MD03G1246000.v1.1

F-box FBD LRR-repeat protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
Physical Location & Seq
Forward (+)
33305724 .. 33307548
1825 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1246000.v1.1.491

Sequence Viewer

Length: 1326 bp
ATGTGTTCAAAGTCGAACTCTCAAGCAAAGGGTAAAGATAGGATTAGTGAATTGCCGGATGCAGTTCTTTGTCACATACTCTCCTTCATTCCAACAAAATATTCCGTGAGGACCAGCATTCTGTCCACAAGATGGAAGAGTATATATGGTTCTGTCCCCAATCTAGACTTCGAATTTGAACAAATGTCTACTACTTGGAAGGAAGAATATATGTCGAACTATGTTGGTTTTTTGATGTTTGTCGATAGGGTACTTTCACTTCGTGACTCGTTGGATATCCAAAAGTTTCGACTTCATTGTTACTGTCGTGCTGAAGATTTCTCTCGTATTGTAGGTTGGATTTGCACTGCCATCAGGCATAATGTTGTTGAACTTGATCTTTGTGTTTATAGTGATAATATAGTTTGTTCGACTTTCGAGTTGCCTCAATGCGTTTTCATGTGCAAAACACTGGTGGTTCTCAAGGTGAAGTCAAATTGTATTACCTATGCTCATCCTACGTCAAGCAGTTTCCCAAGCCTCAAGTTCCTTGATGTCAAAGTTGATTATCCTGAAGACGACTCAGTGGAGAAGCTTTTCGCATGCTGCCCTGTACTTGAAGATTTGTCTATAGATGCAACTATTAGAGATGCATTAATTTTGAGTTTTAATGTCTCTGCGCCTGAACTGAAGAGATTAAGAATGACCTTCTTCAGTGATATGATTGTTGGTAAAGATTTTTTGTACGACATTTCTATTAACGCCCCAAAGCTTGAAAACCTTGACATCAAGCAGGATGATTTGTCTGTTTATTTGTTTGAGAATGTAAACTCCCTCGTCAAAGGCAGTGTTTCAGAAAGAGCAACTGTGCTTCTGGAGGCATTTTCCAATGTTAAATGTCTGTCTATTTCCGCTCATTTTGTGGAGGGTTGTCTGCCTGCTTTCGATCATTTGACCGAATTGAAGTTGGTTCTTTATGATTGCTATCACTGGGATCTGCTAACAGAGTTGCTCAAGAAATCACCTAATTTGGAATCTCTTGTCATCGAACATAAAAAAGACGAGGAATGTGTTAAGAATTACGACGAGACTGAAAGTTATTCGAAAGATGTCTTATACTCGGAGAATCGATGGAGTACACCGGAGTCTGTACCTATTTGTCTGATATCACACCTCAAAACCATCACTGTAAGGGGATTCGAGGGATACCCGCATGTGAAGAAAGTGGCCAAGTATTTGTTAAACAACGGTAAAGTTTTGACTAAGATGACTGTCTATAACGATGGGTTATACAAAGAACTAATGCTTGAGAGGGGTTCTAGGAGTTGTTGGGTTGAACTTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

442

Amino Acids

50.58

Weight (kDa)

5.59

Isoelectric Point (pI)

