RchiOBHm_Chr5g0028521

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000062
Physical Location & Seq
Forward (+)
22328500 .. 22331745
3246 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ30796

Sequence Viewer

Length: 1254 bp
ATGGTTCCGCAATCCAACAGTCGACTGAGGGTTCAAGATAGGGTCAGTGAACTACCAGATGCAGTTTTGTGTCACATACTTAGTTTCCTTGGACCAGATTATGCAAAGTGTGCTGTCAGGACCAGTATTTTGTCTAAGAGATGGAAGAACATGTGGGCCTGTGCTCCCACTGTGAATTTGAACAGTCGAGATTTCTCCTCCTCTGCTGATTTCATAGCGTTTGCTGATCGTTTTCTTCTTCTTCGTGACTCATCAACCATTCAAAAGTTGTATCTTCATTTCATTCTTTGCTCTGCTGAAGATTTCTCTCGTGTTGATGCTTGGATTCGCACTGCTATTAGGTGTAACGTGGTGGAGCTTGATCTTTGTGTCTATTCAGATGGAGTGTGTTTCCCAAGTCTCAAATTCTTCTACGTTACTGTCCCTACTGATAAAGACTCCATGGATTTTTCTCATTGCCCTGCGCTGGAACATTTAACTATAGATGGATATCATGGAGAGGATGGTGTTTATCTCAACATCTCTGTGTCTGAACTGAAGACGTTGAAGATAACTAGTACAGATATATACAGTGTTAACATCAATGCCCCAAAACTTGAAAAACTTGATCTCAAGGAGTCGGTTTTGTCAGATTATGACTTGGAGAATACAAAATCCCTAGTTGAAGCTAATATTTATCTCTATCACGAAGAGGAAGAAGGCGACGAAGAGGATGCTGCTGTCTGTGCAACTAATCTCTTGGAAGGAATTTCCGGTGTTAAATATCTGTTCCTTTCCTCTCGTATCTGTGAGAATTGTTCTGTGCCTGCTTTTGATAATTTGAGCAAATTGACGCTAGCTCTTCATAGCGGCTGTTATGGGTGGGGAATTCTAACGATGTTGTTGGAGAGAGCATCAAATCTAGAATGTCTTGTGTTGGAACATGACCATCATCATTATCCCGCCTATTGTGAGTCGGTGATTGAACTTGAAGATCCTATTGAAGTTCCCCCTGAAGTAGTTATATGGAGTCCACCAGAGTCTGTTCCTAAATGTGTGTCGTCACACCTCAAGAGTGTCTCCTTAAAGGGATTCCAGGGAAAGCATTTCTGGGGACATGTAGATGAAATGGAAGTGCTCAAGTATTTACTAGAGAATGGTCAAGTTTTGAAGGAGATGACTATTTACACTGAGTTTCTAGAACAGGAGTTGTACGGTGAACTTTCAAGGTTTGAATGGGGTTCAGAGACTTGTCAAGTTGAGATTATCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

417

Amino Acids

47.28

Weight (kDa)

