MD11G1267000.v1.1

F-box LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000062
Physical Location & Seq
Forward (+)
38206055 .. 38210003
3949 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1267000.v1.1.491

Sequence Viewer

Length: 1503 bp
ATGGGTTCTCAGTCAAAGCCTCTCATGCTAGCAAAGAAGCCAACGCCACAAGTAATAGTTAAGGATAGGATCAGTCAATTGCCGGAATCAGTTCTTTGTCACATACTTTCCTTAATTCCAACAAAATATGCTGTGAGGACCAGCGTTCTCTCTAAAAGATGGAAGAAATTATGTTACCTTCAATTCCCCCTTGGGGTACAAATGAGTAAAGCAAGAGTTAAAGATAGGATCAGTGGGTTGCCTGATCCAATTCTTTGCCATATGCTTTCCTTCCTGCCAACAAAATGTGCGATGAGGTGCAGCATTCTGTCTACAAGATGGAAGAACATTTGGAATTCCGTTCCGAATCTAGACTTCGAAAACAAAGATAAGTCTGAAACTGTTGGTTTTATGAATTTTGTTGACCGTATACTTAAATTTCCCGGCTCAATAGACATTCAGAAATTTCGTCTTCATTGTTCCTATGTTGGGGATTACACTCGTATCGATGGTTGGATTCGCACTGCCATTAGGCGTAAGGCTGTTGAACTTGATCTTGGTGTATCTAATACGGGCAAGACTTTGGAGTTACCCAAAAGCGTTTTCATGTGCAAAACACTGGTGGTCTTAAAAGTGAAGTCAAATGTTATTACCTACAATCCACCCACATCTGGGTGTTTCCCAAGTCTCAAGTTTCTCCATATCACAGCTGAAGGTCCCTACTGTGACTCAGTGGAAAATCTCTTATCCTGTTGCCCGGTACTTGAAGATTTGATAATAGATATAACGCTTGGTGTTCGAGGTTGCAATTTCAAGATCTCTGCTTCTGAACTAAAGAGGCTAATTATAACATTCCACCATTTATTGATTCAATTAGGTGGGGAGAAAGTCTTTATTAATGCTCCGAAGCTTGAAAACTTTGACGTTAAGGAGGATATTTTGGCCAATTATTGTTTGGAGAATGCGAAGTCCCTTGTCAAAGCCAATGTCGATCTCTATTGCTATTGTGTACATCGAGATGTAGAATTTGTAACAAATGCAACTGCACTCCTTGAAGGGATATCCAATGTCAAATATCTCTGTCTTTCGGCTCGTGTTTTGTGGGATCATTGTCTGCCGGCTTTTGATAATTTGAGCGAGTTGAAGCTGGTTCTATATGATTCCTATAACTGGGATTTGCTCATGAAGTTGCTCGATAAATCACCTAATTTGGAACATCTTGTCTTAGAACACAAAGAAGACAAGGACTGTGTTCAACACTACTCGTTTGGACAACACTCAAATTTTAAATGTAACCTACCCTCAGAGTTTCGATGGCATACACCGGAGTATGTGCCTGCTTGTTTGACATCACACCTCAAGACTATCACCATAAGAGGATTCAAGGGATATCCGCATGAGAAGAAAGGGGCAAGGTTTTTGTTCGAGAATGGTATTGTTTTGGATAAGATGGCTATCTATAATGATTTAGGTGAGGAATTTACATTGTTCCAGAGGGGTTCGGGGACTTGTCTAGCTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

501

Amino Acids

56.9

Weight (kDa)

8.77

Isoelectric Point (pI)

