Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000324.1

Orthogroup ID

OG0015421

Physical Location & Seq

Genomic Coordinates Reverse (-)

29436 .. 35109

Gene Structure 5674 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1899 bp

atggcatactacggggacgctcaacttgtctcccgctccactttctccttcctctccttcaacaagcgccagccaccgcctgtctccagaagaaacaagcaaacaagaattttcatggagatgcacaaggttccacatgtactcaccgttgccggctccgattccggtgccggtgccggaatccaagcggaccttaaggcttgtgctgctcgcggagtctactgctccactgtcataactgctctcactgcacaaaacaccgttggtgttcagggtgtcgacattgtggctgaggattttgttgcagaacagctcaagtctgtgctatctgatatgcatgttgatgtcgtgaaaacaggcatgctaccttctttaggcatagtgaagattcttcatcaatgtctgaaggagtatccagttcgtgctttagtggttgatcctgttatggtatctacaagtggagatgtacttgctggtccttccattataactgggttcagagaggagctatttcctattgctgacattgtaaccccaaatctaaaagaggcatctgctttactggatggtcttaaaataaaaactgtttctgacatgcgttctgctgcaaaattactacatgatatgggcccacgaaatgtccttgttaaagggggagaccttcctgattcattggatgctgttgatatcttctttaatggtgaggacatatatgagctgcgctcttcacgcatagatactcgtaatactcacggtactggttgcactttggcatcatgtattgcagctgagctggcaaaaggctcgtcaatgcttgagtctgttaaggtaactccattggtgcttcttatattcgaagtcatgcagggagagtcagaaaaaatatatgtttctcttcttgtgtcaagtggatattctgatccagtattagagatacatgacgggctccatttggtgaatttaaatctagttgcggcttttagagagctagaagcaatgccttctggtccacgcatagatactcgtaatactcacggtactggttgcactttggcatcatgtattgcagctgagctggcaaaaggctcgtcaatgcttgagtctgttaaggtagcaaagtgctatgttgaaactgccttggattacagcaaagagattttcattggaaatggtccccaaggcccctttgatcacctaatgaggcttaagaataacattcacaagtctgctggacaagtcagattcaatccaagcgatctattcttgtatgctgtcacagattcagctatgaatagaaagtggggccatgcaatctcagatgctgttaaagctgctgtagaaggaggtgcgaccattgtccaactaagggaaaaggacattgaaacacgggatttcctagaagcagccaaatcatgtctccagatttgtcgttcccatggagttcctttactaataaatgatcggattgatgttgcacttgcttgtgatgctgatggtgtgcatattgggcagtcagacatgccaacccatgttgcacgtgctctacttggccctgagaagatcattggtgtatcttgcaagacacctgagcatgcagaacaagcatggattgctggtgccaattacattggttgcggcggtgtatatccaactaatacaaaggcaaacaatctcactattggcttggaagggctgaaaacggtttgtttggcttctaaattacccgtggtagcaatcggtgggatcaatacttcaaatgcacaatcggtgatgcaaattggtgtaccaaacctgaagggtgttgctgttgtgtcggctctgtttgatagggaatgtgtgttgacagaagccaagaagttgcgcacactgctaatggaggcaacacaagtgatgaagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004789 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008902 GO:0008972 GO:0009058 GO:0009110 GO:0009228 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016765 GO:0016772 GO:0016773 GO:0016776 GO:0017144 GO:0018130 GO:0019438 GO:0034641 GO:0042364 GO:0042723 GO:0042724 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0072527 GO:0072528 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00730 ko01100 map00730 map01100

Pfam Domains

Protein Families

Phos_pyr_kin TMP-TENI

Protein Analysis

632

Amino Acids

67.64

Weight (kDa)

6.26

Isoelectric Point (pI)

