Rmu_sc0000557.1_g000009

Chaperone protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000557.1
OG0016348
Physical Location & Seq
Forward (+)
31581 .. 35084
3504 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2220 bp
atggagccgccgtcgtcgacattgcaacttatgggtgagcttcgtgaagataaggaggagttagagatcacttatggtgttcaaatccccgaagatgccctgtctctcgcttgcagcattgccatgagatactctgatgccaccaaagatgtgaattataagactgagaagtcattagcgggacagctggcagttcacctcttagctaaatcatgttttgaactcattaatgattttgacatgggtgtagagaattgtttcgacgtgtactcactcatccgcgcacatattgagttgaatgaatgtaagaaagaaaaggctcctaccagccaatgctggatcgactatgtaacagatgagtataaagatcttaaggaaaagtggcatacacttgaggagaaatggaagctagtcttgcagtccaggcggagatcagaaagaagaattcaagaagtagaggcactgaagcatgtgcgcgtaaatcttctttcttatttgcagcaaccggaagtggtgaaaccaacagaccttgtgcagcttttttcccttgtacatgtgcttggcaaagatcaaaatgagctgttaactatttacccttttatgatagccaaggtagcgtggtccttgactggtattccaaaatcatggttacttcattctacggaaccactatttctcccagatattggccccacatttgcaaagagggttgtggggcaagagcttcctaaacttgctgtcaccggtgccttgacagagcttgggcctggggcgcacccaattgcttcgtttctatttctttgccggcctggttgtggcaggacagagcttgctaaagccattgctgagctattttttgatgaaaaggacaggttgactgaactcaacatggtaaaatataagtgtgcagatcatgtatctgatgaagatgaatatgacttcccacggtatgaatcgaagtcagaatttagggagcatctcctagaagccgtgaagaagagtccttttggtgttgtcttgcttgataacattgaagttgctcgtccatctgatgtagacattttggttgaaattttaacccatggaagactgagcgatgggaaaggacactctgttgatttcactaagatagtgattattctgacatcaaatgttgtgcaagatccatttatgttgcgctgttgcaaatgtactgagatggttgaaaactgtttttttaaagacctggataaagattcaccaaatggtgtttgccgtcaccttttgattctacgaaaggcaagaaagcattttaggactgagttatttgaaactctgaatgatgtcattgcattcgagcccctttcacttctgcactacagatgtgttacgagattgttgttgagggacatcgcatgctccattacagaaaagcgcctcatcatatgcccatctgaagctgcagttagagctgtattacttgattcggattttacgcgtgatggcacaaaaagtataaagagctatcttcagaccaatgtagaagctatgctaaaggatcgccttaatgagattgatggcccgtgtgttgtctatatggatgcctccgtggggacagaggagttgtcttattttagatttgagaagatgagtgcattagattatgatcaggaattaagggacttcgtaaactcttcaagtgaattaagatcaacatacaagaaagagaaggtctggctgaagaaagtttccatgctgaaacgaagttttcctgaatttctggctaatgaaaaggcggtgaaggatccggccaaactttctaaggttctgcatataatagacagtctattagaaaatgcaactcatgaaaatgccacagtgaatgcaattggctccttggagaaatctgttgaacctcgggatgatcaattggggagatctaagaagatggctaagaatggtatcaatggtctgcgggcatctttgtccaatctgatggtaaaggacgaattcattggtacagtagctgccgcctctctcatgtctattgattctccaccacagggtctcccatgtagacctgccaagacatttttactgttgggtcttacggaagttggtaaggcagatcttgttaaaggtttaatggagcattttgtgagtgatgatgggatgagcctattgtttcaaattgatatgtccaagcatgatgacacagagacatgtttctcaagcatgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04213 map04213
