Rh5DG202100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0000062
Physical Location & Seq
Forward (+)
22377868 .. 22380263
2396 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG202100.1

Sequence Viewer

Length: 1146 bp
ATGGTTGCAGAAACGAATTTTCCTGAGGGTATAAATGGTTCCGCAATCCAACAGTCGACTGAGGATTATGCAAAGTGTGCTGTCAGGACCAGTATTTTGTCTAAGAGATGGAAGAACATGTGGGCCTGTGCTCCCACTGTGAATTTGAACAGTCGAGATTTCTCCTCCTCTGCTGATTTCATAGCGTTTGCTGATCGTTTTCTTCTTCTTCGTGACTCATCAACCATTCAAAAGTGTAACGTGGTGGAGCTTGATCTTTGTGTCTATTCAGATGGAGTGTGTTTCCCAAGTCTCAAATTCTTCTACGTTACTGTCCCTACTGATAAAGACTCCATGGATTTTTCTCATTGCCCTGCGCTGGAACATTTAACTATAGATGGATATCATGGAGAGGATGGTGTTTATCTCAACATCTCTGTGTCTGAACTGAAGACGTTGAAGATAACTAGTACAGATATATACAGTGTTAACATCAATGCCCCAAAACTTGAAAAACTTGATCTCAAGGAGTCGGTTTTGTCAGATTATGACTTGGAGAATACAAAATCCCTAGTTGAAGCTAATATTTATCTCTATCACGAAGAGGAAGAAGGCGACGAAGAGGATGCTGCTGTCTGTGCAACTAATCTCTTGGAAGGAATTTCCGGTGTTAAATATCTGTTCCTTTCCTCTCGTATCTGTGAGAATTGTTCTGTGCCTGCTTTTGATAATTTGAGCAAATTGACGCTAGCTCTTCATAGCGGCTGTTATGGGTGGGGAATTCTAACGATGTTGTTGGAGAGAGCATCAAATCTAGAATGTCTTGTGTTGGAACATGACCATCATCATTATCCCGCCTATTGTGAGTCGGTGATTGAACTTGAAGATCCTATTGAAGTTCCCCCTGAAGTAGTTATATGGAGTCCACCAGAGTCTGTTCCTAAATGTGTGTCGTCACACCTCAAGAGTGTCTCCTTAAAGGGATTCCAGGGAAAGCATTTCTGGGGACATGTAGATGAAATGGAAGTGCTCAAGTATTTACTAGAGAATGGTCAAGTTTTGAAGGAGATGACTATTTACACTGAGTTTCTAGAACAGGAGTTGTACGGTGAACTTTCAAGGTTTGAATGGGGTTCAGAGACTTGTCAAGTTGAGATTATCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

381

Amino Acids

42.94

Weight (kDa)

4.59

Isoelectric Point (pI)

