Rorug05G0109300

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000062
Physical Location & Seq
Forward (+)
9732782 .. 9735955
3174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0109300.1

Sequence Viewer

Length: 1269 bp
ATGCCATCCACCCTCCTCTCAGATCTACCCACCAAACCCATCTCAGCCTCCTCTCTCCCAGACCCATCTTTCTCTTTTTTCCAATCCAAACCCATGTCGTCTCTCCGCGTCTACCCAGATCTGACCTCCCGGGTCTACCCGGAACCCGACCACCGCCGCATCGACCACTTCGACCGCCTCCCGGACTCCCTCCTCCTCCTCGTCTTCAACAAGATCGGCGACGTCAAGGCCCTCGGCCGATGCTGCGTCGTTTCGCGCCGCTTCCACTCCCTCGTCCCGCAGGTCGAAAACGTCGTCGTTCGGGTCGACTGCGTCATCTCCGACGACGATTCCTCGCCCTCCGCCTCCGCCTCCGACAAGTCACGCGCCCCCTTCTCGAGTCTCTTCCGGTTGGTCTTCGGCGGCATTGTCAAGCCTCTCCAGGCTCTCGGCCAGTTCCTCGGTCCCCGCCGATCGTCGTCCTCCTCCTCGTCGGCGTCGTCGCTCGCCGTCGGGAACGAAGACGACGGCGGCGAGCTCGAGCAGGCCGGCGTCACGCACCACTCCCCCACTCAGGTGCTCAAGAATTTCAACGAGATTCGGTTCCTCCGGATCGAGCTTCCCTCCGGCGAGCTGGGCATAGACGACGGCGTTTTGCTCAAATGGAGGGCCGATTTCGGGTCTACTTTGGACAACTGTGTGATTCTTGGAGCTTCCTCTGTGATTCAACCCGGACCCAACAAGCCCAACGACGTCGTCTCCGGCTCGGGCGATGGGGTTTGCCCCGCTAACGCCGTCACCGACGATAACGGAAGCATACCCGACTCGTTTTACACAAACGGTGGACTGAAGTTGAGGGTGGTGTGGACCATTAGCTCATTGATAGCAGCCTCTGCCCGGCATTACTTGCTTCAGCCAATCATTTCGGAGCACAAGACACTAGACAGCCTGGTGCTGACCGATGCCGACGGGCAGGGGGTGTTGTACATGAACAGAGAGCAGCTTGAGGAGTTGAGGGTGAAGCCATTGTCGGCTTCTTCGGCCTCCAAGAGGACGCTGGTGCCGGCCCTCAATATGAGGCTCTGGTACGCGCCCCAGTTGGAGTTGCCGGATGGGGTTGTGCTTAAGGGAGCTACTTTGGTTGCTATTCGGCCCAGTGAGCAGTCCAACCCCAAGAAGGAGGTCTCTGATCTCTCTTGGGTTTCGACTGCCTTTGAGGAGCCGTATGGGACTGCCGCAAAGATGCTGGTGAAGAGGAGAACTTACTGCCTTGAGATGAACTCGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

422

Amino Acids

45.84

Weight (kDa)

6.02

Isoelectric Point (pI)

51.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 57 - 92 3.7e-06 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 225, 735
Acc36I ACCTGC 1 cut(s) 271
AccB1I GGYRCC 1 cut(s) 1039
AccI GTMKAC 4 cut(s) 111, 135, 306, 662
AccII CGCG 4 cut(s) 108, 256, 366, 1070
AccIII TCCGGA 1 cut(s) 588
AclWI GGATC 1 cut(s) 599
AcoI YGGCCR 2 cut(s) 235, 430
AcsI RAATTY 1 cut(s) 565
AcuI CTGAAG 2 cut(s) 848, 875
AcyI GRCGYC 4 cut(s) 222, 476, 531, 732
AfaI GTAC 2 cut(s) 965, 1067
AfiI CCNNNNNNNGG 6 cut(s) 181, 553, 657, 876, 1029, 1156
AflII CTTAAG 1 cut(s) 1103
AgsI TTSAA 3 cut(s) 208, 571, 707
AjnI CCWGG 2 cut(s) 420, 927
AleI CACNNNNGTG 1 cut(s) 554
AluBI AGCT 7 cut(s) 517, 598, 613, 692, 855, 982, 1112
