AT1G78750

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000062
Physical Location & Seq
Reverse (-)
29612904 .. 29614884
1981 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G78750.2

Sequence Viewer

Length: 1377 bp
ATGGATGGAGCCGGTGAGAAACGTGTTCGTGCCAAAGGCTCGCGTGAAGTTGACTGGATAAGCAACTTGCCAGAAACATTGCTATGTCAGGTACTCTTCTATCTTCCCACGAAAGATGTAGTTAAGAGTAGCGTGTTATCTAGTAGATGGAGAAATCTCTGGAAGTATGTACCTGGATTCAACTTGAGTTATTGTGATTTCCATGTCCGCAACACATTCTCGTATGACCACAACACATTCTTGCGTTTTGTCGACAGCTTTATGGGTTTCAACAGTCAATCTTGCTTACAAAGTTTTAGGTTAGAGTACGATTCTAGTGGGTATGGTGAGCCTAAACTGGCTCTGATCAGGCGGTGGATCAACAGTGTTGTTAGTCGGAAAGTGAAATATCTCGGTGTTTTGGATGATTCATGTGATAATTATGAGTTCGAGATGCCTCCAACCCTTTACACTTGTGAGACCTTAGTATACTTAACGCTCGATGGACTATCCTTGGCTAGTCCCAAGTTTGTTTCTTTACCTTCTCTTAAAGAACTCCATCTAAGTATAGTTAAGTTTGCCGACCATATGGCGTTGGAAACACTCATCTCACAGTGCCCAGTTCTAGAAAACCTAAATATCAACAGGAGTTTCTGTGATGATTTTGAATTTACATGTGTGCGTTCTCAGTCACTATTGAGCTTCACTCATGTTGCGGACACTGATGAAATGTTGAATGAAGATCTAGTAGTCGCAATTGATGCCCCCAAGCTTAAGTATCTGAGGCTCAGTGATCATCGTATTGCAAGTTTTATACTAAATGATCTGGCTTCCCTTGTTGAAGCTGATATCGATACTGTCTTTAACTTGATTTGCAAGAAGATGTTCAATCCAAATGATCTGAATAAAAGAAATATGATTCGTGATTTTCTCGTCGGGATCTCTAGCATAAAAACTTTGATCATCGCTTCAAGTACTCTTGAGGTCATTTATGATTACTCAAGATGTGAGCCACTACCCTTATTCCGTAACCTATCTTCCTTGCGTGTTGACTTCTACGGCTACAAGTGGGAAATGTTGCCAATCTTTCTTGAAAGCTGCCCTAATCTAAAATCTCTTGTCGTGGGATCTGCTAATTATCGGGAGAAGGAGGGAATTAATATCTTGTCTGTACCTCGGGGTTTCCTATCGTCTCTCGAGTATGTTAAGATAGAAAGGCCATTGAAAGGAGAGGCGATGGAGATGAAACTAGTGAGTTACTTACTTGAGAATTCAACAATCCTCAAGAAACTGACCCTATGCTTGGATGATTCCATAAAGAAAGAAGAATCTGTCATCCTAAAAGAACTCAATACTATTCCAAGACTCTCTAGCGCATGCCAAGTTGTCATTCTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD LRR_2

Protein Analysis

458

Amino Acids

52.43

Weight (kDa)

5.84

Isoelectric Point (pI)

46.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 20 - 58 6.6e-09 F-box domain
LRR_At5g56370 PF24758 117 - 258 1.3e-15 FBD-associated F-box protein At5g56370, LRR repeats
LRR_2 PF07723 175 - 200 1.4e-07 Leucine Rich Repeat
FBD PF08387 383 - 426 6.7e-14 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000062)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G13780 AT1G13780 AT1G16930 AT1G16930 AT1G16930 AT1G16940 AT1G16945 AT1G51370 AT1G51370 AT1G51370 AT1G60400 AT1G60410 AT1G66290 AT1G66300 AT1G66300 AT1G66310 AT1G66320 AT1G66640 AT1G69630 AT1G78730 AT1G78740 AT1G78750 AT1G78750 AT1G78760 AT1G78840 AT1G78840 AT1G80470 