4.76

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 134 - 359 8.8e-07 At1g61320/AtMIF1, LRR domain
FBD PF08387 339 - 388 8.6e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 22
AciI CCGC 3 cut(s) 8, 849, 942
AclWI GGATC 1 cut(s) 968
AcsI RAATTY 4 cut(s) 175, 404, 747, 867
AcuI CTGAAG 3 cut(s) 318, 557, 1014
AfaI GTAC 2 cut(s) 559, 1193
AfiI CCNNNNNNNGG 1 cut(s) 466
AflIII ACRYGT 2 cut(s) 150, 1096
AhlI ACTAGT 1 cut(s) 554
AjnI CCWGG 1 cut(s) 1074
AluBI AGCT 3 cut(s) 358, 668, 839
AluI AGCT 3 cut(s) 358, 668, 839
Alw21I GWGCWC 2 cut(s) 166, 1119
Alw26I GTCTC 3 cut(s) 404, 1063, 1220
AlwI GGATC 1 cut(s) 968
AlwNI CAGNNNCTG 1 cut(s) 1022
AoxI GGCC 1 cut(s) 156
ApeKI GCWGC 1 cut(s) 716
ApoI RAATTY 4 cut(s) 175, 404, 747, 867
ArsI GACNNNNNNTTYG 2 cut(s) 112, 144
AspLEI GCGC 1 cut(s) 466
AspS9I GGNCC 3 cut(s) 92, 120, 156
AsuHPI GGTGA 2 cut(s) 970, 1208
AsuNHI GCTAGC 1 cut(s) 835
AvaII GGWCC 2 cut(s) 92, 120
BauI CACGAG 1 cut(s) 309
BbsI GAAGAC 1 cut(s) 545
Bbv12I GWGCWC 2 cut(s) 166, 1119
BbvI GCAGC 1 cut(s) 703
BccI CCATC 5 cut(s) 135, 374, 479, 497, 936
BcgI CGANNNNNNTGC 2 cut(s) 695, 729
BciT130I CCWGG 1 cut(s) 1076
BcoDI GTCTC 3 cut(s) 404, 1063, 1220
BcuI ACTAGT 1 cut(s) 554
BfaI CTAG 6 cut(s) 555, 659, 836, 902, 1130, 1178
BfmI CTRYAG 1 cut(s) 480
BisI GCNGC 2 cut(s) 717, 850
BlsI GCNGC 2 cut(s) 718, 851
Bme1390I CCNGG 1 cut(s) 1076
Bme18I GGWCC 2 cut(s) 92, 120
BmgT120I GGNCC 3 cut(s) 92, 120, 156
BmiI GGNNCC 1 cut(s) 6
BmrFI CCNGG 1 cut(s) 1076
BmsI GCATC 4 cut(s) 49, 307, 703, 902
BmtI GCTAGC 1 cut(s) 839
BpiI GAAGAC 1 cut(s) 545
BpuEI CTTGAG 3 cut(s) 596, 1034, 1103
BsaBI GATNNNNATC 1 cut(s) 489
BsaJI CCNNGG 3 cut(s) 88, 441, 1075
BsaWI WCCGGW 1 cut(s) 752
Bsc4I CCNNNNNNNGG 1 cut(s) 466
Bse1I ACTGG 1 cut(s) 123
Bse3DI GCAATG 1 cut(s) 454
Bse8I GATNNNNATC 1 cut(s) 489
BseBI CCWGG 1 cut(s) 1076
BseDI CCNNGG 3 cut(s) 88, 441, 1075
BseGI GGATG 2 cut(s) 508, 718
BseJI GATNNNNATC 1 cut(s) 489
BseLI CCNNNNNNNGG 1 cut(s) 466
BseMI GCAATG 1 cut(s) 454
BseMII CTCAG 2 cut(s) 17, 1161
BseNI ACTGG 1 cut(s) 123
BseRI GAGGAG 2 cut(s) 187, 190
BseXI GCAGC 1 cut(s) 703
BshFI GGCC 1 cut(s) 158
BsiHKAI GWGCWC 2 cut(s) 166, 1119
BsiSI CCGG 1 cut(s) 753
BslFI GGGAC 2 cut(s) 407, 1107
BslI CCNNNNNNNGG 1 cut(s) 466
