F-box LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| F-box | PF00646 | 214 - 253 | 1.2e-08 | F-box domain |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 515 |
| Acc65I | GGTACC | 2 cut(s) | 154, 416 |
| AccB1I | GGYRCC | 2 cut(s) | 154, 416 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 729 |
| AciI | CCGC | 2 cut(s) | 549, 992 |
| AclWI | GGATC | 1 cut(s) | 647 |
| AcsI | RAATTY | 3 cut(s) | 124, 322, 854 |
| AcuI | CTGAAG | 1 cut(s) | 368 |
| AcyI | GRCGYC | 1 cut(s) | 512 |
| AfaI | GTAC | 2 cut(s) | 156, 418 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 729, 1061, 1080 |
| AjiI | CACGTC | 1 cut(s) | 783 |
| AjnI | CCWGG | 1 cut(s) | 59 |
| AluBI | AGCT | 5 cut(s) | 178, 256, 397, 577, 629 |
| AluI | AGCT | 5 cut(s) | 178, 256, 397, 577, 629 |
| Alw26I | GTCTC | 3 cut(s) | 138, 206, 1082 |
| AlwI | GGATC | 1 cut(s) | 647 |
| AoxI | GGCC | 1 cut(s) | 744 |
| ApeKI | GCWGC | 2 cut(s) | 267, 776 |
| ApoI | RAATTY | 3 cut(s) | 124, 322, 854 |
| AseI | ATTAAT | 1 cut(s) | 1047 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 257, 660 |
| Asp718I | GGTACC | 2 cut(s) | 154, 416 |
| AspS9I | GGNCC | 4 cut(s) | 57, 208, 425, 744 |
| AsuHPI | GGTGA | 2 cut(s) | 35, 445 |
| AsuII | TTCGAA | 1 cut(s) | 850 |
| AvaII | GGWCC | 3 cut(s) | 57, 208, 425 |
| BanI | GGYRCC | 2 cut(s) | 154, 416 |
| BbsI | GAAGAC | 1 cut(s) | 356 |
| BbvI | GCAGC | 2 cut(s) | 254, 788 |
| BccI | CCATC | 6 cut(s) | 442, 723, 867, 926, 956, 1166 |
| BceAI | ACGGC | 1 cut(s) | 897 |
| BciT130I | CCWGG | 1 cut(s) | 61 |
| BciVI | GTATCC | 1 cut(s) | 57 |
| BcoDI | GTCTC | 3 cut(s) | 138, 206, 1082 |
| BfaI | CTAG | 3 cut(s) | 278, 711, 1013 |
| BfmI | CTRYAG | 1 cut(s) | 1167 |
| BfuI | GTATCC | 1 cut(s) | 57 |
| BisI | GCNGC | 3 cut(s) | 268, 777, 992 |
| BlsI | GCNGC | 3 cut(s) | 269, 778, 993 |
| Bme1390I | CCNGG | 1 cut(s) | 61 |
| Bme18I | GGWCC | 3 cut(s) | 57, 208, 425 |
| BmgBI | CACGTC | 1 cut(s) | 783 |
| BmgT120I | GGNCC | 4 cut(s) | 57, 208, 425, 744 |
| BmiI | GGNNCC | 5 cut(s) | 9, 156, 418, 426, 1085 |
| BmrFI | CCNGG | 1 cut(s) | 61 |
| BmrI | ACTGGG | 3 cut(s) | 192, 804, 1068 |
| BmsI | GCATC | 2 cut(s) | 205, 763 |
| BmuI | ACTGGG | 3 cut(s) | 192, 804, 1068 |
| BpiI | GAAGAC | 1 cut(s) | 356 |
| BpmI | CTGGAG | 2 cut(s) | 508, 1092 |
| Bpu10I | CCTNAGC | 1 cut(s) | 987 |
| Bpu14I | TTCGAA | 1 cut(s) | 850 |
| BpuEI | CTTGAG | 1 cut(s) | 188 |
| BsaHI | GRCGYC | 1 cut(s) | 512 |
| BsaJI | CCNNGG | 1 cut(s) | 420 |
| BsaWI | WCCGGW | 2 cut(s) | 54, 427 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 300, 330 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 729, 1061, 1080 |
| Bse1I | ACTGG | 4 cut(s) | 198, 525, 799, 1074 |
| Bse3DI | GCAATG | 1 cut(s) | 1128 |
| BseBI | CCWGG | 1 cut(s) | 61 |
| BseDI | CCNNGG | 1 cut(s) | 420 |
