Rw7G021230

Chaperone protein

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Forward (+)
24499262 .. 24503558
4297 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G021230.1

Sequence Viewer

Length: 2703 bp
ATGGGTGAGCTTCGTGAAGATAAGGAGGAGTTAGAGATCACTTATGGTGTTCAAATCCCCGAAGATGCCCTGTCTCTCGCTTGCAGCATTGCCATGAGATACTCTGATGTTTTACTGGCAGCCACCAAAGATGTGAATTATAAGACTGAGAAGTCATTACCGGGACAGCTGGCAGTTCACCTCTTAGATAAAGCATGTTTTGAACTCATTAATGATTTTGACATGGGTGTAGAGAATTGTTTCGACGTGTACTCACTCATCCGCGCACATATTGAGTTGAATGAATGTAAGAAAGAAAAGGCTCCTACCAGCCAATGCTGGATCGACTATGGAAATGAGTATAAAGATCTTAAGGAAAAGTGGCATACACTTGAGGGGAAATGGAAGCTAGTCTTGCAGTCCAGGCGGAGATCAGAAAGAAGAATTCAAGAAGTAGAGGCACTGAAGCATGTGCGCGTAGCGTGGTCCTTGACTGGTATTCCAAAATCATGGTTACTTCATTCTACGGAACCACTATTTCTCCCAGATATTGGCCCCACATTTGCAAAGAGGGTTGTGGGGCAAGAGCTTCCTAAACTTGCTGTCACCGGTGCCTTGACAGAGCTTGGGCCTGGGGCGCACCCAATTGCTTCGTTTCTATTTCTTTGCCGGCCTGGTTGTGGCAGGACAGAGCTTGCTAAAGCTATTGCTGAGCTATTTTTTGATGAAAAGGACAGGTTGACTGAACTCAACATGGTAAAATATAAGTGTGCAGATCATGTATCGGATGAAGATGAATATGACTTCCCACGGTATGAATCGAAGTCAGAATTTAGGGAGCATCTCCTAGAAGCCGTGAAGAAGAGTCCTTTTGGTGTTGTCTTGCTTGATAACATTGAAGTTGCTCGTACATCTGATGTAGACATTTTGGTTGAAATTTTAACCCATGGAAGACTGAGCGATGGGAAAGGACACTGTGTTGATTTCACTAAGATAGTGATTATTCTGACATCAAATGTTGTGCAAGATCCATTTATGTTGCGCTGTTGCAAATGTACTGAGAAGGTTGAAAACTGTTTTTTTAAAGACCTGGATGAAGATTCACCAAATGGTGTTTGCCGTCACCTTTTGATTCTACGAAAGGCAAGAAAGCATTTTAGGACTGAGTTATTTGAAACTCTGAATGATGTCATTGCATTCGAGCCCCTTTCACTTCTGCACTACAGATGTGTTACGAGATTGTTGTTAAGGGACATCGCATGCTCCATTACAGAAAAGCGCCTCATCATATGCCCATCTGAAGCTGCAGTTAGAGCTATATTACTTGATTCGGATTTTACGCGTGATGGCACAAAAAGTATAAAGAGCTATCTTCAGACCAATGTAGAAGCTATGCTAAAGGATCGCCTTAATGAGATTGATGGCCCGTGTGTTGTCTATATGGATGCCTCCGTGGGGATAGAGGAGTTGTCTTATTTTAGATTTGAGAAGATGAGTGCATTAGATTATGATCAGGAATTAAGGGACTTCGTAAACTCTTCAAGTGAATTAAGATCAACATACAAGAAAGAGAAGGTCTGGCTGAAGAAAGTTTCCATGCTGAAACGAAGTTTTCCTGAATTTCTGGCTAATGAAAAGGCGGTGAAGGATCCGGCCAAACTTTCTAAGGTTCTGCATATAATAGACAGTCTATTAGAAAATGCAACTCATGAAAATGCCACAGTGAATGCAATTGGCTCCTTGGAGAAATCTGTTGAACCTCGGGATGATCAATTGGGGAGATCTAAGAAGATGGCTAAGAATGGTATCAATGGTCTGCGGGCATCTTTGTCCAATCTGATGGTAAAGGACGAATTCATTGGTACAGTAGCTGCCGCCTTTCTCATGTCTATTGATTCTCCACCACAGGGTCTCCCATGTAGACCTGCCAAGACATTTTTACTGTTGGGTCTTACGGAAGTTGGTAAGGCAGATCTTGTTAAAGGTTTAATGGAGCATTTTGTGAGTGATGATGGGATGAGCCTATTGTTTCAAATTGATATGTCCAAGCATGATGACACAGAGACATGTTTCTCAAGCATGTACACTAGCAATGAGCAAGCGGTGAAGATAGTGCCTTATAGTATTTTCCTTATTGATCGAGTTGAAGATGCCCTTCCCTCCGAGTTCAATGCTCTAATACGACTGCTTGACTGCTGTACAATGAGTGACCAGCATGGACGCAAGGTTATTTTTAGTTGCTGCATTGTCATGGTTGCTTCAAGCGCTGGGAACAAGGACTTCATTGAAAAACTTGTCCACAGGAAATATAGTGCCAGATTTAATGGGAATGTCCTTGGACAGGAACTAAAAACATTTAGGTTCGAATTGCTGAATCGAATGGATGAGATGGTACTATTCAGTTCCTTATTTGGTGATCAACTTGGAAAATTCCTAAGGCTGTCAATGGATGGTGGAGGTGATCTTCATGAGAATCCTGTAAAGGAGGCTCTTGCATTTGAACTTGCTTTTCAGGATTTGTTTCTGCCTGCTAAATCTCTATCTGATCCACCCAGTCCACAGAACCAAGCAGATTCTGTGTTCTATCTTTTAAAATGGCGTGTCATCAGAGATGATGGACTTGAAGTTATGGACAAGAGTACCTTTTATCGCCACTTCTTGAATGGTTCATCAGGGAATATGAATGAGTCTGATACAGGACCCGTATTTCAACTGTCACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

900

Amino Acids

101.87

Weight (kDa)

5.57

Isoelectric Point (pI)

41.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA_2 PF07724 208 - 336 2.1e-22 AAA domain (Cdc48 subfamily)
AAA_2 PF07724 635 - 789 4.6e-13 AAA domain (Cdc48 subfamily)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0016348)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 141
AasI GACNNNNNNGTC 1 cut(s) 151
Acc36I ACCTGC 1 cut(s) 1912
AccB1I GGYRCC 1 cut(s) 590
AccB7I CCANNNNNTGG 1 cut(s) 530
AccI GTMKAC 2 cut(s) 900, 1900
AccII CGCG 3 cut(s) 264, 456, 1321
AciI CCGC 6 cut(s) 262, 406, 1619, 1798, 1854, 2081
AclWI GGATC 6 cut(s) 329, 1001, 1389, 1622, 1635, 2519
AcoI YGGCCR 1 cut(s) 1632
AcsI RAATTY 6 cut(s) 423, 809, 915, 1598, 1832, 2408
AcuI CTGAAG 4 cut(s) 464, 1299, 1337, 1583
AfaI GTAC 8 cut(s) 251, 889, 1036, 1843, 2063, 2179, 2373, 2620
AfeI AGCGCT 1 cut(s) 2245
AfiI CCNNNNNNNGG 5 cut(s) 530, 659, 1434, 1886, 2320
AflII CTTAAG 1 cut(s) 350
AflIII ACRYGT 3 cut(s) 246, 1319, 2045
AgeI ACCGGT 1 cut(s) 587
AjiI CACGTC 1 cut(s) 247
AjnI CCWGG 4 cut(s) 401, 610, 652, 1068
Alw26I GTCTC 3 cut(s) 78, 1895, 2036