36.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 24 - 58 1.4e-07 F-box domain
F-box PF00646 77 - 116 2e-06 F-box domain
LRR_At1g61320_AtMIF1 PF23622 139 - 423 2.5e-12 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 162 - 308 3.8e-13 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 435 - 479 3.3e-13 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 827
AccI GTMKAC 2 cut(s) 311, 409
AciI CCGC 1 cut(s) 1373
AclWI GGATC 4 cut(s) 77, 236, 239, 1092
AcoI YGGCCR 1 cut(s) 921
AcsI RAATTY 7 cut(s) 334, 394, 416, 443, 1004, 1261, 1457
AcuI CTGAAG 1 cut(s) 711
AfaI GTAC 3 cut(s) 198, 741, 990
AfiI CCNNNNNNNGG 5 cut(s) 193, 468, 650, 651, 1149
AjuI GAANNNNNNNTTGG 4 cut(s) 519, 551, 566, 598
AluBI AGCT 4 cut(s) 689, 889, 1126, 1496
AluI AGCT 4 cut(s) 689, 889, 1126, 1496
Alw26I GTCTC 1 cut(s) 671
AlwI GGATC 4 cut(s) 77, 236, 239, 1092
AoxI GGCC 1 cut(s) 921
ApeKI GCWGC 1 cut(s) 300
ApoI RAATTY 7 cut(s) 334, 394, 416, 443, 1004, 1261, 1457
ArsI GACNNNNNNTTYG 2 cut(s) 951, 983
AseI ATTAAT 1 cut(s) 876
Asp700I GAANNNNTTC 1 cut(s) 90
AspS9I GGNCC 2 cut(s) 138, 695
AsuC2I CCSGG 2 cut(s) 423, 737
AsuHPI GGTGA 3 cut(s) 1173, 1339, 1463
AsuII TTCGAA 1 cut(s) 357
AsuNHI GCTAGC 1 cut(s) 28
AvaII GGWCC 2 cut(s) 138, 695
BaeI ACNNNNGTAYC 2 cut(s) 466, 499
BalI TGGCCA 1 cut(s) 923
BauI CACGAG 1 cut(s) 1071
BbsI GAAGAC 2 cut(s) 443, 1224
BbvI GCAGC 1 cut(s) 312
BccI CCATC 5 cut(s) 153, 312, 482, 1287, 1423
BcnI CCSGG 2 cut(s) 423, 737
BcoDI GTCTC 1 cut(s) 671
BfaI CTAG 3 cut(s) 29, 350, 1493
BglII AGATCT 1 cut(s) 795
BisI GCNGC 1 cut(s) 301
BlsI GCNGC 1 cut(s) 302
Bme1390I CCNGG 2 cut(s) 423, 737
Bme18I GGWCC 2 cut(s) 138, 695
BmgT120I GGNCC 2 cut(s) 138, 695
BmiI GGNNCC 1 cut(s) 697
BmrFI CCNGG 2 cut(s) 423, 737
BmrI ACTGGG 1 cut(s) 1159
BmtI GCTAGC 1 cut(s) 32
BmuI ACTGGG 1 cut(s) 1159
BpiI GAAGAC 2 cut(s) 443, 1224
Bpu14I TTCGAA 1 cut(s) 357
BpuEI CTTGAG 2 cut(s) 653, 1322
BpuMI CCSGG 2 cut(s) 423, 737
Bsa29I ATCGAT 1 cut(s) 486
BsaBI GATNNNNATC 1 cut(s) 1433
BsaJI CCNNGG 1 cut(s) 190
BsaWI WCCGGW 1 cut(s) 1303
Bsc4I CCNNNNNNNGG 5 cut(s) 193, 468, 650, 651, 1149
Bse118I RCCGGY 1 cut(s) 1096
Bse1I ACTGG 2 cut(s) 603, 1154
Bse8I GATNNNNATC 1 cut(s) 1433
BseCI ATCGAT 1 cut(s) 486
BseDI CCNNGG 1 cut(s) 190
BseJI GATNNNNATC 1 cut(s) 1433
BseLI CCNNNNNNNGG 5 cut(s) 193, 468, 650, 651, 1149
