FvH4_3g21190

F-box FBD LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000062
Physical Location & Seq
Reverse (-)
14202860 .. 14207300
4441 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g21190.t1

Sequence Viewer

Length: 2379 bp
ATGTCAGAGGTTCAAGCAAAAAAAGTTAATAAAGATAGGATCAGTGCATTACCAGATGAAGTCATTTGTCACATCCTTTCGTTCCTTAAAACAGAAGATGTTGTGATGACCATATTTCTGTCTAAAAGATGGAAGAACATTTGGGCCTCTGTTCGGAGTCTAGACTTTTGCGACACAGGGAACCCTGACACTATTTCTTTTTCGAGGTTTATTGACAATGTACTCTTCTTCCGTGACTCAACAGACATTCATAAGTTTCGGCTCCATTCCATTAGTGTTGAGGATTTTGATCGTGTTTGTGGTTGGATTGGCGCAGCCGTTAGGCGCAATGTTGCTGAACTTAATCTTTCTGTTAATTATTATGGAGGTGATGAGGACCACCCTCAGATATTTGAGTTGCCTCAGAGTGTTTTCACATGTAAAACTTTGAGGGTTTTGCAGTTGTGGTCAAATTTTATTGTTAATGCTCCTGCATCAGGGTGTTTTCCGAATCTCAAGTCTCTCTATGTTCATTTTGATCGTCCTGTTAACAACTCAATGGAGAAGCTCTTTTCTTGCTGCCCTGTGCTGGAAGATCTGAGCATACATGGAACTCATGGCCGGTATGGAGATGAGGCCGTTTTGAATTTCACTGTATCTGCACCTGAACTGAAGACACTTAAAGTACGTTGGACGACGCAAAATGATTATGAGAAGTGCAACTTTCTTGTTGTTGCCCCAAAGCTTGAAACTTTTCATCTCTGGCTGTACCCTTCAACTGATTGTTATTTGGAGAATGTAAAATCTCTAGTCAGAGTTACTATTGCTCTACAAGACCATGTGGCAGATGAAGATCGTCTGTTTTCTATCCGTGGAACTGCGCTTTTGGCAGTAATTTCCAGTGTTAGACACTTGTCTCTTTCAGCACATTGTTTGAAAGGTTGTTGTCTTCCTGTCTTTGATAAGTTGAGGCGATTGGAGCTTGCTCTTTACAATTGCTATTACTGGGAACTGCTAAAAGTGCTTCTCAGGAGATCACCTAGACTGGAATATCTTGTCTTAGAGCTGAAAGACTTCATGTGTCCCGGAGCATCTTCAGATCATCAATGGAGTACCCCAGATTCGGTACCTATCTGTTTGTTGACGCACCTCAAGACTGTCTCTATATGGGGATTTAAAGGAAAACCAGATGAGATGGATGCAGCAAAGTACTTGTTAATGAAAGGTTTGATGGCAGAGCTTGAACCAAAAAGAGTTAAAGATAGAATTAGTGCATTACCAGATGCAGTTCTTTGTCACATCCTTTCATTCCTTTCAACAGACGAAGCTGTGGCTACCTACATTTTGTCTAAGAGATGGAAGAAAGTTTGGGCATCTGTTCCAAATCTCGACTTTGATGATTCCAACATATCTGAGTCTGTTCCTTTTTTGAGGTTTGTGGATAATGTACTGTTCTATCGTGACTCAACAGACATTCAAACATTTCGTCTTCAGTCTTCCTGCATTGAGGATTTTGCTCGTATTCGTGGTTGGATTGAAACTGCTGTTAGGCGTAATGTTGTGGAACTTGATATATCTGTTGAGGATTATGCAGGTGATGAAGATCACCCTCGGGTTTTGGAGTTGCCTGAGAGGGTTTTCAGATTCAAAACGCTTGTGAATTTGGTGTTGCGTTCAAACTTTATCATCAATCCTCCTGCATCAGGGTGTTTCCCAAGCGTCAAGTCCCTCATTGTTTATATTGGTCATCCTGTCGACAAATCTATTGAGAAGCTTTTTTCATGCTGCCCGATTGTTTTTTTGGAGAATTCTGAAACTTTAGTCAAAGTTACTATTACTCTCCATGACCCGCTCCATGACAATTCTGCAGATGCAGATCATCACTTTGCTATCCGTGGAACTGCGCTGCTGGCAGGAATTTCTAGTGCTAGGTCCTTGTATCTTTCAGCGCATCGTTTGAAAGAGTGCTGTCTGCCTACTTTTGACAAGTTGAGCAGATTGGAGTTGATTCTTTACAATTGCTATTACTGGGAATTGCTGATACAGATGCTCAAGAGATCACCTAATCTGGAAAATCTTGTCTTGGAACTTAATGAATGCAAGTGTGGAGAATCCTCGGATCATCAATGGAGTCCACCACAGTTTGTGCCTAGATGTTTACTGTCACAACTCAAGACAATCTCTATAAGGGGATTCAAGAGTAAAGTAGATGAGATGAAGTATTTGTTGGAAAATGGGGAAGTTTTGAAGAAGATGACTATTTACTATAATGATCAATTGTGCATACAAGAAGAGTTACACAAGCAATTATCTATCTTTCAGTGGGGTTCAGAGACTTGTCAAGTTGAATTTTTATCAGACATAAGAGAAATAAATTCGGCCTCTTTAGGTATGTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

793

Amino Acids

90.85

Weight (kDa)

6.12

Isoelectric Point (pI)

44.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 14 - 53 2e-08 F-box domain
LRR_At1g61320_AtMIF1 PF23622 83 - 386 8.8e-08 At1g61320/AtMIF1, LRR domain
LRR_At5g56370 PF24758 101 - 249 2.5e-13 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 366 - 399 1.9e-08 FBD
FBD PF08387 706 - 747 2e-11 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1562
Acc36I ACCTGC 1 cut(s) 1562
Acc65I GGTACC 1 cut(s) 1105
AccB1I GGYRCC 1 cut(s) 1105
AccBSI CCGCTC 1 cut(s) 1831
AccI GTMKAC 1 cut(s) 1734
AciI CCGC 1 cut(s) 1829
AclWI GGATC 2 cut(s) 47, 2106
AcoI YGGCCR 1 cut(s) 598
AcsI RAATTY 7 cut(s) 451, 625, 1639, 1786, 1896, 2327, 2353
AcuI CTGAAG 3 cut(s) 671, 1059, 1454
AfaI GTAC 7 cut(s) 222, 666, 749, 1093, 1107, 1190, 1428
AfiI CCNNNNNNNGG 5 cut(s) 153, 476, 568, 1102, 1682
AflIII ACRYGT 1 cut(s) 416
AjuI GAANNNNNNNTTGG 2 cut(s) 2189, 2221
AluBI AGCT 7 cut(s) 547, 724, 961, 1045, 1219, 1307, 1753
AluI AGCT 7 cut(s) 547, 724, 961, 1045, 1219, 1307, 1753
Alw26I GTCTC 4 cut(s) 504, 900, 1144, 2306
AlwI GGATC 2 cut(s) 47, 2106
Ama87I CYCGRG 1 cut(s) 1590
AoxI GGCC 4 cut(s) 144, 598, 615, 2358
ApeKI GCWGC 5 cut(s) 314, 558, 1181, 1764, 1885
ApoI RAATTY 7 cut(s) 451, 625, 1639, 1786, 1896, 2327, 2353
ArsI GACNNNNNNTTYG 4 cut(s) 482, 514, 1450, 1482
Asp700I GAANNNNTTC 2 cut(s) 732, 1052
Asp718I GGTACC 1 cut(s) 1105
AspLEI GCGC 5 cut(s) 314, 327, 862, 1885, 1930
AspS9I GGNCC 3 cut(s) 144, 376, 1911
AsuC2I CCSGG 1 cut(s) 1065
AsuHPI GGTGA 5 cut(s) 380, 1008, 1577, 1586, 2031
AvaI CYCGRG 1 cut(s) 1590
AvaII GGWCC 2 cut(s) 376, 1911
BanI GGYRCC 1 cut(s) 1105
BbsI GAAGAC 4 cut(s) 659, 920, 1460, 1467
BbvI GCAGC 5 cut(s) 326, 545, 1193, 1751, 1872
