 359 |
| BmiI | GGNNCC | 1 cut(s) | 573 |
| BmrFI | CCNGG | 1 cut(s) | 238 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 410, 442 |
| Bpu14I | TTCGAA | 1 cut(s) | 565 |
| BpuEI | CTTGAG | 2 cut(s) | 437, 502 |
| BsaBI | GATNNNNATC | 2 cut(s) | 87, 512 |
| BsaJI | CCNNGG | 1 cut(s) | 237 |
| BsaWI | WCCGGW | 1 cut(s) | 382 |
| Bse1I | ACTGG | 2 cut(s) | 57, 132 |
| Bse8I | GATNNNNATC | 2 cut(s) | 87, 512 |
| BseBI | CCWGG | 1 cut(s) | 238 |
| BseDI | CCNNGG | 1 cut(s) | 237 |
| BseJI | GATNNNNATC | 2 cut(s) | 87, 512 |
| BseMII | CTCAG | 2 cut(s) | 116, 321 |
| BseNI | ACTGG | 2 cut(s) | 57, 132 |
| BseXI | GCAGC | 1 cut(s) | 299 |
| Bsh1236I | CGCG | 1 cut(s) | 370 |
| BsiSI | CCGG | 1 cut(s) | 383 |
| BslFI | GGGAC | 1 cut(s) | 459 |
| BsmAI | GTCTC | 2 cut(s) | 413, 430 |
| BsmFI | GGGAC | 1 cut(s) | 459 |
| Bsp119I | TTCGAA | 1 cut(s) | 565 |
| Bsp1407I | TGTACA | 1 cut(s) | 552 |
| Bsp143I | GATC | 3 cut(s) | 88, 266, 523 |
| BspACI | CCGC | 1 cut(s) | 368 |
| BspCNI | CTCAG | 2 cut(s) | 115, 322 |
| BspFNI | CGCG | 1 cut(s) | 370 |
| BspLI | GGNNCC | 1 cut(s) | 573 |
| BspMAI | CTGCAG | 1 cut(s) | 282 |
| BspMI | ACCTGC | 1 cut(s) | 193 |
| BspPI | GGATC | 2 cut(s) | 83, 518 |
| BspT104I | TTCGAA | 1 cut(s) | 565 |
| BsrGI | TGTACA | 1 cut(s) | 552 |
| BsrI | ACTGG | 2 cut(s) | 57, 132 |
| BssECI | CCNNGG | 1 cut(s) | 237 |
| BssMI | GATC | 3 cut(s) | 88, 266, 523 |
| Bst2UI | CCWGG | 1 cut(s) | 238 |
| Bst4CI | ACNGT | 1 cut(s) | 424 |
| Bst6I | CTCTTC | 2 cut(s) | 279, 523 |
| BstAUI | TGTACA | 1 cut(s) | 552 |
| BstBI | TTCGAA | 1 cut(s) | 565 |
| BstC8I | GCNNGC | 3 cut(s) | 378, 534, 592 |
| BstDEI | CTNAG | 2 cut(s) | 102, 330 |
| BstFNI | CGCG | 1 cut(s) | 370 |
| BstKTI | GATC | 3 cut(s) | 91, 269, 526 |
| BstMAI | GTCTC | 2 cut(s) | 413, 430 |
| BstMBI | GATC | 3 cut(s) | 88, 266, 523 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 373 |
| BstNI | CCWGG | 1 cut(s) | 238 |
| BstNSI | RCATGY | 1 cut(s) | 380 |
| BstSCI | CCNGG | 1 cut(s) | 236 |
| BstSFI | CTRYAG | 1 cut(s) | 278 |
| BstUI | CGCG | 1 cut(s) | 370 |
| BstV1I | GCAGC | 1 cut(s) | 299 |
| BstX2I | RGATCY | 2 cut(s) | 88, 523 |
| BstYI | RGATCY | 2 cut(s) | 88, 523 |
| BsuI | GTATCC | 1 cut(s) | 139 |
| BtgZI | GCGATG | 1 cut(s) | 385 |
