Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0015421

Physical Location & Seq

Genomic Coordinates Reverse (-)

44603583 .. 44608863

Gene Structure 5281 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG338700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1623 bp

ATGTTGATGGCATACTACGGGGACGCTCAACTTGTCTCCCGCACCACTTTCTCCTTCCTCTCCTTCAACAAGCGCCAGCCACCGCCTGTCTCCAGAAGAAACAAGCAAACAAGAATTTTCATGGAGATGCACAAGGTTCCACATGTACTCACCGTTGCCGGCTCCGATTCCGGTGCCGGTGCCGGAATCCAAGCGGACCTTAAGGCTTGTGCTGCTCGCGGAGTCTACTGCTCCACTGTCATAACTGCTCTCACTGCACAAAACACCGTTGGTGTTCAGGGTGTCGACATTGTGGCTGAGGATTTTGTTGCAGAACAGCTCAAGTCTGTGCTCTCTGATATGCATGTTGATGTCGTGAAAACAGGCATGCTACCTTCTTTAGGCATAGTGAAGATTCTTCATCAATGTCTGAAGGAGTATCCAGTTCGTGCTTTAGTGGTTGATCCTGTTATGGTATCTACAAGTGGAGATGTACTCGCTGGTCCTTCCATTATAACTGGGTTCAGAGAGGAGCTATTTCCTATTGCTGACATTGTAACCCCAAATCTAAAAGAGGCATCTGCTTTACTGGATGGTCTTAAAATAAAAACTGTTTCTGACATGCGTTCTGCTGCAAAATTACTACATGATATGGGCCCACGAAATGTCCTTGTTAAAGGGGGAGACCTTCCTGATTCATTGGATGCTGTTGATATCTTCTTTAATGGTGAGGACATATATGAGCTGCGCTCTTCACGCATAGATACTCGTAATACTCACGGTACTGGTTGCACTTTGGCATCGTGTATTGCAGCTGAGCTGGCAAAAGGCTCGTCAATGCTTGAGTCTGTTAAGGTAGCAAAGTGCTATGTTGAAACTGCCTTGGATTACAGCAAAGAGATTTTCATTGGAAATGGTCCCCAAGGCCCCTTTGATCACCTAATGAGGCTTAAGAATAACATTCACAAGTCTGCTGGACAAGTCAGATTCAATCCAAGCGATCTATTCTTGTATGCTGTCACAGATTCAGCTATGAATAGAATGTGGGGCCATGCAATCTCAGATGCTGTTAAAGCTGCTGTAGAAGGAGGTGCGACCATTGTCCAACTAAGGGAAAAGGACATTGAAACACGGGATTTCCTAGAAGCAGCCAAATCATGTCTCCAGATTTGTCGTTCCCATGGAGTTCCTTTACTAATAAATGATAGGATTGATGTTGCACTTGCTTGTGATGCTGATGGTGTGCATATTGGGCAGTCAGACATGCCAACCCATGTTGCACGTGCTCTACTTGGCCCTGAGAAGATCATTGGTGTATCTTGCAAGACACCTGAGCATGCAGAACAAGCATGGATTGCTGGTGCCAATTACATTGGTTGCGGCGGTGTATATCCAACTAATACAAAGGCAAACAATCTCACCATTGGCTTGGAAGGGCTGAAAACGGTTTGTTTGGCTTCTAAATTACCCGTGGTAGCAATCGGTGGGATCAATACTTCAAATGCACAATCGGTGATGCAAATTGGTGTACCAAACCTGAAGGGTGTTGCTGTTGTGTCGGCTCTGTTTGATAGGGAATGTGTGTTGACAGAAACCAAGAAGTTGCGCACACTGCTAATGGAGGCAACACAAGTGATGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004789 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006725 GO:0006766 GO:0006767 GO:0006772 GO:0006790 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008902 GO:0008972 GO:0009058 GO:0009110 GO:0009228 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016765 GO:0016772 GO:0016773 GO:0016776 GO:0017144 GO:0018130 GO:0019438 GO:0034641 GO:0042364 GO:0042723 GO:0042724 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044271 GO:0044272 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0071704 GO:0072527 GO:0072528 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00730 ko01100 map00730 map01100