42.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 15 - 48 4.9e-07 F-box domain
LRR_At5g56370 PF24758 112 - 256 7.1e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 374 - 417 1.8e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 132
AccBSI CCGCTC 1 cut(s) 893
AccI GTMKAC 1 cut(s) 188
AciI CCGC 2 cut(s) 891, 1190
AclWI GGATC 1 cut(s) 981
AcoI YGGCCR 1 cut(s) 1206
AcsI RAATTY 1 cut(s) 173
AcuI CTGAAG 4 cut(s) 333, 573, 676, 689
AdeI CACNNNGTG 1 cut(s) 263
AfaI GTAC 5 cut(s) 252, 594, 725, 1117, 1131
AfiI CCNNNNNNNGG 1 cut(s) 132
AgsI TTSAA 7 cut(s) 9, 179, 371, 599, 755, 943, 1316
AjuI GAANNNNNNNTTGG 4 cut(s) 85, 117, 152, 184
AluBI AGCT 2 cut(s) 574, 751
AluI AGCT 2 cut(s) 574, 751
Alw26I GTCTC 2 cut(s) 658, 1061
AlwI GGATC 1 cut(s) 981
AoxI GGCC 1 cut(s) 1206
ApeKI GCWGC 1 cut(s) 585
ApoI RAATTY 1 cut(s) 173
ArsI GACNNNNNNTTYG 2 cut(s) 158, 190
AseI ATTAAT 1 cut(s) 635
Asp700I GAANNNNTTC 1 cut(s) 575
AspLEI GCGC 1 cut(s) 661
AspS9I GGNCC 1 cut(s) 111
AsuHPI GGTGA 2 cut(s) 478, 993
AsuII TTCGAA 2 cut(s) 171, 1082
AvaII GGWCC 1 cut(s) 111
BalI TGGCCA 1 cut(s) 1208
BarI GAAGNNNNNNTAC 2 cut(s) 243, 275
BbsI GAAGAC 1 cut(s) 561
BbvI GCAGC 1 cut(s) 572
BccI CCATC 5 cut(s) 126, 359, 1104, 1169, 1256
BciVI GTATCC 1 cut(s) 1178
BcoDI GTCTC 2 cut(s) 658, 1061
BfaI CTAG 2 cut(s) 164, 1299
BfmI CTRYAG 1 cut(s) 609
BfuI GTATCC 1 cut(s) 1178
BisI GCNGC 1 cut(s) 586
BlsI GCNGC 1 cut(s) 587
Bme18I GGWCC 1 cut(s) 111
BmgT120I GGNCC 1 cut(s) 111
BmrI ACTGGG 1 cut(s) 979
BmsI GCATC 3 cut(s) 49, 604, 619
BmuI ACTGGG 1 cut(s) 979
BpiI GAAGAC 1 cut(s) 561
BpmI CTGGAG 1 cut(s) 875
Bpu14I TTCGAA 2 cut(s) 171, 1082
BpuEI CTTGAG 5 cut(s) 6, 446, 506, 977, 1307
Bsa29I ATCGAT 1 cut(s) 1108
BsaBI GATNNNNATC 1 cut(s) 963
BsaWI WCCGGW 1 cut(s) 1120
BsaXI ACNNNNNCTCC 2 cut(s) 65, 95
Bsc4I CCNNNNNNNGG 1 cut(s) 132
Bse1I ACTGG 2 cut(s) 456, 974
Bse8I GATNNNNATC 1 cut(s) 963
BseCI ATCGAT 1 cut(s) 1108
BseGI GGATG 3 cut(s) 64, 493, 781
BseJI GATNNNNATC 1 cut(s) 963
BseLI CCNNNNNNNGG 1 cut(s) 132
BseMII CTCAG 1 cut(s) 576
BseNI ACTGG 2 cut(s) 456, 974
BseXI GCAGC 1 cut(s) 572
BshFI GGCC 1 cut(s) 1208
BshVI ATCGAT 1 cut(s) 1108
BsiSI CCGG 2 cut(s) 56, 1121
BslFI GGGAC 1 cut(s) 140
BslI CCNNNNNNNGG 1 cut(s) 132
BsmAI GTCTC 2 cut(s) 658, 1061
BsmFI GGGAC 1 cut(s) 140
BsmI GAATGC 1 cut(s) 117
BsnI GGCC 1 cut(s) 1208
Bsp119I TTCGAA 2 cut(s) 171, 1082
Bsp143I GATC 3 cut(s) 376, 925, 973
BspACI CCGC 2 cut(s) 891, 1190
BspANI GGCC 1 cut(s) 1208
BspCNI CTCAG 1 cut(s) 575
BspDI ATCGAT 1 cut(s) 1108
BspPI GGATC 1 cut(s) 981
BspT104I TTCGAA 2 cut(s) 171, 1082
BsrBI CCGCTC 1 cut(s) 893
BsrI ACTGG 2 cut(s) 456, 974
BssMI GATC 3 cut(s) 376, 925, 973
Bst4CI ACNGT 5 cut(s) 305, 847, 1168, 1229, 1252