| BtsI | GCAGTG | 1 cut(s) | 287 |
| BtsIMutI | CAGTG | 2 cut(s) | 139, 287 |
| BveI | ACCTGC | 1 cut(s) | 193 |
| Cac8I | GCNNGC | 3 cut(s) | 378, 534, 592 |
| Cfr13I | GGNCC | 1 cut(s) | 359 |
| Csp6I | GTAC | 1 cut(s) | 553 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 447, 482 |
| CviAII | CATG | 1 cut(s) | 377 |
| CviQI | GTAC | 1 cut(s) | 553 |
| DdeI | CTNAG | 2 cut(s) | 102, 330 |
| DpnI | GATC | 3 cut(s) | 90, 268, 525 |
| DpnII | GATC | 3 cut(s) | 88, 266, 523 |
| Eam1104I | CTCTTC | 2 cut(s) | 279, 523 |
| EarI | CTCTTC | 2 cut(s) | 279, 523 |
| Eco47I | GGWCC | 1 cut(s) | 359 |
| Eco57I | CTGAAG | 5 cut(s) | 96, 375, 504, 513, 521 |
| EcoRII | CCWGG | 1 cut(s) | 236 |
| FaeI | CATG | 1 cut(s) | 380 |
| FaiI | YATR | 2 cut(s) | 300, 378 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 11, 43, 464, 496, 533, 565 |
| FaqI | GGGAC | 1 cut(s) | 459 |
| FatI | CATG | 1 cut(s) | 376 |
| Fnu4HI | GCNGC | 2 cut(s) | 313, 368 |
| Fsp4HI | GCNGC | 2 cut(s) | 313, 368 |
| FspBI | CTAG | 3 cut(s) | 309, 396, 610 |
| GluI | GCNGC | 2 cut(s) | 313, 368 |
| HapII | CCGG | 1 cut(s) | 383 |
| Hin1II | CATG | 1 cut(s) | 380 |
| HindIII | AAGCTT | 1 cut(s) | 560 |
| HinfI | GANTC | 5 cut(s) | 41, 176, 338, 344, 438 |
| HpaII | CCGG | 1 cut(s) | 383 |
| HphI | GGTGA | 1 cut(s) | 261 |
| Hpy188I | TCNGA | 7 cut(s) | 140, 331, 343, 493, 501, 523, 586 |
| Hpy188III | TCNNGA | 1 cut(s) | 481 |
| HpyAV | CCTTC | 1 cut(s) | 350 |
| HpyCH4III | ACNGT | 1 cut(s) | 424 |
| HpyCH4V | TGCA | 5 cut(s) | 280, 315, 380, 536, 594 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 373 |
| HpyF3I | CTNAG | 2 cut(s) | 102, 330 |
| Hsp92II | CATG | 1 cut(s) | 380 |
| Kzo9I | GATC | 3 cut(s) | 88, 266, 523 |
| LmnI | GCTCC | 1 cut(s) | 385 |
| Lsp1109I | GCAGC | 1 cut(s) | 299 |
| MaeI | CTAG | 3 cut(s) | 309, 396, 610 |
| MaeIII | GTNAC | 1 cut(s) | 106 |
| MalI | GATC | 3 cut(s) | 90, 268, 525 |
| MboI | GATC | 3 cut(s) | 88, 266, 523 |
| MboII | GAAGA | 4 cut(s) | 266, 510, 514, 517 |
| MflI | RGATCY | 2 cut(s) | 88, 523 |
| MluCI | AATT | 3 cut(s) | 196, 206, 219 |
| MlyI | GAGTC | 1 cut(s) | 338 |
| MnlI | CCTC | 5 cut(s) | 102, 282, 427, 477, 580 |
| MroXI | GAANNNNTTC | 2 cut(s) | 325, 476 |
| MseI | TTAA | 2 cut(s) | 261, 404 |