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G26030 AT2G27505 AT3G19085 AT3G19085 AT3G23955 AT3G23955 AT4G13985 AT5G18770 AT5G18770 AT5G18780 AT5G18780 AT5G18780 AT5G18780 AT5G22590 AT5G22600 AT5G22600 AT5G22610 AT5G22610 AT5G22660 AT5G22660 AT5G22670 AT5G22680 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22700 AT5G22720 AT5G22730 AT5G22730 AT5G22730 AT5G25850 AT5G27750 AT5G27750 AT5G44490 AT5G44490 AT5G44940 AT5G44950 AT5G44960 AT5G44970 AT5G44980 AT5G44980 AT5G44980 AT5G44980 AT5G53592 AT5G53635 AT5G53637 AT5G53640 AT5G53840
fragaria_vesca FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g00860 FvH4_1g01470 FvH4_1g01500 FvH4_1g06320 FvH4_1g06320 FvH4_1g09701 FvH4_1g09890 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_2g40800 FvH4_3g17060 FvH4_3g17061 FvH4_3g17061 FvH4_3g17061 FvH4_3g17080 FvH4_3g17080 FvH4_3g17080 FvH4_3g17090 FvH4_3g17100 FvH4_3g17110 FvH4_3g17130 FvH4_3g17160 FvH4_3g17160 FvH4_3g17161 FvH4_3g17190 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g18021 FvH4_3g21162 FvH4_3g21162 FvH4_3g21190 FvH4_4g14821 FvH4_4g14841 FvH4_4g14850 FvH4_5g35600 FvH4_6g23651 FvH4_6g38031
malus_domestica MD03G1246000.v1.1 MD03G1252900.v1.1 MD03G1253200.v1.1 MD03G1253500.v1.1 MD03G1253700.v1.1 MD08G1193400.v1.1 MD11G1256200.v1.1 MD11G1265900.v1.1 MD11G1266000.v1.1 MD11G1266700.v1.1 MD11G1266800.v1.1 MD11G1266900.v1.1 MD11G1267000.v1.1 MD11G1274900.v1.1 MD11G1275300.v1.1
prunus_persica Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158700_v2.0.a1 Prupe.4G158800_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G158900_v2.0.a1 Prupe.4G159000_v2.0.a1
pyrus_communis pycom03g19500 pycom03g20040 pycom03g20080 pycom03g20130 pycom03g20140 pycom08g16650 pycom11g22660 pycom11g23380 pycom11g23390 pycom11g23450 pycom11g23470 pycom11g23480 pycom11g23490 pycom11g24250
rosa_chinensis RchiOBHm_Chr1g0321381 RchiOBHm_Chr4g0417361 RchiOBHm_Chr4g0417391 RchiOBHm_Chr4g0417401 RchiOBHm_Chr4g0417411 RchiOBHm_Chr4g0417471 RchiOBHm_Chr5g0028391 RchiOBHm_Chr5g0028401 RchiOBHm_Chr5g0028441 RchiOBHm_Chr5g0028451 RchiOBHm_Chr5g0028461 RchiOBHm_Chr5g0028471 RchiOBHm_Chr5g0028481 RchiOBHm_Chr5g0028491 RchiOBHm_Chr5g0028501 RchiOBHm_Chr5g0028511 RchiOBHm_Chr5g0028521 RchiOBHm_Chr5g0028541 RchiOBHm_Chr5g0028551 RchiOBHm_Chr5g0028581 RchiOBHm_Chr5g0040081 RchiOBHm_Chr7g0192741 RchiOBHm_Chr7g0237071
rosa_laevigata RLG00000007914 RLG00000033090 RLG00000033092 RLG00000033096 RLG00000033097 RLG00000033098 RLG00000033099 RLG00000033100