Pfam Domains

Protein Families

Phos_pyr_kin TMP-TENI

Protein Analysis

540

Amino Acids

57.89

Weight (kDa)

6.67

Isoelectric Point (pI)

35.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Phos_pyr_kin	PF08543	56 - 300	1.4e-87	Phosphomethylpyrimidine kinase
PfkB	PF00294	170 - 280	1.4e-06	pfkB family carbohydrate kinase
TMP-TENI	PF02581	330 - 515	7.8e-64	Thiamine monophosphate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015421)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22940
fragaria_vesca	FvH4_5g28860 FvH4_5g28860
malus_domestica	MD15G1428400.v1.1
prunus_persica	Prupe.1G573200_v2.0.a1 Prupe.1G573200_v2.0.a1 Prupe.1G573200_v2.0.a1
pyrus_communis	pycom15g37940
rosa_chinensis	RchiOBHm_Chr7g0221201
rosa_laevigata	RLG00000002172
rosa_multiflora	Rmu_sc0000324.1_g000006
rosa_roxburghii	Rroxscaffold_3G00238610
rosa_rugosa	Rorug07G0201100
rosa_samantha	Rh7AG340000 Rh7DG338700
rosa_wichuraiana	Rw7G028940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	494
Acc16I	TGCGCA	1 cut(s)	1586
AccB1I	GGYRCC	3 cut(s)	173, 179, 1340
AccI	GTMKAC	2 cut(s)	225, 285
AccII	CGCG	1 cut(s)	219
AciI	CCGC	6 cut(s)	40, 83, 194, 219, 1359, 1362
AclWI	GGATC	2 cut(s)	437, 1475
AcsI	RAATTY	1 cut(s)	114
AcuI	CTGAAG	2 cut(s)	431, 1538
AcvI	CACGTG	1 cut(s)	1262
AfaI	GTAC	4 cut(s)	147, 474, 763, 1509
AfiI	CCNNNNNNNGG	2 cut(s)	380, 1090
AflII	CTTAAG	2 cut(s)	200, 929
AflIII	ACRYGT	1 cut(s)	142
AgsI	TTSAA	5 cut(s)	67, 854, 970, 1106, 1479
AluBI	AGCT	7 cut(s)	319, 514, 724, 794, 799, 1010, 1055
AluI	AGCT	7 cut(s)	319, 514, 724, 794, 799, 1010, 1055
Alw21I	GWGCWC	2 cut(s)	333, 1267
Alw26I	GTCTC	4 cut(s)	40, 94, 657, 1145
AlwI	GGATC	2 cut(s)	437, 1475
AlwNI	CAGNNNCTG	1 cut(s)	1046
AoxI	GGCC	4 cut(s)	634, 904, 1027, 1273
ApaI	GGGCCC	1 cut(s)	638
ApeKI	GCWGC	6 cut(s)	212, 611, 724, 791, 1055, 1127
ApoI	RAATTY	1 cut(s)	114
ArsI	GACNNNNNNTTYG	2 cut(s)	797, 829
AspLEI	GCGC	3 cut(s)	75, 729, 1587
AspS9I	GGNCC	8 cut(s)	196, 482, 634, 635, 896, 905, 1027, 1274
AsuHPI	GGTGA	5 cut(s)	142, 719, 908, 1390, 1504
