RLG00000036251

Protein of unknown function (DUF632)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0021507
Physical Location & Seq
Forward (+)
78068733 .. 78069280
548 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036251

Sequence Viewer

Length: 357 bp
ATGGTAGTGGTGGTGGTTATGGCGCTAACTTGCCTGGTGAAGCACGTGACAGGGGAGCAGGATAAAGAGAAGGGAAGGAAAAAGAGTGTGGTGTGGCCACTGTTGAAGAGGACGAGGATGAGGAAGAAGAGGACCATGAGGGAAAAAAAGGATGAGAATGTAGAGGATTTGGGTGATGGCGATGAGCCCAAGACCCCGGAAGCGGAGGAGATTCAGGTGAAGCATGAGGAGATTTCAGTGTCTCCAATAACTCCGGCGACAGTTGAGCATTCGAAGACAACCCCACCAGATTTTCAGAGGATGGTGGTGCCCGGTTTTAACTTTCGCGATCCAGTTGTGAAGTTAGAACAAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF630 DUF632

Protein Analysis

119

Amino Acids

13.53

Weight (kDa)

8.71

Isoelectric Point (pI)

36.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021507)

Species Orthologous Gene IDs
rosa_laevigata RLG00000003446 RLG00000013706 RLG00000036251
rosa_multiflora Rmu_sc0001322.1_g000007 Rmu_sc0004923.1_g000009