35.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phos_pyr_kin	PF08543	54 - 276	5.1e-82	Phosphomethylpyrimidine kinase
PfkB	PF00294	168 - 276	9.6e-06	pfkB family carbohydrate kinase
Phos_pyr_kin	PF08543	335 - 392	3.4e-16	Phosphomethylpyrimidine kinase
TMP-TENI	PF02581	422 - 607	1.1e-63	Thiamine monophosphate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015421)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22940
fragaria_vesca	FvH4_5g28860 FvH4_5g28860
malus_domestica	MD15G1428400.v1.1
prunus_persica	Prupe.1G573200_v2.0.a1 Prupe.1G573200_v2.0.a1 Prupe.1G573200_v2.0.a1
pyrus_communis	pycom15g37940
rosa_chinensis	RchiOBHm_Chr7g0221201
rosa_laevigata	RLG00000002172
rosa_multiflora	Rmu_sc0000324.1_g000006
rosa_roxburghii	Rroxscaffold_3G00238610
rosa_rugosa	Rorug07G0201100
rosa_samantha	Rh7AG340000 Rh7DG338700
rosa_wichuraiana	Rw7G028940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	488
Acc16I	TGCGCA	1 cut(s)	1862
AccB1I	GGYRCC	3 cut(s)	167, 173, 1616
AccBSI	CCGCTC	1 cut(s)	36
AccI	GTMKAC	2 cut(s)	219, 279
AccII	CGCG	1 cut(s)	213
AciI	CCGC	7 cut(s)	34, 77, 188, 213, 974, 1635, 1638
AclWI	GGATC	3 cut(s)	431, 914, 1751
AcsI	RAATTY	2 cut(s)	108, 958
AcuI	CTGAAG	2 cut(s)	425, 1814
AcvI	CACGTG	1 cut(s)	1538
AfaI	GTAC	5 cut(s)	141, 468, 757, 1039, 1785
AfiI	CCNNNNNNNGG	2 cut(s)	374, 1366
AflII	CTTAAG	2 cut(s)	194, 1205
AflIII	ACRYGT	1 cut(s)	136
AgsI	TTSAA	5 cut(s)	61, 1130, 1246, 1382, 1755
Alw21I	GWGCWC	1 cut(s)	1543
Alw26I	GTCTC	4 cut(s)	34, 88, 651, 1421
AlwI	GGATC	3 cut(s)	431, 914, 1751
AlwNI	CAGNNNCTG	1 cut(s)	1322
AoxI	GGCC	4 cut(s)	628, 1180, 1303, 1549
ApaI	GGGCCC	1 cut(s)	632
ApeKI	GCWGC	7 cut(s)	206, 605, 718, 785, 1067, 1331, 1403
ApoI	RAATTY	2 cut(s)	108, 958
ArsI	GACNNNNNNTTYG	4 cut(s)	791, 823, 1073, 1105
AspLEI	GCGC	3 cut(s)	69, 723, 1863
AspS9I	GGNCC	9 cut(s)	190, 476, 628, 629, 1007, 1172, 1181, 1303, 1550
AsuHPI	GGTGA	5 cut(s)	136, 713, 967, 1184, 1780
AsuII	TTCGAA	1 cut(s)	855
AvaII	GGWCC	4 cut(s)	190, 476, 1007, 1172
BaeGI	GKGCMC	1 cut(s)	632
BanI	GGYRCC	3 cut(s)	167, 173, 1616
BanII	GRGCYC	2 cut(s)	632, 948
BbrPI	CACGTG	1 cut(s)	1538