AvaII	GGWCC	3 cut(s)	196, 482, 896
BaeGI	GKGCMC	1 cut(s)	638
BanI	GGYRCC	3 cut(s)	173, 179, 1340
BanII	GRGCYC	1 cut(s)	638
BbrPI	CACGTG	1 cut(s)	1262
Bbv12I	GWGCWC	2 cut(s)	333, 1267
BbvCI	CCTCAGC	1 cut(s)	297
BbvI	GCAGC	6 cut(s)	199, 598, 711, 803, 1042, 1139
BccI	CCATC	2 cut(s)	566, 1211
BcgI	CGANNNNNNTGC	4 cut(s)	155, 189, 792, 826
BciVI	GTATCC	1 cut(s)	429
BclI	TGATCA	1 cut(s)	913
BcoDI	GTCTC	4 cut(s)	40, 94, 657, 1145
BfaI	CTAG	1 cut(s)	1121
BfmI	CTRYAG	1 cut(s)	1059
BfoI	RGCGCY	1 cut(s)	76
BfrI	CTTAAG	2 cut(s)	200, 929
BfuI	GTATCC	1 cut(s)	429
BisI	GCNGC	7 cut(s)	213, 612, 725, 792, 1056, 1128, 1360
BlpI	GCTNAGC	1 cut(s)	795
BlsI	GCNGC	7 cut(s)	214, 613, 726, 793, 1057, 1129, 1361
Bme18I	GGWCC	3 cut(s)	196, 482, 896
BmgT120I	GGNCC	8 cut(s)	196, 482, 634, 635, 896, 905, 1027, 1274
BmiI	GGNNCC	9 cut(s)	138, 163, 175, 181, 636, 898, 907, 1028, 1342
BmrI	ACTGGG	1 cut(s)	507
BmsI	GCATC	7 cut(s)	117, 566, 673, 788, 1033, 1201, 1485
BmuI	ACTGGG	1 cut(s)	507
BoxI	GACNNNNGTC	1 cut(s)	1079
BplI	GAGNNNNNCTC	4 cut(s)	459, 491, 713, 745
BpmI	CTGGAG	2 cut(s)	76, 1127
Bpu10I	CCTNAGC	2 cut(s)	297, 1311
Bpu1102I	GCTNAGC	1 cut(s)	795
BpuEI	CTTGAG	2 cut(s)	305, 842
BsaAI	YACGTR	1 cut(s)	1262
BsaI	GGTCTC	1 cut(s)	657
BsaJI	CCNNGG	4 cut(s)	861, 901, 1159, 1449
BsaWI	WCCGGW	1 cut(s)	170
Bsc4I	CCNNNNNNNGG	2 cut(s)	380, 1090
Bse118I	RCCGGY	2 cut(s)	158, 176
Bse1I	ACTGG	4 cut(s)	422, 502, 573, 769
BseDI	CCNNGG	4 cut(s)	861, 901, 1159, 1449
BseGI	GGATG	2 cut(s)	577, 688
BseLI	CCNNNNNNNGG	2 cut(s)	380, 1090
BseMII	CTCAG	5 cut(s)	288, 786, 1053, 1269, 1302
BseNI	ACTGG	4 cut(s)	422, 502, 573, 769
BseRI	GAGGAG	1 cut(s)	524
BseSI	GKGCMC	1 cut(s)	638
BseXI	GCAGC	6 cut(s)	199, 598, 711, 803, 1042, 1139
BsgI	GTGCAG	1 cut(s)	240
Bsh1236I	CGCG	1 cut(s)	219
BshFI	GGCC	4 cut(s)	636, 906, 1029, 1275
BshNI	GGYRCC	3 cut(s)	173, 179, 1340
BsiHKAI	GWGCWC	2 cut(s)	333, 1267
BsiSI	CCGG	4 cut(s)	159, 171, 177, 183
BslFI	GGGAC	2 cut(s)	35, 882
BslI	CCNNNNNNNGG	2 cut(s)	380, 1090
BsmAI	GTCTC	4 cut(s)	40, 94, 657, 1145