AlwI GGATC 6 cut(s) 329, 1001, 1389, 1622, 1635, 2519
AlwNI CAGNNNCTG 2 cut(s) 1850, 2555
Ama87I CYCGRG 1 cut(s) 1740
Aor51HI AGCGCT 1 cut(s) 2245
AoxI GGCC 5 cut(s) 532, 608, 650, 1402, 1632
ApeKI GCWGC 5 cut(s) 84, 119, 1283, 1850, 2220
ApoI RAATTY 6 cut(s) 423, 809, 915, 1598, 1832, 2408
AseI ATTAAT 1 cut(s) 210
AsiGI ACCGGT 1 cut(s) 587
Asp700I GAANNNNTTC 1 cut(s) 239
AspLEI GCGC 6 cut(s) 266, 456, 619, 1023, 1260, 2246
AspS9I GGNCC 5 cut(s) 465, 533, 608, 1403, 2678
AsuC2I CCSGG 1 cut(s) 162
AsuHPI GGTGA 9 cut(s) 17, 170, 577, 1074, 1094, 1633, 2095, 2405, 2450
AsuII TTCGAA 1 cut(s) 2343
AvaI CYCGRG 1 cut(s) 1740
AvaII GGWCC 2 cut(s) 465, 2678
AxyI CCTNAGG 1 cut(s) 2414
BaeI ACNNNNGTAYC 2 cut(s) 2602, 2635
BamHI GGATCC 1 cut(s) 1627
BanI GGYRCC 1 cut(s) 590
BanII GRGCYC 1 cut(s) 1185
BbsI GAAGAC 1 cut(s) 937
BbvI GCAGC 5 cut(s) 96, 131, 1270, 1837, 2207
BceAI ACGGC 2 cut(s) 818, 1083
BcgI CGANNNNNNTGC 2 cut(s) 2132, 2166
BciT130I CCWGG 4 cut(s) 403, 612, 654, 1070
BclI TGATCA 3 cut(s) 1489, 1747, 2395
BcnI CCSGG 1 cut(s) 162
BcoDI GTCTC 3 cut(s) 78, 1895, 2036
BfaI CTAG 3 cut(s) 389, 827, 2067
BfmI CTRYAG 3 cut(s) 1201, 1284, 2699
BfoI RGCGCY 2 cut(s) 1261, 2247
BfrI CTTAAG 1 cut(s) 350
BfuAI ACCTGC 1 cut(s) 1912
BglII AGATCT 3 cut(s) 346, 1760, 1951
BisI GCNGC 6 cut(s) 85, 120, 1284, 1851, 1854, 2221
BlpI GCTNAGC 1 cut(s) 690
BlsI GCNGC 6 cut(s) 86, 121, 1285, 1852, 1855, 2222
Bme1390I CCNGG 5 cut(s) 162, 403, 612, 654, 1070
Bme18I GGWCC 2 cut(s) 465, 2678
BmeT110I CYCGRG 1 cut(s) 1740
BmgBI CACGTC 1 cut(s) 247
BmgT120I GGNCC 5 cut(s) 465, 533, 608, 1403, 2678
BmiI GGNNCC 7 cut(s) 303, 510, 535, 592, 1629, 1717, 2680
BmrFI CCNGG 5 cut(s) 162, 403, 612, 654, 1070
BmrI ACTGGG 1 cut(s) 2526
BmsI GCATC 5 cut(s) 55, 829, 1414, 1811, 2119
BmuI ACTGGG 1 cut(s) 2526
BpiI GAAGAC 1 cut(s) 937
Bpu1102I GCTNAGC 1 cut(s) 690
Bpu14I TTCGAA 1 cut(s) 2343
BpuEI CTTGAG 2 cut(s) 392, 2038
BpuMI CCSGG 1 cut(s) 162
BsaBI GATNNNNATC 1 cut(s) 1488
BsaI GGTCTC 1 cut(s) 1895
BsaJI CCNNGG 7 cut(s) 611, 788, 925, 1431, 1719, 1739, 2314
BsaWI WCCGGW 1 cut(s) 587