AluI AGCT 7 cut(s) 517, 598, 613, 692, 855, 982, 1112
Alw21I GWGCWC 3 cut(s) 519, 561, 912
Alw26I GTCTC 4 cut(s) 105, 386, 742, 1168
AlwI GGATC 1 cut(s) 599
AlwNI CAGNNNCTG 1 cut(s) 872
Ama87I CYCGRG 4 cut(s) 129, 376, 518, 745
Aor13HI TCCGGA 1 cut(s) 588
AoxI GGCC 8 cut(s) 228, 235, 430, 525, 648, 1020, 1044, 1130
ApeKI GCWGC 3 cut(s) 243, 866, 979
ApoI RAATTY 1 cut(s) 565
ArsI GACNNNNNNTTYG 2 cut(s) 279, 311
AspLEI GCGC 3 cut(s) 258, 368, 1072
AspS9I GGNCC 7 cut(s) 229, 443, 648, 713, 846, 1045, 1131
AsuC2I CCSGG 6 cut(s) 130, 131, 140, 182, 711, 877
AsuHPI GGTGA 3 cut(s) 769, 1009, 1240
AvaI CYCGRG 4 cut(s) 129, 376, 518, 745
AvaII GGWCC 3 cut(s) 443, 713, 846
BanI GGYRCC 1 cut(s) 1039
BanII GRGCYC 1 cut(s) 519
BbsI GAAGAC 3 cut(s) 196, 388, 507
Bbv12I GWGCWC 3 cut(s) 519, 561, 912
BbvI GCAGC 3 cut(s) 230, 878, 991
BccI CCATC 5 cut(s) 13, 47, 73, 746, 1085
BceAI ACGGC 5 cut(s) 473, 523, 643, 758, 1186
BciT130I CCWGG 2 cut(s) 422, 929
BcnI CCSGG 6 cut(s) 130, 131, 140, 182, 711, 877
BcoDI GTCTC 4 cut(s) 105, 386, 742, 1168
BfaI CTAG 1 cut(s) 920
BfrI CTTAAG 1 cut(s) 1103
BfuAI ACCTGC 1 cut(s) 271
BglII AGATCT 2 cut(s) 22, 118
BisI GCNGC 8 cut(s) 157, 244, 259, 403, 511, 867, 980, 1215
BlsI GCNGC 8 cut(s) 158, 245, 260, 404, 512, 868, 981, 1216
Bme1390I CCNGG 8 cut(s) 130, 131, 140, 182, 422, 711, 877, 929
Bme18I GGWCC 3 cut(s) 443, 713, 846
BmeT110I CYCGRG 4 cut(s) 129, 376, 518, 745
BmgT120I GGNCC 7 cut(s) 229, 443, 648, 713, 846, 1045, 1131
BmiI GGNNCC 6 cut(s) 144, 445, 584, 715, 1041, 1200
BmrFI CCNGG 8 cut(s) 130, 131, 140, 182, 422, 711, 877, 929
BmrI ACTGGG 2 cut(s) 1069, 1128
BmsI GCATC 4 cut(s) 168, 230, 931, 1212
BmuI ACTGGG 2 cut(s) 1069, 1128
BpiI GAAGAC 3 cut(s) 196, 388, 507
BplI GAGNNNNNCTC 3 cut(s) 587, 619, 1244
BpmI CTGGAG 1 cut(s) 404
BpuEI CTTGAG 2 cut(s) 545, 1004
BpuMI CCSGG 6 cut(s) 130, 131, 140, 182, 711, 877
BsaHI GRCGYC 4 cut(s) 222, 476, 531, 732
BsaI GGTCTC 1 cut(s) 1168
BsaJI CCNNGG 3 cut(s) 129, 232, 439
BsaWI WCCGGW 2 cut(s) 387, 588
BsaXI ACNNNNNCTCC 2 cut(s) 722, 752
Bsc4I CCNNNNNNNGG 6 cut(s) 181, 553, 657, 876, 1029, 1156
Bse118I RCCGGY 2 cut(s) 527, 1042
Bse1I ACTGG 3 cut(s) 433, 1075, 1134
BseAI TCCGGA 1 cut(s) 588
BseBI CCWGG 2 cut(s) 422, 929
BseDI CCNNGG 3 cut(s) 129, 232, 439
BseGI GGATG 2 cut(s) 5, 1096
