ABC transporter C family member
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0015431 RchiOBHm_Chr5g0015471 RchiOBHm_Chr5g0067651 |
| rosa_multiflora | Rmu_co8264059.1_g000001 |
| rosa_rugosa | Rorug05G0027600 |
| rosa_wichuraiana | Rw5G045960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 149 |
| AgsI | TTSAA | 1 cut(s) | 97 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 119 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 107, 139 |
| BccI | CCATC | 1 cut(s) | 36 |
| BfmI | CTRYAG | 2 cut(s) | 72, 124 |
| BglII | AGATCT | 2 cut(s) | 21, 131 |
| BmsI | GCATC | 1 cut(s) | 73 |
| BsaBI | GATNNNNATC | 1 cut(s) | 26 |
| Bse8I | GATNNNNATC | 1 cut(s) | 26 |
| BseGI | GGATG | 1 cut(s) | 88 |
| BseJI | GATNNNNATC | 1 cut(s) | 26 |
| Bsp1407I | TGTACA | 1 cut(s) | 147 |
| Bsp143I | GATC | 2 cut(s) | 21, 131 |
| BsrGI | TGTACA | 1 cut(s) | 147 |
| BssMI | GATC | 2 cut(s) | 21, 131 |
| Bst4CI | ACNGT | 1 cut(s) | 112 |
| BstAUI | TGTACA | 1 cut(s) | 147 |
| BstDEI | CTNAG | 1 cut(s) | 168 |
| BstF5I | GGATG | 1 cut(s) | 88 |
| BstKTI | GATC | 2 cut(s) | 24, 134 |
| BstMBI | GATC | 2 cut(s) | 21, 131 |
| BstSFI | CTRYAG | 2 cut(s) | 72, 124 |
| BstX2I | RGATCY | 2 cut(s) | 21, 131 |
| BstYI | RGATCY | 2 cut(s) | 21, 131 |
| BtsCI | GGATG | 1 cut(s) | 88 |
| BtsIMutI | CAGTG | 2 cut(s) | 117, 160 |
| Csp6I | GTAC | 1 cut(s) | 148 |
| CviQI | GTAC | 1 cut(s) | 148 |
| DdeI | CTNAG | 1 cut(s) | 168 |
| DpnI | GATC | 2 cut(s) | 23, 133 |
| DpnII | GATC | 2 cut(s) | 21, 131 |
| FaiI | YATR | 3 cut(s) | 27, 69, 74 |
| FokI | GGATG | 1 cut(s) | 95 |
| FspEI | CC | 8 cut(s) | 28, 31, 42, 63, 64, 65, 74, 101 |
| HpyAV | CCTTC | 1 cut(s) | 109 |
| HpyCH4III | ACNGT | 1 cut(s) | 112 |
| HpyF3I | CTNAG | 1 cut(s) | 168 |
| Kzo9I | GATC | 2 cut(s) | 21, 131 |
| LweI | GCATC | 1 cut(s) | 73 |
| MalI | GATC | 2 cut(s) | 23, 133 |
| MboI | GATC | 2 cut(s) | 21, 131 |
| MflI | RGATCY | 2 cut(s) | 21, 131 |
| MluCI | AATT | 1 cut(s) | 63 |
| MroXI | GAANNNNTTC | 1 cut(s) | 119 |
| NdeII | GATC | 2 cut(s) | 21, 131 |
| PdmI | GAANNNNTTC | 1 cut(s) | 119 |
| PsuI | RGATCY | 2 cut(s) | 21, 131 |
| RsaI | GTAC | 1 cut(s) | 149 |
| RsaNI | GTAC | 1 cut(s) | 148 |
| Sau3AI | GATC | 2 cut(s) | 21, 131 |
| SfaNI | GCATC | 1 cut(s) | 73 |
| SfcI | CTRYAG | 2 cut(s) | 72, 124 |
| SgeI | CNNG | 1 cut(s) | 31 |
| Sse9I | AATT | 1 cut(s) | 63 |
| TaaI | ACNGT | 1 cut(s) | 112 |
| TaqI | TCGA | 1 cut(s) | 40 |
| TasI | AATT | 1 cut(s) | 63 |
| TatI | WGTACW | 1 cut(s) | 147 |
| TscAI | CASTG | 2 cut(s) | 117, 160 |
| TspRI | CASTG | 2 cut(s) | 117, 160 |
| XmnI | GAANNNNTTC | 1 cut(s) | 119 |