| BseGI | GGATG | 4 cut(s) | 229, 453, 918, 1207 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 729, 1061, 1080 |
| BseMI | GCAATG | 1 cut(s) | 1128 |
| BseMII | CTCAG | 3 cut(s) | 48, 601, 1093 |
| BseNI | ACTGG | 4 cut(s) | 198, 525, 799, 1074 |
| BseRI | GAGGAG | 1 cut(s) | 822 |
| BseXI | GCAGC | 2 cut(s) | 254, 788 |
| BsgI | GTGCAG | 2 cut(s) | 258, 321 |
| BshFI | GGCC | 1 cut(s) | 746 |
| BshNI | GGYRCC | 2 cut(s) | 154, 416 |
| BsiSI | CCGG | 2 cut(s) | 55, 428 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 729, 1061, 1080 |
| BsmAI | GTCTC | 3 cut(s) | 138, 206, 1082 |
| BsmI | GAATGC | 1 cut(s) | 409 |
| BsnI | GGCC | 1 cut(s) | 746 |
| Bsp119I | TTCGAA | 1 cut(s) | 850 |
| Bsp143I | GATC | 3 cut(s) | 639, 814, 943 |
| BspACI | CCGC | 2 cut(s) | 549, 992 |
| BspANI | GGCC | 1 cut(s) | 746 |
| BspCNI | CTCAG | 3 cut(s) | 47, 600, 1092 |
| BspLI | GGNNCC | 5 cut(s) | 9, 156, 418, 426, 1085 |
| BspPI | GGATC | 1 cut(s) | 647 |
| BspT104I | TTCGAA | 1 cut(s) | 850 |
| BspT107I | GGYRCC | 2 cut(s) | 154, 416 |
| BsrDI | GCAATG | 1 cut(s) | 1128 |
| BsrI | ACTGG | 4 cut(s) | 198, 525, 799, 1074 |
| BssECI | CCNNGG | 1 cut(s) | 420 |
| BssMI | GATC | 3 cut(s) | 639, 814, 943 |
| BssNI | GRCGYC | 1 cut(s) | 512 |
| Bst2UI | CCWGG | 1 cut(s) | 61 |
| Bst4CI | ACNGT | 4 cut(s) | 97, 379, 825, 1168 |
| BstACI | GRCGYC | 1 cut(s) | 512 |
| BstBI | TTCGAA | 1 cut(s) | 850 |
| BstDEI | CTNAG | 6 cut(s) | 34, 587, 612, 760, 987, 1079 |
| BstDSI | CCRYGG | 1 cut(s) | 420 |
| BstEII | GGTNACC | 1 cut(s) | 470 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1059 |
| BstF5I | GGATG | 4 cut(s) | 229, 453, 918, 1207 |
| BstKTI | GATC | 3 cut(s) | 642, 817, 946 |
| BstMAI | GTCTC | 3 cut(s) | 138, 206, 1082 |
| BstMBI | GATC | 3 cut(s) | 639, 814, 943 |
| BstNI | CCWGG | 1 cut(s) | 61 |
| BstPI | GGTNACC | 1 cut(s) | 470 |
| BstSCI | CCNGG | 1 cut(s) | 59 |
| BstSFI | CTRYAG | 1 cut(s) | 1167 |
| BstV1I | GCAGC | 2 cut(s) | 254, 788 |
| BstV2I | GAAGAC | 1 cut(s) | 356 |
| BsuI | GTATCC | 1 cut(s) | 57 |
| BsuRI | GGCC | 1 cut(s) | 746 |
| BtgI | CCRYGG | 1 cut(s) | 420 |
| BtgZI | GCGATG | 1 cut(s) | 786 |
| BtrI | CACGTC | 1 cut(s) | 783 |
| BtsCI | GGATG | 4 cut(s) | 229, 453, 918, 1207 |
| BtsIMutI | CAGTG | 2 cut(s) | 384, 649 |
| Cfr13I | GGNCC | 4 cut(s) | 57, 208, 425, 744 |
| Csp6I | GTAC | 2 cut(s) | 155, 417 |
| CviJI | RGCY | 9 cut(s) | 40, 178, 256, 397, 577, 629, 746, 779, 991 |
| CviKI_1 | RGCY | 9 cut(s) | 40, 178, 256, 397, 577, 629, 746, 779, 991 |
| CviQI | GTAC | 2 cut(s) | 155, 417 |
| DdeI | CTNAG | 6 cut(s) | 34, 587, 612, 760, 987, 1079 |
| DpnI | GATC | 3 cut(s) | 641, 816, 945 |
| DpnII | GATC | 3 cut(s) | 639, 814, 943 |
| Eco47I | GGWCC | 3 cut(s) | 57, 208, 425 |
| Eco57I | CTGAAG | 1 cut(s) | 368 |
