pycom11g24250

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0000062
Physical Location & Seq
Reverse (-)
27220830 .. 27222549
1720 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g24250.1

Sequence Viewer

Length: 1533 bp
ATGGGTTCAATGCCAAAGCCTCAAGAGAGAGTCAGTGATAGGATAAGTGCACTACGAAATGAGGTTCTTTGCCACATACTTTCATTTCTTCCAACGAAGTATGTTGTTAGGACCACCGTTTTGTCTAAGAAATGGAACAACATATGGACTTGCGTTCCTAATCTGTACTTTTGTGACGATGACTACCCTAATGTTAATGCGTTTATATCATTTGTGGATCATGTACTTGACTCTCCTGACTTATCACGCATCCAAAAGTTCCGTCTTCGATGTGACCATGACTACTTCGAACCCCCACCCATTGATCATTGGATTCACAGTGCAATTAGACGGAAGGTTGTTGAACTTGATCTTTGTGTTTCTCACTTTGATCCAGACGACAATTTGGAATTGCCTCAAACAAATTTCATGTGCGAAACACTGGAAGTTTTGAAGCTGCAGTTTCATTTTATTGCTCATTCTCTTACATCAAAGTGTTTTCCAAATCTCAAGTTCCTCTATGTTCTAATTCATCATCCTGATATTGAATCAGTGAAAAATGTTTTATCTTACCTTCCTGTACTGGAAGGTTTGAGAATTGGGGGATCTCTTGACGATTATGATGTTGAAAGTCTGGATATCAACATCTCTGCACCATCACTGAAGACGTTAGCTATATGTTTGGAGTTTGACGATTTTGATGAGGAGTTCAAGATTTGTATTGACGCTCCAAAACTTGAATCCCTTGATGTCCAGCTACTTACTAGTTTGTTAAATTTTTCTTTGTTGATCAAGGAAAATCTCATAGTCAAGGCCAATGTGGATCTCTCATACACAGAAATGCCTAATAGTAATATTGCAGACGTGGAAGATATTCTCTTCTATGCAGAAGAGCCTGATCGCGCAATAGCACTTCTGAGAAATGTTTCCAATGTCAAGTACCTGTCTCTTTCAGCTCATAGTTTGGAAGGTGATTTGCCTGCATTTGACAATTTGAACCAACTGAAGCTGGTTTTTTACGATTGCGGTTACTGGAGATTTCTGACAAATTTACTCGAGAGATCACCTAATCTAGAATATCTCGTCTTTGAACACAAAGATTGTACCATATGCAATGTAGAAGACTTCAGGCATGAATTTATTCCACCAGAAGTTGTGCCTATTTCTTTGTCGTCGCAGCTCAAGATTATTACTGTAAACAGATTCAAGGGAACGCGTGGTGAGATGGAATTGGTAAAGTACTTGTTAAAGAATGGTGGAGTACTAAATAAGATGACCATTGACGCTTCAGGGAATACAAATCTTCCGCATGCACGTACGAAGGTGTTATCAAAGGAAGTTTCACTGTTTCAAAGGGGTTCAAAGACCTGTCAAGTTGAAATTCGATTTGGGATTTCACAATGGCATCATTTTCAGGCGCATTTCAATAGTTTGGAAGGAACATTGTTCCAAAGGCATTACTGGATCGTGCACACAGTTGTTCCTCAAGAGATCACCTTTTTTGGACGTTGCCTCAAAGATTTACAAACAATTGAAGTAATCAGTACCGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

511

Amino Acids

58.81

Weight (kDa)

5.4

Isoelectric Point (pI)