41.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At1g61320_AtMIF1 PF23622 94 - 323 3.3e-07 At1g61320/AtMIF1, LRR domain
FBD PF08387 303 - 352 7.5e-15 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 56
AciI CCGC 3 cut(s) 42, 741, 834
AclWI GGATC 1 cut(s) 860
AcsI RAATTY 5 cut(s) 16, 142, 296, 639, 759
AcuI CTGAAG 2 cut(s) 449, 906
AfaI GTAC 2 cut(s) 451, 1085
AfiI CCNNNNNNNGG 1 cut(s) 358
AflIII ACRYGT 2 cut(s) 117, 988
AhlI ACTAGT 1 cut(s) 446
AjnI CCWGG 1 cut(s) 966
AluBI AGCT 3 cut(s) 250, 560, 731
AluI AGCT 3 cut(s) 250, 560, 731
Alw21I GWGCWC 2 cut(s) 133, 1011
Alw26I GTCTC 3 cut(s) 296, 955, 1112
AlwI GGATC 1 cut(s) 860
AlwNI CAGNNNCTG 1 cut(s) 914
AoxI GGCC 1 cut(s) 123
ApeKI GCWGC 1 cut(s) 608
ApoI RAATTY 5 cut(s) 16, 142, 296, 639, 759
ArsI GACNNNNNNTTYG 2 cut(s) 79, 111
AspLEI GCGC 1 cut(s) 358
AspS9I GGNCC 2 cut(s) 87, 123
AsuHPI GGTGA 2 cut(s) 862, 1100
AsuNHI GCTAGC 1 cut(s) 727
AvaII GGWCC 1 cut(s) 87
AxyI CCTNAGG 1 cut(s) 24
BbsI GAAGAC 1 cut(s) 437
Bbv12I GWGCWC 2 cut(s) 133, 1011
BbvI GCAGC 1 cut(s) 595
BccI CCATC 5 cut(s) 102, 266, 371, 389, 828
BcgI CGANNNNNNTGC 2 cut(s) 587, 621
BciT130I CCWGG 1 cut(s) 968
BcoDI GTCTC 3 cut(s) 296, 955, 1112
BcuI ACTAGT 1 cut(s) 446
BfaI CTAG 6 cut(s) 447, 551, 728, 794, 1022, 1070
BfmI CTRYAG 1 cut(s) 372
BisI GCNGC 2 cut(s) 609, 742
BlsI GCNGC 2 cut(s) 610, 743
Bme1390I CCNGG 1 cut(s) 968
Bme18I GGWCC 1 cut(s) 87
BmgT120I GGNCC 2 cut(s) 87, 123
BmiI GGNNCC 1 cut(s) 40
BmrFI CCNGG 1 cut(s) 968
BmsI GCATC 2 cut(s) 595, 794
BmtI GCTAGC 1 cut(s) 731
BpiI GAAGAC 1 cut(s) 437
BpuEI CTTGAG 3 cut(s) 488, 926, 995
BsaBI GATNNNNATC 1 cut(s) 381
BsaJI CCNNGG 2 cut(s) 333, 967
BsaWI WCCGGW 1 cut(s) 644
Bsc4I CCNNNNNNNGG 1 cut(s) 358
Bse1I ACTGG 1 cut(s) 90
Bse21I CCTNAGG 1 cut(s) 24
Bse3DI GCAATG 1 cut(s) 346
Bse8I GATNNNNATC 1 cut(s) 381
BseBI CCWGG 1 cut(s) 968
BseDI CCNNGG 2 cut(s) 333, 967
BseGI GGATG 2 cut(s) 400, 610
BseJI GATNNNNATC 1 cut(s) 381
BseLI CCNNNNNNNGG 1 cut(s) 358
BseMI GCAATG 1 cut(s) 346
BseMII CTCAG 3 cut(s) 15, 51, 1053
BseNI ACTGG 1 cut(s) 90
BseRI GAGGAG 2 cut(s) 154, 157
BseXI GCAGC 1 cut(s) 595
BshFI GGCC 1 cut(s) 125
BsiHKAI GWGCWC 2 cut(s) 133, 1011
BsiSI CCGG 1 cut(s) 645