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 307
AccII CGCG 1 cut(s) 327
AciI CCGC 1 cut(s) 203
AclWI GGATC 1 cut(s) 323
AcoI YGGCCR 1 cut(s) 95
AcsI RAATTY 1 cut(s) 351
AcvI CACGTG 1 cut(s) 46
AfiI CCNNNNNNNGG 1 cut(s) 202
AgsI TTSAA 1 cut(s) 106
AjnI CCWGG 1 cut(s) 33
Alw26I GTCTC 1 cut(s) 246
AlwI GGATC 1 cut(s) 323
AoxI GGCC 1 cut(s) 95
ApoI RAATTY 1 cut(s) 351
AspLEI GCGC 1 cut(s) 25
AspS9I GGNCC 1 cut(s) 132
AsuC2I CCSGG 2 cut(s) 197, 312
AsuHPI GGTGA 3 cut(s) 49, 185, 229
AsuII TTCGAA 1 cut(s) 272
AvaII GGWCC 1 cut(s) 132
BaeGI GKGCMC 1 cut(s) 312
BalI TGGCCA 1 cut(s) 97
BanI GGYRCC 1 cut(s) 307
BanII GRGCYC 1 cut(s) 189
BbrPI CACGTG 1 cut(s) 46
BbsI GAAGAC 1 cut(s) 281
BccI CCATC 2 cut(s) 170, 295
BciT130I CCWGG 1 cut(s) 35
BcnI CCSGG 2 cut(s) 197, 312
BcoDI GTCTC 1 cut(s) 246
BfoI RGCGCY 1 cut(s) 26
Bme1390I CCNGG 3 cut(s) 35, 197, 312
Bme18I GGWCC 1 cut(s) 132
BmgT120I GGNCC 1 cut(s) 132
BmiI GGNNCC 1 cut(s) 309
BmrFI CCNGG 3 cut(s) 35, 197, 312
BpiI GAAGAC 1 cut(s) 281
Bpu14I TTCGAA 1 cut(s) 272
BpuMI CCSGG 2 cut(s) 197, 312
BsaAI YACGTR 1 cut(s) 46
BsaJI CCNNGG 1 cut(s) 195
Bsc4I CCNNNNNNNGG 1 cut(s) 202
Bse1I ACTGG 1 cut(s) 332
BseBI CCWGG 1 cut(s) 35
BseDI CCNNGG 1 cut(s) 195
BseGI GGATG 3 cut(s) 123, 157, 306
BseLI CCNNNNNNNGG 1 cut(s) 202
BseNI ACTGG 1 cut(s) 332
BseRI GAGGAG 2 cut(s) 221, 242
BseSI GKGCMC 1 cut(s) 312
Bsh1236I CGCG 1 cut(s) 327
BshFI GGCC 1 cut(s) 97
BshNI GGYRCC 1 cut(s) 307
BsiSI CCGG 3 cut(s) 197, 254, 312
BslI CCNNNNNNNGG 1 cut(s) 202
BsmAI GTCTC 1 cut(s) 246
BsmI GAATGC 1 cut(s) 268
BsnI GGCC 1 cut(s) 97
Bsp119I TTCGAA 1 cut(s) 272
Bsp1286I GDGCHC 2 cut(s) 189, 312
Bsp143I GATC 1 cut(s) 328
Bsp68I TCGCGA 1 cut(s) 327
BspACI CCGC 1 cut(s) 203
BspANI GGCC 1 cut(s) 97
BspFNI CGCG 1 cut(s) 327
BspLI GGNNCC 1 cut(s) 309
BspPI GGATC 1 cut(s) 323
BspT104I TTCGAA 1 cut(s) 272
BspT107I GGYRCC 1 cut(s) 307
BsrI ACTGG 1 cut(s) 332
BssECI CCNNGG 1 cut(s) 195
BssMI GATC 1 cut(s) 328
Bst2UI CCWGG 1 cut(s) 35
Bst4CI ACNGT 2 cut(s) 102, 262
Bst6I CTCTTC 2 cut(s) 101, 122
BstBAI YACGTR 1 cut(s) 46
BstBI TTCGAA 1 cut(s) 272
BstF5I GGATG 3 cut(s) 123, 157, 306
BstFNI CGCG 1 cut(s) 327
BstH2I RGCGCY 1 cut(s) 26
BstHHI GCGC 1 cut(s) 25
BstKTI GATC 1 cut(s) 331
BstMAI GTCTC 1 cut(s) 246
BstMBI GATC 1 cut(s) 328
BstNI CCWGG 1 cut(s) 35
BstSCI CCNGG 3 cut(s) 33, 195, 310
BstSLI GKGCMC 1 cut(s) 312
BstUI CGCG 1 cut(s) 327
BstV2I GAAGAC 1 cut(s) 281
BsuRI GGCC 1 cut(s) 97
BtgZI GCGATG 1 cut(s) 195
BtsCI GGATG 3 cut(s) 123, 157, 306
BtsIMutI CAGTG 2 cut(s) 98, 243
BtuMI TCGCGA 1 cut(s) 327
CfoI GCGC 1 cut(s) 25
Cfr13I GGNCC 1 cut(s) 132
CviAII CATG 2 cut(s) 136, 224
CviJI RGCY 2 cut(s) 97, 187