39.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 51 1.2e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 86 - 426 2.4e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 101 - 243 1.7e-12 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 376 - 420 1.8e-12 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 882, 1195
AciI CCGC 2 cut(s) 1005, 1286
AclWI GGATC 5 cut(s) 225, 365, 592, 810, 1451
AcsI RAATTY 5 cut(s) 403, 754, 1027, 1115, 1359
AcuI CTGAAG 4 cut(s) 662, 1004, 1090, 1251
AfaI GTAC 9 cut(s) 167, 225, 561, 920, 1084, 1220, 1242, 1297, 1525
AflIII ACRYGT 1 cut(s) 1193
AhlI ACTAGT 1 cut(s) 743
AjiI CACGTC 1 cut(s) 844
AjuI GAANNNNNNNTTGG 2 cut(s) 1350, 1382
AluBI AGCT 6 cut(s) 436, 653, 736, 935, 988, 1159
AluI AGCT 6 cut(s) 436, 653, 736, 935, 988, 1159
Alw21I GWGCWC 2 cut(s) 52, 1452
Alw26I GTCTC 1 cut(s) 930
Alw44I GTGCAC 2 cut(s) 48, 1448
AlwI GGATC 5 cut(s) 225, 365, 592, 810, 1451
Ama87I CYCGRG 1 cut(s) 1034
AoxI GGCC 1 cut(s) 792
ApaLI GTGCAC 2 cut(s) 48, 1448
ApeKI GCWGC 2 cut(s) 436, 1156
ApoI RAATTY 5 cut(s) 403, 754, 1027, 1115, 1359
ArsI GACNNNNNNTTYG 4 cut(s) 103, 135, 247, 279
Asp700I GAANNNNTTC 3 cut(s) 852, 904, 1119
AspLEI GCGC 2 cut(s) 884, 1399
AspS9I GGNCC 1 cut(s) 111
AsuHPI GGTGA 4 cut(s) 962, 1035, 1211, 1465
AsuII TTCGAA 1 cut(s) 288
AvaI CYCGRG 1 cut(s) 1034
AvaII GGWCC 1 cut(s) 111
BaeGI GKGCMC 2 cut(s) 52, 1452
BbsI GAAGAC 3 cut(s) 257, 650, 1107
Bbv12I GWGCWC 2 cut(s) 52, 1452
BbvI GCAGC 2 cut(s) 423, 1168
BccI CCATC 2 cut(s) 643, 1198
BclI TGATCA 2 cut(s) 304, 768
BcoDI GTCTC 1 cut(s) 930
BcuI ACTAGT 1 cut(s) 743
BfaI CTAG 2 cut(s) 744, 1052
BfmI CTRYAG 1 cut(s) 437
BisI GCNGC 2 cut(s) 437, 1157
BlsI GCNGC 2 cut(s) 438, 1158
BmcAI AGTACT 2 cut(s) 1220, 1242
Bme18I GGWCC 1 cut(s) 111
BmeT110I CYCGRG 1 cut(s) 1034
BmgBI CACGTC 1 cut(s) 844
BmgT120I GGNCC 1 cut(s) 111
BmsI GCATC 2 cut(s) 258, 1393
BpiI GAAGAC 3 cut(s) 257, 650, 1107
BpmI CTGGAG 1 cut(s) 1033
Bpu14I TTCGAA 1 cut(s) 288
BpuEI CTTGAG 4 cut(s) 6, 473, 1145, 1449
BsaAI YACGTR 1 cut(s) 1295
Bse1I ACTGG 4 cut(s) 426, 567, 1016, 1445
Bse3DI GCAATG 1 cut(s) 1099
BseGI GGATG 2 cut(s) 249, 514
BseMI GCAATG 1 cut(s) 1099
BseMII CTCAG 1 cut(s) 887
BseNI ACTGG 4 cut(s) 426, 567, 1016, 1445
BseRI GAGGAG 1 cut(s) 698
BseSI GKGCMC 2 cut(s) 52, 1452
BseXI GCAGC 2 cut(s) 423, 1168
BsgI GTGCAG 1 cut(s) 615
Bsh1236I CGCG 2 cut(s) 882, 1195
BshFI GGCC 1 cut(s) 794
BsiHKAI GWGCWC 2 cut(s) 52, 1452
BsiHKCI CYCGRG 1 cut(s) 1034
BsiWI CGTACG 1 cut(s) 1295
BsmAI GTCTC 1 cut(s) 930
BsnI GGCC 1 cut(s) 794
BsoBI CYCGRG 1 cut(s) 1034
Bsp119I TTCGAA 1 cut(s) 288
Bsp1286I GDGCHC 2 cut(s) 52, 1452
BspACI CCGC 2 cut(s) 1005, 1286
BspANI GGCC 1 cut(s) 794
BspCNI CTCAG 1 cut(s) 888
BspFNI CGCG 2 cut(s) 882, 1195
BspMAI CTGCAG 1 cut(s) 441