BseMII CTCAG 3 cut(s) 23, 723, 1296
BseNI ACTGG 2 cut(s) 603, 1154
BseXI GCAGC 1 cut(s) 312
BsgI GTGCAG 2 cut(s) 319, 1008
BshFI GGCC 1 cut(s) 923
BshVI ATCGAT 1 cut(s) 486
BsiSI CCGG 5 cut(s) 83, 423, 737, 1097, 1304
BslFI GGGAC 3 cut(s) 681, 934, 1498
BslI CCNNNNNNNGG 5 cut(s) 193, 468, 650, 651, 1149
BsmAI GTCTC 1 cut(s) 671
BsmFI GGGAC 3 cut(s) 681, 934, 1498
BsmI GAATGC 2 cut(s) 303, 946
BsnI GGCC 1 cut(s) 923
Bsp119I TTCGAA 1 cut(s) 357
Bsp1407I TGTACA 1 cut(s) 988
Bsp143I GATC 7 cut(s) 69, 228, 244, 532, 795, 970, 1084
BspACI CCGC 1 cut(s) 1373
BspANI GGCC 1 cut(s) 923
BspCNI CTCAG 3 cut(s) 22, 722, 1295
BspDI ATCGAT 1 cut(s) 486
BspHI TCATGA 1 cut(s) 1161
BspLI GGNNCC 1 cut(s) 697
BspOI GCTAGC 1 cut(s) 32
BspPI GGATC 4 cut(s) 77, 236, 239, 1092
BspT104I TTCGAA 1 cut(s) 357
BsrFI RCCGGY 1 cut(s) 1096
BsrGI TGTACA 1 cut(s) 988
BsrI ACTGG 2 cut(s) 603, 1154
BssAI RCCGGY 1 cut(s) 1096
BssECI CCNNGG 1 cut(s) 190
BssMI GATC 7 cut(s) 69, 228, 244, 532, 795, 970, 1084
BssNAI GTATAC 1 cut(s) 410
BssSI CACGAG 1 cut(s) 1071
BssT1I CCWWGG 1 cut(s) 190
Bst1107I GTATAC 1 cut(s) 410
Bst2BI CACGAG 1 cut(s) 1071
Bst4CI ACNGT 4 cut(s) 382, 407, 704, 1229
BstAUI TGTACA 1 cut(s) 988
BstBI TTCGAA 1 cut(s) 357
BstC8I GCNNGC 3 cut(s) 30, 1098, 1317
BstDEI CTNAG 4 cut(s) 9, 709, 1204, 1282
BstKTI GATC 7 cut(s) 72, 231, 247, 535, 798, 973, 1087
BstMAI GTCTC 1 cut(s) 671
BstMBI GATC 7 cut(s) 69, 228, 244, 532, 795, 970, 1084
BstMWI GCNNNNNNNGC 1 cut(s) 25
BstSCI CCNGG 2 cut(s) 421, 735
BstV1I GCAGC 1 cut(s) 312
BstV2I GAAGAC 2 cut(s) 443, 1224
BstX2I RGATCY 1 cut(s) 795
BstYI RGATCY 1 cut(s) 795
BstZ17I GTATAC 1 cut(s) 410
Bsu15I ATCGAT 1 cut(s) 486
BsuRI GGCC 1 cut(s) 923
BsuTUI ATCGAT 1 cut(s) 486
BtgZI GCGATG 1 cut(s) 305
BtsI GCAGTG 1 cut(s) 501
BtsIMutI CAGTG 4 cut(s) 238, 501, 596, 717
Cac8I GCNNGC 3 cut(s) 30, 1098, 1317
CciI TCATGA 1 cut(s) 1161
Cfr10I RCCGGY 1 cut(s) 1096
Cfr13I GGNCC 2 cut(s) 138, 695
ClaI ATCGAT 1 cut(s) 486
Csp6I GTAC 3 cut(s) 197, 740, 989
CviAII CATG 4 cut(s) 25, 586, 1162, 1376
CviQI GTAC 3 cut(s) 197, 740, 989
DdeI CTNAG 4 cut(s) 9, 709, 1204, 1282
DpnI GATC 7 cut(s) 71, 230, 246, 534, 797, 972, 1086
DpnII GATC 7 cut(s) 69, 228, 244, 532, 795, 970, 1084
DraI TTTAAA 1 cut(s) 1267
EaeI YGGCCR 1 cut(s) 921
Eco130I CCWWGG 1 cut(s) 190