BsaXI ACNNNNNCTCC 4 cut(s) 504, 534, 1875, 1905
Bsc4I CCNNNNNNNGG 5 cut(s) 530, 659, 1434, 1886, 2320
Bse118I RCCGGY 2 cut(s) 587, 648
Bse1I ACTGG 3 cut(s) 120, 478, 2532
Bse21I CCTNAGG 1 cut(s) 2414
Bse3DI GCAATG 3 cut(s) 87, 1170, 2077
Bse8I GATNNNNATC 1 cut(s) 1488
BseBI CCWGG 4 cut(s) 403, 612, 654, 1070
BseDI CCNNGG 7 cut(s) 611, 788, 925, 1431, 1719, 1739, 2314
BseGI GGATG 8 cut(s) 258, 772, 1078, 1429, 1750, 2001, 2368, 2434
BseJI GATNNNNATC 1 cut(s) 1488
BseLI CCNNNNNNNGG 5 cut(s) 530, 659, 1434, 1886, 2320
BseMI GCAATG 3 cut(s) 87, 1170, 2077
BseMII CTCAG 5 cut(s) 138, 681, 926, 1029, 1134
BseNI ACTGG 3 cut(s) 120, 478, 2532
BseRI GAGGAG 2 cut(s) 41, 1457
BseXI GCAGC 5 cut(s) 96, 131, 1270, 1837, 2207
BseYI CCCAGC 1 cut(s) 2246
BsgI GTGCAG 2 cut(s) 771, 1181
Bsh1236I CGCG 3 cut(s) 264, 456, 1321
BshFI GGCC 5 cut(s) 534, 610, 652, 1404, 1634
BshNI GGYRCC 1 cut(s) 590
BshTI ACCGGT 1 cut(s) 587
BsiHKCI CYCGRG 1 cut(s) 1740
BsiSI CCGG 4 cut(s) 161, 588, 649, 1631
BslFI GGGAC 3 cut(s) 177, 1244, 1517
BslI CCNNNNNNNGG 5 cut(s) 530, 659, 1434, 1886, 2320
BsmAI GTCTC 3 cut(s) 78, 1895, 2036
BsmFI GGGAC 3 cut(s) 177, 1244, 1517
BsmI GAATGC 2 cut(s) 1175, 1711
BsnI GGCC 5 cut(s) 534, 610, 652, 1404, 1634
Bso31I GGTCTC 1 cut(s) 1895
BsoBI CYCGRG 1 cut(s) 1740
Bsp119I TTCGAA 1 cut(s) 2343
Bsp1286I GDGCHC 1 cut(s) 1185
Bsp1407I TGTACA 2 cut(s) 2061, 2177
Bsp1720I GCTNAGC 1 cut(s) 690
Bsp19I CCATGG 1 cut(s) 925
BspACI CCGC 6 cut(s) 262, 406, 1619, 1798, 1854, 2081
BspANI GGCC 5 cut(s) 534, 610, 652, 1404, 1634
BspCNI CTCAG 5 cut(s) 139, 682, 927, 1030, 1135
BspFNI CGCG 3 cut(s) 264, 456, 1321
BspHI TCATGA 2 cut(s) 1687, 2446
BspLI GGNNCC 7 cut(s) 303, 510, 535, 592, 1629, 1717, 2680
BspMAI CTGCAG 1 cut(s) 1288
BspMI ACCTGC 1 cut(s) 1912
BspPI GGATC 6 cut(s) 329, 1001, 1389, 1622, 1635, 2519
BspT104I TTCGAA 1 cut(s) 2343
BspT107I GGYRCC 1 cut(s) 590
BspTI CTTAAG 1 cut(s) 350
BspTNI GGTCTC 1 cut(s) 1895
BsrDI GCAATG 3 cut(s) 87, 1170, 2077
BsrFI RCCGGY 2 cut(s) 587, 648
BsrGI TGTACA 2 cut(s) 2061, 2177
BsrI ACTGG 3 cut(s) 120, 478, 2532