BsmFI	GGGAC	2 cut(s)	35, 882
BsnI	GGCC	4 cut(s)	636, 906, 1029, 1275
Bso31I	GGTCTC	1 cut(s)	657
Bsp120I	GGGCCC	1 cut(s)	634
Bsp1286I	GDGCHC	3 cut(s)	333, 638, 1267
Bsp143I	GATC	5 cut(s)	442, 913, 979, 1284, 1467
Bsp1720I	GCTNAGC	1 cut(s)	795
Bsp19I	CCATGG	1 cut(s)	1159
BspACI	CCGC	6 cut(s)	40, 83, 194, 219, 1359, 1362
BspANI	GGCC	4 cut(s)	636, 906, 1029, 1275
BspCNI	CTCAG	5 cut(s)	289, 787, 1052, 1270, 1303
BspFNI	CGCG	1 cut(s)	219
BspLI	GGNNCC	9 cut(s)	138, 163, 175, 181, 636, 898, 907, 1028, 1342
BspPI	GGATC	2 cut(s)	437, 1475
BspQI	GCTCTTC	1 cut(s)	736
BspT107I	GGYRCC	3 cut(s)	173, 179, 1340
BspTI	CTTAAG	2 cut(s)	200, 929
BspTNI	GGTCTC	1 cut(s)	657
BsrFI	RCCGGY	2 cut(s)	158, 176
BsrI	ACTGG	4 cut(s)	422, 502, 573, 769
BssAI	RCCGGY	2 cut(s)	158, 176
BssECI	CCNNGG	4 cut(s)	861, 901, 1159, 1449
BssMI	GATC	5 cut(s)	442, 913, 979, 1284, 1467
BssT1I	CCWWGG	3 cut(s)	861, 901, 1159
Bst4CI	ACNGT	6 cut(s)	154, 238, 268, 592, 761, 1426
Bst6I	CTCTTC	1 cut(s)	736
BstAFI	CTTAAG	2 cut(s)	200, 929
BstAPI	GCANNNNNTGC	1 cut(s)	1334
BstBAI	YACGTR	1 cut(s)	1262
BstC8I	GCNNGC	6 cut(s)	77, 160, 217, 368, 801, 1317
BstDEI	CTNAG	6 cut(s)	297, 795, 1039, 1088, 1278, 1311
BstDSI	CCRYGG	2 cut(s)	1159, 1449
BstENI	CCTNNNNNAGG	1 cut(s)	378
BstF5I	GGATG	2 cut(s)	577, 688
BstFNI	CGCG	1 cut(s)	219
BstH2I	RGCGCY	1 cut(s)	76
BstHHI	GCGC	3 cut(s)	75, 729, 1587
BstKTI	GATC	5 cut(s)	445, 916, 982, 1287, 1470
BstMAI	GTCTC	4 cut(s)	40, 94, 657, 1145
BstMBI	GATC	5 cut(s)	442, 913, 979, 1284, 1467
BstNSI	RCATGY	6 cut(s)	146, 347, 370, 604, 1246, 1319
BstPAI	GACNNNNGTC	1 cut(s)	1079
BstSFI	CTRYAG	1 cut(s)	1059
BstSLI	GKGCMC	1 cut(s)	638
BstUI	CGCG	1 cut(s)	219
BstV1I	GCAGC	6 cut(s)	199, 598, 711, 803, 1042, 1139
BstXI	CCANNNNNNTGG	1 cut(s)	1408
BsuI	GTATCC	1 cut(s)	429
BsuRI	GGCC	4 cut(s)	636, 906, 1029, 1275
BtgI	CCRYGG	2 cut(s)	1159, 1449
BtsCI	GGATG	2 cut(s)	577, 688
BtsI	GCAGTG	2 cut(s)	252, 1589
BtsIMutI	CAGTG	3 cut(s)	234, 252, 1589
Cac8I	GCNNGC	6 cut(s)	77, 160, 217, 368, 801, 1317
