Rmu_co7978254.1_g000001

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co7978254.1
Physical Location & Seq
Forward (+)
71 .. 502
432 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co7978254.1_g000001.1.cds

Sequence Viewer

Length: 432 bp
atgggatgggtcatgaatgaggtgttccgattatatccttcaggaccaaatgcacagaggcaagctaaagatgacattcgagtgagtgaagacctaacaatccctagaggaaccaatttgtggattgacattgtgggcatgcaccatgactcagagctgtggggtgaggatgtgcatgagttcaagccagagaggtttaaggatgatattaatggtgggtgcaagcacaaaatgggtttcttaccttttgggtttggaggaaggatgtgcattggtagaaacttgagctttttggagtataagattgtgctgaccctaattctgtctaggttttcttttaccatgtctcctacatattgtcactgcccttcaactttactcactatgaggccatcttatggtctgcctctagtattccagcccttggactga

Protein Analysis

143

Amino Acids

16.43

Weight (kDa)

6.5

Isoelectric Point (pI)

46.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0021175)

Species Orthologous Gene IDs
malus_domestica MD01G1202800.v1.1
pyrus_communis pycom01g21210 pycom07g24890
rosa_multiflora Rmu_co7978254.1_g000001
rosa_samantha Rh1CG394500

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 3 cut(s) 120, 398, 424
AcuI CTGAAG 1 cut(s) 24
AfiI CCNNNNNNNGG 3 cut(s) 120, 398, 424
AgsI TTSAA 2 cut(s) 184, 372
AluBI AGCT 3 cut(s) 65, 157, 288
AluI AGCT 3 cut(s) 65, 157, 288
Alw26I GTCTC 1 cut(s) 351
AoxI GGCC 1 cut(s) 389
AseI ATTAAT 1 cut(s) 210
AspS9I GGNCC 1 cut(s) 44
AsuHPI GGTGA 1 cut(s) 176
AvaII GGWCC 1 cut(s) 44
BbsI GAAGAC 1 cut(s) 96
BccI CCATC 1 cut(s) 400
BcoDI GTCTC 1 cut(s) 351
BfaI CTAG 3 cut(s) 105, 327, 410
Bme18I GGWCC 1 cut(s) 44
BmgT120I GGNCC 1 cut(s) 44
BmiI GGNNCC 1 cut(s) 112
BpiI GAAGAC 1 cut(s) 96
BpuEI CTTGAG 1 cut(s) 304
BsaJI CCNNGG 1 cut(s) 423
BsaXI ACNNNNNCTCC 2 cut(s) 331, 361
Bsc4I CCNNNNNNNGG 3 cut(s) 120, 398, 424
BseDI CCNNGG 1 cut(s) 423
BseGI GGATG 4 cut(s) 11, 175, 208, 270
BseLI CCNNNNNNNGG 3 cut(s) 120, 398, 424
BseMII CTCAG 1 cut(s) 165
BshFI GGCC 1 cut(s) 391
BslI CCNNNNNNNGG 3 cut(s) 120, 398, 424
BsmAI GTCTC 1 cut(s) 351
BsnI GGCC 1 cut(s) 391
BspANI GGCC 1 cut(s) 391
BspCNI CTCAG 1 cut(s) 164
BspHI TCATGA 1 cut(s) 12
BspLI GGNNCC 1 cut(s) 112
BssECI CCNNGG 1 cut(s) 423
BssT1I CCWWGG 1 cut(s) 423
BstC8I GCNNGC 3 cut(s) 63, 140, 224
BstDEI CTNAG 1 cut(s) 151
BstF5I GGATG 4 cut(s) 11, 175, 208, 270
BstMAI GTCTC 1 cut(s) 351
BstNSI RCATGY 1 cut(s) 142
BstV2I GAAGAC 1 cut(s) 96
BsuRI GGCC 1 cut(s) 391
BtsCI GGATG 4 cut(s) 11, 175, 208, 270
