Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000322

Physical Location & Seq

Genomic Coordinates Forward (+)

28944646 .. 28950851

Gene Structure 6206 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0206300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGACGACGATGGAGAGCTTGATCGGTTTGGTTAATCGGATACAGAGGGCCTGTACTGTGCTCGGCGACTACGGCGGTGGCGACAACACTTTCTCTTCCTTGTGGGAAGCTCTGCCCTCTGTTGCCGTCGTCGGCGGCCAGAGTTCGGGCAAGTCTTCGGTGCTGGAGAGCATCGTAGGGCGTGACTTTCTTCCCAGAGGATCAGGGATTGTGACGAGGCGGCCTTTGGTGTTGCAGCTGCACAAGACGGACGAAGGGACTCAGGAGTATGCCGAGTTTCTTCATCTCTCCAAGAGAAGATTTACTGATTTCTCCGCGGTTCGGAAGGAAATTCAGGATGAAACTGATAGAGTAACAGGAAGGTCAAAAATGATATCTCCTGTTCCTATCCATCTCAGTATCTACTCCCCCAACGTTGTGAACTTGACCCTAATTGATTTACCTGGTTTGACGAAAGTTGCTGTTGAGGGCCAGCCTGAAAGTATCGTTGAAGATATTGAAAACATGGTTCGATCTTATGTTGAGAAGCCTAATAGCATCATACTAGCAATATCTCCAGCCAACCAAGATATCGCTACATCTGATGCTATCAAACTTGCACGGGAAGTGGATCCAGCAGGTGAACGAACGTTTGGGGTGATGACAAAGCTTGATTTGATGGACAAAGGAACTAACGCTTTGGATGTTATTGAAGGAAGATCGTATCGCCTGCAACAACCTTGGGTTGGAGTTGTGAACCGTTCCCAAGCAGATATTAATAAAAATACGGACATGATTGTCGCAAGGCGCAAGGAACGTGAGTACTTTGCAACCAGTCCTGACTATGGGCACTTGGCTAATAGAATGGGTTCAGAGTACCTTGCTAAACTTCTGTCACAGCACTTGGAGTCTGTAATTAGGGCTCGTATCCCAAGTATCACATCCTTGATTAACAAAAGCATTGATGAACTTGAATCCGAGATGGACCATCTTGGTAGGCCTATAGCCGTTGACGCTGGGGCTCAGTTATACACTATCCTGGAACTTTGCCGTGCATTTGACCGAATATTTAAAGAGCACTTAGATGGAGGGCGACCCGGAGGTGATAGGATTTATGGTGTCTTTGACAACCAGCTGCCTGCTGCTTTGAGGAAGCTTCCATTTGATCGACATCTGTCTATGCAGAATGTAAGGAAAGTGGTTTCAGAGGCTGATGGTTATCAGCCTCACTTGATTGCCCCAGAGCAAGGTTACCGCCGCCTTATTGAGGGATCACTGAATTACTTTAGAGGTCCAGCTGAGGCTTCTGTGGATGCTGTCCACTTTGTCTTGAAAGAACTTGTGAGGAAGTCATTAGCAGAAACTCAGGAATTGAGACGGTTTCCGACTCTGCAAGCTGAAATAGCGGGTGCAGCTAATGAAGCATTGGAAAGGTTCCGTGATGAGAGTAAAAAGTCAACTCTGCGCTTAGTGGACATGGAATCCTCATACTTGACTGTGGAATTCTTTCGAAGACTTCCACAGGAAGTGGAGAAACCAGTTGGCCCAGGAGGAAAACCAGGACAGCCGGGAGGAAATCCAGCTGCCAATGCTGCTGTGGACCGCTATTCAGAGGGTCACTTTCGGAGGATAGGATCGAACGTGTCCTCTTATGTGGGAATGGTGTCTGAGACACTGAGGAATACGATTCCCAAGGCTGTCGTTCACTGTCAAGTCAGGGAGGCAAAAACGTCATTGCTAAATCACTTCTATATACAAATAGGAAAGAGAGAGGGTAAGCAGTTAGGTCAGCTGCTTGACGAAGACCCAGCATTGATGGAGAGGAGGCTACAGTGTGCTAAAAGGCTTGAATTATACAAGTCGGCTAGGGATGAGGTTGATTCTGCATCATGGGTCCGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001763 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009933 GO:0009987 GO:0010014 GO:0010016 GO:0010223 GO:0010346 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019827 GO:0022412 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032504 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048507 GO:0048532 GO:0048608 GO:0048646 GO:0048653 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0080166 GO:0090506 GO:0090567 GO:0098727 GO:0099402 GO:0140110 GO:1903506 GO:1905393 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox

Protein Analysis

626

Amino Acids

69.78

Weight (kDa)

6.93

Isoelectric Point (pI)

45.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Dynamin_N	PF00350	41 - 217	1.2e-55	Dynamin family
Dynamin_M	PF01031	225 - 492	2.6e-62	Dynamin central region
GED	PF02212	530 - 621	1.9e-23	Dynamin GTPase effector domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000322)

Species	Orthologous Gene IDs
rosa_rugosa	Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Species

Orthologous Gene IDs

rosa_rugosa

Rorug01G0045800 Rorug01G0060200 Rorug01G0078200 Rorug01G0080300 Rorug01G0080500 Rorug01G0093600 Rorug01G0096100 Rorug01G0138500.1 Rorug01G0147900.1 Rorug01G0156300.1 Rorug01G0181600 Rorug01G0183600 Rorug01G0183600 Rorug01G0196000 Rorug01G0206200 Rorug01G0206200 Rorug01G0206300 Rorug01G0206400 Rorug01G0245700 Rorug01G0267300 Rorug01G0268000 Rorug01G0324700 Rorug01G0324800 Rorug02G0034400 Rorug02G0034500 Rorug02G0104900 Rorug02G0224800 Rorug02G0224900 Rorug02G0247400 Rorug02G0261500 Rorug02G0288300 Rorug02G0297300 Rorug02G0297400 Rorug02G0314900 Rorug02G0362700 Rorug02G0438500 Rorug02G0438600 Rorug02G0438700 Rorug02G0438800 Rorug02G0525300 Rorug02G0540100 Rorug03G0147100 Rorug03G0150900 Rorug03G0171600 Rorug03G0182000 Rorug03G0200200 Rorug03G0201100 Rorug03G0218400 Rorug03G0218700 Rorug03G0268200 Rorug03G0285500 Rorug03G0296600 Rorug03G0296700 Rorug03G0296800 Rorug03G0341800 Rorug03G0347200 Rorug03G0356300 Rorug04G0029100 Rorug04G0036300 Rorug04G0046500 Rorug04G0070100 Rorug04G0098900 Rorug04G0104400 Rorug04G0167800 Rorug04G0209300 Rorug04G0210700 Rorug04G0210800 Rorug04G0212500 Rorug05G0109400 Rorug05G0148500 Rorug05G0148800 Rorug05G0160200 Rorug05G0184600 Rorug05G0206100 Rorug05G0208500 Rorug05G0208500 Rorug05G0209500 Rorug05G0235800 Rorug05G0239200 Rorug05G0301100 Rorug05G0427000 Rorug05G0451700 Rorug05G0462300 Rorug05G0467300 Rorug05G0524100 Rorug05G0527400 Rorug05G0527500 Rorug05G0561800 Rorug05G0567700 Rorug05G0574200 Rorug06G0000900 Rorug06G0018700.1 Rorug06G0025100 Rorug06G0025200 Rorug06G0025500 Rorug06G0041300 Rorug06G0048100 Rorug06G0050800 Rorug06G0053900 Rorug06G0075200 Rorug06G0080600 Rorug06G0087500.1 Rorug06G0090000 Rorug06G0141200 Rorug06G0218300 Rorug07G0106700 Rorug07G0125500 Rorug07G0185500 Rorug07G0194000 Rorug07G0196600 Rorug07G0200600 Rorug07G0217300 Rorug07G0250300 Rorug07G0301900 Rorug07G0309100.1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	608