Bbv12I	GWGCWC	1 cut(s)	1543
BbvCI	CCTCAGC	1 cut(s)	291
BbvI	GCAGC	7 cut(s)	193, 592, 705, 797, 1079, 1318, 1415
BccI	CCATC	2 cut(s)	560, 1487
BcgI	CGANNNNNNTGC	6 cut(s)	149, 183, 786, 820, 1068, 1102
BciVI	GTATCC	1 cut(s)	423
BclI	TGATCA	1 cut(s)	1189
BcoDI	GTCTC	4 cut(s)	34, 88, 651, 1421
BfaI	CTAG	3 cut(s)	968, 989, 1397
BfmI	CTRYAG	1 cut(s)	1335
BfoI	RGCGCY	1 cut(s)	70
BfrI	CTTAAG	2 cut(s)	194, 1205
BfuI	GTATCC	1 cut(s)	423
BisI	GCNGC	9 cut(s)	207, 606, 719, 786, 975, 1068, 1332, 1404, 1636
BlpI	GCTNAGC	2 cut(s)	789, 1071
BlsI	GCNGC	9 cut(s)	208, 607, 720, 787, 976, 1069, 1333, 1405, 1637
Bme18I	GGWCC	4 cut(s)	190, 476, 1007, 1172
BmgT120I	GGNCC	9 cut(s)	190, 476, 628, 629, 1007, 1172, 1181, 1303, 1550
BmrI	ACTGGG	1 cut(s)	501
BmsI	GCATC	8 cut(s)	111, 560, 667, 782, 1064, 1309, 1477, 1761
BmuI	ACTGGG	1 cut(s)	501
BoxI	GACNNNNGTC	1 cut(s)	1355
BplI	GAGNNNNNCTC	2 cut(s)	707, 739
BpmI	CTGGAG	2 cut(s)	70, 1403
Bpu10I	CCTNAGC	2 cut(s)	291, 1587
Bpu1102I	GCTNAGC	2 cut(s)	789, 1071
Bpu14I	TTCGAA	1 cut(s)	855
BpuEI	CTTGAG	3 cut(s)	299, 836, 1118
BsaAI	YACGTR	1 cut(s)	1538
BsaI	GGTCTC	1 cut(s)	651
BsaJI	CCNNGG	4 cut(s)	1137, 1177, 1435, 1725
BsaWI	WCCGGW	1 cut(s)	164
Bsc4I	CCNNNNNNNGG	2 cut(s)	374, 1366
Bse118I	RCCGGY	2 cut(s)	152, 170
Bse1I	ACTGG	6 cut(s)	416, 496, 567, 763, 923, 1045
Bse3DI	GCAATG	1 cut(s)	1002
BseDI	CCNNGG	4 cut(s)	1137, 1177, 1435, 1725
BseGI	GGATG	2 cut(s)	571, 682
BseLI	CCNNNNNNNGG	2 cut(s)	374, 1366
BseMI	GCAATG	1 cut(s)	1002
BseMII	CTCAG	6 cut(s)	282, 780, 1062, 1329, 1545, 1578
BseNI	ACTGG	6 cut(s)	416, 496, 567, 763, 923, 1045
BseRI	GAGGAG	1 cut(s)	518
BseSI	GKGCMC	1 cut(s)	632
BseXI	GCAGC	7 cut(s)	193, 592, 705, 797, 1079, 1318, 1415
BsgI	GTGCAG	1 cut(s)	234
Bsh1236I	CGCG	1 cut(s)	213
BshFI	GGCC	4 cut(s)	630, 1182, 1305, 1551
BshNI	GGYRCC	3 cut(s)	167, 173, 1616
BsiHKAI	GWGCWC	1 cut(s)	1543
BsiSI	CCGG	4 cut(s)	153, 165, 171, 177
BslFI	GGGAC	2 cut(s)	29, 1158
BslI	CCNNNNNNNGG	2 cut(s)	374, 1366
BsmAI	GTCTC	4 cut(s)	34, 88, 651, 1421
BsmFI	GGGAC	2 cut(s)	29, 1158
BsnI	GGCC	4 cut(s)	630, 1182, 1305, 1551
Bso31I	GGTCTC	1 cut(s)	651
Bsp119I	TTCGAA	1 cut(s)	855