| MspI | CCGG | 1 cut(s) | 383 |
| MspR9I | CCNGG | 1 cut(s) | 238 |
| MvaI | CCWGG | 1 cut(s) | 238 |
| MvnI | CGCG | 1 cut(s) | 370 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 373 |
| NdeII | GATC | 3 cut(s) | 88, 266, 523 |
| NlaIII | CATG | 1 cut(s) | 380 |
| NlaIV | GGNNCC | 1 cut(s) | 573 |
| NspI | RCATGY | 1 cut(s) | 380 |
| NspV | TTCGAA | 1 cut(s) | 565 |
| PaeI | GCATGC | 1 cut(s) | 380 |
| PdmI | GAANNNNTTC | 2 cut(s) | 325, 476 |
| PfeI | GAWTC | 4 cut(s) | 41, 176, 338, 438 |
| PkrI | GCNGC | 2 cut(s) | 314, 369 |
| PleI | GAGTC | 1 cut(s) | 338 |
| PpsI | GAGTC | 1 cut(s) | 338 |
| Psp6I | CCWGG | 1 cut(s) | 236 |
| PspGI | CCWGG | 1 cut(s) | 236 |
| PspN4I | GGNNCC | 1 cut(s) | 573 |
| PspPI | GGNCC | 1 cut(s) | 359 |
| PstI | CTGCAG | 1 cut(s) | 282 |
| PsuI | RGATCY | 2 cut(s) | 88, 523 |
| RsaI | GTAC | 1 cut(s) | 554 |
| RsaNI | GTAC | 1 cut(s) | 553 |
| SaqAI | TTAA | 2 cut(s) | 261, 404 |
| SatI | GCNGC | 2 cut(s) | 313, 368 |
| Sau3AI | GATC | 3 cut(s) | 88, 266, 523 |
| Sau96I | GGNCC | 1 cut(s) | 359 |
| SchI | GAGTC | 1 cut(s) | 338 |
| ScrFI | CCNGG | 1 cut(s) | 238 |
| SfcI | CTRYAG | 1 cut(s) | 278 |
| SfuI | TTCGAA | 1 cut(s) | 565 |
| SinI | GGWCC | 1 cut(s) | 359 |
| SmlI | CTYRAG | 2 cut(s) | 416, 481 |
| SmoI | CTYRAG | 2 cut(s) | 416, 481 |
| SphI | GCATGC | 1 cut(s) | 380 |
| Sse9I | AATT | 3 cut(s) | 196, 206, 219 |
| SsiI | CCGC | 1 cut(s) | 368 |
| SspI | AATATT | 1 cut(s) | 326 |
| SspMI | CTAG | 3 cut(s) | 309, 396, 610 |
| StyD4I | CCNGG | 1 cut(s) | 236 |
| TaaI | ACNGT | 1 cut(s) | 424 |
| TaqI | TCGA | 3 cut(s) | 174, 204, 565 |
| TasI | AATT | 3 cut(s) | 196, 206, 219 |
| TatI | WGTACW | 1 cut(s) | 552 |
| TauI | GCSGC | 1 cut(s) | 370 |
| TfiI | GAWTC | 4 cut(s) | 41, 176, 338, 438 |
| Tru1I | TTAA | 2 cut(s) | 261, 404 |
| Tru9I | TTAA | 2 cut(s) | 261, 404 |
| TscAI | CASTG | 2 cut(s) | 139, 287 |
| TseI | GCWGC | 1 cut(s) | 312 |
| TspDTI | ATGAA | 1 cut(s) | 62 |
| TspGWI | ACGGA | 1 cut(s) | 266 |
| TspRI | CASTG | 2 cut(s) | 139, 287 |
| VpaK11BI | GGWCC | 1 cut(s) | 359 |
| XceI | RCATGY | 1 cut(s) | 380 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 369 |
| XmnI | GAANNNNTTC | 2 cut(s) | 325, 476 |
| XspI | CTAG | 3 cut(s) | 309, 396, 610 |