rosa_multiflora Rmu_sc0000103.1_g000060 Rmu_sc0000272.1_g000005 Rmu_sc0000272.1_g000006 Rmu_sc0001134.1_g000002 Rmu_sc0001561.1_g000020 Rmu_sc0001561.1_g000021 Rmu_sc0001575.1_g000002 Rmu_sc0001575.1_g000007 Rmu_sc0001575.1_g000008 Rmu_sc0001575.1_g000010 Rmu_sc0001575.1_g000013 Rmu_sc0002131.1_g000038 Rmu_sc0004142.1_g000020 Rmu_sc0004142.1_g000021 Rmu_sc0004142.1_g000026 Rmu_sc0004142.1_g000027 Rmu_sc0004142.1_g000028 Rmu_sc0005594.1_g000010 Rmu_sc0006771.1_g000001 Rmu_sc0006771.1_g000002 Rmu_sc0006771.1_g000003 Rmu_sc0006771.1_g000004 Rmu_sc0006771.1_g000007 Rmu_sc0008526.1_g000014 Rmu_sc0009797.1_g000001
rosa_roxburghii Rroxscaffold_1G00041210 Rroxscaffold_1G00051210 Rroxscaffold_1G00051220 Rroxscaffold_1G00051230 Rroxscaffold_1G00051240 Rroxscaffold_1G00051280 Rroxscaffold_1G00051310 Rroxscaffold_3G00224520 Rroxscaffold_3G00224530 Rroxscaffold_5G00361120 Rroxscaffold_6G00412010
rosa_rugosa Rorug04G0147300 Rorug04G0147400 Rorug04G0147500 Rorug04G0147700 Rorug04G0147800 Rorug05G0107100 Rorug05G0107300 Rorug05G0107600 Rorug05G0107600 Rorug05G0107700 Rorug05G0107800 Rorug05G0107900 Rorug05G0108000 Rorug05G0108100 Rorug05G0108200 Rorug05G0108400 Rorug05G0108500 Rorug05G0108600 Rorug05G0108700 Rorug05G0108900 Rorug05G0109000 Rorug05G0109100 Rorug05G0109300 Rorug05G0109400 Rorug05G0109500 Rorug05G0183200 Rorug05G0183300 Rorug05G0183400 Rorug07G0187200 Rorug07G0301700 Rorug07G0301700 Rorug07G0301800
rosa_samantha Rh1AG413100 Rh1CG047800 Rh4AG210900 Rh4AG211000 Rh4AG211100 Rh4BG141000 Rh4BG211300 Rh4CG221700 Rh4CG221800 Rh4CG221900 Rh4DG208700 Rh4DG208800 Rh4DG208900 Rh5AG199800 Rh5AG200100 Rh5AG200200 Rh5AG200500 Rh5AG200600 Rh5AG200700 Rh5AG200800 Rh5AG200900 Rh5AG201000 Rh5AG201100 Rh5AG201300 Rh5AG201400 Rh5AG269900 Rh5BG198300 Rh5BG198500 Rh5BG198900 Rh5BG199000 Rh5BG199400 Rh5BG199500 Rh5BG199600 Rh5BG199700 Rh5BG199800 Rh5BG273400 Rh5CG218400 Rh5CG219200 Rh5CG219300 Rh5CG219400 Rh5CG219500 Rh5CG219700 Rh5CG219800 Rh5CG306300 Rh5CG306400 Rh5DG200300 Rh5DG200500 Rh5DG200600 Rh5DG201100 Rh5DG201200 Rh5DG201300 Rh5DG201400 Rh5DG201500 Rh5DG201600 Rh5DG201700 Rh5DG201800 Rh5DG201900 Rh5DG202100 Rh5DG202400 Rh5DG202500 Rh5DG203100 Rh5DG281500 Rh7AG457900 Rh7BG320900 Rh7BG428600 Rh7CG476000 Rh7DG445100 Rh7DG445200