Bsp120I	GGGCCC	1 cut(s)	628
Bsp1286I	GDGCHC	3 cut(s)	632, 948, 1543
Bsp143I	GATC	7 cut(s)	436, 919, 1189, 1255, 1459, 1560, 1743
Bsp1720I	GCTNAGC	2 cut(s)	789, 1071
Bsp19I	CCATGG	1 cut(s)	1435
BspACI	CCGC	7 cut(s)	34, 77, 188, 213, 974, 1635, 1638
BspANI	GGCC	4 cut(s)	630, 1182, 1305, 1551
BspCNI	CTCAG	6 cut(s)	283, 781, 1063, 1328, 1546, 1579
BspFNI	CGCG	1 cut(s)	213
BspPI	GGATC	3 cut(s)	431, 914, 1751
BspQI	GCTCTTC	1 cut(s)	730
BspT104I	TTCGAA	1 cut(s)	855
BspT107I	GGYRCC	3 cut(s)	167, 173, 1616
BspTI	CTTAAG	2 cut(s)	194, 1205
BspTNI	GGTCTC	1 cut(s)	651
BsrBI	CCGCTC	1 cut(s)	36
BsrDI	GCAATG	1 cut(s)	1002
BsrFI	RCCGGY	2 cut(s)	152, 170
BsrI	ACTGG	6 cut(s)	416, 496, 567, 763, 923, 1045
BssAI	RCCGGY	2 cut(s)	152, 170
BssECI	CCNNGG	4 cut(s)	1137, 1177, 1435, 1725
BssMI	GATC	7 cut(s)	436, 919, 1189, 1255, 1459, 1560, 1743
BssT1I	CCWWGG	3 cut(s)	1137, 1177, 1435
Bst4CI	ACNGT	7 cut(s)	148, 232, 262, 586, 755, 1037, 1702
Bst6I	CTCTTC	2 cut(s)	730, 900
BstAFI	CTTAAG	2 cut(s)	194, 1205
BstAPI	GCANNNNNTGC	1 cut(s)	1610
BstBAI	YACGTR	1 cut(s)	1538
BstBI	TTCGAA	1 cut(s)	855
BstC8I	GCNNGC	7 cut(s)	71, 154, 211, 362, 795, 1077, 1593
BstDEI	CTNAG	7 cut(s)	291, 789, 1071, 1315, 1364, 1554, 1587
BstDSI	CCRYGG	2 cut(s)	1435, 1725
BstENI	CCTNNNNNAGG	1 cut(s)	372
BstF5I	GGATG	2 cut(s)	571, 682
BstFNI	CGCG	1 cut(s)	213
BstH2I	RGCGCY	1 cut(s)	70
BstHHI	GCGC	3 cut(s)	69, 723, 1863
BstKTI	GATC	7 cut(s)	439, 922, 1192, 1258, 1462, 1563, 1746
BstMAI	GTCTC	4 cut(s)	34, 88, 651, 1421
BstMBI	GATC	7 cut(s)	436, 919, 1189, 1255, 1459, 1560, 1743
BstNSI	RCATGY	6 cut(s)	140, 341, 364, 598, 1522, 1595
BstPAI	GACNNNNGTC	1 cut(s)	1355
BstSFI	CTRYAG	1 cut(s)	1335
BstSLI	GKGCMC	1 cut(s)	632
BstUI	CGCG	1 cut(s)	213
BstV1I	GCAGC	7 cut(s)	193, 592, 705, 797, 1079, 1318, 1415
BsuI	GTATCC	1 cut(s)	423
BsuRI	GGCC	4 cut(s)	630, 1182, 1305, 1551
BtgI	CCRYGG	2 cut(s)	1435, 1725
BtsCI	GGATG	2 cut(s)	571, 682
BtsI	GCAGTG	2 cut(s)	246, 1865
BtsIMutI	CAGTG	3 cut(s)	228, 246, 1865
Cac8I	GCNNGC	7 cut(s)	71, 154, 211, 362, 795, 1077, 1593
CaiI	CAGNNNCTG	1 cut(s)	1322
CfoI	GCGC	3 cut(s)	69, 723, 1863