AasI	GACNNNNNNGTC	1 cut(s)	776
Acc36I	ACCTGC	1 cut(s)	608
AccII	CGCG	1 cut(s)	317
AclI	AACGTT	2 cut(s)	414, 629
AclWI	GGATC	5 cut(s)	208, 605, 618, 1258, 1621
AcoI	YGGCCR	1 cut(s)	136
AcsI	RAATTY	2 cut(s)	330, 1481
AfaI	GTAC	3 cut(s)	55, 803, 857
AfiI	CCNNNNNNNGG	6 cut(s)	145, 321, 725, 824, 1226, 1246
AflIII	ACRYGT	1 cut(s)	1620
AgsI	TTSAA	6 cut(s)	491, 500, 692, 953, 1312, 1829
AjnI	CCWGG	4 cut(s)	442, 1017, 1525, 1537
AjuI	GAANNNNNNNTTGG	2 cut(s)	615, 647
Alw21I	GWGCWC	2 cut(s)	63, 1059
Alw26I	GTCTC	2 cut(s)	1348, 1643
AlwI	GGATC	5 cut(s)	208, 605, 618, 1258, 1621
AlwNI	CAGNNNCTG	1 cut(s)	1190
AoxI	GGCC	6 cut(s)	48, 136, 221, 469, 977, 1522
ApeKI	GCWGC	8 cut(s)	235, 238, 1114, 1121, 1391, 1562, 1571, 1771
ApoI	RAATTY	2 cut(s)	330, 1481
AseI	ATTAAT	1 cut(s)	756
Asp700I	GAANNNNTTC	2 cut(s)	847, 1485
AspLEI	GCGC	2 cut(s)	789, 1446
AspS9I	GGNCC	7 cut(s)	48, 469, 964, 1271, 1523, 1579, 1873
AsuC2I	CCSGG	2 cut(s)	1077, 1548
AsuHPI	GGTGA	3 cut(s)	632, 649, 1094
AsuII	TTCGAA	1 cut(s)	1489
AvaII	GGWCC	4 cut(s)	964, 1271, 1579, 1873
BaeGI	GKGCMC	1 cut(s)	831
BamHI	GGATCC	1 cut(s)	610
BanII	GRGCYC	2 cut(s)	904, 1003
BbsI	GAAGAC	3 cut(s)	147, 1498, 1788
Bbv12I	GWGCWC	2 cut(s)	63, 1059
BbvCI	CCTCAGC	1 cut(s)	1278
BbvI	GCAGC	8 cut(s)	225, 247, 1101, 1108, 1403, 1549, 1558, 1758
BccI	CCATC	8 cut(s)	4, 399, 652, 955, 975, 1058, 1187, 1789
BceAI	ACGGC	4 cut(s)	88, 110, 971, 1014
BciT130I	CCWGG	4 cut(s)	444, 1019, 1527, 1539
BciVI	GTATCC	2 cut(s)	33, 917
BcnI	CCSGG	2 cut(s)	1077, 1548
BcoDI	GTCTC	2 cut(s)	1348, 1643
BfaI	CTAG	2 cut(s)	545, 1845
BfmI	CTRYAG	2 cut(s)	981, 1808
BfuAI	ACCTGC	1 cut(s)	608
BfuI	GTATCC	2 cut(s)	33, 917
BmcAI	AGTACT	1 cut(s)	803
Bme1390I	CCNGG	6 cut(s)	444, 1019, 1077, 1527, 1539, 1548
Bme18I	GGWCC	4 cut(s)	964, 1271, 1579, 1873
BmgT120I	GGNCC	7 cut(s)	48, 469, 964, 1271, 1523, 1579, 1873
BmiI	GGNNCC	3 cut(s)	612, 1415, 1874
BmrFI	CCNGG	6 cut(s)	444, 1019, 1077, 1527, 1539, 1548
BmsI	GCATC	5 cut(s)	180, 546, 574, 1282, 1874
BoxI	GACNNNNGTC	1 cut(s)	1153
BpiI	GAAGAC	3 cut(s)	147, 1498, 1788
BpmI	CTGGAG	2 cut(s)	185, 540
Bpu10I	CCTNAGC	1 cut(s)	1278
Bpu14I	TTCGAA	1 cut(s)	1489
BpuMI	CCSGG	2 cut(s)	1077, 1548
BsaBI	GATNNNNATC	2 cut(s)	1149, 1197
BsaJI	CCNNGG	4 cut(s)	315, 719, 1525, 1671
Bsc4I	CCNNNNNNNGG	6 cut(s)	145, 321, 725, 824, 1226, 1246
Bse1I	ACTGG	2 cut(s)	813, 1517
Bse3DI	GCAATG	1 cut(s)	1712