BseLI CCNNNNNNNGG 6 cut(s) 181, 553, 657, 876, 1029, 1156
BseMII CTCAG 3 cut(s) 33, 57, 566
BseNI ACTGG 3 cut(s) 433, 1075, 1134
BseX3I CGGCCG 1 cut(s) 235
BseXI GCAGC 3 cut(s) 230, 878, 991
BseYI CCCAGC 1 cut(s) 613
Bsh1236I CGCG 4 cut(s) 108, 256, 366, 1070
Bsh1285I CGRYCG 3 cut(s) 175, 238, 455
BshFI GGCC 8 cut(s) 230, 237, 432, 527, 650, 1022, 1046, 1132
BshNI GGYRCC 1 cut(s) 1039
BsiEI CGRYCG 3 cut(s) 175, 238, 455
BsiHKAI GWGCWC 3 cut(s) 519, 561, 912
BsiHKCI CYCGRG 4 cut(s) 129, 376, 518, 745
BslFI GGGAC 3 cut(s) 260, 429, 1222
BslI CCNNNNNNNGG 6 cut(s) 181, 553, 657, 876, 1029, 1156
BsmAI GTCTC 4 cut(s) 105, 386, 742, 1168
BsmBI CGTCTC 2 cut(s) 105, 742
BsmFI GGGAC 3 cut(s) 260, 429, 1222
BsnI GGCC 8 cut(s) 230, 237, 432, 527, 650, 1022, 1046, 1132
Bso31I GGTCTC 1 cut(s) 1168
BsoBI CYCGRG 4 cut(s) 129, 376, 518, 745
Bsp1286I GDGCHC 3 cut(s) 519, 561, 912
Bsp13I TCCGGA 1 cut(s) 588
Bsp1407I TGTACA 1 cut(s) 963
Bsp143I GATC 6 cut(s) 22, 118, 213, 452, 591, 1168
BspANI GGCC 8 cut(s) 230, 237, 432, 527, 650, 1022, 1046, 1132
BspCNI CTCAG 3 cut(s) 32, 56, 565
BspEI TCCGGA 1 cut(s) 588
BspFNI CGCG 4 cut(s) 108, 256, 366, 1070
BspLI GGNNCC 6 cut(s) 144, 445, 584, 715, 1041, 1200
BspMI ACCTGC 1 cut(s) 271
BspPI GGATC 1 cut(s) 599
BspT107I GGYRCC 1 cut(s) 1039
BspTI CTTAAG 1 cut(s) 1103
BspTNI GGTCTC 1 cut(s) 1168
BsrFI RCCGGY 2 cut(s) 527, 1042
BsrGI TGTACA 1 cut(s) 963
BsrI ACTGG 3 cut(s) 433, 1075, 1134
BssAI RCCGGY 2 cut(s) 527, 1042
BssECI CCNNGG 3 cut(s) 129, 232, 439
BssMI GATC 6 cut(s) 22, 118, 213, 452, 591, 1168
BssNI GRCGYC 4 cut(s) 222, 476, 531, 732
Bst2UI CCWGG 2 cut(s) 422, 929
Bst4CI ACNGT 2 cut(s) 677, 821
Bst6I CTCTTC 2 cut(s) 389, 1226
BstACI GRCGYC 4 cut(s) 222, 476, 531, 732
BstAFI CTTAAG 1 cut(s) 1103
BstAPI GCANNNNNTGC 2 cut(s) 872, 886
BstAUI TGTACA 1 cut(s) 963
BstC8I GCNNGC 6 cut(s) 486, 515, 525, 529, 611, 1044
BstDEI CTNAG 3 cut(s) 19, 43, 552
BstENI CCTNNNNNAGG 1 cut(s) 1027
BstF5I GGATG 2 cut(s) 5, 1096
BstFNI CGCG 4 cut(s) 108, 256, 366, 1070
BstHHI GCGC 3 cut(s) 258, 368, 1072
BstKTI GATC 6 cut(s) 25, 121, 216, 455, 594, 1171
BstMAI GTCTC 4 cut(s) 105, 386, 742, 1168
BstMBI GATC 6 cut(s) 22, 118, 213, 452, 591, 1168
BstMCI CGRYCG 3 cut(s) 175, 238, 455
BstMWI GCNNNNNNNGC 6 cut(s) 243, 615, 872, 886, 1019, 1138
BstNI CCWGG 2 cut(s) 422, 929
BstSCI CCNGG 8 cut(s) 128, 129, 138, 180, 420, 709, 875, 927