BssAI RCCGGY 2 cut(s) 587, 648
BssECI CCNNGG 7 cut(s) 611, 788, 925, 1431, 1719, 1739, 2314
BssT1I CCWWGG 3 cut(s) 925, 1719, 2314
Bst2UI CCWGG 4 cut(s) 403, 612, 654, 1070
Bst4CI ACNGT 8 cut(s) 792, 956, 1055, 1667, 1702, 1846, 1923, 2694
Bst6I CTCTTC 2 cut(s) 836, 1522
BstAFI CTTAAG 1 cut(s) 350
BstAUI TGTACA 2 cut(s) 2061, 2177
BstBI TTCGAA 1 cut(s) 2343
BstC8I GCNNGC 8 cut(s) 82, 171, 650, 675, 1240, 1800, 2079, 2508
BstDSI CCRYGG 3 cut(s) 788, 925, 1431
BstENI CCTNNNNNAGG 1 cut(s) 2318
BstF5I GGATG 8 cut(s) 258, 772, 1078, 1429, 1750, 2001, 2368, 2434
BstFNI CGCG 3 cut(s) 264, 456, 1321
BstH2I RGCGCY 2 cut(s) 1261, 2247
BstHHI GCGC 6 cut(s) 266, 456, 619, 1023, 1260, 2246
BstMAI GTCTC 3 cut(s) 78, 1895, 2036
BstMWI GCNNNNNNNGC 5 cut(s) 394, 403, 616, 1292, 2243
BstNI CCWGG 4 cut(s) 403, 612, 654, 1070
BstNSI RCATGY 5 cut(s) 198, 452, 1242, 2049, 2062
BstSCI CCNGG 5 cut(s) 160, 401, 610, 652, 1068
BstSFI CTRYAG 3 cut(s) 1201, 1284, 2699
BstUI CGCG 3 cut(s) 264, 456, 1321
BstV1I GCAGC 5 cut(s) 96, 131, 1270, 1837, 2207
BstV2I GAAGAC 1 cut(s) 937
BstX2I RGATCY 5 cut(s) 346, 1006, 1627, 1760, 1951
BstXI CCANNNNNNTGG 2 cut(s) 489, 1819
BstYI RGATCY 5 cut(s) 346, 1006, 1627, 1760, 1951
Bsu36I CCTNAGG 1 cut(s) 2414
BsuRI GGCC 5 cut(s) 534, 610, 652, 1404, 1634
BtgI CCRYGG 3 cut(s) 788, 925, 1431
BtgZI GCGATG 2 cut(s) 954, 1219
BtrI CACGTC 1 cut(s) 247
BtsCI GGATG 8 cut(s) 258, 772, 1078, 1429, 1750, 2001, 2368, 2434
BtsIMutI CAGTG 3 cut(s) 440, 952, 1707
BveI ACCTGC 1 cut(s) 1912
Cac8I GCNNGC 8 cut(s) 82, 171, 650, 675, 1240, 1800, 2079, 2508
CaiI CAGNNNCTG 2 cut(s) 1850, 2555
CciI TCATGA 2 cut(s) 1687, 2446
CfoI GCGC 6 cut(s) 266, 456, 619, 1023, 1260, 2246
Cfr10I RCCGGY 2 cut(s) 587, 648
Cfr13I GGNCC 5 cut(s) 465, 533, 608, 1403, 2678
CseI GACGC 1 cut(s) 2208
Csp6I GTAC 8 cut(s) 250, 888, 1035, 1842, 2062, 2178, 2372, 2619
CspAI ACCGGT 1 cut(s) 587
CviQI GTAC 8 cut(s) 250, 888, 1035, 1842, 2062, 2178, 2372, 2619
DraI TTTAAA 2 cut(s) 1063, 2571
DrdI GACNNNNNNGTC 1 cut(s) 151
DseDI GACNNNNNNGTC 1 cut(s) 151