Bse8I	GATNNNNATC	2 cut(s)	1149, 1197
BseBI	CCWGG	4 cut(s)	444, 1019, 1527, 1539
BseDI	CCNNGG	4 cut(s)	315, 719, 1525, 1671
BseGI	GGATG	5 cut(s)	343, 688, 920, 1297, 1855
BseJI	GATNNNNATC	2 cut(s)	1149, 1197
BseLI	CCNNNNNNNGG	6 cut(s)	145, 321, 725, 824, 1226, 1246
BseMI	GCAATG	1 cut(s)	1712
BseMII	CTCAG	7 cut(s)	275, 409, 1016, 1269, 1358, 1638, 1646
BseNI	ACTGG	2 cut(s)	813, 1517
BseRI	GAGGAG	1 cut(s)	1816
BseSI	GKGCMC	1 cut(s)	831
BseXI	GCAGC	8 cut(s)	225, 247, 1101, 1108, 1403, 1549, 1558, 1758
BseYI	CCCAGC	2 cut(s)	995, 1786
BsgI	GTGCAG	2 cut(s)	224, 1410
Bsh1236I	CGCG	1 cut(s)	317
BshFI	GGCC	6 cut(s)	50, 138, 223, 471, 979, 1524
BsiHKAI	GWGCWC	2 cut(s)	63, 1059
BsiSI	CCGG	2 cut(s)	1077, 1547
BslFI	GGGAC	1 cut(s)	271
BslI	CCNNNNNNNGG	6 cut(s)	145, 321, 725, 824, 1226, 1246
BsmAI	GTCTC	2 cut(s)	1348, 1643
BsmBI	CGTCTC	1 cut(s)	1348
BsmFI	GGGAC	1 cut(s)	271
BsnI	GGCC	6 cut(s)	50, 138, 223, 471, 979, 1524
Bsp119I	TTCGAA	1 cut(s)	1489
Bsp1286I	GDGCHC	5 cut(s)	63, 831, 904, 1003, 1059
Bsp143I	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
BspANI	GGCC	6 cut(s)	50, 138, 223, 471, 979, 1524
BspCNI	CTCAG	7 cut(s)	274, 408, 1015, 1270, 1357, 1639, 1647
BspFNI	CGCG	1 cut(s)	317
BspLI	GGNNCC	3 cut(s)	612, 1415, 1874
BspMI	ACCTGC	1 cut(s)	608
BspPI	GGATC	5 cut(s)	208, 605, 618, 1258, 1621
BspT104I	TTCGAA	1 cut(s)	1489
BsrDI	GCAATG	1 cut(s)	1712
BsrI	ACTGG	2 cut(s)	813, 1517
BssECI	CCNNGG	4 cut(s)	315, 719, 1525, 1671
BssMI	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
BssT1I	CCWWGG	2 cut(s)	719, 1671
Bst2UI	CCWGG	4 cut(s)	444, 1019, 1527, 1539
Bst4CI	ACNGT	6 cut(s)	58, 740, 1359, 1477, 1688, 1812
Bst6I	CTCTTC	1 cut(s)	100
BstBI	TTCGAA	1 cut(s)	1489
BstC8I	GCNNGC	4 cut(s)	473, 710, 1119, 1374
BstDEI	CTNAG	9 cut(s)	261, 395, 1002, 1060, 1278, 1344, 1447, 1647, 1655
BstDSI	CCRYGG	1 cut(s)	315
BstEII	GGTNACC	1 cut(s)	1229
BstENI	CCTNNNNNAGG	1 cut(s)	1244
BstF5I	GGATG	5 cut(s)	343, 688, 920, 1297, 1855
BstFNI	CGCG	1 cut(s)	317
BstHHI	GCGC	2 cut(s)	789, 1446
BstKTI	GATC	8 cut(s)	24, 203, 515, 613, 701, 1147, 1253, 1616
BstMAI	GTCTC	2 cut(s)	1348, 1643
BstMBI	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
BstMWI	GCNNNNNNNGC	7 cut(s)	72, 992, 1382, 1391, 1400, 1568, 1571
BstNI	CCWGG	4 cut(s)	444, 1019, 1527, 1539
BstPAI	GACNNNNGTC	1 cut(s)	1153
BstPI	GGTNACC	1 cut(s)	1229
BstSCI	CCNGG	6 cut(s)	442, 1017, 1075, 1525, 1537, 1546
BstSFI	CTRYAG	2 cut(s)	981, 1808