Cfr10I	RCCGGY	2 cut(s)	152, 170
Cfr13I	GGNCC	9 cut(s)	190, 476, 628, 629, 1007, 1172, 1181, 1303, 1550
CseI	GACGC	1 cut(s)	26
Csp6I	GTAC	5 cut(s)	140, 467, 756, 1038, 1784
CviQI	GTAC	5 cut(s)	140, 467, 756, 1038, 1784
DdeI	CTNAG	7 cut(s)	291, 789, 1071, 1315, 1364, 1554, 1587
DpnI	GATC	7 cut(s)	438, 921, 1191, 1257, 1461, 1562, 1745
DpnII	GATC	7 cut(s)	436, 919, 1189, 1255, 1459, 1560, 1743
DraI	TTTAAA	1 cut(s)	963
Eam1104I	CTCTTC	2 cut(s)	730, 900
EarI	CTCTTC	2 cut(s)	730, 900
Eco130I	CCWWGG	3 cut(s)	1137, 1177, 1435
Eco24I	GRGCYC	2 cut(s)	632, 948
Eco31I	GGTCTC	1 cut(s)	651
Eco32I	GATATC	1 cut(s)	688
Eco47I	GGWCC	4 cut(s)	190, 476, 1007, 1172
Eco57I	CTGAAG	2 cut(s)	425, 1814
Eco72I	CACGTG	1 cut(s)	1538
EcoNI	CCTNNNNNAGG	1 cut(s)	372
EcoO109I	RGGNCCY	1 cut(s)	1181
EcoRV	GATATC	1 cut(s)	688
EcoT14I	CCWWGG	3 cut(s)	1137, 1177, 1435
EcoT22I	ATGCAT	1 cut(s)	339
EcoT38I	GRGCYC	2 cut(s)	632, 948
ErhI	CCWWGG	3 cut(s)	1137, 1177, 1435
FalI	AAGNNNNNCTT	2 cut(s)	177, 209
FaqI	GGGAC	2 cut(s)	29, 1158
FauI	CCCGC	1 cut(s)	41
FbaI	TGATCA	1 cut(s)	1189
FblI	GTMKAC	2 cut(s)	219, 279
Fnu4HI	GCNGC	9 cut(s)	207, 606, 719, 786, 975, 1068, 1332, 1404, 1636
FokI	GGATG	2 cut(s)	578, 689
FriOI	GRGCYC	2 cut(s)	632, 948
Fsp4HI	GCNGC	9 cut(s)	207, 606, 719, 786, 975, 1068, 1332, 1404, 1636
FspBI	CTAG	3 cut(s)	968, 989, 1397
FspI	TGCGCA	1 cut(s)	1862
GlaI	GCGC	3 cut(s)	68, 722, 1862
GluI	GCNGC	9 cut(s)	207, 606, 719, 786, 975, 1068, 1332, 1404, 1636
GsuI	CTGGAG	2 cut(s)	70, 1403
HaeII	RGCGCY	1 cut(s)	70
HaeIII	GGCC	4 cut(s)	630, 1182, 1305, 1551
HapII	CCGG	4 cut(s)	153, 165, 171, 177
HgaI	GACGC	1 cut(s)	26
HhaI	GCGC	3 cut(s)	69, 723, 1863
Hin6I	GCGC	3 cut(s)	67, 721, 1861
HinP1I	GCGC	3 cut(s)	67, 721, 1861
HincII	GTYRAC	2 cut(s)	280, 1842
HindII	GTYRAC	2 cut(s)	280, 1842
HpaII	CCGG	4 cut(s)	153, 165, 171, 177
HphI	GGTGA	5 cut(s)	136, 713, 967, 1184, 1780
Hpy166II	GTNNAC	5 cut(s)	220, 280, 1010, 1784, 1842
Hpy188III	TCNNGA	4 cut(s)	87, 349, 665, 1420
Hpy8I	GTNNAC	5 cut(s)	220, 280, 1010, 1784, 1842
HpyCH4III	ACNGT	7 cut(s)	148, 232, 262, 586, 755, 1037, 1702
HpyCH4IV	ACGT	1 cut(s)	1537