BspPI GGATC 5 cut(s) 225, 365, 592, 810, 1451
BspQI GCTCTTC 1 cut(s) 864
BspT104I TTCGAA 1 cut(s) 288
BsrDI GCAATG 1 cut(s) 1099
BsrI ACTGG 4 cut(s) 426, 567, 1016, 1445
Bst4CI ACNGT 5 cut(s) 118, 320, 1174, 1326, 1456
Bst6I CTCTTC 2 cut(s) 863, 864
BstBAI YACGTR 1 cut(s) 1295
BstBI TTCGAA 1 cut(s) 288
BstC8I GCNNGC 2 cut(s) 960, 1290
BstDEI CTNAG 2 cut(s) 126, 896
BstF5I GGATG 2 cut(s) 249, 514
BstFNI CGCG 2 cut(s) 882, 1195
BstHHI GCGC 2 cut(s) 884, 1399
BstMAI GTCTC 1 cut(s) 930
BstNSI RCATGY 1 cut(s) 1292
BstSFI CTRYAG 1 cut(s) 437
BstSLI GKGCMC 2 cut(s) 52, 1452
BstUI CGCG 2 cut(s) 882, 1195
BstV1I GCAGC 2 cut(s) 423, 1168
BstV2I GAAGAC 3 cut(s) 257, 650, 1107
BstX2I RGATCY 2 cut(s) 584, 802
BstYI RGATCY 2 cut(s) 584, 802
BsuRI GGCC 1 cut(s) 794
BtrI CACGTC 1 cut(s) 844
BtsCI GGATG 2 cut(s) 249, 514
BtsIMutI CAGTG 6 cut(s) 40, 325, 419, 537, 638, 1322
Cac8I GCNNGC 2 cut(s) 960, 1290
CfoI GCGC 2 cut(s) 884, 1399
Cfr13I GGNCC 1 cut(s) 111
CseI GACGC 2 cut(s) 713, 1271
Csp6I GTAC 9 cut(s) 166, 224, 560, 919, 1083, 1219, 1241, 1296, 1524
CviAII CATG 5 cut(s) 221, 278, 409, 1112, 1289
CviJI RGCY 9 cut(s) 19, 436, 653, 736, 794, 874, 935, 988, 1159
CviKI_1 RGCY 9 cut(s) 19, 436, 653, 736, 794, 874, 935, 988, 1159
CviQI GTAC 9 cut(s) 166, 224, 560, 919, 1083, 1219, 1241, 1296, 1524
DdeI CTNAG 2 cut(s) 126, 896
Eam1104I CTCTTC 2 cut(s) 863, 864
EarI CTCTTC 2 cut(s) 863, 864
Eco32I GATATC 1 cut(s) 619
Eco47I GGWCC 1 cut(s) 111
Eco57I CTGAAG 4 cut(s) 662, 1004, 1090, 1251
Eco88I CYCGRG 1 cut(s) 1034
EcoRV GATATC 1 cut(s) 619
FaeI CATG 5 cut(s) 224, 281, 412, 1115, 1292
FatI CATG 5 cut(s) 220, 277, 408, 1111, 1288
FauNDI CATATG 2 cut(s) 143, 1088
FbaI TGATCA 2 cut(s) 304, 768
Fnu4HI GCNGC 2 cut(s) 437, 1157
FokI GGATG 2 cut(s) 236, 501
Fsp4HI GCNGC 2 cut(s) 437, 1157
FspBI CTAG 2 cut(s) 744, 1052
GlaI GCGC 2 cut(s) 883, 1398
GluI GCNGC 2 cut(s) 437, 1157
GsuI CTGGAG 1 cut(s) 1033
HaeIII GGCC 1 cut(s) 794
HgaI GACGC 2 cut(s) 713, 1271
HhaI GCGC 2 cut(s) 884, 1399
Hin1II CATG 5 cut(s) 224, 281, 412, 1115, 1292
Hin6I GCGC 2 cut(s) 882, 1397
HinP1I GCGC 2 cut(s) 882, 1397
HinfI GANTC 6 cut(s) 30, 230, 313, 527, 719, 1182
HphI GGTGA 4 cut(s) 962, 1035, 1211, 1465
Hpy166II GTNNAC 3 cut(s) 50, 1177, 1450
Hpy188I TCNGA 2 cut(s) 897, 1023
Hpy8I GTNNAC 3 cut(s) 50, 1177, 1450
Hpy99I CGWCG 1 cut(s) 1156
HpyAV CCTTC 6 cut(s) 328, 560, 563, 941, 1294, 1409
HpyCH4III ACNGT 5 cut(s) 118, 320, 1174, 1326, 1456
HpyCH4IV ACGT 4 cut(s) 647, 843, 1294, 1486
HpyF3I CTNAG 2 cut(s) 126, 896
HpySE526I ACGT 4 cut(s) 647, 843, 1294, 1486
Hsp92II CATG 5 cut(s) 224, 281, 412, 1115, 1292
HspAI GCGC 2 cut(s) 882, 1397
Ksp22I TGATCA 2 cut(s) 304, 768
LguI GCTCTTC 1 cut(s) 864
LmnI GCTCC 1 cut(s) 712
Lsp1109I GCAGC 2 cut(s) 423, 1168
LweI GCATC 2 cut(s) 258, 1393
MaeI CTAG 2 cut(s) 744, 1052