BstSLI	GKGCMC	1 cut(s)	831
BstUI	CGCG	1 cut(s)	317
BstV1I	GCAGC	8 cut(s)	225, 247, 1101, 1108, 1403, 1549, 1558, 1758
BstV2I	GAAGAC	3 cut(s)	147, 1498, 1788
BstX2I	RGATCY	1 cut(s)	610
BstYI	RGATCY	1 cut(s)	610
BsuI	GTATCC	2 cut(s)	33, 917
BsuRI	GGCC	6 cut(s)	50, 138, 223, 471, 979, 1524
BtgI	CCRYGG	1 cut(s)	315
BtsCI	GGATG	5 cut(s)	343, 688, 920, 1297, 1855
BtsIMutI	CAGTG	4 cut(s)	1253, 1652, 1684, 1817
BveI	ACCTGC	1 cut(s)	608
Cac8I	GCNNGC	4 cut(s)	473, 710, 1119, 1374
CaiI	CAGNNNCTG	1 cut(s)	1190
CfoI	GCGC	2 cut(s)	789, 1446
Cfr13I	GGNCC	7 cut(s)	48, 469, 964, 1271, 1523, 1579, 1873
Cfr42I	CCGCGG	1 cut(s)	318
CseI	GACGC	1 cut(s)	1001
CsiI	ACCWGGT	1 cut(s)	442
Csp6I	GTAC	3 cut(s)	54, 802, 856
CviAII	CATG	4 cut(s)	505, 772, 1456, 1869
CviQI	GTAC	3 cut(s)	54, 802, 856
DdeI	CTNAG	9 cut(s)	261, 395, 1002, 1060, 1278, 1344, 1447, 1647, 1655
DpnI	GATC	8 cut(s)	23, 202, 514, 612, 700, 1146, 1252, 1615
DpnII	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
DraI	TTTAAA	1 cut(s)	1051
DrdI	GACNNNNNNGTC	1 cut(s)	776
DseDI	GACNNNNNNGTC	1 cut(s)	776
EaeI	YGGCCR	1 cut(s)	136
Eam1104I	CTCTTC	1 cut(s)	100
EarI	CTCTTC	1 cut(s)	100
Eco130I	CCWWGG	2 cut(s)	719, 1671
Eco147I	AGGCCT	1 cut(s)	979
Eco24I	GRGCYC	2 cut(s)	904, 1003
Eco32I	GATATC	2 cut(s)	375, 571
Eco47I	GGWCC	4 cut(s)	964, 1271, 1579, 1873
Eco91I	GGTNACC	1 cut(s)	1229
EcoNI	CCTNNNNNAGG	1 cut(s)	1244
EcoO109I	RGGNCCY	1 cut(s)	48
EcoO65I	GGTNACC	1 cut(s)	1229
EcoRI	GAATTC	1 cut(s)	1481
EcoRII	CCWGG	4 cut(s)	442, 1017, 1525, 1537
EcoRV	GATATC	2 cut(s)	375, 571
EcoT14I	CCWWGG	2 cut(s)	719, 1671
EcoT38I	GRGCYC	2 cut(s)	904, 1003
ErhI	CCWWGG	2 cut(s)	719, 1671
Esp3I	CGTCTC	1 cut(s)	1348
FaeI	CATG	4 cut(s)	508, 775, 1459, 1872
FaqI	GGGAC	1 cut(s)	271
FatI	CATG	4 cut(s)	504, 771, 1455, 1868
FauI	CCCGC	1 cut(s)	1378
FokI	GGATG	5 cut(s)	350, 695, 907, 1304, 1862
FriOI	GRGCYC	2 cut(s)	904, 1003
FspBI	CTAG	2 cut(s)	545, 1845
GlaI	GCGC	2 cut(s)	788, 1445
GsaI	CCCAGC	2 cut(s)	999, 1790
GsuI	CTGGAG	2 cut(s)	185, 540
HaeIII	GGCC	6 cut(s)	50, 138, 223, 471, 979, 1524
HapII	CCGG	2 cut(s)	1077, 1547
HgaI	GACGC	1 cut(s)	1001
HhaI	GCGC	2 cut(s)	789, 1446
Hin1II	CATG	4 cut(s)	508, 775, 1459, 1872
Hin6I	GCGC	2 cut(s)	787, 1444
HinP1I	GCGC	2 cut(s)	787, 1444
HincII	GTYRAC	2 cut(s)	991, 1437
HindII	GTYRAC	2 cut(s)	991, 1437
HindIII	AAGCTT	2 cut(s)	647, 1133
HinfI	GANTC	7 cut(s)	259, 887, 953, 1366, 1460, 1666, 1859