rosa_wichuraiana Rw0G014200 Rw0G014210 Rw1G003950 Rw4G017810 Rw4G017820 Rw4G017850 Rw5G018220 Rw5G018230 Rw5G018250 Rw5G018260 Rw5G018270 Rw5G018280 Rw5G025230 Rw7G037950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 252, 468
AccII CGCG 1 cut(s) 43
AciI CCGC 3 cut(s) 208, 352, 695
AclWI GGATC 3 cut(s) 365, 926, 1114
AcsI RAATTY 2 cut(s) 647, 1249
AfaI GTAC 5 cut(s) 93, 171, 308, 955, 1152
AfiI CCNNNNNNNGG 2 cut(s) 1205, 1282
AflII CTTAAG 1 cut(s) 752
AflIII ACRYGT 2 cut(s) 22, 653
AhlI ACTAGT 1 cut(s) 1228
AjnI CCWGG 1 cut(s) 172
AjuI GAANNNNNNNTTGG 1 cut(s) 1353
AluBI AGCT 5 cut(s) 258, 681, 751, 824, 1077
AluI AGCT 5 cut(s) 258, 681, 751, 824, 1077
Alw26I GTCTC 2 cut(s) 452, 1176
AlwI GGATC 3 cut(s) 365, 926, 1114
Ama87I CYCGRG 2 cut(s) 1155, 1175
AoxI GGCC 1 cut(s) 1196
ApeKI GCWGC 1 cut(s) 1077
ApoI RAATTY 2 cut(s) 647, 1249
AseI ATTAAT 1 cut(s) 1137
Asp700I GAANNNNTTC 1 cut(s) 863
AspLEI GCGC 1 cut(s) 1355
AsuHPI GGTGA 2 cut(s) 26, 338
AvaI CYCGRG 2 cut(s) 1155, 1175
BaeGI GKGCMC 1 cut(s) 599
BarI GAAGNNNNNNTAC 2 cut(s) 1000, 1032
BbvI GCAGC 1 cut(s) 1064
BccI CCATC 4 cut(s) 141, 476, 546, 1210
BceAI ACGGC 1 cut(s) 1054
BciT130I CCWGG 1 cut(s) 174
BclI TGATCA 3 cut(s) 345, 772, 939
BcoDI GTCTC 2 cut(s) 452, 1176
BcuI ACTAGT 1 cut(s) 1228
BfaI CTAG 8 cut(s) 141, 315, 498, 605, 725, 924, 1229, 1350
BfrI CTTAAG 1 cut(s) 752
BglII AGATCT 1 cut(s) 721
BisI GCNGC 1 cut(s) 1078
BlsI GCNGC 1 cut(s) 1079
BmcAI AGTACT 1 cut(s) 955
Bme1390I CCNGG 1 cut(s) 174
BmeT110I CYCGRG 2 cut(s) 1155, 1175
BmiI GGNNCC 1 cut(s) 10
BmrFI CCNGG 1 cut(s) 174
BmrI ACTGGG 1 cut(s) 593
BmsI GCATC 2 cut(s) 423, 730
BmuI ACTGGG 1 cut(s) 593
BplI GAGNNNNNCTC 2 cut(s) 670, 702
BpuEI CTTGAG 5 cut(s) 205, 964, 980, 1247, 1265
Bsa29I ATCGAT 1 cut(s) 831
BsaI GGTCTC 1 cut(s) 452
BsaJI CCNNGG 2 cut(s) 492, 1154
BsaXI ACNNNNNCTCC 2 cut(s) 619, 649
Bsc4I CCNNNNNNNGG 2 cut(s) 1205, 1282
Bse118I RCCGGY 1 cut(s) 11
Bse1I ACTGG 3 cut(s) 59, 342, 599
Bse3DI GCAATG 1 cut(s) 77
BseBI CCWGG 1 cut(s) 174
BseCI ATCGAT 1 cut(s) 831
BseDI CCNNGG 2 cut(s) 492, 1154
BseGI GGATG 4 cut(s) 10, 409, 1291, 1314
BseLI CCNNNNNNNGG 2 cut(s) 1205, 1282
BseMI GCAATG 1 cut(s) 77
BseMII CTCAG 3 cut(s) 680, 752, 781
BseNI ACTGG 3 cut(s) 59, 342, 599
BseSI GKGCMC 1 cut(s) 599
BseXI GCAGC 1 cut(s) 1064
Bsh1236I CGCG 1 cut(s) 43
BshFI GGCC 1 cut(s) 1198
BshVI ATCGAT 1 cut(s) 831
BsiHKCI CYCGRG 2 cut(s) 1155, 1175
BsiSI CCGG 1 cut(s) 12
BslFI GGGAC 1 cut(s) 486
BslI CCNNNNNNNGG 2 cut(s) 1205, 1282
BsmAI GTCTC 2 cut(s) 452, 1176