BccI CCATC 4 cut(s) 123, 1168, 1204, 1329
BceAI ACGGC 2 cut(s) 302, 602
BclI TGATCA 1 cut(s) 2251
BcnI CCSGG 1 cut(s) 1065
BcoDI GTCTC 4 cut(s) 504, 900, 1144, 2306
BfaI CTAG 7 cut(s) 161, 788, 1020, 1902, 1908, 2130, 2377
BfmI CTRYAG 1 cut(s) 1845
BfuAI ACCTGC 1 cut(s) 1562
BglII AGATCT 1 cut(s) 574
BisI GCNGC 5 cut(s) 315, 559, 1182, 1765, 1886
BlsI GCNGC 5 cut(s) 316, 560, 1183, 1766, 1887
BmcAI AGTACT 1 cut(s) 1190
Bme1390I CCNGG 1 cut(s) 1065
Bme18I GGWCC 2 cut(s) 376, 1911
BmeT110I CYCGRG 1 cut(s) 1590
BmgT120I GGNCC 3 cut(s) 144, 376, 1911
BmiI GGNNCC 3 cut(s) 182, 263, 1107
BmrFI CCNGG 1 cut(s) 1065
BmrI ACTGGG 2 cut(s) 994, 2017
BmsI GCATC 9 cut(s) 482, 1079, 1168, 1252, 1361, 1688, 1840, 1939, 2016
BmuI ACTGGG 2 cut(s) 994, 2017
BoxI GACNNNNGTC 1 cut(s) 892
BpiI GAAGAC 4 cut(s) 659, 920, 1460, 1467
BpuEI CTTGAG 4 cut(s) 479, 1115, 2015, 2135
BpuMI CCSGG 1 cut(s) 1065
BsaBI GATNNNNATC 4 cut(s) 288, 831, 1581, 1854
BsaJI CCNNGG 4 cut(s) 850, 1589, 1873, 2094
Bsc4I CCNNNNNNNGG 5 cut(s) 153, 476, 568, 1102, 1682
Bse118I RCCGGY 1 cut(s) 600
Bse1I ACTGG 4 cut(s) 879, 989, 1029, 2012
Bse3DI GCAATG 1 cut(s) 334
Bse8I GATNNNNATC 4 cut(s) 288, 831, 1581, 1854
BseDI CCNNGG 4 cut(s) 850, 1589, 1873, 2094
BseGI GGATG 4 cut(s) 72, 1183, 1278, 1726
BseJI GATNNNNATC 4 cut(s) 288, 831, 1581, 1854
BseLI CCNNNNNNNGG 5 cut(s) 153, 476, 568, 1102, 1682
BseMI GCAATG 1 cut(s) 334
BseMII CTCAG 6 cut(s) 398, 416, 569, 1021, 1383, 1599
BseNI ACTGG 4 cut(s) 879, 989, 1029, 2012
BseXI GCAGC 5 cut(s) 326, 545, 1193, 1751, 1872
BsgI GTGCAG 1 cut(s) 624
BshFI GGCC 4 cut(s) 146, 600, 617, 2360
BshNI GGYRCC 1 cut(s) 1105
BsiHKCI CYCGRG 1 cut(s) 1590
BsiSI CCGG 2 cut(s) 601, 1065
BslFI GGGAC 2 cut(s) 1047, 1690
BslI CCNNNNNNNGG 5 cut(s) 153, 476, 568, 1102, 1682
BsmAI GTCTC 4 cut(s) 504, 900, 1144, 2306
BsmFI GGGAC 2 cut(s) 1047, 1690
BsmI GAATGC 1 cut(s) 2081
BsnI GGCC 4 cut(s) 146, 600, 617, 2360
BsoBI CYCGRG 1 cut(s) 1590
BspACI CCGC 1 cut(s) 1829
BspANI GGCC 4 cut(s) 146, 600, 617, 2360
BspCNI CTCAG 6 cut(s) 397, 415, 570, 1020, 1384, 1600
BspLI GGNNCC 3 cut(s) 182, 263, 1107
BspMAI CTGCAG 1 cut(s) 1849
BspMI ACCTGC 1 cut(s) 1562
BspPI GGATC 2 cut(s) 47, 2106
BspT107I GGYRCC 1 cut(s) 1105