BslFI GGGAC 2 cut(s) 299, 999
BslI CCNNNNNNNGG 1 cut(s) 358
BsmAI GTCTC 3 cut(s) 296, 955, 1112
BsmFI GGGAC 2 cut(s) 299, 999
BsnI GGCC 1 cut(s) 125
Bsp1286I GDGCHC 2 cut(s) 133, 1011
Bsp143I GATC 4 cut(s) 193, 253, 499, 865
Bsp19I CCATGG 1 cut(s) 333
BspACI CCGC 3 cut(s) 42, 741, 834
BspANI GGCC 1 cut(s) 125
BspCNI CTCAG 3 cut(s) 16, 52, 1054
BspLI GGNNCC 1 cut(s) 40
BspOI GCTAGC 1 cut(s) 731
BspPI GGATC 1 cut(s) 860
BspQI GCTCTTC 1 cut(s) 738
BsrDI GCAATG 1 cut(s) 346
BsrI ACTGG 1 cut(s) 90
BssECI CCNNGG 2 cut(s) 333, 967
BssMI GATC 4 cut(s) 193, 253, 499, 865
BssT1I CCWWGG 1 cut(s) 333
Bst2UI CCWGG 1 cut(s) 968
Bst4CI ACNGT 6 cut(s) 54, 139, 152, 313, 464, 1088
Bst6I CTCTTC 3 cut(s) 576, 594, 738
BstAPI GCANNNNNTGC 1 cut(s) 77
BstC8I GCNNGC 2 cut(s) 699, 729
BstDEI CTNAG 4 cut(s) 24, 60, 102, 1062
BstDSI CCRYGG 1 cut(s) 333
BstF5I GGATG 2 cut(s) 400, 610
BstHHI GCGC 1 cut(s) 358
BstKTI GATC 4 cut(s) 196, 256, 502, 868
BstMAI GTCTC 3 cut(s) 296, 955, 1112
BstMBI GATC 4 cut(s) 193, 253, 499, 865
BstMWI GCNNNNNNNGC 2 cut(s) 77, 617
BstNI CCWGG 1 cut(s) 968
BstNSI RCATGY 2 cut(s) 121, 992
BstSCI CCNGG 1 cut(s) 966
BstSFI CTRYAG 1 cut(s) 372
BstV1I GCAGC 1 cut(s) 595
BstV2I GAAGAC 1 cut(s) 437
BstX2I RGATCY 1 cut(s) 865
BstYI RGATCY 1 cut(s) 865
Bsu36I CCTNAGG 1 cut(s) 24
BsuRI GGCC 1 cut(s) 125
BtgI CCRYGG 1 cut(s) 333
BtsCI GGATG 2 cut(s) 400, 610
BtsIMutI CAGTG 3 cut(s) 135, 469, 1059
Cac8I GCNNGC 2 cut(s) 699, 729
CaiI CAGNNNCTG 1 cut(s) 914
CfoI GCGC 1 cut(s) 358
Cfr13I GGNCC 2 cut(s) 87, 123
CseI GACGC 1 cut(s) 733
Csp6I GTAC 2 cut(s) 450, 1084
CviAII CATG 5 cut(s) 118, 334, 386, 815, 989
CviJI RGCY 5 cut(s) 125, 250, 560, 731, 744
CviKI_1 RGCY 5 cut(s) 125, 250, 560, 731, 744
CviQI GTAC 2 cut(s) 450, 1084
DdeI CTNAG 4 cut(s) 24, 60, 102, 1062
DpnI GATC 4 cut(s) 195, 255, 501, 867
DpnII GATC 4 cut(s) 193, 253, 499, 865
Eam1104I CTCTTC 3 cut(s) 576, 594, 738
EarI CTCTTC 3 cut(s) 576, 594, 738
Eco130I CCWWGG 1 cut(s) 333
Eco32I GATATC 1 cut(s) 383
Eco47I GGWCC 1 cut(s) 87
Eco57I CTGAAG 2 cut(s) 449, 906
Eco81I CCTNAGG 1 cut(s) 24
EcoRI GAATTC 1 cut(s) 759
EcoRII CCWGG 1 cut(s) 966
EcoRV GATATC 1 cut(s) 383
EcoT14I CCWWGG 1 cut(s) 333
ErhI CCWWGG 1 cut(s) 333