| Eco91I | GGTNACC | 1 cut(s) | 470 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1059 |
| EcoO109I | RGGNCCY | 1 cut(s) | 208 |
| EcoO65I | GGTNACC | 1 cut(s) | 470 |
| EcoRI | GAATTC | 1 cut(s) | 124 |
| EcoRII | CCWGG | 1 cut(s) | 59 |
| EcoT22I | ATGCAT | 1 cut(s) | 409 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 648, 680, 930, 962 |
| FauI | CCCGC | 1 cut(s) | 556 |
| FauNDI | CATATG | 2 cut(s) | 597, 740 |
| Fnu4HI | GCNGC | 3 cut(s) | 268, 777, 992 |
| FokI | GGATG | 4 cut(s) | 216, 460, 905, 1194 |
| Fsp4HI | GCNGC | 3 cut(s) | 268, 777, 992 |
| FspBI | CTAG | 3 cut(s) | 278, 711, 1013 |
| GluI | GCNGC | 3 cut(s) | 268, 777, 992 |
| GsuI | CTGGAG | 2 cut(s) | 508, 1092 |
| HaeIII | GGCC | 1 cut(s) | 746 |
| HapII | CCGG | 2 cut(s) | 55, 428 |
| Hin1I | GRCGYC | 1 cut(s) | 512 |
| HincII | GTYRAC | 2 cut(s) | 519, 880 |
| HindII | GTYRAC | 2 cut(s) | 519, 880 |
| HindIII | AAGCTT | 2 cut(s) | 176, 254 |
| HinfI | GANTC | 8 cut(s) | 26, 164, 242, 602, 616, 956, 1031, 1103 |
| HpaI | GTTAAC | 1 cut(s) | 519 |
| HpaII | CCGG | 2 cut(s) | 55, 428 |
| HphI | GGTGA | 2 cut(s) | 35, 445 |
| Hpy166II | GTNNAC | 2 cut(s) | 519, 880 |
| Hpy188I | TCNGA | 5 cut(s) | 25, 503, 787, 961, 1164 |
| Hpy188III | TCNNGA | 7 cut(s) | 112, 121, 400, 542, 706, 1003, 1109 |
| Hpy8I | GTNNAC | 2 cut(s) | 519, 880 |
| Hpy99I | CGWCG | 2 cut(s) | 514, 517 |
| HpyAV | CCTTC | 3 cut(s) | 24, 183, 695 |
| HpyCH4III | ACNGT | 4 cut(s) | 97, 379, 825, 1168 |
| HpyCH4IV | ACGT | 4 cut(s) | 512, 782, 925, 1092 |
| HpyCH4V | TGCA | 7 cut(s) | 275, 338, 407, 699, 776, 1121, 1207 |
| HpyF3I | CTNAG | 6 cut(s) | 34, 587, 612, 760, 987, 1079 |
| HpySE526I | ACGT | 4 cut(s) | 512, 782, 925, 1092 |
| Hsp92I | GRCGYC | 1 cut(s) | 512 |
| KpnI | GGTACC | 2 cut(s) | 158, 420 |
| KspAI | GTTAAC | 1 cut(s) | 519 |
| Kzo9I | GATC | 3 cut(s) | 639, 814, 943 |
| LmnI | GCTCC | 1 cut(s) | 402 |
| Lsp1109I | GCAGC | 2 cut(s) | 254, 788 |
| LweI | GCATC | 2 cut(s) | 205, 763 |
| MaeI | CTAG | 3 cut(s) | 278, 711, 1013 |
| MaeII | ACGT | 4 cut(s) | 512, 782, 925, 1092 |
| MaeIII | GTNAC | 4 cut(s) | 470, 591, 668, 981 |
| MalI | GATC | 3 cut(s) | 641, 816, 945 |
| MboI | GATC | 3 cut(s) | 639, 814, 943 |
| MboII | GAAGA | 7 cut(s) | 194, 361, 394, 400, 745, 854, 1043 |
| MluCI | AATT | 5 cut(s) | 124, 322, 647, 854, 1036 |
| MlyI | GAGTC | 4 cut(s) | 20, 236, 625, 1025 |
| MmeI | TCCRAC | 3 cut(s) | 48, 946, 1008 |
| Mph1103I | ATGCAT | 1 cut(s) | 409 |
| MroXI | GAANNNNTTC | 2 cut(s) | 257, 660 |
| MseI | TTAA | 5 cut(s) | 357, 518, 998, 1047, 1213 |
| MspI | CCGG | 2 cut(s) | 55, 428 |
| MspR9I | CCNGG | 1 cut(s) | 61 |
| Mva1269I | GAATGC | 1 cut(s) | 409 |
| MvaI | CCWGG | 1 cut(s) | 61 |
| NdeI | CATATG | 2 cut(s) | 597, 740 |
| NdeII | GATC | 3 cut(s) | 639, 814, 943 |