BsmBI CGTCTC 1 cut(s) 1176
BsmFI GGGAC 1 cut(s) 486
BsnI GGCC 1 cut(s) 1198
Bso31I GGTCTC 1 cut(s) 452
BsoBI CYCGRG 2 cut(s) 1155, 1175
Bsp1286I GDGCHC 1 cut(s) 599
Bsp143I GATC 9 cut(s) 345, 357, 721, 772, 802, 877, 918, 939, 1106
BspACI CCGC 3 cut(s) 208, 352, 695
BspANI GGCC 1 cut(s) 1198
BspCNI CTCAG 3 cut(s) 679, 753, 780
BspDI ATCGAT 1 cut(s) 831
BspFNI CGCG 1 cut(s) 43
BspLI GGNNCC 1 cut(s) 10
BspPI GGATC 3 cut(s) 365, 926, 1114
BspTI CTTAAG 1 cut(s) 752
BspTNI GGTCTC 1 cut(s) 452
BsrDI GCAATG 1 cut(s) 77
BsrFI RCCGGY 1 cut(s) 11
BsrI ACTGG 3 cut(s) 59, 342, 599
BssAI RCCGGY 1 cut(s) 11
BssECI CCNNGG 2 cut(s) 492, 1154
BssMI GATC 9 cut(s) 345, 357, 721, 772, 802, 877, 918, 939, 1106
BssNAI GTATAC 1 cut(s) 469
BssT1I CCWWGG 1 cut(s) 492
Bst1107I GTATAC 1 cut(s) 469
Bst2UI CCWGG 1 cut(s) 174
Bst4CI ACNGT 4 cut(s) 275, 365, 594, 838
Bst6I CTCTTC 1 cut(s) 101
BstAFI CTTAAG 1 cut(s) 752
BstAPI GCANNNNNTGC 1 cut(s) 740
BstC8I GCNNGC 2 cut(s) 41, 1357
BstDEI CTNAG 5 cut(s) 463, 542, 666, 761, 767
BstF5I GGATG 4 cut(s) 10, 409, 1291, 1314
BstFNI CGCG 1 cut(s) 43
BstHHI GCGC 1 cut(s) 1355
BstKTI GATC 9 cut(s) 348, 360, 724, 775, 805, 880, 921, 942, 1109
BstMAI GTCTC 2 cut(s) 452, 1176
BstMBI GATC 9 cut(s) 345, 357, 721, 772, 802, 877, 918, 939, 1106
BstMWI GCNNNNNNNGC 1 cut(s) 740
BstNI CCWGG 1 cut(s) 174
BstNSI RCATGY 2 cut(s) 657, 1359
BstSCI CCNGG 1 cut(s) 172
BstSLI GKGCMC 1 cut(s) 599
BstUI CGCG 1 cut(s) 43
BstV1I GCAGC 1 cut(s) 1064
BstX2I RGATCY 3 cut(s) 721, 918, 1106
BstYI RGATCY 3 cut(s) 721, 918, 1106
BstZ17I GTATAC 1 cut(s) 469
Bsu15I ATCGAT 1 cut(s) 831
BsuRI GGCC 1 cut(s) 1198
BsuTUI ATCGAT 1 cut(s) 831
BtgZI GCGATG 2 cut(s) 928, 1229
BtsCI GGATG 4 cut(s) 10, 409, 1291, 1314
BtsIMutI CAGTG 4 cut(s) 370, 599, 699, 775
Cac8I GCNNGC 2 cut(s) 41, 1357
CfoI GCGC 1 cut(s) 1355
Cfr10I RCCGGY 1 cut(s) 11
ClaI ATCGAT 1 cut(s) 831
Csp6I GTAC 5 cut(s) 92, 170, 307, 954, 1151
CviAII CATG 5 cut(s) 203, 411, 654, 689, 1356
CviQI GTAC 5 cut(s) 92, 170, 307, 954, 1151
DdeI CTNAG 5 cut(s) 463, 542, 666, 761, 767
DpnI GATC 9 cut(s) 347, 359, 723, 774, 804, 879, 920, 941, 1108
DpnII GATC 9 cut(s) 345, 357, 721, 772, 802, 877, 918, 939, 1106
Eam1104I CTCTTC 1 cut(s) 101
EarI CTCTTC 1 cut(s) 101
Eco130I CCWWGG 1 cut(s) 492
Eco31I GGTCTC 1 cut(s) 452
Eco32I GATATC 1 cut(s) 829
Eco88I CYCGRG 2 cut(s) 1155, 1175
EcoRI GAATTC 1 cut(s) 1249
EcoRII CCWGG 1 cut(s) 172