Eco32I GATATC 2 cut(s) 1041, 1370
Eco47I GGWCC 2 cut(s) 138, 695
Eco57I CTGAAG 1 cut(s) 711
EcoO109I RGGNCCY 1 cut(s) 695
EcoRI GAATTC 1 cut(s) 334
EcoRV GATATC 2 cut(s) 1041, 1370
EcoT14I CCWWGG 1 cut(s) 190
ErhI CCWWGG 1 cut(s) 190
FaeI CATG 4 cut(s) 28, 589, 1165, 1379
FaqI GGGAC 3 cut(s) 681, 934, 1498
FatI CATG 4 cut(s) 24, 585, 1161, 1375
FauNDI CATATG 1 cut(s) 261
FblI GTMKAC 2 cut(s) 311, 409
Fnu4HI GCNGC 1 cut(s) 301
Fsp4HI GCNGC 1 cut(s) 301
FspBI CTAG 3 cut(s) 29, 350, 1493
GluI GCNGC 1 cut(s) 301
HaeIII GGCC 1 cut(s) 923
HapII CCGG 5 cut(s) 83, 423, 737, 1097, 1304
Hin1II CATG 4 cut(s) 28, 589, 1165, 1379
HincII GTYRAC 1 cut(s) 403
HindII GTYRAC 1 cut(s) 403
HindIII AAGCTT 1 cut(s) 887
HinfI GANTC 7 cut(s) 86, 346, 496, 707, 847, 1139, 1359
HpaII CCGG 5 cut(s) 83, 423, 737, 1097, 1304
HphI GGTGA 3 cut(s) 1173, 1339, 1463
Hpy166II GTNNAC 4 cut(s) 312, 403, 410, 989
Hpy188I TCNGA 6 cut(s) 345, 376, 441, 808, 885, 1285
Hpy188III TCNNGA 7 cut(s) 350, 793, 995, 1162, 1339, 1405, 1471
Hpy8I GTNNAC 4 cut(s) 312, 403, 410, 989
HpyAV CCTTC 4 cut(s) 188, 280, 686, 1028
HpyCH4III ACNGT 4 cut(s) 382, 407, 704, 1229
HpyCH4IV ACGT 1 cut(s) 903
HpyCH4V TGCA 5 cut(s) 300, 591, 786, 1019, 1025
HpyF10VI GCNNNNNNNGC 1 cut(s) 25
HpyF3I CTNAG 4 cut(s) 9, 709, 1204, 1282
HpySE526I ACGT 1 cut(s) 903
Hsp92II CATG 4 cut(s) 28, 589, 1165, 1379
KroI GCCGGC 1 cut(s) 1096
KroNI GCCGGC 1 cut(s) 1098
Kzo9I GATC 7 cut(s) 69, 228, 244, 532, 795, 970, 1084
LmnI GCTCC 1 cut(s) 886
Lsp1109I GCAGC 1 cut(s) 312
MaeI CTAG 3 cut(s) 29, 350, 1493
MaeII ACGT 1 cut(s) 903
MaeIII GTNAC 6 cut(s) 98, 173, 567, 704, 1009, 1271
MalI GATC 7 cut(s) 71, 230, 246, 534, 797, 972, 1086
MboI GATC 7 cut(s) 69, 228, 244, 532, 795, 970, 1084
MboII GAAGA 6 cut(s) 175, 334, 443, 758, 1229, 1393
MfeI CAATTG 1 cut(s) 77
MflI RGATCY 1 cut(s) 795
MlsI TGGCCA 1 cut(s) 923
MluNI TGGCCA 1 cut(s) 923
MlyI GAGTC 1 cut(s) 701
MmeI TCCRAC 2 cut(s) 143, 473
Mox20I TGGCCA 1 cut(s) 923
MroNI GCCGGC 1 cut(s) 1096
MroXI GAANNNNTTC 1 cut(s) 90
MscI TGGCCA 1 cut(s) 923
MseI TTAA 8 cut(s) 60, 113, 219, 414, 608, 876, 906, 1266
MslI CAYNNNNRTG 2 cut(s) 652, 996
Msp20I TGGCCA 1 cut(s) 923
MspA1I CMGCKG 1 cut(s) 689
MspI CCGG 5 cut(s) 83, 423, 737, 1097, 1304
MspR9I CCNGG 2 cut(s) 423, 737
MunI CAATTG 1 cut(s) 77