CviKI_1 RGCY 2 cut(s) 97, 187
DpnI GATC 1 cut(s) 330
DpnII GATC 1 cut(s) 328
EaeI YGGCCR 1 cut(s) 95
Eam1104I CTCTTC 2 cut(s) 101, 122
EarI CTCTTC 2 cut(s) 101, 122
Eco24I GRGCYC 1 cut(s) 189
Eco47I GGWCC 1 cut(s) 132
Eco72I CACGTG 1 cut(s) 46
EcoRII CCWGG 1 cut(s) 33
EcoT38I GRGCYC 1 cut(s) 189
FaeI CATG 2 cut(s) 139, 227
FaiI YATR 3 cut(s) 20, 137, 225
FatI CATG 2 cut(s) 135, 223
FokI GGATG 3 cut(s) 130, 164, 313
FriOI GRGCYC 1 cut(s) 189
GlaI GCGC 1 cut(s) 24
HaeII RGCGCY 1 cut(s) 26
HaeIII GGCC 1 cut(s) 97
HapII CCGG 3 cut(s) 197, 254, 312
HhaI GCGC 1 cut(s) 25
Hin1II CATG 2 cut(s) 139, 227
Hin6I GCGC 1 cut(s) 23
HinP1I GCGC 1 cut(s) 23
HinfI GANTC 1 cut(s) 211
HpaII CCGG 3 cut(s) 197, 254, 312
HphI GGTGA 3 cut(s) 49, 185, 229
Hpy188I TCNGA 1 cut(s) 297
Hpy188III TCNNGA 1 cut(s) 326
HpyAV CCTTC 2 cut(s) 64, 69
HpyCH4III ACNGT 2 cut(s) 102, 262
HpyCH4IV ACGT 1 cut(s) 45
HpySE526I ACGT 1 cut(s) 45
Hsp92II CATG 2 cut(s) 139, 227
HspAI GCGC 1 cut(s) 23
Kzo9I GATC 1 cut(s) 328
LmnI GCTCC 1 cut(s) 55
MaeII ACGT 1 cut(s) 45
MaeIII GTNAC 1 cut(s) 46
MalI GATC 1 cut(s) 330
MboI GATC 1 cut(s) 328
MboII GAAGA 4 cut(s) 118, 136, 139, 286
MhlI GDGCHC 2 cut(s) 189, 312
MlsI TGGCCA 1 cut(s) 97
MluCI AATT 1 cut(s) 351
MluNI TGGCCA 1 cut(s) 97
MnlI CCTC 9 cut(s) 102, 108, 114, 123, 132, 157, 199, 220, 291
Mox20I TGGCCA 1 cut(s) 97
MscI TGGCCA 1 cut(s) 97
MseI TTAA 1 cut(s) 318
Msp20I TGGCCA 1 cut(s) 97
MspI CCGG 3 cut(s) 197, 254, 312
MspR9I CCNGG 3 cut(s) 35, 197, 312
Mva1269I GAATGC 1 cut(s) 268
MvaI CCWGG 1 cut(s) 35
MvnI CGCG 1 cut(s) 327
NciI CCSGG 2 cut(s) 197, 312
NdeII GATC 1 cut(s) 328
NlaIII CATG 2 cut(s) 139, 227
NlaIV GGNNCC 1 cut(s) 309
NmuCI GTSAC 1 cut(s) 46
NruI TCGCGA 1 cut(s) 327
NspV TTCGAA 1 cut(s) 272
PctI GAATGC 1 cut(s) 268
PfeI GAWTC 1 cut(s) 211
PmaCI CACGTG 1 cut(s) 46
PmlI CACGTG 1 cut(s) 46
Ppu21I YACGTR 1 cut(s) 46
Psp6I CCWGG 1 cut(s) 33
PspCI CACGTG 1 cut(s) 46
PspGI CCWGG 1 cut(s) 33
PspN4I GGNNCC 1 cut(s) 309
PspPI GGNCC 1 cut(s) 132
RruI TCGCGA 1 cut(s) 327
SaqAI TTAA 1 cut(s) 318
Sau3AI GATC 1 cut(s) 328
Sau96I GGNCC 1 cut(s) 132
ScrFI CCNGG 3 cut(s) 35, 197, 312
SduI GDGCHC 2 cut(s) 189, 312
SetI ASST 2 cut(s) 48, 219
SfuI TTCGAA 1 cut(s) 272
SinI GGWCC 1 cut(s) 132
Sse9I AATT 1 cut(s) 351
SsiI CCGC 1 cut(s) 203
StyD4I CCNGG 3 cut(s) 33, 195, 310
TaaI ACNGT 2 cut(s) 102, 262
TaiI ACGT 1 cut(s) 48
TaqI TCGA 1 cut(s) 272
TasI AATT 1 cut(s) 351
TfiI GAWTC 1 cut(s) 211
Tru1I TTAA 1 cut(s) 318
Tru9I TTAA 1 cut(s) 318
TscAI CASTG 2 cut(s) 105, 243
TseFI GTSAC 1 cut(s) 46
Tsp45I GTSAC 1 cut(s) 46
TspRI CASTG 2 cut(s) 105, 243
VpaK11BI GGWCC 1 cut(s) 132
XapI RAATTY 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.