CaiI	CAGNNNCTG	1 cut(s)	1046
CfoI	GCGC	3 cut(s)	75, 729, 1587
Cfr10I	RCCGGY	2 cut(s)	158, 176
Cfr13I	GGNCC	8 cut(s)	196, 482, 634, 635, 896, 905, 1027, 1274
CseI	GACGC	1 cut(s)	32
Csp6I	GTAC	4 cut(s)	146, 473, 762, 1508
CviQI	GTAC	4 cut(s)	146, 473, 762, 1508
DdeI	CTNAG	6 cut(s)	297, 795, 1039, 1088, 1278, 1311
DpnI	GATC	5 cut(s)	444, 915, 981, 1286, 1469
DpnII	GATC	5 cut(s)	442, 913, 979, 1284, 1467
Eam1104I	CTCTTC	1 cut(s)	736
EarI	CTCTTC	1 cut(s)	736
Eco130I	CCWWGG	3 cut(s)	861, 901, 1159
Eco24I	GRGCYC	1 cut(s)	638
Eco31I	GGTCTC	1 cut(s)	657
Eco32I	GATATC	1 cut(s)	694
Eco47I	GGWCC	3 cut(s)	196, 482, 896
Eco57I	CTGAAG	2 cut(s)	431, 1538
Eco72I	CACGTG	1 cut(s)	1262
EcoNI	CCTNNNNNAGG	1 cut(s)	378
EcoO109I	RGGNCCY	1 cut(s)	905
EcoRV	GATATC	1 cut(s)	694
EcoT14I	CCWWGG	3 cut(s)	861, 901, 1159
EcoT22I	ATGCAT	1 cut(s)	345
EcoT38I	GRGCYC	1 cut(s)	638
ErhI	CCWWGG	3 cut(s)	861, 901, 1159
FalI	AAGNNNNNCTT	2 cut(s)	183, 215
FaqI	GGGAC	2 cut(s)	35, 882
FauI	CCCGC	1 cut(s)	47
FbaI	TGATCA	1 cut(s)	913
FblI	GTMKAC	2 cut(s)	225, 285
Fnu4HI	GCNGC	7 cut(s)	213, 612, 725, 792, 1056, 1128, 1360
FokI	GGATG	2 cut(s)	584, 695
FriOI	GRGCYC	1 cut(s)	638
Fsp4HI	GCNGC	7 cut(s)	213, 612, 725, 792, 1056, 1128, 1360
FspBI	CTAG	1 cut(s)	1121
FspI	TGCGCA	1 cut(s)	1586
GlaI	GCGC	3 cut(s)	74, 728, 1586
GluI	GCNGC	7 cut(s)	213, 612, 725, 792, 1056, 1128, 1360
GsuI	CTGGAG	2 cut(s)	76, 1127
HaeII	RGCGCY	1 cut(s)	76
HaeIII	GGCC	4 cut(s)	636, 906, 1029, 1275
HapII	CCGG	4 cut(s)	159, 171, 177, 183
HgaI	GACGC	1 cut(s)	32
HhaI	GCGC	3 cut(s)	75, 729, 1587
Hin6I	GCGC	3 cut(s)	73, 727, 1585
HinP1I	GCGC	3 cut(s)	73, 727, 1585
HincII	GTYRAC	2 cut(s)	286, 1566
HindII	GTYRAC	2 cut(s)	286, 1566
HinfI	GANTC	8 cut(s)	167, 186, 222, 394, 674, 824, 966, 1004
HpaII	CCGG	4 cut(s)	159, 171, 177, 183
HphI	GGTGA	5 cut(s)	142, 719, 908, 1390, 1504
Hpy166II	GTNNAC	4 cut(s)	226, 286, 1508, 1566
Hpy188I	TCNGA	8 cut(s)	166, 337, 411, 506, 598, 965, 1042, 1240
Hpy188III	TCNNGA	4 cut(s)	93, 355, 671, 1144
Hpy8I	GTNNAC	4 cut(s)	226, 286, 1508, 1566