BsrBI CCGCTC 1 cut(s) 1831
BsrDI GCAATG 1 cut(s) 334
BsrFI RCCGGY 1 cut(s) 600
BsrI ACTGG 4 cut(s) 879, 989, 1029, 2012
BssAI RCCGGY 1 cut(s) 600
BssECI CCNNGG 4 cut(s) 850, 1589, 1873, 2094
Bst4CI ACNGT 5 cut(s) 634, 1138, 1431, 2121, 2142
Bst6I CTCTTC 2 cut(s) 230, 2265
BstC8I GCNNGC 2 cut(s) 963, 1890
BstDEI CTNAG 8 cut(s) 384, 402, 578, 1007, 1039, 1329, 1392, 1608
BstDSI CCRYGG 2 cut(s) 850, 1873
BstENI CCTNNNNNAGG 2 cut(s) 474, 1680
BstF5I GGATG 4 cut(s) 72, 1183, 1278, 1726
BstHHI GCGC 5 cut(s) 314, 327, 862, 1885, 1930
BstMAI GTCTC 4 cut(s) 504, 900, 1144, 2306
BstMWI GCNNNNNNNGC 4 cut(s) 866, 958, 1000, 1889
BstNSI RCATGY 1 cut(s) 420
BstPAI GACNNNNGTC 1 cut(s) 892
BstSCI CCNGG 1 cut(s) 1063
BstSFI CTRYAG 1 cut(s) 1845
BstV1I GCAGC 5 cut(s) 326, 545, 1193, 1751, 1872
BstV2I GAAGAC 4 cut(s) 659, 920, 1460, 1467
BstX2I RGATCY 1 cut(s) 574
BstYI RGATCY 1 cut(s) 574
BsuRI GGCC 4 cut(s) 146, 600, 617, 2360
BtgI CCRYGG 2 cut(s) 850, 1873
BtsCI GGATG 4 cut(s) 72, 1183, 1278, 1726
BtsIMutI CAGTG 4 cut(s) 49, 630, 886, 2306
BveI ACCTGC 1 cut(s) 1562
Cac8I GCNNGC 2 cut(s) 963, 1890
CfoI GCGC 5 cut(s) 314, 327, 862, 1885, 1930
Cfr10I RCCGGY 1 cut(s) 600
Cfr13I GGNCC 3 cut(s) 144, 376, 1911
CseI GACGC 3 cut(s) 685, 1132, 1687
Csp6I GTAC 7 cut(s) 221, 665, 748, 1092, 1106, 1189, 1427
CviAII CATG 8 cut(s) 417, 587, 596, 818, 1057, 1761, 1823, 1835
CviQI GTAC 7 cut(s) 221, 665, 748, 1092, 1106, 1189, 1427
DdeI CTNAG 8 cut(s) 384, 402, 578, 1007, 1039, 1329, 1392, 1608
DraI TTTAAA 1 cut(s) 1156
EaeI YGGCCR 1 cut(s) 598
Eam1104I CTCTTC 2 cut(s) 230, 2265
EarI CTCTTC 2 cut(s) 230, 2265
Eco47I GGWCC 2 cut(s) 376, 1911
Eco57I CTGAAG 3 cut(s) 671, 1059, 1454
Eco88I CYCGRG 1 cut(s) 1590
EcoNI CCTNNNNNAGG 2 cut(s) 474, 1680
EcoO109I RGGNCCY 1 cut(s) 1911
EcoRI GAATTC 1 cut(s) 1786
FaeI CATG 8 cut(s) 420, 590, 599, 821, 1060, 1764, 1826, 1838
FalI AAGNNNNNCTT 2 cut(s) 686, 718
FaqI GGGAC 2 cut(s) 1047, 1690
FatI CATG 8 cut(s) 416, 586, 595, 817, 1056, 1760, 1822, 1834
FauI CCCGC 1 cut(s) 1836
FbaI TGATCA 1 cut(s) 2251
FblI GTMKAC 1 cut(s) 1734
Fnu4HI GCNGC 5 cut(s) 315, 559, 1182, 1765, 1886
FokI GGATG 4 cut(s) 59, 1190, 1265, 1713
Fsp4HI GCNGC 5 cut(s) 315, 559, 1182, 1765, 1886