EaeI YGGCCR 1 cut(s) 1632
Eam1104I CTCTTC 2 cut(s) 836, 1522
EarI CTCTTC 2 cut(s) 836, 1522
EciI GGCGGA 1 cut(s) 421
Eco130I CCWWGG 3 cut(s) 925, 1719, 2314
Eco24I GRGCYC 1 cut(s) 1185
Eco31I GGTCTC 1 cut(s) 1895
Eco47I GGWCC 2 cut(s) 465, 2678
Eco47III AGCGCT 1 cut(s) 2245
Eco57I CTGAAG 4 cut(s) 464, 1299, 1337, 1583
Eco81I CCTNAGG 1 cut(s) 2414
Eco88I CYCGRG 1 cut(s) 1740
EcoNI CCTNNNNNAGG 1 cut(s) 2318
EcoO109I RGGNCCY 1 cut(s) 2678
EcoRI GAATTC 2 cut(s) 423, 1832
EcoRII CCWGG 4 cut(s) 401, 610, 652, 1068
EcoT14I CCWWGG 3 cut(s) 925, 1719, 2314
EcoT38I GRGCYC 1 cut(s) 1185
ErhI CCWWGG 3 cut(s) 925, 1719, 2314
FalI AAGNNNNNCTT 6 cut(s) 377, 409, 2118, 2150, 2606, 2638
FaqI GGGAC 3 cut(s) 177, 1244, 1517
FauI CCCGC 1 cut(s) 1791
FauNDI CATATG 1 cut(s) 1268
FbaI TGATCA 3 cut(s) 1489, 1747, 2395
FblI GTMKAC 2 cut(s) 900, 1900
Fnu4HI GCNGC 6 cut(s) 85, 120, 1284, 1851, 1854, 2221
FokI GGATG 8 cut(s) 245, 779, 1085, 1436, 1757, 2008, 2375, 2441
FriOI GRGCYC 1 cut(s) 1185
Fsp4HI GCNGC 6 cut(s) 85, 120, 1284, 1851, 1854, 2221
FspBI CTAG 3 cut(s) 389, 827, 2067
GlaI GCGC 6 cut(s) 265, 455, 618, 1022, 1259, 2245
GluI GCNGC 6 cut(s) 85, 120, 1284, 1851, 1854, 2221
GsaI CCCAGC 1 cut(s) 2250
HaeII RGCGCY 2 cut(s) 1261, 2247
HaeIII GGCC 5 cut(s) 534, 610, 652, 1404, 1634
HapII CCGG 4 cut(s) 161, 588, 649, 1631
HgaI GACGC 1 cut(s) 2208
HhaI GCGC 6 cut(s) 266, 456, 619, 1023, 1260, 2246
Hin6I GCGC 6 cut(s) 264, 454, 617, 1021, 1258, 2244
HinP1I GCGC 6 cut(s) 264, 454, 617, 1021, 1258, 2244
HincII GTYRAC 1 cut(s) 720
HindII GTYRAC 1 cut(s) 720
HpaII CCGG 4 cut(s) 161, 588, 649, 1631
HphI GGTGA 9 cut(s) 17, 170, 577, 1074, 1094, 1633, 2095, 2405, 2450
Hpy166II GTNNAC 9 cut(s) 178, 250, 720, 901, 1513, 1901, 2064, 2278, 2537
Hpy188III TCNNGA 9 cut(s) 14, 428, 1493, 1595, 1688, 1742, 2447, 2492, 2638
Hpy8I GTNNAC 9 cut(s) 178, 250, 720, 901, 1513, 1901, 2064, 2278, 2537
Hpy99I CGWCG 1 cut(s) 248
HpyAV CCTTC 4 cut(s) 1036, 1546, 1618, 2144
HpyCH4III ACNGT 8 cut(s) 792, 956, 1055, 1667, 1702, 1846, 1923, 2694
HpyCH4IV ACGT 1 cut(s) 246