Bst6I CTCTTC 2 cut(s) 131, 665
BstBI TTCGAA 2 cut(s) 171, 1082
BstC8I GCNNGC 2 cut(s) 583, 918
BstDEI CTNAG 2 cut(s) 562, 1242
BstF5I GGATG 3 cut(s) 64, 493, 781
BstHHI GCGC 1 cut(s) 661
BstKTI GATC 3 cut(s) 379, 928, 976
BstMAI GTCTC 2 cut(s) 658, 1061
BstMBI GATC 3 cut(s) 376, 925, 973
BstNSI RCATGY 2 cut(s) 585, 1196
BstSFI CTRYAG 1 cut(s) 609
BstV1I GCAGC 1 cut(s) 572
BstV2I GAAGAC 1 cut(s) 561
BstX2I RGATCY 1 cut(s) 973
BstYI RGATCY 1 cut(s) 973
Bsu15I ATCGAT 1 cut(s) 1108
BsuI GTATCC 1 cut(s) 1178
BsuRI GGCC 1 cut(s) 1208
BsuTUI ATCGAT 1 cut(s) 1108
BtsCI GGATG 3 cut(s) 64, 493, 781
BtsI GCAGTG 2 cut(s) 345, 832
BtsIMutI CAGTG 7 cut(s) 345, 449, 570, 700, 832, 967, 1164
Cac8I GCNNGC 2 cut(s) 583, 918
CfoI GCGC 1 cut(s) 661
Cfr13I GGNCC 1 cut(s) 111
ClaI ATCGAT 1 cut(s) 1108
Csp6I GTAC 5 cut(s) 251, 593, 724, 1116, 1130
CviAII CATG 3 cut(s) 439, 582, 1193
CviJI RGCY 4 cut(s) 519, 574, 751, 1208
CviKI_1 RGCY 4 cut(s) 519, 574, 751, 1208
CviQI GTAC 5 cut(s) 251, 593, 724, 1116, 1130
DdeI CTNAG 2 cut(s) 562, 1242
DpnI GATC 3 cut(s) 378, 927, 975
DpnII GATC 3 cut(s) 376, 925, 973
DraIII CACNNNGTG 1 cut(s) 263
EaeI YGGCCR 1 cut(s) 1206
Eam1104I CTCTTC 2 cut(s) 131, 665
EarI CTCTTC 2 cut(s) 131, 665
Eco32I GATATC 2 cut(s) 277, 1146
Eco47I GGWCC 1 cut(s) 111
Eco57I CTGAAG 4 cut(s) 333, 573, 676, 689
EcoRV GATATC 2 cut(s) 277, 1146
EcoT22I ATGCAT 1 cut(s) 634
FaeI CATG 3 cut(s) 442, 585, 1196
FaqI GGGAC 1 cut(s) 140
FatI CATG 3 cut(s) 438, 581, 1192
FauI CCCGC 1 cut(s) 1197
FblI GTMKAC 1 cut(s) 188
Fnu4HI GCNGC 1 cut(s) 586
FokI GGATG 3 cut(s) 71, 480, 788
Fsp4HI GCNGC 1 cut(s) 586
FspBI CTAG 2 cut(s) 164, 1299
GlaI GCGC 1 cut(s) 660
GluI GCNGC 1 cut(s) 586
GsuI CTGGAG 1 cut(s) 875
HaeIII GGCC 1 cut(s) 1208
HapII CCGG 2 cut(s) 56, 1121
HhaI GCGC 1 cut(s) 661
Hin1II CATG 3 cut(s) 442, 585, 1196
Hin6I GCGC 1 cut(s) 659
HinP1I GCGC 1 cut(s) 659
HindIII AAGCTT 2 cut(s) 572, 749
HinfI GANTC 6 cut(s) 266, 560, 1013, 1105, 1124, 1176
HpaII CCGG 2 cut(s) 56, 1121
HphI GGTGA 2 cut(s) 478, 993
Hpy166II GTNNAC 4 cut(s) 126, 189, 808, 1118
Hpy188I TCNGA 3 cut(s) 835, 1102, 1143
Hpy188III TCNNGA 5 cut(s) 164, 263, 551, 854, 994
Hpy8I GTNNAC 4 cut(s) 126, 189, 808, 1118
Hpy99I CGWCG 1 cut(s) 1067
HpyAV CCTTC 3 cut(s) 94, 193, 697
HpyCH4III ACNGT 5 cut(s) 305, 847, 1168, 1229, 1252
HpyCH4IV ACGT 1 cut(s) 500
HpyCH4V TGCA 5 cut(s) 62, 345, 444, 617, 632
HpyF3I CTNAG 2 cut(s) 562, 1242
HpySE526I ACGT 1 cut(s) 500
Hsp92II CATG 3 cut(s) 442, 585, 1196
HspAI GCGC 1 cut(s) 659
Kzo9I GATC 3 cut(s) 376, 925, 973
Lsp1109I GCAGC 1 cut(s) 572
LweI GCATC 3 cut(s) 49, 604, 619
MaeI CTAG 2 cut(s) 164, 1299
MaeII ACGT 1 cut(s) 500
MaeIII GTNAC 3 cut(s) 71, 263, 299