Pfam Domains
Protein Families
AAA_2

Protein Analysis

739

Amino Acids

83.68

Weight (kDa)

5.61

Isoelectric Point (pI)

44.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_2 PF07724 260 - 388 2.7e-23 AAA domain (Cdc48 subfamily)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016348)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g22170 FvH4_5g22170 FvH4_5g22170 FvH4_5g22170
rosa_chinensis RchiOBHm_Chr7g0209851
rosa_laevigata RLG00000003086
rosa_multiflora Rmu_sc0000557.1_g000009 Rmu_sc0018257.1_g000004
rosa_roxburghii Rroxscaffold_3G00248900
rosa_rugosa Rorug07G0116400
rosa_samantha Rh7AG250600 Rh7BG244700 Rh7CG266700 Rh7DG256400
rosa_wichuraiana Rw7G021230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 159
AasI GACNNNNNNGTC 1 cut(s) 169
Acc36I ACCTGC 1 cut(s) 2068
AccB1I GGYRCC 1 cut(s) 746
AccB7I CCANNNNNTGG 1 cut(s) 686
AccI GTMKAC 3 cut(s) 17, 1056, 2056
AccII CGCG 3 cut(s) 282, 477, 1477
AciI CCGC 7 cut(s) 8, 179, 280, 427, 1775, 1954, 2010
AclWI GGATC 5 cut(s) 347, 1157, 1545, 1778, 1791
AcoI YGGCCR 1 cut(s) 1788
AcsI RAATTY 5 cut(s) 444, 965, 1071, 1754, 1988
AcuI CTGAAG 4 cut(s) 485, 1455, 1493, 1739
AfaI GTAC 4 cut(s) 269, 552, 1192, 1999
AfiI CCNNNNNNNGG 4 cut(s) 686, 815, 1590, 2042
AflII CTTAAG 1 cut(s) 371
AflIII ACRYGT 4 cut(s) 264, 553, 1475, 2201
AgeI ACCGGT 1 cut(s) 743
AjiI CACGTC 1 cut(s) 265
AjnI CCWGG 4 cut(s) 422, 766, 808, 1224
Alw26I GTCTC 3 cut(s) 108, 2051, 2192
AlwI GGATC 5 cut(s) 347, 1157, 1545, 1778, 1791
AlwNI CAGNNNCTG 1 cut(s) 2006
Ama87I CYCGRG 1 cut(s) 1896
AoxI GGCC 5 cut(s) 688, 764, 806, 1558, 1788
ApeKI GCWGC 5 cut(s) 114, 499, 535, 1439, 2006
ApoI RAATTY 5 cut(s) 444, 965, 1071, 1754, 1988
AseI ATTAAT 1 cut(s) 228
AsiGI ACCGGT 1 cut(s) 743
Asp700I GAANNNNTTC 1 cut(s) 257
AspLEI GCGC 5 cut(s) 284, 477, 775, 1179, 1416
AspS9I GGNCC 4 cut(s) 621, 689, 764, 1559
AsuHPI GGTGA 7 cut(s) 47, 188, 526, 733, 1230, 1250, 1789
AvaI CYCGRG 1 cut(s) 1896
AvaII GGWCC 1 cut(s) 621
BamHI GGATCC 1 cut(s) 1783
BanI GGYRCC 1 cut(s) 746
BanII GRGCYC 1 cut(s) 1341
BbsI GAAGAC 1 cut(s) 1093
BbvI GCAGC 5 cut(s) 126, 511, 547, 1426, 1993
BccI CCATC 9 cut(s) 1054, 1091, 1192, 1438, 1475, 1550, 1921, 1969, 2141
BceAI ACGGC 2 cut(s) 974, 1239
BciT130I CCWGG 4 cut(s) 424, 768, 810, 1226
BclI TGATCA 2 cut(s) 1645, 1903
BcoDI GTCTC 3 cut(s) 108, 2051, 2192
BfaI CTAG 2 cut(s) 410, 983
BfmI CTRYAG 2 cut(s) 1357, 1440
BfoI RGCGCY 1 cut(s) 1417
BfrI CTTAAG 1 cut(s) 371