HpaII	CCGG	2 cut(s)	1077, 1547
HphI	GGTGA	3 cut(s)	632, 649, 1094
Hpy166II	GTNNAC	9 cut(s)	421, 623, 736, 991, 1300, 1437, 1453, 1579, 1684
Hpy188III	TCNNGA	5 cut(s)	263, 335, 818, 1309, 1346
Hpy8I	GTNNAC	9 cut(s)	421, 623, 736, 991, 1300, 1437, 1453, 1579, 1684
Hpy99I	CGWCG	3 cut(s)	10, 131, 134
HpyAV	CCTTC	4 cut(s)	248, 319, 354, 686
HpyCH4III	ACNGT	6 cut(s)	58, 740, 1359, 1477, 1688, 1812
HpyCH4IV	ACGT	5 cut(s)	414, 629, 796, 1620, 1709
HpyF10VI	GCNNNNNNNGC	7 cut(s)	72, 992, 1382, 1391, 1400, 1568, 1571
HpyF3I	CTNAG	9 cut(s)	261, 395, 1002, 1060, 1278, 1344, 1447, 1647, 1655
HpySE526I	ACGT	5 cut(s)	414, 629, 796, 1620, 1709
Hsp92II	CATG	4 cut(s)	508, 775, 1459, 1872
HspAI	GCGC	2 cut(s)	787, 1444
KspI	CCGCGG	1 cut(s)	318
Kzo9I	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
Lsp1109I	GCAGC	8 cut(s)	225, 247, 1101, 1108, 1403, 1549, 1558, 1758
LweI	GCATC	5 cut(s)	180, 546, 574, 1282, 1874
MabI	ACCWGGT	1 cut(s)	442
MaeI	CTAG	2 cut(s)	545, 1845
MaeII	ACGT	5 cut(s)	414, 629, 796, 1620, 1709
MaeIII	GTNAC	6 cut(s)	182, 211, 352, 873, 1229, 1595
MalI	GATC	8 cut(s)	23, 202, 514, 612, 700, 1146, 1252, 1615
MboI	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
MboII	GAAGA	9 cut(s)	87, 147, 182, 272, 309, 503, 708, 1503, 1793
MflI	RGATCY	1 cut(s)	610
MhlI	GDGCHC	5 cut(s)	63, 831, 904, 1003, 1059
MluCI	AATT	7 cut(s)	330, 432, 894, 1258, 1349, 1481, 1829
MlyI	GAGTC	3 cut(s)	253, 896, 1360
MmeI	TCCRAC	2 cut(s)	706, 1388
MroXI	GAANNNNTTC	2 cut(s)	847, 1485
MseI	TTAA	4 cut(s)	33, 756, 930, 1050
MslI	CAYNNNNRTG	1 cut(s)	1062
MspA1I	CMGCKG	7 cut(s)	238, 317, 1114, 1277, 1562, 1771, 1878
MspI	CCGG	2 cut(s)	1077, 1547
MspR9I	CCNGG	6 cut(s)	444, 1019, 1077, 1527, 1539, 1548
MvaI	CCWGG	4 cut(s)	444, 1019, 1527, 1539
MvnI	CGCG	1 cut(s)	317
MwoI	GCNNNNNNNGC	7 cut(s)	72, 992, 1382, 1391, 1400, 1568, 1571
NciI	CCSGG	2 cut(s)	1077, 1548
NdeII	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
NlaIII	CATG	4 cut(s)	508, 775, 1459, 1872
NlaIV	GGNNCC	3 cut(s)	612, 1415, 1874
NmeAIII	GCCGAG	2 cut(s)	42, 298
NmuCI	GTSAC	4 cut(s)	182, 211, 873, 1595
NspV	TTCGAA	1 cut(s)	1489
PaqCI	CACCTGC	1 cut(s)	608
PceI	AGGCCT	1 cut(s)	979
PcsI	WCGNNNNNNNCGW	1 cut(s)	78
PdmI	GAANNNNTTC	2 cut(s)	847, 1485
PfeI	GAWTC	4 cut(s)	953, 1460, 1666, 1859
PfoI	TCCNGGA	1 cut(s)	1017
PleI	GAGTC	3 cut(s)	253, 895, 1360
PpsI	GAGTC	3 cut(s)	253, 895, 1360
PshAI	GACNNNNGTC	1 cut(s)	1153
PshBI	ATTAAT	1 cut(s)	756