HpyAV	CCTTC	9 cut(s)	64, 73, 384, 406, 495, 677, 1058, 1406, 1513
HpyCH4III	ACNGT	6 cut(s)	154, 238, 268, 592, 761, 1426
HpyCH4IV	ACGT	1 cut(s)	1261
HpyF3I	CTNAG	6 cut(s)	297, 795, 1039, 1088, 1278, 1311
HpySE526I	ACGT	1 cut(s)	1261
HspAI	GCGC	3 cut(s)	73, 727, 1585
KroI	GCCGGC	1 cut(s)	158
KroNI	GCCGGC	1 cut(s)	160
Ksp22I	TGATCA	1 cut(s)	913
Kzo9I	GATC	5 cut(s)	442, 913, 979, 1284, 1467
LguI	GCTCTTC	1 cut(s)	736
LmnI	GCTCC	3 cut(s)	167, 236, 511
Lsp1109I	GCAGC	6 cut(s)	199, 598, 711, 803, 1042, 1139
LweI	GCATC	7 cut(s)	117, 566, 673, 788, 1033, 1201, 1485
MaeI	CTAG	1 cut(s)	1121
MaeII	ACGT	1 cut(s)	1261
MaeIII	GTNAC	2 cut(s)	535, 997
MalI	GATC	5 cut(s)	444, 915, 981, 1286, 1469
MboI	GATC	5 cut(s)	442, 913, 979, 1284, 1467
MboII	GAAGA	6 cut(s)	108, 389, 403, 688, 723, 1294
MhlI	GDGCHC	3 cut(s)	333, 638, 1267
MluCI	AATT	5 cut(s)	114, 617, 1345, 1442, 1500
MlyI	GAGTC	2 cut(s)	231, 833
MmeI	TCCRAC	2 cut(s)	1108, 1397
MnlI	CCTC	8 cut(s)	68, 292, 502, 547, 703, 918, 1061, 1594
Mph1103I	ATGCAT	1 cut(s)	345
MroNI	GCCGGC	1 cut(s)	158
MseI	TTAA	7 cut(s)	201, 579, 654, 702, 831, 930, 1050
MslI	CAYNNNNRTG	2 cut(s)	125, 348
MspA1I	CMGCKG	1 cut(s)	794
MspCI	CTTAAG	2 cut(s)	200, 929
MspI	CCGG	4 cut(s)	159, 171, 177, 183
MvnI	CGCG	1 cut(s)	219
NaeI	GCCGGC	1 cut(s)	160
NcoI	CCATGG	1 cut(s)	1159
NdeII	GATC	5 cut(s)	442, 913, 979, 1284, 1467
NgoMIV	GCCGGC	1 cut(s)	158
NlaIV	GGNNCC	9 cut(s)	138, 163, 175, 181, 636, 898, 907, 1028, 1342
NmuCI	GTSAC	1 cut(s)	997
NsbI	TGCGCA	1 cut(s)	1586
NsiI	ATGCAT	1 cut(s)	345
NspI	RCATGY	6 cut(s)	146, 347, 370, 604, 1246, 1319
PaeI	GCATGC	2 cut(s)	370, 1319
PciI	ACATGT	1 cut(s)	142
PciSI	GCTCTTC	1 cut(s)	736
PdiI	GCCGGC	1 cut(s)	160
PfeI	GAWTC	6 cut(s)	167, 186, 394, 674, 966, 1004
PkrI	GCNGC	7 cut(s)	214, 613, 726, 793, 1057, 1129, 1361
PleI	GAGTC	2 cut(s)	230, 832
PmaCI	CACGTG	1 cut(s)	1262
PmlI	CACGTG	1 cut(s)	1262
PpsI	GAGTC	2 cut(s)	230, 832
Ppu21I	YACGTR	1 cut(s)	1262
PscI	ACATGT	1 cut(s)	142
PshAI	GACNNNNGTC	1 cut(s)	1079
PsiI	TTATAA	1 cut(s)	494