BfuAI ACCTGC 1 cut(s) 2068
BglII AGATCT 3 cut(s) 367, 1916, 2107
BisI GCNGC 7 cut(s) 8, 115, 500, 536, 1440, 2007, 2010
BlpI GCTNAGC 1 cut(s) 846
BlsI GCNGC 7 cut(s) 9, 116, 501, 537, 1441, 2008, 2011
Bme1390I CCNGG 4 cut(s) 424, 768, 810, 1226
Bme18I GGWCC 1 cut(s) 621
BmeT110I CYCGRG 1 cut(s) 1896
BmgBI CACGTC 1 cut(s) 265
BmgT120I GGNCC 4 cut(s) 621, 689, 764, 1559
BmiI GGNNCC 7 cut(s) 6, 321, 666, 691, 748, 1785, 1873
BmrFI CCNGG 4 cut(s) 424, 768, 810, 1226
BmsI GCATC 5 cut(s) 85, 127, 985, 1570, 1967
BpiI GAAGAC 1 cut(s) 1093
Bpu1102I GCTNAGC 1 cut(s) 846
BpuEI CTTGAG 2 cut(s) 413, 2194
BsaBI GATNNNNATC 1 cut(s) 1644
BsaI GGTCTC 1 cut(s) 2051
BsaJI CCNNGG 7 cut(s) 609, 767, 944, 1081, 1587, 1875, 1895
BsaWI WCCGGW 2 cut(s) 505, 743
BsaXI ACNNNNNCTCC 5 cut(s) 26, 660, 690, 2031, 2061
Bsc4I CCNNNNNNNGG 4 cut(s) 686, 815, 1590, 2042
Bse118I RCCGGY 2 cut(s) 743, 804
Bse1I ACTGG 1 cut(s) 634
Bse3DI GCAATG 4 cut(s) 20, 117, 840, 1326
Bse8I GATNNNNATC 1 cut(s) 1644
BseBI CCWGG 4 cut(s) 424, 768, 810, 1226
BseDI CCNNGG 7 cut(s) 609, 767, 944, 1081, 1587, 1875, 1895
BseGI GGATG 4 cut(s) 276, 1585, 1906, 2157
BseJI GATNNNNATC 1 cut(s) 1644
BseLI CCNNNNNNNGG 4 cut(s) 686, 815, 1590, 2042
BseMI GCAATG 4 cut(s) 20, 117, 840, 1326
BseMII CTCAG 5 cut(s) 156, 837, 1082, 1185, 1290
BseNI ACTGG 1 cut(s) 634
BseRI GAGGAG 3 cut(s) 71, 410, 1613
BseXI GCAGC 5 cut(s) 126, 511, 547, 1426, 1993
BsgI GTGCAG 3 cut(s) 554, 927, 1337
Bsh1236I CGCG 3 cut(s) 282, 477, 1477
BshFI GGCC 5 cut(s) 690, 766, 808, 1560, 1790
BshNI GGYRCC 1 cut(s) 746
BshTI ACCGGT 1 cut(s) 743
BsiHKCI CYCGRG 1 cut(s) 1896
BsiSI CCGG 4 cut(s) 506, 744, 805, 1787
BslFI GGGAC 4 cut(s) 195, 1400, 1606, 1673
BslI CCNNNNNNNGG 4 cut(s) 686, 815, 1590, 2042
BsmAI GTCTC 3 cut(s) 108, 2051, 2192
BsmFI GGGAC 4 cut(s) 195, 1400, 1606, 1673
BsmI GAATGC 2 cut(s) 1331, 1867
BsnI GGCC 5 cut(s) 690, 766, 808, 1560, 1790
Bso31I GGTCTC 1 cut(s) 2051
BsoBI CYCGRG 1 cut(s) 1896
Bsp1286I GDGCHC 1 cut(s) 1341
Bsp1407I TGTACA 1 cut(s) 550
Bsp1720I GCTNAGC 1 cut(s) 846
Bsp19I CCATGG 1 cut(s) 1081
BspACI CCGC 7 cut(s) 8, 179, 280, 427, 1775, 1954, 2010
BspANI GGCC 5 cut(s) 690, 766, 808, 1560, 1790
BspCNI CTCAG 5 cut(s) 157, 838, 1083, 1186, 1291
BspFNI CGCG 3 cut(s) 282, 477, 1477
BspHI TCATGA 1 cut(s) 1843
BspLI GGNNCC 7 cut(s) 6, 321, 666, 691, 748, 1785, 1873
BspMAI CTGCAG 1 cut(s) 1444
BspMI ACCTGC 1 cut(s) 2068
BspPI GGATC 5 cut(s) 347, 1157, 1545, 1778, 1791
BspT107I GGYRCC 1 cut(s) 746
BspTI CTTAAG 1 cut(s) 371