MaeII ACGT 4 cut(s) 647, 843, 1294, 1486
MaeIII GTNAC 3 cut(s) 173, 272, 1007
MboII GAAGA 8 cut(s) 80, 257, 655, 850, 860, 881, 1112, 1274
MfeI CAATTG 1 cut(s) 1509
MflI RGATCY 2 cut(s) 584, 802
MhlI GDGCHC 2 cut(s) 52, 1452
MluI ACGCGT 1 cut(s) 1193
MlyI GAGTC 2 cut(s) 39, 224
MmeI TCCRAC 1 cut(s) 116
MnlI CCTC 7 cut(s) 30, 55, 405, 506, 676, 1473, 1502
MroXI GAANNNNTTC 3 cut(s) 852, 904, 1119
MseI TTAA 3 cut(s) 195, 752, 1226
MslI CAYNNNNRTG 2 cut(s) 472, 818
MunI CAATTG 1 cut(s) 1509
MvnI CGCG 2 cut(s) 882, 1195
NdeI CATATG 2 cut(s) 143, 1088
NlaIII CATG 5 cut(s) 224, 281, 412, 1115, 1292
NmuCI GTSAC 2 cut(s) 173, 272
NspI RCATGY 1 cut(s) 1292
NspV TTCGAA 1 cut(s) 288
PaeI GCATGC 1 cut(s) 1292
PaeR7I CTCGAG 1 cut(s) 1034
PciSI GCTCTTC 1 cut(s) 864
PdmI GAANNNNTTC 3 cut(s) 852, 904, 1119
PfeI GAWTC 4 cut(s) 313, 527, 719, 1182
Pfl23II CGTACG 1 cut(s) 1295
PkrI GCNGC 2 cut(s) 438, 1158
PleI GAGTC 2 cut(s) 38, 224
PpsI GAGTC 2 cut(s) 38, 224
Ppu21I YACGTR 1 cut(s) 1295
PspLI CGTACG 1 cut(s) 1295
PspPI GGNCC 1 cut(s) 111
PstI CTGCAG 1 cut(s) 441
PsuI RGATCY 2 cut(s) 584, 802
RsaI GTAC 9 cut(s) 167, 225, 561, 920, 1084, 1220, 1242, 1297, 1525
RsaNI GTAC 9 cut(s) 166, 224, 560, 919, 1083, 1219, 1241, 1296, 1524
RseI CAYNNNNRTG 2 cut(s) 472, 818
SapI GCTCTTC 1 cut(s) 864
SaqAI TTAA 3 cut(s) 195, 752, 1226
SatI GCNGC 2 cut(s) 437, 1157
Sau96I GGNCC 1 cut(s) 111
ScaI AGTACT 2 cut(s) 1220, 1242
SchI GAGTC 2 cut(s) 39, 224
SduI GDGCHC 2 cut(s) 52, 1452
SfaNI GCATC 2 cut(s) 258, 1393
SfcI CTRYAG 1 cut(s) 437
Sfr274I CTCGAG 1 cut(s) 1034
SfuI TTCGAA 1 cut(s) 288
SinI GGWCC 1 cut(s) 111
SlaI CTCGAG 1 cut(s) 1034
SmiMI CAYNNNNRTG 2 cut(s) 472, 818
SmlI CTYRAG 5 cut(s) 21, 488, 1034, 1160, 1464
SmoI CTYRAG 5 cut(s) 21, 488, 1034, 1160, 1464
SpeI ACTAGT 1 cut(s) 743
SphI GCATGC 1 cut(s) 1292
SsiI CCGC 2 cut(s) 1005, 1286
SspI AATATT 1 cut(s) 835
SspMI CTAG 2 cut(s) 744, 1052
TaaI ACNGT 5 cut(s) 118, 320, 1174, 1326, 1456
TaiI ACGT 4 cut(s) 650, 846, 1297, 1489
TaqI TCGA 4 cut(s) 268, 288, 1035, 1363
TatI WGTACW 5 cut(s) 165, 223, 559, 1218, 1240
TfiI GAWTC 4 cut(s) 313, 527, 719, 1182
Tru1I TTAA 3 cut(s) 195, 752, 1226
Tru9I TTAA 3 cut(s) 195, 752, 1226
TscAI CASTG 6 cut(s) 40, 325, 426, 537, 645, 1329
TseFI GTSAC 2 cut(s) 173, 272
TseI GCWGC 2 cut(s) 436, 1156
Tsp45I GTSAC 2 cut(s) 173, 272
TspDTI ATGAA 5 cut(s) 72, 397, 434, 500, 1128
TspGWI ACGGA 2 cut(s) 251, 346
TspRI CASTG 6 cut(s) 40, 325, 426, 537, 645, 1329
VneI GTGCAC 2 cut(s) 48, 1448
VpaK11BI GGWCC 1 cut(s) 111
XapI RAATTY 5 cut(s) 403, 754, 1027, 1115, 1359
XbaI TCTAGA 1 cut(s) 1051
XceI RCATGY 1 cut(s) 1292
XhoI CTCGAG 1 cut(s) 1034
XmnI GAANNNNTTC 3 cut(s) 852, 904, 1119
XspI CTAG 2 cut(s) 744, 1052
ZrmI AGTACT 2 cut(s) 1220, 1242
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.