Psp1406I	AACGTT	2 cut(s)	414, 629
Psp6I	CCWGG	4 cut(s)	442, 1017, 1525, 1537
PspEI	GGTNACC	1 cut(s)	1229
PspFI	CCCAGC	2 cut(s)	995, 1786
PspGI	CCWGG	4 cut(s)	442, 1017, 1525, 1537
PspN4I	GGNNCC	3 cut(s)	612, 1415, 1874
PspPI	GGNCC	7 cut(s)	48, 469, 964, 1271, 1523, 1579, 1873
PstNI	CAGNNNCTG	1 cut(s)	1190
PsuI	RGATCY	1 cut(s)	610
PvuII	CAGCTG	5 cut(s)	238, 1114, 1277, 1562, 1771
RsaI	GTAC	3 cut(s)	55, 803, 857
RsaNI	GTAC	3 cut(s)	54, 802, 856
RseI	CAYNNNNRTG	1 cut(s)	1062
SacII	CCGCGG	1 cut(s)	318
SaqAI	TTAA	4 cut(s)	33, 756, 930, 1050
Sau3AI	GATC	8 cut(s)	21, 200, 512, 610, 698, 1144, 1250, 1613
Sau96I	GGNCC	7 cut(s)	48, 469, 964, 1271, 1523, 1579, 1873
ScaI	AGTACT	1 cut(s)	803
SchI	GAGTC	3 cut(s)	253, 896, 1360
ScrFI	CCNGG	6 cut(s)	444, 1019, 1077, 1527, 1539, 1548
SduI	GDGCHC	5 cut(s)	63, 831, 904, 1003, 1059
SexAI	ACCWGGT	1 cut(s)	442
SfaNI	GCATC	5 cut(s)	180, 546, 574, 1282, 1874
SfcI	CTRYAG	2 cut(s)	981, 1808
Sfr303I	CCGCGG	1 cut(s)	318
SfuI	TTCGAA	1 cut(s)	1489
SgrBI	CCGCGG	1 cut(s)	318
SinI	GGWCC	4 cut(s)	964, 1271, 1579, 1873
SmiMI	CAYNNNNRTG	1 cut(s)	1062
Sse9I	AATT	7 cut(s)	330, 432, 894, 1258, 1349, 1481, 1829
SseBI	AGGCCT	1 cut(s)	979
SspI	AATATT	1 cut(s)	1047
SspMI	CTAG	2 cut(s)	545, 1845
StuI	AGGCCT	1 cut(s)	979
StyD4I	CCNGG	6 cut(s)	442, 1017, 1075, 1525, 1537, 1546
StyI	CCWWGG	2 cut(s)	719, 1671
TaaI	ACNGT	6 cut(s)	58, 740, 1359, 1477, 1688, 1812
TaiI	ACGT	5 cut(s)	417, 632, 799, 1623, 1712
TaqI	TCGA	4 cut(s)	511, 1147, 1489, 1616
TaqII	GACCGA	1 cut(s)	1056
TasI	AATT	7 cut(s)	330, 432, 894, 1258, 1349, 1481, 1829
TatI	WGTACW	2 cut(s)	53, 801
TauI	GCSGC	3 cut(s)	138, 223, 1239
TfiI	GAWTC	4 cut(s)	953, 1460, 1666, 1859
Tru1I	TTAA	4 cut(s)	33, 756, 930, 1050
Tru9I	TTAA	4 cut(s)	33, 756, 930, 1050
TscAI	CASTG	4 cut(s)	1260, 1659, 1691, 1817
TseFI	GTSAC	4 cut(s)	182, 211, 873, 1595
TseI	GCWGC	8 cut(s)	235, 238, 1114, 1121, 1391, 1562, 1571, 1771
Tsp45I	GTSAC	4 cut(s)	182, 211, 873, 1595
TspDTI	ATGAA	4 cut(s)	272, 354, 960, 1413
TspGWI	ACGGA	3 cut(s)	263, 782, 1406
TspRI	CASTG	4 cut(s)	1260, 1659, 1691, 1817
VpaK11BI	GGWCC	4 cut(s)	964, 1271, 1579, 1873
VspI	ATTAAT	1 cut(s)	756
XagI	CCTNNNNNAGG	1 cut(s)	1244
XapI	RAATTY	2 cut(s)	330, 1481
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1573
XmnI	GAANNNNTTC	2 cut(s)	847, 1485
XspI	CTAG	2 cut(s)	545, 1845
ZrmI	AGTACT	1 cut(s)	803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.