Mva1269I GAATGC 2 cut(s) 303, 946
MwoI GCNNNNNNNGC 1 cut(s) 25
NaeI GCCGGC 1 cut(s) 1098
NciI CCSGG 2 cut(s) 423, 737
NdeI CATATG 1 cut(s) 261
NdeII GATC 7 cut(s) 69, 228, 244, 532, 795, 970, 1084
NgoMIV GCCGGC 1 cut(s) 1096
NheI GCTAGC 1 cut(s) 28
NlaIII CATG 4 cut(s) 28, 589, 1165, 1379
NlaIV GGNNCC 1 cut(s) 697
NmuCI GTSAC 2 cut(s) 98, 704
NspV TTCGAA 1 cut(s) 357
PagI TCATGA 1 cut(s) 1161
PctI GAATGC 2 cut(s) 303, 946
PdiI GCCGGC 1 cut(s) 1098
PdmI GAANNNNTTC 1 cut(s) 90
PfeI GAWTC 6 cut(s) 86, 346, 496, 847, 1139, 1359
PkrI GCNGC 1 cut(s) 302
PleI GAGTC 1 cut(s) 701
PpsI GAGTC 1 cut(s) 701
PpuMI RGGWCCY 1 cut(s) 695
PshBI ATTAAT 1 cut(s) 876
PsiI TTATAA 1 cut(s) 827
Psp5II RGGWCCY 1 cut(s) 695
PspN4I GGNNCC 1 cut(s) 697
PspPI GGNCC 2 cut(s) 138, 695
PspPPI RGGWCCY 1 cut(s) 695
PsuI RGATCY 1 cut(s) 795
PvuII CAGCTG 1 cut(s) 689
RsaI GTAC 3 cut(s) 198, 741, 990
RsaNI GTAC 3 cut(s) 197, 740, 989
RseI CAYNNNNRTG 2 cut(s) 652, 996
SaqAI TTAA 8 cut(s) 60, 113, 219, 414, 608, 876, 906, 1266
SatI GCNGC 1 cut(s) 301
Sau3AI GATC 7 cut(s) 69, 228, 244, 532, 795, 970, 1084
Sau96I GGNCC 2 cut(s) 138, 695
SchI GAGTC 1 cut(s) 701
ScrFI CCNGG 2 cut(s) 423, 737
SfuI TTCGAA 1 cut(s) 357
SinI GGWCC 2 cut(s) 138, 695
SmiMI CAYNNNNRTG 2 cut(s) 652, 996
SmlI CTYRAG 2 cut(s) 668, 1337
SmoI CTYRAG 2 cut(s) 668, 1337
SsiI CCGC 1 cut(s) 1373
SspMI CTAG 3 cut(s) 29, 350, 1493
StyD4I CCNGG 2 cut(s) 421, 735
StyI CCWWGG 1 cut(s) 190
TaaI ACNGT 4 cut(s) 382, 407, 704, 1229
TaiI ACGT 1 cut(s) 906
TaqI TCGA 8 cut(s) 357, 486, 778, 969, 994, 1173, 1291, 1404
TatI WGTACW 1 cut(s) 988
TfiI GAWTC 6 cut(s) 86, 346, 496, 847, 1139, 1359
Tru1I TTAA 8 cut(s) 60, 113, 219, 414, 608, 876, 906, 1266
Tru9I TTAA 8 cut(s) 60, 113, 219, 414, 608, 876, 906, 1266
TscAI CASTG 4 cut(s) 238, 508, 603, 717
TseFI GTSAC 2 cut(s) 98, 704
TseI GCWGC 1 cut(s) 300
Tsp45I GTSAC 2 cut(s) 98, 704
TspDTI ATGAA 4 cut(s) 407, 443, 574, 1178
TspGWI ACGGA 1 cut(s) 328
TspRI CASTG 4 cut(s) 238, 508, 603, 717
VpaK11BI GGWCC 2 cut(s) 138, 695
VspI ATTAAT 1 cut(s) 876
XapI RAATTY 7 cut(s) 334, 394, 416, 443, 1004, 1261, 1457
XbaI TCTAGA 1 cut(s) 349
XcmI CCANNNNNNNNNTGG 1 cut(s) 931
XmiI GTMKAC 2 cut(s) 311, 409
XmnI GAANNNNTTC 1 cut(s) 90
XspI CTAG 3 cut(s) 29, 350, 1493
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.