HpyF3I	CTNAG	7 cut(s)	291, 789, 1071, 1315, 1364, 1554, 1587
HpySE526I	ACGT	1 cut(s)	1537
HspAI	GCGC	3 cut(s)	67, 721, 1861
KroI	GCCGGC	1 cut(s)	152
KroNI	GCCGGC	1 cut(s)	154
Ksp22I	TGATCA	1 cut(s)	1189
Kzo9I	GATC	7 cut(s)	436, 919, 1189, 1255, 1459, 1560, 1743
LguI	GCTCTTC	1 cut(s)	730
LmnI	GCTCC	5 cut(s)	41, 161, 230, 505, 951
Lsp1109I	GCAGC	7 cut(s)	193, 592, 705, 797, 1079, 1318, 1415
LweI	GCATC	8 cut(s)	111, 560, 667, 782, 1064, 1309, 1477, 1761
MaeI	CTAG	3 cut(s)	968, 989, 1397
MaeII	ACGT	1 cut(s)	1537
MaeIII	GTNAC	3 cut(s)	529, 829, 1273
MalI	GATC	7 cut(s)	438, 921, 1191, 1257, 1461, 1562, 1745
MbiI	CCGCTC	1 cut(s)	36
MboI	GATC	7 cut(s)	436, 919, 1189, 1255, 1459, 1560, 1743
MboII	GAAGA	7 cut(s)	102, 383, 397, 682, 717, 887, 1570
MhlI	GDGCHC	3 cut(s)	632, 948, 1543
MluCI	AATT	6 cut(s)	108, 611, 958, 1621, 1718, 1776
MlyI	GAGTC	4 cut(s)	225, 827, 881, 1109
MmeI	TCCRAC	2 cut(s)	1384, 1673
MnlI	CCTC	8 cut(s)	62, 286, 496, 541, 697, 1194, 1337, 1870
Mph1103I	ATGCAT	1 cut(s)	339
MroNI	GCCGGC	1 cut(s)	152
MseI	TTAA	9 cut(s)	195, 573, 648, 696, 825, 962, 1107, 1206, 1326
MslI	CAYNNNNRTG	2 cut(s)	119, 342
MspA1I	CMGCKG	2 cut(s)	788, 1070
MspCI	CTTAAG	2 cut(s)	194, 1205
MspI	CCGG	4 cut(s)	153, 165, 171, 177
MvnI	CGCG	1 cut(s)	213
NaeI	GCCGGC	1 cut(s)	154
NcoI	CCATGG	1 cut(s)	1435
NdeII	GATC	7 cut(s)	436, 919, 1189, 1255, 1459, 1560, 1743
NgoMIV	GCCGGC	1 cut(s)	152
NmuCI	GTSAC	1 cut(s)	1273
NsbI	TGCGCA	1 cut(s)	1862
NsiI	ATGCAT	1 cut(s)	339
NspI	RCATGY	6 cut(s)	140, 341, 364, 598, 1522, 1595
NspV	TTCGAA	1 cut(s)	855
PaeI	GCATGC	2 cut(s)	364, 1595
PciI	ACATGT	1 cut(s)	136
PciSI	GCTCTTC	1 cut(s)	730
PdiI	GCCGGC	1 cut(s)	154
PfeI	GAWTC	6 cut(s)	161, 180, 388, 668, 1242, 1280
PkrI	GCNGC	9 cut(s)	208, 607, 720, 787, 976, 1069, 1333, 1405, 1637
PleI	GAGTC	4 cut(s)	224, 826, 880, 1108
PmaCI	CACGTG	1 cut(s)	1538
PmlI	CACGTG	1 cut(s)	1538
PpsI	GAGTC	4 cut(s)	224, 826, 880, 1108
Ppu21I	YACGTR	1 cut(s)	1538
PscI	ACATGT	1 cut(s)	136
PshAI	GACNNNNGTC	1 cut(s)	1355
PsiI	TTATAA	1 cut(s)	488
PspCI	CACGTG	1 cut(s)	1538
PspOMI	GGGCCC	1 cut(s)	628
PspPI	GGNCC	9 cut(s)	190, 476, 628, 629, 1007, 1172, 1181, 1303, 1550