PspCI	CACGTG	1 cut(s)	1262
PspN4I	GGNNCC	9 cut(s)	138, 163, 175, 181, 636, 898, 907, 1028, 1342
PspOMI	GGGCCC	1 cut(s)	634
PspPI	GGNCC	8 cut(s)	196, 482, 634, 635, 896, 905, 1027, 1274
PstNI	CAGNNNCTG	1 cut(s)	1046
PvuII	CAGCTG	1 cut(s)	794
RsaI	GTAC	4 cut(s)	147, 474, 763, 1509
RsaNI	GTAC	4 cut(s)	146, 473, 762, 1508
RseI	CAYNNNNRTG	2 cut(s)	125, 348
SalI	GTCGAC	1 cut(s)	284
SapI	GCTCTTC	1 cut(s)	736
SaqAI	TTAA	7 cut(s)	201, 579, 654, 702, 831, 930, 1050
SatI	GCNGC	7 cut(s)	213, 612, 725, 792, 1056, 1128, 1360
Sau3AI	GATC	5 cut(s)	442, 913, 979, 1284, 1467
Sau96I	GGNCC	8 cut(s)	196, 482, 634, 635, 896, 905, 1027, 1274
SchI	GAGTC	2 cut(s)	231, 833
SduI	GDGCHC	3 cut(s)	333, 638, 1267
SfaNI	GCATC	7 cut(s)	117, 566, 673, 788, 1033, 1201, 1485
SfcI	CTRYAG	1 cut(s)	1059
SinI	GGWCC	3 cut(s)	196, 482, 896
SmiMI	CAYNNNNRTG	2 cut(s)	125, 348
SmlI	CTYRAG	4 cut(s)	200, 320, 821, 929
SmoI	CTYRAG	4 cut(s)	200, 320, 821, 929
SphI	GCATGC	2 cut(s)	370, 1319
Sse9I	AATT	5 cut(s)	114, 617, 1345, 1442, 1500
SsiI	CCGC	6 cut(s)	40, 83, 194, 219, 1359, 1362
SspMI	CTAG	1 cut(s)	1121
StyI	CCWWGG	3 cut(s)	861, 901, 1159
TaaI	ACNGT	6 cut(s)	154, 238, 268, 592, 761, 1426
TaiI	ACGT	1 cut(s)	1264
TaqI	TCGA	1 cut(s)	285
TasI	AATT	5 cut(s)	114, 617, 1345, 1442, 1500
TatI	WGTACW	2 cut(s)	145, 472
TauI	GCSGC	1 cut(s)	1362
TfiI	GAWTC	6 cut(s)	167, 186, 394, 674, 966, 1004
Tru1I	TTAA	7 cut(s)	201, 579, 654, 702, 831, 930, 1050
Tru9I	TTAA	7 cut(s)	201, 579, 654, 702, 831, 930, 1050
TscAI	CASTG	3 cut(s)	241, 259, 1596
TseFI	GTSAC	1 cut(s)	997
TseI	GCWGC	6 cut(s)	212, 611, 724, 791, 1055, 1127
Tsp45I	GTSAC	1 cut(s)	997
TspDTI	ATGAA	5 cut(s)	109, 389, 666, 874, 1028
TspRI	CASTG	3 cut(s)	241, 259, 1596
Vha464I	CTTAAG	2 cut(s)	200, 929
VpaK11BI	GGWCC	3 cut(s)	196, 482, 896
XagI	CCTNNNNNAGG	1 cut(s)	378
XapI	RAATTY	1 cut(s)	114
XceI	RCATGY	6 cut(s)	146, 347, 370, 604, 1246, 1319
XmiI	GTMKAC	2 cut(s)	225, 285
XspI	CTAG	1 cut(s)	1121
Zsp2I	ATGCAT	1 cut(s)	345

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.