FaeI CATG 5 cut(s) 121, 337, 389, 818, 992
FaqI GGGAC 2 cut(s) 299, 999
FatI CATG 5 cut(s) 117, 333, 385, 814, 988
FauI CCCGC 1 cut(s) 841
FblI GTMKAC 1 cut(s) 56
Fnu4HI GCNGC 2 cut(s) 609, 742
FokI GGATG 2 cut(s) 407, 617
Fsp4HI GCNGC 2 cut(s) 609, 742
FspBI CTAG 6 cut(s) 447, 551, 728, 794, 1022, 1070
GlaI GCGC 1 cut(s) 357
GluI GCNGC 2 cut(s) 609, 742
HaeIII GGCC 1 cut(s) 125
HapII CCGG 1 cut(s) 645
HgaI GACGC 1 cut(s) 733
HhaI GCGC 1 cut(s) 358
Hin1II CATG 5 cut(s) 121, 337, 389, 818, 992
Hin6I GCGC 1 cut(s) 356
HinP1I GCGC 1 cut(s) 356
HincII GTYRAC 2 cut(s) 57, 469
HindII GTYRAC 2 cut(s) 57, 469
HinfI GANTC 7 cut(s) 215, 329, 509, 845, 901, 911, 963
HpaI GTTAAC 1 cut(s) 469
HpaII CCGG 1 cut(s) 645
HphI GGTGA 2 cut(s) 862, 1100
Hpy166II GTNNAC 4 cut(s) 57, 469, 905, 1091
Hpy188I TCNGA 4 cut(s) 271, 424, 523, 1117
Hpy188III TCNNGA 8 cut(s) 23, 85, 155, 212, 578, 794, 943, 1070
Hpy8I GTNNAC 4 cut(s) 57, 469, 905, 1091
Hpy99I CGWCG 1 cut(s) 599
HpyAV CCTTC 3 cut(s) 584, 629, 1036
HpyCH4III ACNGT 6 cut(s) 54, 139, 152, 313, 464, 1088
HpyCH4IV ACGT 3 cut(s) 240, 306, 434
HpyCH4V TGCA 3 cut(s) 8, 71, 620
HpyF10VI GCNNNNNNNGC 2 cut(s) 77, 617
HpyF3I CTNAG 4 cut(s) 24, 60, 102, 1062
HpySE526I ACGT 3 cut(s) 240, 306, 434
Hsp92II CATG 5 cut(s) 121, 337, 389, 818, 992
HspAI GCGC 1 cut(s) 356
KspAI GTTAAC 1 cut(s) 469
Kzo9I GATC 4 cut(s) 193, 253, 499, 865
LguI GCTCTTC 1 cut(s) 738
LmnI GCTCC 2 cut(s) 136, 247
Lsp1109I GCAGC 1 cut(s) 595
LweI GCATC 2 cut(s) 595, 794
MaeI CTAG 6 cut(s) 447, 551, 728, 794, 1022, 1070
MaeII ACGT 3 cut(s) 240, 306, 434
MaeIII GTNAC 4 cut(s) 212, 236, 307, 933
MalI GATC 4 cut(s) 195, 255, 501, 867
MboI GATC 4 cut(s) 193, 253, 499, 865
MflI RGATCY 1 cut(s) 865
MhlI GDGCHC 2 cut(s) 133, 1011
MluCI AATT 8 cut(s) 16, 142, 296, 639, 685, 709, 719, 759
MlyI GAGTC 6 cut(s) 209, 323, 518, 854, 910, 920
MmeI TCCRAC 3 cut(s) 73, 756, 789
MnlI CCTC 9 cut(s) 19, 55, 175, 178, 385, 577, 595, 679, 950
MseI TTAA 4 cut(s) 368, 468, 651, 956
MslI CAYNNNNRTG 2 cut(s) 416, 993
MspI CCGG 1 cut(s) 645
MspR9I CCNGG 1 cut(s) 968
MvaI CCWGG 1 cut(s) 968
MwoI GCNNNNNNNGC 2 cut(s) 77, 617
NcoI CCATGG 1 cut(s) 333
NdeII GATC 4 cut(s) 193, 253, 499, 865
NheI GCTAGC 1 cut(s) 727