BspTNI GGTCTC 1 cut(s) 2051
BsrDI GCAATG 4 cut(s) 20, 117, 840, 1326
BsrFI RCCGGY 2 cut(s) 743, 804
BsrGI TGTACA 1 cut(s) 550
BsrI ACTGG 1 cut(s) 634
BssAI RCCGGY 2 cut(s) 743, 804
BssECI CCNNGG 7 cut(s) 609, 767, 944, 1081, 1587, 1875, 1895
BssT1I CCWWGG 3 cut(s) 609, 1081, 1875
Bst2UI CCWGG 4 cut(s) 424, 768, 810, 1226
Bst4CI ACNGT 6 cut(s) 948, 1211, 1823, 1858, 2002, 2079
Bst6I CTCTTC 2 cut(s) 992, 1678
BstAFI CTTAAG 1 cut(s) 371
BstAUI TGTACA 1 cut(s) 550
BstC8I GCNNGC 6 cut(s) 112, 189, 806, 831, 1396, 1956
BstDSI CCRYGG 3 cut(s) 944, 1081, 1587
BstF5I GGATG 4 cut(s) 276, 1585, 1906, 2157
BstFNI CGCG 3 cut(s) 282, 477, 1477
BstH2I RGCGCY 1 cut(s) 1417
BstHHI GCGC 5 cut(s) 284, 477, 775, 1179, 1416
BstMAI GTCTC 3 cut(s) 108, 2051, 2192
BstMWI GCNNNNNNNGC 5 cut(s) 415, 424, 614, 772, 1448
BstNI CCWGG 4 cut(s) 424, 768, 810, 1226
BstNSI RCATGY 5 cut(s) 473, 557, 1398, 2205, 2218
BstSCI CCNGG 4 cut(s) 422, 766, 808, 1224
BstSFI CTRYAG 2 cut(s) 1357, 1440
BstUI CGCG 3 cut(s) 282, 477, 1477
BstV1I GCAGC 5 cut(s) 126, 511, 547, 1426, 1993
BstV2I GAAGAC 1 cut(s) 1093
BstX2I RGATCY 5 cut(s) 367, 1162, 1783, 1916, 2107
BstXI CCANNNNNNTGG 2 cut(s) 645, 1975
BstYI RGATCY 5 cut(s) 367, 1162, 1783, 1916, 2107
BsuRI GGCC 5 cut(s) 690, 766, 808, 1560, 1790
BtgI CCRYGG 3 cut(s) 944, 1081, 1587
BtgZI GCGATG 2 cut(s) 1110, 1375
BtrI CACGTC 1 cut(s) 265
BtsCI GGATG 4 cut(s) 276, 1585, 1906, 2157
BtsIMutI CAGTG 2 cut(s) 461, 1863
BveI ACCTGC 1 cut(s) 2068
Cac8I GCNNGC 6 cut(s) 112, 189, 806, 831, 1396, 1956
CaiI CAGNNNCTG 1 cut(s) 2006
CciI TCATGA 1 cut(s) 1843
CfoI GCGC 5 cut(s) 284, 477, 775, 1179, 1416
Cfr10I RCCGGY 2 cut(s) 743, 804
Cfr13I GGNCC 4 cut(s) 621, 689, 764, 1559
Csp6I GTAC 4 cut(s) 268, 551, 1191, 1998
CspAI ACCGGT 1 cut(s) 743
CviQI GTAC 4 cut(s) 268, 551, 1191, 1998
DraI TTTAAA 1 cut(s) 1219
DrdI GACNNNNNNGTC 1 cut(s) 169
DseDI GACNNNNNNGTC 1 cut(s) 169
EaeI YGGCCR 1 cut(s) 1788
Eam1104I CTCTTC 2 cut(s) 992, 1678
EarI CTCTTC 2 cut(s) 992, 1678
EciI GGCGGA 1 cut(s) 442
Eco130I CCWWGG 3 cut(s) 609, 1081, 1875
Eco24I GRGCYC 1 cut(s) 1341
Eco31I GGTCTC 1 cut(s) 2051
Eco47I GGWCC 1 cut(s) 621
Eco57I CTGAAG 4 cut(s) 485, 1455, 1493, 1739
Eco88I CYCGRG 1 cut(s) 1896
EcoRI GAATTC 2 cut(s) 444, 1988
EcoRII CCWGG 4 cut(s) 422, 766, 808, 1224
EcoT14I CCWWGG 3 cut(s) 609, 1081, 1875
EcoT38I GRGCYC 1 cut(s) 1341
ErhI CCWWGG 3 cut(s) 609, 1081, 1875
FalI AAGNNNNNCTT 2 cut(s) 398, 430
FaqI GGGAC 4 cut(s) 195, 1400, 1606, 1673
FauI CCCGC 2 cut(s) 172, 1947