MalI GATC 3 cut(s) 378, 927, 975
MbiI CCGCTC 1 cut(s) 893
MboI GATC 3 cut(s) 376, 925, 973
MboII GAAGA 8 cut(s) 148, 215, 326, 566, 611, 682, 682, 1210
MflI RGATCY 1 cut(s) 973
MlsI TGGCCA 1 cut(s) 1208
MluCI AATT 7 cut(s) 50, 173, 475, 636, 938, 1006, 1057
MluNI TGGCCA 1 cut(s) 1208
MlyI GAGTC 3 cut(s) 260, 554, 1133
MmeI TCCRAC 3 cut(s) 116, 252, 317
Mox20I TGGCCA 1 cut(s) 1208
Mph1103I ATGCAT 1 cut(s) 634
MroXI GAANNNNTTC 1 cut(s) 575
MscI TGGCCA 1 cut(s) 1208
MseI TTAA 7 cut(s) 635, 648, 677, 738, 873, 1053, 1220
Msp20I TGGCCA 1 cut(s) 1208
MspI CCGG 2 cut(s) 56, 1121
Mva1269I GAATGC 1 cut(s) 117
NdeII GATC 3 cut(s) 376, 925, 973
NlaIII CATG 3 cut(s) 442, 585, 1196
NmuCI GTSAC 2 cut(s) 71, 263
NsiI ATGCAT 1 cut(s) 634
NspI RCATGY 2 cut(s) 585, 1196
NspV TTCGAA 2 cut(s) 171, 1082
PaeI GCATGC 1 cut(s) 585
PctI GAATGC 1 cut(s) 117
PdmI GAANNNNTTC 1 cut(s) 575
PfeI GAWTC 3 cut(s) 1013, 1105, 1176
PflMI CCANNNNNTGG 1 cut(s) 132
PkrI GCNGC 1 cut(s) 587
PleI GAGTC 3 cut(s) 260, 554, 1132
PpsI GAGTC 3 cut(s) 260, 554, 1132
PshBI ATTAAT 1 cut(s) 635
PspPI GGNCC 1 cut(s) 111
PsrI GAACNNNNNNTAC 2 cut(s) 133, 165
PsuI RGATCY 1 cut(s) 973
RsaI GTAC 5 cut(s) 252, 594, 725, 1117, 1131
RsaNI GTAC 5 cut(s) 251, 593, 724, 1116, 1130
SaqAI TTAA 7 cut(s) 635, 648, 677, 738, 873, 1053, 1220
SatI GCNGC 1 cut(s) 586
Sau3AI GATC 3 cut(s) 376, 925, 973
Sau96I GGNCC 1 cut(s) 111
SchI GAGTC 3 cut(s) 260, 554, 1133
SfaNI GCATC 3 cut(s) 49, 604, 619
SfcI CTRYAG 1 cut(s) 609
SfuI TTCGAA 2 cut(s) 171, 1082
SinI GGWCC 1 cut(s) 111
SmlI CTYRAG 5 cut(s) 21, 461, 521, 992, 1286
SmoI CTYRAG 5 cut(s) 21, 461, 521, 992, 1286
SphI GCATGC 1 cut(s) 585
Sse9I AATT 7 cut(s) 50, 173, 475, 636, 938, 1006, 1057
SsiI CCGC 2 cut(s) 891, 1190
SspI AATATT 1 cut(s) 101
SspMI CTAG 2 cut(s) 164, 1299
TaaI ACNGT 5 cut(s) 305, 847, 1168, 1229, 1252
TaiI ACGT 1 cut(s) 503
TaqII GACCGA 1 cut(s) 950
TasI AATT 7 cut(s) 50, 173, 475, 636, 938, 1006, 1057
TatI WGTACW 2 cut(s) 592, 1115
TfiI GAWTC 3 cut(s) 1013, 1105, 1176
Tru1I TTAA 7 cut(s) 635, 648, 677, 738, 873, 1053, 1220
Tru9I TTAA 7 cut(s) 635, 648, 677, 738, 873, 1053, 1220
TscAI CASTG 7 cut(s) 352, 456, 570, 700, 832, 974, 1171
TseFI GTSAC 2 cut(s) 71, 263
TseI GCWGC 1 cut(s) 585
Tsp45I GTSAC 2 cut(s) 71, 263
TspDTI ATGAA 3 cut(s) 76, 284, 427
TspGWI ACGGA 1 cut(s) 94
TspRI CASTG 7 cut(s) 352, 456, 570, 700, 832, 974, 1171
Van91I CCANNNNNTGG 1 cut(s) 132
VpaK11BI GGWCC 1 cut(s) 111
VspI ATTAAT 1 cut(s) 635
XapI RAATTY 1 cut(s) 173
XbaI TCTAGA 1 cut(s) 163
XceI RCATGY 2 cut(s) 585, 1196
XmiI GTMKAC 1 cut(s) 188
XmnI GAANNNNTTC 1 cut(s) 575
XspI CTAG 2 cut(s) 164, 1299
Zsp2I ATGCAT 1 cut(s) 634
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.