BsmAI GTCTC 3 cut(s) 404, 1063, 1220
BsmFI GGGAC 2 cut(s) 407, 1107
BsnI GGCC 1 cut(s) 158
Bsp1286I GDGCHC 2 cut(s) 166, 1119
Bsp143I GATC 4 cut(s) 226, 361, 607, 973
Bsp19I CCATGG 1 cut(s) 441
BspACI CCGC 3 cut(s) 8, 849, 942
BspANI GGCC 1 cut(s) 158
BspCNI CTCAG 2 cut(s) 18, 1162
BspLI GGNNCC 1 cut(s) 6
BspOI GCTAGC 1 cut(s) 839
BspPI GGATC 1 cut(s) 968
BspQI GCTCTTC 1 cut(s) 846
BsrDI GCAATG 1 cut(s) 454
BsrI ACTGG 1 cut(s) 123
BssECI CCNNGG 3 cut(s) 88, 441, 1075
BssMI GATC 4 cut(s) 226, 361, 607, 973
BssSI CACGAG 1 cut(s) 309
BssT1I CCWWGG 2 cut(s) 88, 441
Bst2BI CACGAG 1 cut(s) 309
Bst2UI CCWGG 1 cut(s) 1076
Bst4CI ACNGT 6 cut(s) 20, 172, 185, 421, 572, 1196
Bst6I CTCTTC 3 cut(s) 684, 702, 846
BstAPI GCANNNNNTGC 1 cut(s) 110
BstC8I GCNNGC 2 cut(s) 807, 837
BstDEI CTNAG 4 cut(s) 26, 80, 135, 1170
BstDSI CCRYGG 1 cut(s) 441
BstF5I GGATG 2 cut(s) 508, 718
BstHHI GCGC 1 cut(s) 466
BstKTI GATC 4 cut(s) 229, 364, 610, 976
BstMAI GTCTC 3 cut(s) 404, 1063, 1220
BstMBI GATC 4 cut(s) 226, 361, 607, 973
BstMWI GCNNNNNNNGC 2 cut(s) 110, 725
BstNI CCWGG 1 cut(s) 1076
BstNSI RCATGY 2 cut(s) 154, 1100
BstSCI CCNGG 1 cut(s) 1074
BstSFI CTRYAG 1 cut(s) 480
BstV1I GCAGC 1 cut(s) 703
BstV2I GAAGAC 1 cut(s) 545
BstX2I RGATCY 1 cut(s) 973
BstYI RGATCY 1 cut(s) 973
BsuRI GGCC 1 cut(s) 158
BtgI CCRYGG 1 cut(s) 441
BtsCI GGATG 2 cut(s) 508, 718
BtsI GCAGTG 1 cut(s) 330
BtsIMutI CAGTG 5 cut(s) 52, 168, 330, 577, 1167
Cac8I GCNNGC 2 cut(s) 807, 837
CaiI CAGNNNCTG 1 cut(s) 1022
CfoI GCGC 1 cut(s) 466
Cfr13I GGNCC 3 cut(s) 92, 120, 156
CseI GACGC 1 cut(s) 841
Csp6I GTAC 2 cut(s) 558, 1192
CviAII CATG 5 cut(s) 151, 442, 494, 923, 1097
CviJI RGCY 5 cut(s) 158, 358, 668, 839, 852
CviKI_1 RGCY 5 cut(s) 158, 358, 668, 839, 852
CviQI GTAC 2 cut(s) 558, 1192
DdeI CTNAG 4 cut(s) 26, 80, 135, 1170
DpnI GATC 4 cut(s) 228, 363, 609, 975
DpnII GATC 4 cut(s) 226, 361, 607, 973
Eam1104I CTCTTC 3 cut(s) 684, 702, 846
EarI CTCTTC 3 cut(s) 684, 702, 846
Eco130I CCWWGG 2 cut(s) 88, 441
Eco32I GATATC 1 cut(s) 491
Eco47I GGWCC 2 cut(s) 92, 120
Eco57I CTGAAG 3 cut(s) 318, 557, 1014
EcoRI GAATTC 1 cut(s) 867
EcoRII CCWGG 1 cut(s) 1074
EcoRV GATATC 1 cut(s) 491
EcoT14I CCWWGG 2 cut(s) 88, 441
ErhI CCWWGG 2 cut(s) 88, 441
FaeI CATG 5 cut(s) 154, 445, 497, 926, 1100