BstUI CGCG 4 cut(s) 108, 256, 366, 1070
BstV1I GCAGC 3 cut(s) 230, 878, 991
BstV2I GAAGAC 3 cut(s) 196, 388, 507
BstX2I RGATCY 2 cut(s) 22, 118
BstYI RGATCY 2 cut(s) 22, 118
BstZI CGGCCG 1 cut(s) 235
BsuRI GGCC 8 cut(s) 230, 237, 432, 527, 650, 1022, 1046, 1132
BtgZI GCGATG 1 cut(s) 765
BtsCI GGATG 2 cut(s) 5, 1096
BtsIMutI CAGTG 1 cut(s) 1141
BveI ACCTGC 1 cut(s) 271
Cac8I GCNNGC 6 cut(s) 486, 515, 525, 529, 611, 1044
CaiI CAGNNNCTG 1 cut(s) 872
CfoI GCGC 3 cut(s) 258, 368, 1072
Cfr10I RCCGGY 2 cut(s) 527, 1042
Cfr13I GGNCC 7 cut(s) 229, 443, 648, 713, 846, 1045, 1131
Cfr9I CCCGGG 1 cut(s) 129
CseI GACGC 6 cut(s) 97, 235, 301, 465, 520, 1042
Csp6I GTAC 2 cut(s) 964, 1066
CviAII CATG 2 cut(s) 94, 967
CviQI GTAC 2 cut(s) 964, 1066
DdeI CTNAG 3 cut(s) 19, 43, 552
DpnI GATC 6 cut(s) 24, 120, 215, 454, 593, 1170
DpnII GATC 6 cut(s) 22, 118, 213, 452, 591, 1168
EaeI YGGCCR 2 cut(s) 235, 430
EagI CGGCCG 1 cut(s) 235
Eam1104I CTCTTC 2 cut(s) 389, 1226
EarI CTCTTC 2 cut(s) 389, 1226
EciI GGCGGA 2 cut(s) 331, 337
Ecl136II GAGCTC 1 cut(s) 517
EclXI CGGCCG 1 cut(s) 235
Eco24I GRGCYC 1 cut(s) 519
Eco31I GGTCTC 1 cut(s) 1168
Eco47I GGWCC 3 cut(s) 443, 713, 846
Eco52I CGGCCG 1 cut(s) 235
Eco53kI GAGCTC 1 cut(s) 517
Eco57I CTGAAG 2 cut(s) 848, 875
Eco88I CYCGRG 4 cut(s) 129, 376, 518, 745
EcoICRI GAGCTC 1 cut(s) 517
EcoNI CCTNNNNNAGG 1 cut(s) 1027
EcoO109I RGGNCCY 1 cut(s) 229
EcoRII CCWGG 2 cut(s) 420, 927
EcoT38I GRGCYC 1 cut(s) 519
Esp3I CGTCTC 2 cut(s) 105, 742
FaeI CATG 2 cut(s) 97, 970
FaiI YATR 6 cut(s) 95, 620, 797, 968, 1055, 1206
FaqI GGGAC 3 cut(s) 260, 429, 1222
FatI CATG 2 cut(s) 93, 966
FauI CCCGC 3 cut(s) 285, 455, 772
FblI GTMKAC 4 cut(s) 111, 135, 306, 662
Fnu4HI GCNGC 8 cut(s) 157, 244, 259, 403, 511, 867, 980, 1215
FokI GGATG 1 cut(s) 1103
FriOI GRGCYC 1 cut(s) 519
Fsp4HI GCNGC 8 cut(s) 157, 244, 259, 403, 511, 867, 980, 1215
FspBI CTAG 1 cut(s) 920
GlaI GCGC 3 cut(s) 257, 367, 1071
GluI GCNGC 8 cut(s) 157, 244, 259, 403, 511, 867, 980, 1215
GsaI CCCAGC 1 cut(s) 617
GsuI CTGGAG 1 cut(s) 404
HaeIII GGCC 8 cut(s) 230, 237, 432, 527, 650, 1022, 1046, 1132
HgaI GACGC 6 cut(s) 97, 235, 301, 465, 520, 1042
HhaI GCGC 3 cut(s) 258, 368, 1072
Hin1I GRCGYC 4 cut(s) 222, 476, 531, 732
Hin1II CATG 2 cut(s) 97, 970
Hin6I GCGC 3 cut(s) 256, 366, 1070
HinP1I GCGC 3 cut(s) 256, 366, 1070
HincII GTYRAC 1 cut(s) 307
HindII GTYRAC 1 cut(s) 307
HinfI GANTC 7 cut(s) 185, 329, 379, 577, 682, 703, 803
HphI GGTGA 3 cut(s) 769, 1009, 1240
Hpy166II GTNNAC 6 cut(s) 112, 136, 307, 663, 824, 846
Hpy188I TCNGA 6 cut(s) 22, 123, 322, 355, 907, 1168
Hpy188III TCNNGA 4 cut(s) 376, 493, 562, 589
Hpy8I GTNNAC 6 cut(s) 112, 136, 307, 663, 824, 846
HpyAV CCTTC 2 cut(s) 382, 1150
HpyCH4III ACNGT 2 cut(s) 677, 821
HpyCH4IV ACGT 3 cut(s) 222, 291, 732
HpyF10VI GCNNNNNNNGC 6 cut(s) 243, 615, 872, 886, 1019, 1138
HpyF3I CTNAG 3 cut(s) 19, 43, 552
HpySE526I ACGT 3 cut(s) 222, 291, 732
Hsp92I GRCGYC 4 cut(s) 222, 476, 531, 732
Hsp92II CATG 2 cut(s) 97, 970
HspAI GCGC 3 cut(s) 256, 366, 1070
Kpn2I TCCGGA 1 cut(s) 588
KroI GCCGGC 2 cut(s) 527, 1042
KroNI GCCGGC 2 cut(s) 529, 1044
Kzo9I GATC 6 cut(s) 22, 118, 213, 452, 591, 1168
LmnI GCTCC 4 cut(s) 689, 907, 1109, 1198
Lsp1109I GCAGC 3 cut(s) 230, 878, 991
LweI GCATC 4 cut(s) 168, 230, 931, 1212
MaeI CTAG 1 cut(s) 920
MaeII ACGT 3 cut(s) 222, 291, 732
MaeIII GTNAC 3 cut(s) 360, 532, 775
MalI GATC 6 cut(s) 24, 120, 215, 454, 593, 1170
MboI GATC 6 cut(s) 22, 118, 213, 452, 591, 1168
MboII GAAGA 6 cut(s) 196, 376, 388, 512, 1008, 1243
MflI RGATCY 2 cut(s) 22, 118
MhlI GDGCHC 3 cut(s) 519, 561, 912
MluCI AATT 1 cut(s) 565
MlyI GAGTC 3 cut(s) 179, 388, 797
MmeI TCCRAC 4 cut(s) 345, 378, 1059, 1170
MroI TCCGGA 1 cut(s) 588
MroNI GCCGGC 2 cut(s) 527, 1042
MseI TTAA 1 cut(s) 1104
MslI CAYNNNNRTG 1 cut(s) 554
MspCI CTTAAG 1 cut(s) 1103
MspR9I CCNGG 8 cut(s) 130, 131, 140, 182, 422, 711, 877, 929
MvaI CCWGG 2 cut(s) 422, 929
MvnI CGCG 4 cut(s) 108, 256, 366, 1070
MwoI GCNNNNNNNGC 6 cut(s) 243, 615, 872, 886, 1019, 1138
NaeI GCCGGC 2 cut(s) 529, 1044
NciI CCSGG 6 cut(s) 130, 131, 140, 182, 711, 877
NdeII GATC 6 cut(s) 22, 118, 213, 452, 591, 1168
NgoMIV GCCGGC 2 cut(s) 527, 1042
NlaIII CATG 2 cut(s) 97, 970
NlaIV GGNNCC 6 cut(s) 144, 445, 584, 715, 1041, 1200
NmeAIII GCCGAG 2 cut(s) 213, 408
NmuCI GTSAC 3 cut(s) 360, 532, 775
OliI CACNNNNGTG 1 cut(s) 554
PaeR7I CTCGAG 2 cut(s) 376, 518
PcsI WCGNNNNNNNCGW 6 cut(s) 168, 291, 303, 476, 510, 777
PdiI GCCGGC 2 cut(s) 529, 1044
PfeI GAWTC 4 cut(s) 329, 577, 682, 703
PflFI GACNNNGTC 2 cut(s) 311, 734
PfoI TCCNGGA 1 cut(s) 180
PkrI GCNGC 8 cut(s) 158, 245, 260, 404, 512, 868, 981, 1216