PstNI	CAGNNNCTG	1 cut(s)	1322
PvuII	CAGCTG	2 cut(s)	788, 1070
RsaI	GTAC	5 cut(s)	141, 468, 757, 1039, 1785
RsaNI	GTAC	5 cut(s)	140, 467, 756, 1038, 1784
RseI	CAYNNNNRTG	2 cut(s)	119, 342
SalI	GTCGAC	1 cut(s)	278
SapI	GCTCTTC	1 cut(s)	730
SaqAI	TTAA	9 cut(s)	195, 573, 648, 696, 825, 962, 1107, 1206, 1326
SatI	GCNGC	9 cut(s)	207, 606, 719, 786, 975, 1068, 1332, 1404, 1636
Sau3AI	GATC	7 cut(s)	436, 919, 1189, 1255, 1459, 1560, 1743
Sau96I	GGNCC	9 cut(s)	190, 476, 628, 629, 1007, 1172, 1181, 1303, 1550
SchI	GAGTC	4 cut(s)	225, 827, 881, 1109
SduI	GDGCHC	3 cut(s)	632, 948, 1543
SfaNI	GCATC	8 cut(s)	111, 560, 667, 782, 1064, 1309, 1477, 1761
SfcI	CTRYAG	1 cut(s)	1335
SfuI	TTCGAA	1 cut(s)	855
SinI	GGWCC	4 cut(s)	190, 476, 1007, 1172
SmiI	ATTTAAAT	1 cut(s)	963
SmiMI	CAYNNNNRTG	2 cut(s)	119, 342
SmlI	CTYRAG	5 cut(s)	194, 314, 815, 1097, 1205
SmoI	CTYRAG	5 cut(s)	194, 314, 815, 1097, 1205
SphI	GCATGC	2 cut(s)	364, 1595
Sse9I	AATT	6 cut(s)	108, 611, 958, 1621, 1718, 1776
SsiI	CCGC	7 cut(s)	34, 77, 188, 213, 974, 1635, 1638
SspMI	CTAG	3 cut(s)	968, 989, 1397
StyI	CCWWGG	3 cut(s)	1137, 1177, 1435
SwaI	ATTTAAAT	1 cut(s)	963
TaaI	ACNGT	7 cut(s)	148, 232, 262, 586, 755, 1037, 1702
TaiI	ACGT	1 cut(s)	1540
TaqI	TCGA	2 cut(s)	279, 855
TasI	AATT	6 cut(s)	108, 611, 958, 1621, 1718, 1776
TatI	WGTACW	2 cut(s)	139, 466
TauI	GCSGC	2 cut(s)	977, 1638
TfiI	GAWTC	6 cut(s)	161, 180, 388, 668, 1242, 1280
Tru1I	TTAA	9 cut(s)	195, 573, 648, 696, 825, 962, 1107, 1206, 1326
Tru9I	TTAA	9 cut(s)	195, 573, 648, 696, 825, 962, 1107, 1206, 1326
TscAI	CASTG	3 cut(s)	235, 253, 1872
TseFI	GTSAC	1 cut(s)	1273
TseI	GCWGC	7 cut(s)	206, 605, 718, 785, 1067, 1331, 1403
Tsp45I	GTSAC	1 cut(s)	1273
TspDTI	ATGAA	5 cut(s)	103, 383, 660, 1150, 1304
TspRI	CASTG	3 cut(s)	235, 253, 1872
Vha464I	CTTAAG	2 cut(s)	194, 1205
VpaK11BI	GGWCC	4 cut(s)	190, 476, 1007, 1172
XagI	CCTNNNNNAGG	1 cut(s)	372
XapI	RAATTY	2 cut(s)	108, 958
XceI	RCATGY	6 cut(s)	140, 341, 364, 598, 1522, 1595
XmiI	GTMKAC	2 cut(s)	219, 279
XspI	CTAG	3 cut(s)	968, 989, 1397
Zsp2I	ATGCAT	1 cut(s)	339

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.