FauNDI CATATG 1 cut(s) 1424
FbaI TGATCA 2 cut(s) 1645, 1903
FblI GTMKAC 3 cut(s) 17, 1056, 2056
Fnu4HI GCNGC 7 cut(s) 8, 115, 500, 536, 1440, 2007, 2010
FokI GGATG 4 cut(s) 263, 1592, 1913, 2164
FriOI GRGCYC 1 cut(s) 1341
Fsp4HI GCNGC 7 cut(s) 8, 115, 500, 536, 1440, 2007, 2010
FspBI CTAG 2 cut(s) 410, 983
GlaI GCGC 5 cut(s) 283, 476, 774, 1178, 1415
GluI GCNGC 7 cut(s) 8, 115, 500, 536, 1440, 2007, 2010
HaeII RGCGCY 1 cut(s) 1417
HaeIII GGCC 5 cut(s) 690, 766, 808, 1560, 1790
HapII CCGG 4 cut(s) 506, 744, 805, 1787
HhaI GCGC 5 cut(s) 284, 477, 775, 1179, 1416
Hin6I GCGC 5 cut(s) 282, 475, 773, 1177, 1414
HinP1I GCGC 5 cut(s) 282, 475, 773, 1177, 1414
HincII GTYRAC 3 cut(s) 18, 585, 876
HindII GTYRAC 3 cut(s) 18, 585, 876
HinfI GANTC 6 cut(s) 953, 1000, 1235, 1267, 1463, 2030
HpaI GTTAAC 1 cut(s) 585
HpaII CCGG 4 cut(s) 506, 744, 805, 1787
HphI GGTGA 7 cut(s) 47, 188, 526, 733, 1230, 1250, 1789
Hpy166II GTNNAC 8 cut(s) 18, 196, 268, 585, 876, 1057, 1669, 2057
Hpy188III TCNNGA 6 cut(s) 44, 449, 1649, 1751, 1844, 1898
Hpy8I GTNNAC 8 cut(s) 18, 196, 268, 585, 876, 1057, 1669, 2057
Hpy99I CGWCG 3 cut(s) 16, 19, 266
HpyAV CCTTC 2 cut(s) 1702, 1774
HpyCH4III ACNGT 6 cut(s) 948, 1211, 1823, 1858, 2002, 2079
HpyCH4IV ACGT 1 cut(s) 264
HpyF10VI GCNNNNNNNGC 5 cut(s) 415, 424, 614, 772, 1448
HpySE526I ACGT 1 cut(s) 264
HspAI GCGC 5 cut(s) 282, 475, 773, 1177, 1414
KroI GCCGGC 1 cut(s) 804
KroNI GCCGGC 1 cut(s) 806
Ksp22I TGATCA 2 cut(s) 1645, 1903
KspAI GTTAAC 1 cut(s) 585
LmnI GCTCC 6 cut(s) 4, 325, 973, 1403, 1877, 2128
Lsp1109I GCAGC 5 cut(s) 126, 511, 547, 1426, 1993
LweI GCATC 5 cut(s) 85, 127, 985, 1570, 1967
MaeI CTAG 2 cut(s) 410, 983
MaeII ACGT 1 cut(s) 264
MaeIII GTNAC 5 cut(s) 349, 648, 739, 1256, 1366
MfeI CAATTG 3 cut(s) 780, 1866, 1907
MflI RGATCY 5 cut(s) 367, 1162, 1783, 1916, 2107
MhlI GDGCHC 1 cut(s) 1341
MluI ACGCGT 1 cut(s) 1475
MlyI GAGTC 1 cut(s) 1009
MroNI GCCGGC 1 cut(s) 804
MroXI GAANNNNTTC 1 cut(s) 257
MslI CAYNNNNRTG 2 cut(s) 122, 1848
MspA1I CMGCKG 1 cut(s) 187
MspCI CTTAAG 1 cut(s) 371
MspI CCGG 4 cut(s) 506, 744, 805, 1787
MspR9I CCNGG 4 cut(s) 424, 768, 810, 1226
MunI CAATTG 3 cut(s) 780, 1866, 1907
Mva1269I GAATGC 2 cut(s) 1331, 1867
MvaI CCWGG 4 cut(s) 424, 768, 810, 1226
MvnI CGCG 3 cut(s) 282, 477, 1477
MwoI GCNNNNNNNGC 5 cut(s) 415, 424, 614, 772, 1448
NaeI GCCGGC 1 cut(s) 806
NcoI CCATGG 1 cut(s) 1081
NdeI CATATG 1 cut(s) 1424
NgoMIV GCCGGC 1 cut(s) 804
NlaIV GGNNCC 7 cut(s) 6, 321, 666, 691, 748, 1785, 1873