FspBI CTAG 7 cut(s) 161, 788, 1020, 1902, 1908, 2130, 2377
GlaI GCGC 5 cut(s) 313, 326, 861, 1884, 1929
GluI GCNGC 5 cut(s) 315, 559, 1182, 1765, 1886
HaeIII GGCC 4 cut(s) 146, 600, 617, 2360
HapII CCGG 2 cut(s) 601, 1065
HgaI GACGC 3 cut(s) 685, 1132, 1687
HhaI GCGC 5 cut(s) 314, 327, 862, 1885, 1930
Hin1II CATG 8 cut(s) 420, 590, 599, 821, 1060, 1764, 1826, 1838
Hin6I GCGC 5 cut(s) 312, 325, 860, 1883, 1928
HinP1I GCGC 5 cut(s) 312, 325, 860, 1883, 1928
HincII GTYRAC 3 cut(s) 529, 1122, 1735
HindII GTYRAC 3 cut(s) 529, 1122, 1735
HindIII AAGCTT 2 cut(s) 722, 1751
HpaI GTTAAC 1 cut(s) 529
HpaII CCGG 2 cut(s) 601, 1065
HphI GGTGA 5 cut(s) 380, 1008, 1577, 1586, 2031
Hpy166II GTNNAC 5 cut(s) 529, 1122, 1735, 2114, 2138
Hpy188III TCNNGA 9 cut(s) 161, 1009, 1132, 1367, 1439, 2032, 2048, 2152, 2176
Hpy8I GTNNAC 5 cut(s) 529, 1122, 1735, 2114, 2138
Hpy99I CGWCG 1 cut(s) 679
HpyAV CCTTC 1 cut(s) 762
HpyCH4III ACNGT 5 cut(s) 634, 1138, 1431, 2121, 2142
HpyCH4IV ACGT 1 cut(s) 667
HpyF10VI GCNNNNNNNGC 4 cut(s) 866, 958, 1000, 1889
HpyF3I CTNAG 8 cut(s) 384, 402, 578, 1007, 1039, 1329, 1392, 1608
HpySE526I ACGT 1 cut(s) 667
Hsp92II CATG 8 cut(s) 420, 590, 599, 821, 1060, 1764, 1826, 1838
HspAI GCGC 5 cut(s) 312, 325, 860, 1883, 1928
KpnI GGTACC 1 cut(s) 1109
Ksp22I TGATCA 1 cut(s) 2251
KspAI GTTAAC 1 cut(s) 529
LmnI GCTCC 5 cut(s) 267, 472, 958, 1067, 1836
Lsp1109I GCAGC 5 cut(s) 326, 545, 1193, 1751, 1872
LweI GCATC 9 cut(s) 482, 1079, 1168, 1252, 1361, 1688, 1840, 1939, 2016
MaeI CTAG 7 cut(s) 161, 788, 1020, 1902, 1908, 2130, 2377
MaeII ACGT 1 cut(s) 667
MaeIII GTNAC 8 cut(s) 68, 233, 796, 1274, 1439, 1807, 2142, 2274
MbiI CCGCTC 1 cut(s) 1831
MfeI CAATTG 3 cut(s) 973, 1996, 2255
MflI RGATCY 1 cut(s) 574
MlyI GAGTC 5 cut(s) 166, 230, 1403, 1436, 2119
MmeI TCCRAC 5 cut(s) 284, 650, 1407, 1490, 2187
MroXI GAANNNNTTC 2 cut(s) 732, 1052
MslI CAYNNNNRTG 2 cut(s) 478, 1684
MspI CCGG 2 cut(s) 601, 1065
MspR9I CCNGG 1 cut(s) 1065
MunI CAATTG 3 cut(s) 973, 1996, 2255
Mva1269I GAATGC 1 cut(s) 2081
MwoI GCNNNNNNNGC 4 cut(s) 866, 958, 1000, 1889
NciI CCSGG 1 cut(s) 1065
NlaIII CATG 8 cut(s) 420, 590, 599, 821, 1060, 1764, 1826, 1838
NlaIV GGNNCC 3 cut(s) 182, 263, 1107
NmuCI GTSAC 5 cut(s) 68, 233, 1274, 1439, 2142