Ple19I CGATCG 1 cut(s) 455
PleI GAGTC 3 cut(s) 179, 387, 797
PpsI GAGTC 3 cut(s) 179, 387, 797
Psp124BI GAGCTC 1 cut(s) 519
Psp6I CCWGG 2 cut(s) 420, 927
PspFI CCCAGC 1 cut(s) 613
PspGI CCWGG 2 cut(s) 420, 927
PspN4I GGNNCC 6 cut(s) 144, 445, 584, 715, 1041, 1200
PspPI GGNCC 7 cut(s) 229, 443, 648, 713, 846, 1045, 1131
PspXI VCTCGAGB 1 cut(s) 518
PstNI CAGNNNCTG 1 cut(s) 872
PsuI RGATCY 2 cut(s) 22, 118
PsyI GACNNNGTC 2 cut(s) 311, 734
PvuI CGATCG 1 cut(s) 455
RsaI GTAC 2 cut(s) 965, 1067
RsaNI GTAC 2 cut(s) 964, 1066
RseI CAYNNNNRTG 1 cut(s) 554
SacI GAGCTC 1 cut(s) 519
SalI GTCGAC 1 cut(s) 305
SaqAI TTAA 1 cut(s) 1104
SatI GCNGC 8 cut(s) 157, 244, 259, 403, 511, 867, 980, 1215
Sau3AI GATC 6 cut(s) 22, 118, 213, 452, 591, 1168
Sau96I GGNCC 7 cut(s) 229, 443, 648, 713, 846, 1045, 1131
SchI GAGTC 3 cut(s) 179, 388, 797
ScrFI CCNGG 8 cut(s) 130, 131, 140, 182, 422, 711, 877, 929
SduI GDGCHC 3 cut(s) 519, 561, 912
SfaNI GCATC 4 cut(s) 168, 230, 931, 1212
Sfr274I CTCGAG 2 cut(s) 376, 518
SinI GGWCC 3 cut(s) 443, 713, 846
SlaI CTCGAG 2 cut(s) 376, 518
SmaI CCCGGG 1 cut(s) 131
SmiMI CAYNNNNRTG 1 cut(s) 554
SmlI CTYRAG 6 cut(s) 376, 518, 560, 983, 1103, 1250
SmoI CTYRAG 6 cut(s) 376, 518, 560, 983, 1103, 1250
Sse9I AATT 1 cut(s) 565
SspMI CTAG 1 cut(s) 920
SstI GAGCTC 1 cut(s) 519
StyD4I CCNGG 8 cut(s) 128, 129, 138, 180, 420, 709, 875, 927
TaaI ACNGT 2 cut(s) 677, 821
TaiI ACGT 3 cut(s) 225, 294, 735
TaqI TCGA 8 cut(s) 162, 171, 285, 306, 377, 519, 594, 1184
TaqII GACCGA 2 cut(s) 431, 953
TasI AATT 1 cut(s) 565
TatI WGTACW 1 cut(s) 963
TauI GCSGC 5 cut(s) 159, 261, 405, 513, 1217
TfiI GAWTC 4 cut(s) 329, 577, 682, 703
Tru1I TTAA 1 cut(s) 1104
Tru9I TTAA 1 cut(s) 1104
TscAI CASTG 1 cut(s) 1141
TseFI GTSAC 3 cut(s) 360, 532, 775
TseI GCWGC 3 cut(s) 243, 866, 979
Tsp45I GTSAC 3 cut(s) 360, 532, 775
TspDTI ATGAA 1 cut(s) 983
TspGWI ACGGA 1 cut(s) 804
TspMI CCCGGG 1 cut(s) 129
TspRI CASTG 1 cut(s) 1141
Tth111I GACNNNGTC 2 cut(s) 311, 734
Vha464I CTTAAG 1 cut(s) 1103
VpaK11BI GGWCC 3 cut(s) 443, 713, 846
XagI CCTNNNNNAGG 1 cut(s) 1027
XapI RAATTY 1 cut(s) 565
XcmI CCANNNNNNNNNTGG 1 cut(s) 1033
XhoI CTCGAG 2 cut(s) 376, 518
XmaI CCCGGG 1 cut(s) 129
XmiI GTMKAC 4 cut(s) 111, 135, 306, 662
XspI CTAG 1 cut(s) 920
ZraI GACGTC 2 cut(s) 223, 733
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.