FaqI GGGAC 2 cut(s) 407, 1107
FatI CATG 5 cut(s) 150, 441, 493, 922, 1096
FauI CCCGC 1 cut(s) 949
FblI GTMKAC 1 cut(s) 22
Fnu4HI GCNGC 2 cut(s) 717, 850
FokI GGATG 2 cut(s) 515, 725
Fsp4HI GCNGC 2 cut(s) 717, 850
FspBI CTAG 6 cut(s) 555, 659, 836, 902, 1130, 1178
GlaI GCGC 1 cut(s) 465
GluI GCNGC 2 cut(s) 717, 850
HaeIII GGCC 1 cut(s) 158
HapII CCGG 1 cut(s) 753
HgaI GACGC 1 cut(s) 841
HhaI GCGC 1 cut(s) 466
Hin1II CATG 5 cut(s) 154, 445, 497, 926, 1100
Hin6I GCGC 1 cut(s) 464
HinP1I GCGC 1 cut(s) 464
HincII GTYRAC 2 cut(s) 23, 577
HindII GTYRAC 2 cut(s) 23, 577
HinfI GANTC 8 cut(s) 248, 325, 437, 617, 953, 1009, 1019, 1071
HpaI GTTAAC 1 cut(s) 577
HpaII CCGG 1 cut(s) 753
HphI GGTGA 2 cut(s) 970, 1208
Hpy166II GTNNAC 5 cut(s) 23, 50, 577, 1013, 1199
Hpy188I TCNGA 4 cut(s) 379, 532, 631, 1225
Hpy188III TCNNGA 8 cut(s) 35, 118, 188, 245, 686, 902, 1051, 1178
Hpy8I GTNNAC 5 cut(s) 23, 50, 577, 1013, 1199
Hpy99I CGWCG 1 cut(s) 707
HpyAV CCTTC 3 cut(s) 692, 737, 1144
HpyCH4III ACNGT 6 cut(s) 20, 172, 185, 421, 572, 1196
HpyCH4IV ACGT 3 cut(s) 348, 414, 542
HpyCH4V TGCA 3 cut(s) 62, 104, 728
HpyF10VI GCNNNNNNNGC 2 cut(s) 110, 725
HpyF3I CTNAG 4 cut(s) 26, 80, 135, 1170
HpySE526I ACGT 3 cut(s) 348, 414, 542
Hsp92II CATG 5 cut(s) 154, 445, 497, 926, 1100
HspAI GCGC 1 cut(s) 464
KspAI GTTAAC 1 cut(s) 577
Kzo9I GATC 4 cut(s) 226, 361, 607, 973
LguI GCTCTTC 1 cut(s) 846
LmnI GCTCC 2 cut(s) 169, 355
Lsp1109I GCAGC 1 cut(s) 703
LweI GCATC 4 cut(s) 49, 307, 703, 902
MaeI CTAG 6 cut(s) 555, 659, 836, 902, 1130, 1178
MaeII ACGT 3 cut(s) 348, 414, 542
MaeIII GTNAC 5 cut(s) 71, 245, 344, 415, 1041
MalI GATC 4 cut(s) 228, 363, 609, 975
MboI GATC 4 cut(s) 226, 361, 607, 973
MflI RGATCY 1 cut(s) 973
MhlI GDGCHC 2 cut(s) 166, 1119
MluCI AATT 7 cut(s) 175, 404, 747, 793, 817, 827, 867
MlyI GAGTC 6 cut(s) 242, 431, 626, 962, 1018, 1028
MmeI TCCRAC 3 cut(s) 39, 864, 897
MnlI CCTC 8 cut(s) 21, 208, 211, 493, 685, 703, 787, 1058
MseI TTAA 4 cut(s) 476, 576, 759, 1064
MslI CAYNNNNRTG 2 cut(s) 524, 1101
MspI CCGG 1 cut(s) 753
MspR9I CCNGG 1 cut(s) 1076
MvaI CCWGG 1 cut(s) 1076
MwoI GCNNNNNNNGC 2 cut(s) 110, 725
NcoI CCATGG 1 cut(s) 441
NdeII GATC 4 cut(s) 226, 361, 607, 973
NheI GCTAGC 1 cut(s) 835
NlaIII CATG 5 cut(s) 154, 445, 497, 926, 1100