NspI RCATGY 1 cut(s) 420
PaqCI CACCTGC 1 cut(s) 1562
PciI ACATGT 1 cut(s) 416
PctI GAATGC 1 cut(s) 2081
PdmI GAANNNNTTC 2 cut(s) 732, 1052
PfeI GAWTC 7 cut(s) 490, 1100, 1379, 1623, 1987, 2090, 2172
PfoI TCCNGGA 1 cut(s) 1063
PkrI GCNGC 5 cut(s) 316, 560, 1183, 1766, 1887
PleI GAGTC 5 cut(s) 165, 230, 1402, 1436, 2118
PpsI GAGTC 5 cut(s) 165, 230, 1402, 1436, 2118
PpuMI RGGWCCY 1 cut(s) 1911
PscI ACATGT 1 cut(s) 416
PshAI GACNNNNGTC 1 cut(s) 892
Psp5II RGGWCCY 1 cut(s) 1911
PspN4I GGNNCC 3 cut(s) 182, 263, 1107
PspPI GGNCC 3 cut(s) 144, 376, 1911
PspPPI RGGWCCY 1 cut(s) 1911
PstI CTGCAG 1 cut(s) 1849
PsuI RGATCY 1 cut(s) 574
RsaI GTAC 7 cut(s) 222, 666, 749, 1093, 1107, 1190, 1428
RsaNI GTAC 7 cut(s) 221, 665, 748, 1092, 1106, 1189, 1427
RseI CAYNNNNRTG 2 cut(s) 478, 1684
SalI GTCGAC 1 cut(s) 1733
SatI GCNGC 5 cut(s) 315, 559, 1182, 1765, 1886
Sau96I GGNCC 3 cut(s) 144, 376, 1911
ScaI AGTACT 1 cut(s) 1190
SchI GAGTC 5 cut(s) 166, 230, 1403, 1436, 2119
ScrFI CCNGG 1 cut(s) 1065
SfaNI GCATC 9 cut(s) 482, 1079, 1168, 1252, 1361, 1688, 1840, 1939, 2016
SfcI CTRYAG 1 cut(s) 1845
SinI GGWCC 2 cut(s) 376, 1911
SmiMI CAYNNNNRTG 2 cut(s) 478, 1684
SmlI CTYRAG 4 cut(s) 494, 1130, 2030, 2150
SmoI CTYRAG 4 cut(s) 494, 1130, 2030, 2150
SsiI CCGC 1 cut(s) 1829
SspMI CTAG 7 cut(s) 161, 788, 1020, 1902, 1908, 2130, 2377
StyD4I CCNGG 1 cut(s) 1063
TaaI ACNGT 5 cut(s) 634, 1138, 1431, 2121, 2142
TaiI ACGT 1 cut(s) 670
TaqI TCGA 3 cut(s) 203, 1368, 1734
TatI WGTACW 3 cut(s) 220, 1188, 1426
TfiI GAWTC 7 cut(s) 490, 1100, 1379, 1623, 1987, 2090, 2172
TscAI CASTG 4 cut(s) 49, 637, 886, 2306
TseFI GTSAC 5 cut(s) 68, 233, 1274, 1439, 2142
TseI GCWGC 5 cut(s) 314, 558, 1181, 1764, 1885
Tsp45I GTSAC 5 cut(s) 68, 233, 1274, 1439, 2142
TspGWI ACGGA 3 cut(s) 221, 839, 1862
TspRI CASTG 4 cut(s) 49, 637, 886, 2306
VpaK11BI GGWCC 2 cut(s) 376, 1911
XagI CCTNNNNNAGG 2 cut(s) 474, 1680
XapI RAATTY 7 cut(s) 451, 625, 1639, 1786, 1896, 2327, 2353
XbaI TCTAGA 1 cut(s) 160
XceI RCATGY 1 cut(s) 420
XmiI GTMKAC 1 cut(s) 1734
XmnI GAANNNNTTC 2 cut(s) 732, 1052
XspI CTAG 7 cut(s) 161, 788, 1020, 1902, 1908, 2130, 2377
ZrmI AGTACT 1 cut(s) 1190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.