| NlaIV | GGNNCC | 5 cut(s) | 9, 156, 418, 426, 1085 |
| NmuCI | GTSAC | 1 cut(s) | 668 |
| NsiI | ATGCAT | 1 cut(s) | 409 |
| NspV | TTCGAA | 1 cut(s) | 850 |
| PctI | GAATGC | 1 cut(s) | 409 |
| PdmI | GAANNNNTTC | 2 cut(s) | 257, 660 |
| PfeI | GAWTC | 4 cut(s) | 164, 602, 956, 1103 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 729 |
| PfoI | TCCNGGA | 1 cut(s) | 59 |
| PkrI | GCNGC | 3 cut(s) | 269, 778, 993 |
| PleI | GAGTC | 4 cut(s) | 20, 236, 624, 1025 |
| PpsI | GAGTC | 4 cut(s) | 20, 236, 624, 1025 |
| PpuMI | RGGWCCY | 1 cut(s) | 208 |
| PshBI | ATTAAT | 1 cut(s) | 1047 |
| Psp5II | RGGWCCY | 1 cut(s) | 208 |
| Psp6I | CCWGG | 1 cut(s) | 59 |
| PspEI | GGTNACC | 1 cut(s) | 470 |
| PspGI | CCWGG | 1 cut(s) | 59 |
| PspN4I | GGNNCC | 5 cut(s) | 9, 156, 418, 426, 1085 |
| PspPI | GGNCC | 4 cut(s) | 57, 208, 425, 744 |
| PspPPI | RGGWCCY | 1 cut(s) | 208 |
| RsaI | GTAC | 2 cut(s) | 156, 418 |
| RsaNI | GTAC | 2 cut(s) | 155, 417 |
| SaqAI | TTAA | 5 cut(s) | 357, 518, 998, 1047, 1213 |
| SatI | GCNGC | 3 cut(s) | 268, 777, 992 |
| Sau3AI | GATC | 3 cut(s) | 639, 814, 943 |
| Sau96I | GGNCC | 4 cut(s) | 57, 208, 425, 744 |
| SchI | GAGTC | 4 cut(s) | 20, 236, 625, 1025 |
| ScrFI | CCNGG | 1 cut(s) | 61 |
| SfaNI | GCATC | 2 cut(s) | 205, 763 |
| SfcI | CTRYAG | 1 cut(s) | 1167 |
| SfuI | TTCGAA | 1 cut(s) | 850 |
| SinI | GGWCC | 3 cut(s) | 57, 208, 425 |
| SmlI | CTYRAG | 1 cut(s) | 203 |
| SmoI | CTYRAG | 1 cut(s) | 203 |
| Sse9I | AATT | 5 cut(s) | 124, 322, 647, 854, 1036 |
| SsiI | CCGC | 2 cut(s) | 549, 992 |
| SspI | AATATT | 1 cut(s) | 284 |
| SspMI | CTAG | 3 cut(s) | 278, 711, 1013 |
| StyD4I | CCNGG | 1 cut(s) | 59 |
| TaaI | ACNGT | 4 cut(s) | 97, 379, 825, 1168 |
| TaiI | ACGT | 4 cut(s) | 515, 785, 928, 1095 |
| TaqI | TCGA | 4 cut(s) | 213, 817, 850, 1004 |
| TasI | AATT | 5 cut(s) | 124, 322, 647, 854, 1036 |
| TauI | GCSGC | 1 cut(s) | 994 |
| TfiI | GAWTC | 4 cut(s) | 164, 602, 956, 1103 |
| Tru1I | TTAA | 5 cut(s) | 357, 518, 998, 1047, 1213 |
| Tru9I | TTAA | 5 cut(s) | 357, 518, 998, 1047, 1213 |
| TscAI | CASTG | 2 cut(s) | 384, 649 |
| TseFI | GTSAC | 1 cut(s) | 668 |
| TseI | GCWGC | 2 cut(s) | 267, 776 |
| Tsp45I | GTSAC | 1 cut(s) | 668 |
| TspDTI | ATGAA | 5 cut(s) | 377, 383, 401, 407, 854 |
| TspGWI | ACGGA | 1 cut(s) | 579 |
| TspRI | CASTG | 2 cut(s) | 384, 649 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 729 |
| VpaK11BI | GGWCC | 3 cut(s) | 57, 208, 425 |
| VspI | ATTAAT | 1 cut(s) | 1047 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1059 |
| XapI | RAATTY | 3 cut(s) | 124, 322, 854 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 427 |
| XmnI | GAANNNNTTC | 2 cut(s) | 257, 660 |
| XspI | CTAG | 3 cut(s) | 278, 711, 1013 |
| ZraI | GACGTC | 1 cut(s) | 513 |
| Zsp2I | ATGCAT | 1 cut(s) | 409 |