EcoRV GATATC 1 cut(s) 829
EcoT14I CCWWGG 1 cut(s) 492
ErhI CCWWGG 1 cut(s) 492
Esp3I CGTCTC 1 cut(s) 1176
FaeI CATG 5 cut(s) 206, 414, 657, 692, 1359
FaqI GGGAC 1 cut(s) 486
FatI CATG 5 cut(s) 202, 410, 653, 688, 1355
FauNDI CATATG 1 cut(s) 567
FbaI TGATCA 3 cut(s) 345, 772, 939
FblI GTMKAC 2 cut(s) 252, 468
Fnu4HI GCNGC 1 cut(s) 1078
FokI GGATG 4 cut(s) 17, 416, 1298, 1301
Fsp4HI GCNGC 1 cut(s) 1078
FspBI CTAG 8 cut(s) 141, 315, 498, 605, 725, 924, 1229, 1350
GlaI GCGC 1 cut(s) 1354
GluI GCNGC 1 cut(s) 1078
HaeIII GGCC 1 cut(s) 1198
HapII CCGG 1 cut(s) 12
HhaI GCGC 1 cut(s) 1355
Hin1II CATG 5 cut(s) 206, 414, 657, 692, 1359
Hin6I GCGC 1 cut(s) 1353
HinP1I GCGC 1 cut(s) 1353
HincII GTYRAC 3 cut(s) 52, 253, 1030
HindII GTYRAC 3 cut(s) 52, 253, 1030
HindIII AAGCTT 1 cut(s) 749
HinfI GANTC 7 cut(s) 177, 311, 407, 898, 1289, 1307, 1344
HpaII CCGG 1 cut(s) 12
HphI GGTGA 2 cut(s) 26, 338
Hpy166II GTNNAC 4 cut(s) 52, 253, 469, 1030
Hpy188I TCNGA 5 cut(s) 345, 378, 762, 882, 1376
Hpy8I GTNNAC 4 cut(s) 52, 253, 469, 1030
Hpy99I CGWCG 1 cut(s) 917
HpyAV CCTTC 2 cut(s) 531, 1120
HpyCH4III ACNGT 4 cut(s) 275, 365, 594, 838
HpyCH4IV ACGT 1 cut(s) 22
HpyCH4V TGCA 2 cut(s) 785, 855
HpyF10VI GCNNNNNNNGC 1 cut(s) 740
HpyF3I CTNAG 5 cut(s) 463, 542, 666, 761, 767
HpySE526I ACGT 1 cut(s) 22
Hsp92II CATG 5 cut(s) 206, 414, 657, 692, 1359
HspAI GCGC 1 cut(s) 1353
Ksp22I TGATCA 3 cut(s) 345, 772, 939
Kzo9I GATC 9 cut(s) 345, 357, 721, 772, 802, 877, 918, 939, 1106
LmnI GCTCC 1 cut(s) 8
Lsp1109I GCAGC 1 cut(s) 1064
LweI GCATC 2 cut(s) 423, 730
MaeI CTAG 8 cut(s) 141, 315, 498, 605, 725, 924, 1229, 1350
MaeII ACGT 1 cut(s) 22
MaeIII GTNAC 3 cut(s) 669, 1007, 1235
MalI GATC 9 cut(s) 347, 359, 723, 774, 804, 879, 920, 941, 1108
MboI GATC 9 cut(s) 345, 357, 721, 772, 802, 877, 918, 939, 1106
MboII GAAGA 6 cut(s) 88, 95, 731, 871, 1008, 1316
MfeI CAATTG 1 cut(s) 735
MflI RGATCY 3 cut(s) 721, 918, 1106
MhlI GDGCHC 1 cut(s) 599
MluCI AATT 6 cut(s) 418, 647, 735, 1114, 1134, 1249
MlyI GAGTC 1 cut(s) 1338
MmeI TCCRAC 3 cut(s) 356, 464, 555
MnlI CCTC 7 cut(s) 447, 756, 955, 1123, 1164, 1204, 1271
MroXI GAANNNNTTC 1 cut(s) 863
MseI TTAA 8 cut(s) 123, 473, 528, 552, 753, 843, 1137, 1185
MslI CAYNNNNRTG 1 cut(s) 82
MspCI CTTAAG 1 cut(s) 752
MspI CCGG 1 cut(s) 12
MspR9I CCNGG 1 cut(s) 174
MunI CAATTG 1 cut(s) 735
MvaI CCWGG 1 cut(s) 174
MvnI CGCG 1 cut(s) 43
MwoI GCNNNNNNNGC 1 cut(s) 740
NdeI CATATG 1 cut(s) 567