NmuCI GTSAC 2 cut(s) 739, 1256
NspI RCATGY 5 cut(s) 473, 557, 1398, 2205, 2218
PaeI GCATGC 1 cut(s) 1398
PagI TCATGA 1 cut(s) 1843
PciI ACATGT 2 cut(s) 553, 2201
PctI GAATGC 2 cut(s) 1331, 1867
PdiI GCCGGC 1 cut(s) 806
PdmI GAANNNNTTC 1 cut(s) 257
PfeI GAWTC 5 cut(s) 953, 1235, 1267, 1463, 2030
PflMI CCANNNNNTGG 1 cut(s) 686
PinAI ACCGGT 1 cut(s) 743
PkrI GCNGC 7 cut(s) 9, 116, 501, 537, 1441, 2008, 2011
PleI GAGTC 1 cut(s) 1008
PpsI GAGTC 1 cut(s) 1008
PscI ACATGT 2 cut(s) 553, 2201
PshBI ATTAAT 1 cut(s) 228
PsiI TTATAA 1 cut(s) 159
Psp6I CCWGG 4 cut(s) 422, 766, 808, 1224
PspGI CCWGG 4 cut(s) 422, 766, 808, 1224
PspN4I GGNNCC 7 cut(s) 6, 321, 666, 691, 748, 1785, 1873
PspPI GGNCC 4 cut(s) 621, 689, 764, 1559
PstI CTGCAG 1 cut(s) 1444
PstNI CAGNNNCTG 1 cut(s) 2006
PsuI RGATCY 5 cut(s) 367, 1162, 1783, 1916, 2107
PvuII CAGCTG 1 cut(s) 187
RsaI GTAC 4 cut(s) 269, 552, 1192, 1999
RsaNI GTAC 4 cut(s) 268, 551, 1191, 1998
RseI CAYNNNNRTG 2 cut(s) 122, 1848
SalI GTCGAC 1 cut(s) 16
SatI GCNGC 7 cut(s) 8, 115, 500, 536, 1440, 2007, 2010
Sau96I GGNCC 4 cut(s) 621, 689, 764, 1559
SchI GAGTC 1 cut(s) 1009
ScrFI CCNGG 4 cut(s) 424, 768, 810, 1226
SduI GDGCHC 1 cut(s) 1341
SfaNI GCATC 5 cut(s) 85, 127, 985, 1570, 1967
SfcI CTRYAG 2 cut(s) 1357, 1440
SgrAI CRCCGGYG 1 cut(s) 743
SinI GGWCC 1 cut(s) 621
SmiMI CAYNNNNRTG 2 cut(s) 122, 1848
SmlI CTYRAG 3 cut(s) 371, 392, 2209
SmoI CTYRAG 3 cut(s) 371, 392, 2209
SphI GCATGC 1 cut(s) 1398
SsiI CCGC 7 cut(s) 8, 179, 280, 427, 1775, 1954, 2010
SspMI CTAG 2 cut(s) 410, 983
StyD4I CCNGG 4 cut(s) 422, 766, 808, 1224
StyI CCWWGG 3 cut(s) 609, 1081, 1875
TaaI ACNGT 6 cut(s) 948, 1211, 1823, 1858, 2002, 2079
TaiI ACGT 1 cut(s) 267
TaqI TCGA 5 cut(s) 17, 261, 342, 956, 1335
TatI WGTACW 3 cut(s) 267, 550, 1190
TauI GCSGC 2 cut(s) 10, 2012
TfiI GAWTC 5 cut(s) 953, 1235, 1267, 1463, 2030
TscAI CASTG 2 cut(s) 468, 1863
TseFI GTSAC 2 cut(s) 739, 1256
TseI GCWGC 5 cut(s) 114, 499, 535, 1439, 2006
Tsp45I GTSAC 2 cut(s) 739, 1256
TspDTI ATGAA 9 cut(s) 315, 644, 876, 939, 945, 966, 1782, 1860, 1981
TspGWI ACGGA 3 cut(s) 677, 1576, 2105
TspRI CASTG 2 cut(s) 468, 1863
Van91I CCANNNNNTGG 1 cut(s) 686
Vha464I CTTAAG 1 cut(s) 371
VpaK11BI GGWCC 1 cut(s) 621
VspI ATTAAT 1 cut(s) 228
XapI RAATTY 5 cut(s) 444, 965, 1071, 1754, 1988
XceI RCATGY 5 cut(s) 473, 557, 1398, 2205, 2218
XmiI GTMKAC 3 cut(s) 17, 1056, 2056
XmnI GAANNNNTTC 1 cut(s) 257
XspI CTAG 2 cut(s) 410, 983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.