HpyF10VI GCNNNNNNNGC 5 cut(s) 394, 403, 616, 1292, 2243
HpySE526I ACGT 1 cut(s) 246
HspAI GCGC 6 cut(s) 264, 454, 617, 1021, 1258, 2244
KroI GCCGGC 1 cut(s) 648
KroNI GCCGGC 1 cut(s) 650
Ksp22I TGATCA 3 cut(s) 1489, 1747, 2395
LmnI GCTCC 5 cut(s) 307, 817, 1247, 1721, 1972
Lsp1109I GCAGC 5 cut(s) 96, 131, 1270, 1837, 2207
LweI GCATC 5 cut(s) 55, 829, 1414, 1811, 2119
MaeI CTAG 3 cut(s) 389, 827, 2067
MaeII ACGT 1 cut(s) 246
MaeIII GTNAC 6 cut(s) 492, 583, 1100, 1210, 2186, 2694
MfeI CAATTG 3 cut(s) 624, 1710, 1751
MflI RGATCY 5 cut(s) 346, 1006, 1627, 1760, 1951
MhlI GDGCHC 1 cut(s) 1185
MluI ACGCGT 1 cut(s) 1319
MlyI GAGTC 2 cut(s) 853, 2675
MroNI GCCGGC 1 cut(s) 648
MroXI GAANNNNTTC 1 cut(s) 239
MslI CAYNNNNRTG 3 cut(s) 92, 1692, 2228
MspA1I CMGCKG 1 cut(s) 169
MspCI CTTAAG 1 cut(s) 350
MspI CCGG 4 cut(s) 161, 588, 649, 1631
MspR9I CCNGG 5 cut(s) 162, 403, 612, 654, 1070
MunI CAATTG 3 cut(s) 624, 1710, 1751
Mva1269I GAATGC 2 cut(s) 1175, 1711
MvaI CCWGG 4 cut(s) 403, 612, 654, 1070
MvnI CGCG 3 cut(s) 264, 456, 1321
MwoI GCNNNNNNNGC 5 cut(s) 394, 403, 616, 1292, 2243
NaeI GCCGGC 1 cut(s) 650
NciI CCSGG 1 cut(s) 162
NcoI CCATGG 1 cut(s) 925
NdeI CATATG 1 cut(s) 1268
NgoMIV GCCGGC 1 cut(s) 648
NlaIV GGNNCC 7 cut(s) 303, 510, 535, 592, 1629, 1717, 2680
NmuCI GTSAC 4 cut(s) 583, 1100, 2186, 2694
NspI RCATGY 5 cut(s) 198, 452, 1242, 2049, 2062
NspV TTCGAA 1 cut(s) 2343
PaeI GCATGC 1 cut(s) 1242
PagI TCATGA 2 cut(s) 1687, 2446
PciI ACATGT 1 cut(s) 2045
PctI GAATGC 2 cut(s) 1175, 1711
PdiI GCCGGC 1 cut(s) 650
PdmI GAANNNNTTC 1 cut(s) 239
PfeI GAWTC 8 cut(s) 797, 1079, 1111, 1307, 1874, 2353, 2452, 2552
PflMI CCANNNNNTGG 1 cut(s) 530
PinAI ACCGGT 1 cut(s) 587
PkrI GCNGC 6 cut(s) 86, 121, 1285, 1852, 1855, 2222
PleI GAGTC 2 cut(s) 852, 2674
PpsI GAGTC 2 cut(s) 852, 2674
PpuMI RGGWCCY 1 cut(s) 2678
PscI ACATGT 1 cut(s) 2045
PshBI ATTAAT 1 cut(s) 210
PsiI TTATAA 1 cut(s) 141
Psp5II RGGWCCY 1 cut(s) 2678
Psp6I CCWGG 4 cut(s) 401, 610, 652, 1068
PspFI CCCAGC 1 cut(s) 2246
PspGI CCWGG 4 cut(s) 401, 610, 652, 1068