NdeII GATC 9 cut(s) 345, 357, 721, 772, 802, 877, 918, 939, 1106
NlaIII CATG 5 cut(s) 206, 414, 657, 692, 1359
NlaIV GGNNCC 1 cut(s) 10
NmuCI GTSAC 1 cut(s) 669
NspI RCATGY 2 cut(s) 657, 1359
PaeI GCATGC 1 cut(s) 1359
PaeR7I CTCGAG 1 cut(s) 1175
PciI ACATGT 1 cut(s) 653
PdmI GAANNNNTTC 1 cut(s) 863
PfeI GAWTC 6 cut(s) 177, 311, 407, 898, 1289, 1307
PkrI GCNGC 1 cut(s) 1079
PleI GAGTC 1 cut(s) 1338
PpsI GAGTC 1 cut(s) 1338
PscI ACATGT 1 cut(s) 653
PshBI ATTAAT 1 cut(s) 1137
Psp6I CCWGG 1 cut(s) 172
PspGI CCWGG 1 cut(s) 172
PspN4I GGNNCC 1 cut(s) 10
PsuI RGATCY 3 cut(s) 721, 918, 1106
RsaI GTAC 5 cut(s) 93, 171, 308, 955, 1152
RsaNI GTAC 5 cut(s) 92, 170, 307, 954, 1151
RseI CAYNNNNRTG 1 cut(s) 82
SalI GTCGAC 1 cut(s) 251
SaqAI TTAA 8 cut(s) 123, 473, 528, 552, 753, 843, 1137, 1185
SatI GCNGC 1 cut(s) 1078
Sau3AI GATC 9 cut(s) 345, 357, 721, 772, 802, 877, 918, 939, 1106
ScaI AGTACT 1 cut(s) 955
SchI GAGTC 1 cut(s) 1338
ScrFI CCNGG 1 cut(s) 174
SduI GDGCHC 1 cut(s) 599
SfaNI GCATC 2 cut(s) 423, 730
Sfr274I CTCGAG 1 cut(s) 1175
SlaI CTCGAG 1 cut(s) 1175
SmiMI CAYNNNNRTG 1 cut(s) 82
SmlI CTYRAG 7 cut(s) 184, 752, 959, 979, 1175, 1244, 1262
SmoI CTYRAG 7 cut(s) 184, 752, 959, 979, 1175, 1244, 1262
SpeI ACTAGT 1 cut(s) 1228
SphI GCATGC 1 cut(s) 1359
Sse9I AATT 6 cut(s) 418, 647, 735, 1114, 1134, 1249
SsiI CCGC 3 cut(s) 208, 352, 695
SspMI CTAG 8 cut(s) 141, 315, 498, 605, 725, 924, 1229, 1350
StyD4I CCNGG 1 cut(s) 172
StyI CCWWGG 1 cut(s) 492
TaaI ACNGT 4 cut(s) 275, 365, 594, 838
TaiI ACGT 1 cut(s) 25
TaqI TCGA 5 cut(s) 252, 429, 480, 831, 1176
TasI AATT 6 cut(s) 418, 647, 735, 1114, 1134, 1249
TatI WGTACW 1 cut(s) 953
TfiI GAWTC 6 cut(s) 177, 311, 407, 898, 1289, 1307
Tru1I TTAA 8 cut(s) 123, 473, 528, 552, 753, 843, 1137, 1185
Tru9I TTAA 8 cut(s) 123, 473, 528, 552, 753, 843, 1137, 1185
TscAI CASTG 4 cut(s) 370, 599, 706, 775
TseFI GTSAC 1 cut(s) 669
TseI GCWGC 1 cut(s) 1077
Tsp45I GTSAC 1 cut(s) 669
TspDTI ATGAA 4 cut(s) 399, 720, 732, 1238
TspGWI ACGGA 1 cut(s) 995
TspRI CASTG 4 cut(s) 370, 599, 706, 775
Vha464I CTTAAG 1 cut(s) 752
VspI ATTAAT 1 cut(s) 1137
XapI RAATTY 2 cut(s) 647, 1249
XbaI TCTAGA 1 cut(s) 604
XceI RCATGY 2 cut(s) 657, 1359
XhoI CTCGAG 1 cut(s) 1175
XmiI GTMKAC 2 cut(s) 252, 468
XmnI GAANNNNTTC 1 cut(s) 863
XspI CTAG 8 cut(s) 141, 315, 498, 605, 725, 924, 1229, 1350
ZrmI AGTACT 1 cut(s) 955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.