BtsI GCAGTG 1 cut(s) 361
BtsIMutI CAGTG 1 cut(s) 361
Cac8I GCNNGC 3 cut(s) 63, 140, 224
CciI TCATGA 1 cut(s) 12
Cfr13I GGNCC 1 cut(s) 44
CviAII CATG 5 cut(s) 13, 139, 146, 176, 343
CviJI RGCY 6 cut(s) 65, 157, 187, 288, 391, 421
CviKI_1 RGCY 6 cut(s) 65, 157, 187, 288, 391, 421
DdeI CTNAG 1 cut(s) 151
Eco130I CCWWGG 1 cut(s) 423
Eco47I GGWCC 1 cut(s) 44
Eco57I CTGAAG 1 cut(s) 24
EcoT14I CCWWGG 1 cut(s) 423
ErhI CCWWGG 1 cut(s) 423
FaeI CATG 5 cut(s) 16, 142, 149, 179, 346
FatI CATG 5 cut(s) 12, 138, 145, 175, 342
FokI GGATG 4 cut(s) 18, 182, 215, 277
FspBI CTAG 3 cut(s) 105, 327, 410
HaeIII GGCC 1 cut(s) 391
Hin1II CATG 5 cut(s) 16, 142, 149, 179, 346
HinfI GANTC 1 cut(s) 149
HphI GGTGA 1 cut(s) 176
Hpy188I TCNGA 2 cut(s) 29, 154
Hpy188III TCNNGA 2 cut(s) 13, 42
HpyAV CCTTC 3 cut(s) 48, 255, 378
HpyCH4V TGCA 5 cut(s) 53, 142, 175, 222, 270
HpyF3I CTNAG 1 cut(s) 151
Hsp92II CATG 5 cut(s) 16, 142, 149, 179, 346
LpnPI CCDG 2 cut(s) 27, 201
MaeI CTAG 3 cut(s) 105, 327, 410
MaeIII GTNAC 1 cut(s) 359
MboII GAAGA 1 cut(s) 101
MluCI AATT 2 cut(s) 115, 318
MlyI GAGTC 1 cut(s) 143
MnlI CCTC 8 cut(s) 13, 51, 101, 160, 186, 251, 381, 417
MseI TTAA 2 cut(s) 198, 210
MslI CAYNNNNRTG 1 cut(s) 80
NlaIII CATG 5 cut(s) 16, 142, 149, 179, 346
NlaIV GGNNCC 1 cut(s) 112
NmuCI GTSAC 1 cut(s) 359
NspI RCATGY 1 cut(s) 142
PaeI GCATGC 1 cut(s) 142
PagI TCATGA 1 cut(s) 12
PflMI CCANNNNNTGG 3 cut(s) 120, 398, 424
PleI GAGTC 1 cut(s) 143
PpsI GAGTC 1 cut(s) 143
PshBI ATTAAT 1 cut(s) 210
PspN4I GGNNCC 1 cut(s) 112
PspPI GGNCC 1 cut(s) 44
RseI CAYNNNNRTG 1 cut(s) 80
SaqAI TTAA 2 cut(s) 198, 210
Sau96I GGNCC 1 cut(s) 44
SchI GAGTC 1 cut(s) 143
SetI ASST 8 cut(s) 24, 67, 96, 159, 197, 247, 290, 332
SinI GGWCC 1 cut(s) 44
SmiMI CAYNNNNRTG 1 cut(s) 80
SmlI CTYRAG 1 cut(s) 283
SmoI CTYRAG 1 cut(s) 283
SphI GCATGC 1 cut(s) 142
Sse9I AATT 2 cut(s) 115, 318
SspMI CTAG 3 cut(s) 105, 327, 410
StyI CCWWGG 1 cut(s) 423
TaqI TCGA 1 cut(s) 79
TasI AATT 2 cut(s) 115, 318
Tru1I TTAA 2 cut(s) 198, 210
Tru9I TTAA 2 cut(s) 198, 210
TscAI CASTG 1 cut(s) 368
TseFI GTSAC 1 cut(s) 359
Tsp45I GTSAC 1 cut(s) 359
TspDTI ATGAA 1 cut(s) 29
TspRI CASTG 1 cut(s) 368
Van91I CCANNNNNTGG 3 cut(s) 120, 398, 424
VpaK11BI GGWCC 1 cut(s) 44
VspI ATTAAT 1 cut(s) 210
XceI RCATGY 1 cut(s) 142
XspI CTAG 3 cut(s) 105, 327, 410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.