NlaIV GGNNCC 1 cut(s) 6
NmuCI GTSAC 3 cut(s) 71, 245, 1041
NspI RCATGY 2 cut(s) 154, 1100
PciI ACATGT 2 cut(s) 150, 1096
PciSI GCTCTTC 1 cut(s) 846
PfeI GAWTC 2 cut(s) 325, 1071
PkrI GCNGC 2 cut(s) 718, 851
PleI GAGTC 6 cut(s) 242, 431, 625, 961, 1017, 1027
PpsI GAGTC 6 cut(s) 242, 431, 625, 961, 1017, 1027
PscI ACATGT 2 cut(s) 150, 1096
Psp6I CCWGG 1 cut(s) 1074
PspGI CCWGG 1 cut(s) 1074
PspN4I GGNNCC 1 cut(s) 6
PspPI GGNCC 3 cut(s) 92, 120, 156
PstNI CAGNNNCTG 1 cut(s) 1022
PsuI RGATCY 1 cut(s) 973
RsaI GTAC 2 cut(s) 559, 1193
RsaNI GTAC 2 cut(s) 558, 1192
RseI CAYNNNNRTG 2 cut(s) 524, 1101
SalI GTCGAC 1 cut(s) 21
SapI GCTCTTC 1 cut(s) 846
SaqAI TTAA 4 cut(s) 476, 576, 759, 1064
SatI GCNGC 2 cut(s) 717, 850
Sau3AI GATC 4 cut(s) 226, 361, 607, 973
Sau96I GGNCC 3 cut(s) 92, 120, 156
SchI GAGTC 6 cut(s) 242, 431, 626, 962, 1018, 1028
ScrFI CCNGG 1 cut(s) 1076
SduI GDGCHC 2 cut(s) 166, 1119
SetI ASST 9 cut(s) 344, 351, 360, 417, 545, 670, 841, 1050, 1211
SfaNI GCATC 4 cut(s) 49, 307, 703, 902
SfcI CTRYAG 1 cut(s) 480
SinI GGWCC 2 cut(s) 92, 120
SmiMI CAYNNNNRTG 2 cut(s) 524, 1101
SmlI CTYRAG 3 cut(s) 611, 1049, 1118
SmoI CTYRAG 3 cut(s) 611, 1049, 1118
SpeI ACTAGT 1 cut(s) 554
Sse9I AATT 7 cut(s) 175, 404, 747, 793, 817, 827, 867
SsiI CCGC 3 cut(s) 8, 849, 942
SspI AATATT 1 cut(s) 673
SspMI CTAG 6 cut(s) 555, 659, 836, 902, 1130, 1178
StyD4I CCNGG 1 cut(s) 1074
StyI CCWWGG 2 cut(s) 88, 441
TaaI ACNGT 6 cut(s) 20, 172, 185, 421, 572, 1196
TaiI ACGT 3 cut(s) 351, 417, 545
TaqI TCGA 2 cut(s) 22, 187
TasI AATT 7 cut(s) 175, 404, 747, 793, 817, 827, 867
TatI WGTACW 1 cut(s) 557
TauI GCSGC 1 cut(s) 852
TfiI GAWTC 2 cut(s) 325, 1071
Tru1I TTAA 4 cut(s) 476, 576, 759, 1064
Tru9I TTAA 4 cut(s) 476, 576, 759, 1064
TscAI CASTG 5 cut(s) 52, 175, 337, 577, 1174
TseFI GTSAC 3 cut(s) 71, 245, 1041
TseI GCWGC 1 cut(s) 716
Tsp45I GTSAC 3 cut(s) 71, 245, 1041
TspDTI ATGAA 5 cut(s) 202, 266, 271, 833, 1119
TspRI CASTG 5 cut(s) 52, 175, 337, 577, 1174
VpaK11BI GGWCC 2 cut(s) 92, 120
XapI RAATTY 4 cut(s) 175, 404, 747, 867
XbaI TCTAGA 2 cut(s) 901, 1177
XceI RCATGY 2 cut(s) 154, 1100
XmiI GTMKAC 1 cut(s) 22
XspI CTAG 6 cut(s) 555, 659, 836, 902, 1130, 1178
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.