PspN4I GGNNCC 7 cut(s) 303, 510, 535, 592, 1629, 1717, 2680
PspPI GGNCC 5 cut(s) 465, 533, 608, 1403, 2678
PspPPI RGGWCCY 1 cut(s) 2678
PstI CTGCAG 1 cut(s) 1288
PstNI CAGNNNCTG 2 cut(s) 1850, 2555
PsuI RGATCY 5 cut(s) 346, 1006, 1627, 1760, 1951
PvuII CAGCTG 1 cut(s) 169
RsaI GTAC 8 cut(s) 251, 889, 1036, 1843, 2063, 2179, 2373, 2620
RsaNI GTAC 8 cut(s) 250, 888, 1035, 1842, 2062, 2178, 2372, 2619
RseI CAYNNNNRTG 3 cut(s) 92, 1692, 2228
SatI GCNGC 6 cut(s) 85, 120, 1284, 1851, 1854, 2221
Sau96I GGNCC 5 cut(s) 465, 533, 608, 1403, 2678
SchI GAGTC 2 cut(s) 853, 2675
ScrFI CCNGG 5 cut(s) 162, 403, 612, 654, 1070
SduI GDGCHC 1 cut(s) 1185
SfaNI GCATC 5 cut(s) 55, 829, 1414, 1811, 2119
SfcI CTRYAG 3 cut(s) 1201, 1284, 2699
SfuI TTCGAA 1 cut(s) 2343
SgrAI CRCCGGYG 1 cut(s) 587
SinI GGWCC 2 cut(s) 465, 2678
SmiMI CAYNNNNRTG 3 cut(s) 92, 1692, 2228
SmlI CTYRAG 3 cut(s) 350, 371, 2053
SmoI CTYRAG 3 cut(s) 350, 371, 2053
SphI GCATGC 1 cut(s) 1242
SsiI CCGC 6 cut(s) 262, 406, 1619, 1798, 1854, 2081
SspMI CTAG 3 cut(s) 389, 827, 2067
StyD4I CCNGG 5 cut(s) 160, 401, 610, 652, 1068
StyI CCWWGG 3 cut(s) 925, 1719, 2314
TaaI ACNGT 8 cut(s) 792, 956, 1055, 1667, 1702, 1846, 1923, 2694
TaiI ACGT 1 cut(s) 249
TaqI TCGA 7 cut(s) 243, 324, 800, 1179, 2119, 2343, 2356
TatI WGTACW 4 cut(s) 249, 1034, 2061, 2177
TauI GCSGC 1 cut(s) 1856
TfiI GAWTC 8 cut(s) 797, 1079, 1111, 1307, 1874, 2353, 2452, 2552
TscAI CASTG 3 cut(s) 447, 959, 1707
TseFI GTSAC 4 cut(s) 583, 1100, 2186, 2694
TseI GCWGC 5 cut(s) 84, 119, 1283, 1850, 2220
Tsp45I GTSAC 4 cut(s) 583, 1100, 2186, 2694
TspGWI ACGGA 3 cut(s) 521, 1420, 1949
TspRI CASTG 3 cut(s) 447, 959, 1707
Van91I CCANNNNNTGG 1 cut(s) 530
Vha464I CTTAAG 1 cut(s) 350
VpaK11BI GGWCC 2 cut(s) 465, 2678
VspI ATTAAT 1 cut(s) 210
XagI CCTNNNNNAGG 1 cut(s) 2318
XapI RAATTY 6 cut(s) 423, 809, 915, 1598, 1832, 2408
XceI RCATGY 5 cut(s) 198, 452, 1242, 2049, 2062
XcmI CCANNNNNNNNNTGG 1 cut(s) 2639
XmiI GTMKAC 2 cut(s) 900, 1900
XmnI GAANNNNTTC 1 cut(s) 239
XspI CTAG 3 cut(s) 389, 827, 2067
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.