NlaIII CATG 5 cut(s) 121, 337, 389, 818, 992
NlaIV GGNNCC 1 cut(s) 40
NmuCI GTSAC 2 cut(s) 212, 933
NspI RCATGY 2 cut(s) 121, 992
PciI ACATGT 2 cut(s) 117, 988
PciSI GCTCTTC 1 cut(s) 738
PfeI GAWTC 1 cut(s) 963
PkrI GCNGC 2 cut(s) 610, 743
PleI GAGTC 6 cut(s) 209, 323, 517, 853, 909, 919
PpsI GAGTC 6 cut(s) 209, 323, 517, 853, 909, 919
PscI ACATGT 2 cut(s) 117, 988
Psp6I CCWGG 1 cut(s) 966
PspGI CCWGG 1 cut(s) 966
PspN4I GGNNCC 1 cut(s) 40
PspPI GGNCC 2 cut(s) 87, 123
PsrI GAACNNNNNNTAC 2 cut(s) 22, 54
PstNI CAGNNNCTG 1 cut(s) 914
PsuI RGATCY 1 cut(s) 865
RsaI GTAC 2 cut(s) 451, 1085
RsaNI GTAC 2 cut(s) 450, 1084
RseI CAYNNNNRTG 2 cut(s) 416, 993
SalI GTCGAC 1 cut(s) 55
SapI GCTCTTC 1 cut(s) 738
SaqAI TTAA 4 cut(s) 368, 468, 651, 956
SatI GCNGC 2 cut(s) 609, 742
Sau3AI GATC 4 cut(s) 193, 253, 499, 865
Sau96I GGNCC 2 cut(s) 87, 123
SchI GAGTC 6 cut(s) 209, 323, 518, 854, 910, 920
ScrFI CCNGG 1 cut(s) 968
SduI GDGCHC 2 cut(s) 133, 1011
SetI ASST 8 cut(s) 243, 252, 309, 437, 562, 733, 942, 1103
SfaNI GCATC 2 cut(s) 595, 794
SfcI CTRYAG 1 cut(s) 372
SinI GGWCC 1 cut(s) 87
SmiMI CAYNNNNRTG 2 cut(s) 416, 993
SmlI CTYRAG 3 cut(s) 503, 941, 1010
SmoI CTYRAG 3 cut(s) 503, 941, 1010
SpeI ACTAGT 1 cut(s) 446
Sse9I AATT 8 cut(s) 16, 142, 296, 639, 685, 709, 719, 759
SsiI CCGC 3 cut(s) 42, 741, 834
SspI AATATT 1 cut(s) 565
SspMI CTAG 6 cut(s) 447, 551, 728, 794, 1022, 1070
StyD4I CCNGG 1 cut(s) 966
StyI CCWWGG 1 cut(s) 333
TaaI ACNGT 6 cut(s) 54, 139, 152, 313, 464, 1088
TaiI ACGT 3 cut(s) 243, 309, 437
TaqI TCGA 2 cut(s) 56, 154
TasI AATT 8 cut(s) 16, 142, 296, 639, 685, 709, 719, 759
TatI WGTACW 1 cut(s) 449
TauI GCSGC 1 cut(s) 744
TfiI GAWTC 1 cut(s) 963
Tru1I TTAA 4 cut(s) 368, 468, 651, 956
Tru9I TTAA 4 cut(s) 368, 468, 651, 956
TscAI CASTG 3 cut(s) 142, 469, 1066
TseFI GTSAC 2 cut(s) 212, 933
TseI GCWGC 1 cut(s) 608
Tsp45I GTSAC 2 cut(s) 212, 933
TspDTI ATGAA 3 cut(s) 169, 725, 1011
TspRI CASTG 3 cut(s) 142, 469, 1066
VpaK11BI GGWCC 1 cut(s) 87
XapI RAATTY 5 cut(s) 16, 142, 296, 639, 759
XbaI TCTAGA 2 cut(s) 793, 1069
XceI RCATGY 2 cut(s) 121, 992
XmiI GTMKAC 1 cut(s) 56
XspI CTAG 6 cut(s) 447, 551, 728, 794, 1022, 1070
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.