Chaperone protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g22170 FvH4_5g22170 FvH4_5g22170 FvH4_5g22170 |
| rosa_chinensis | RchiOBHm_Chr7g0209851 |
| rosa_laevigata | RLG00000003086 |
| rosa_multiflora | Rmu_sc0000557.1_g000009 Rmu_sc0018257.1_g000004 |
| rosa_roxburghii | Rroxscaffold_3G00248900 |
| rosa_rugosa | Rorug07G0116400 |
| rosa_samantha | Rh7AG250600 Rh7BG244700 Rh7CG266700 Rh7DG256400 |
| rosa_wichuraiana | Rw7G021230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 168 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 178 |
| Acc36I | ACCTGC | 1 cut(s) | 2077 |
| AccB1I | GGYRCC | 1 cut(s) | 755 |
| AccI | GTMKAC | 2 cut(s) | 1065, 2065 |
| AccII | CGCG | 3 cut(s) | 291, 486, 1486 |
| AccIII | TCCGGA | 1 cut(s) | 670 |
| AciI | CCGC | 6 cut(s) | 289, 436, 1784, 1963, 2019, 2246 |
| AclWI | GGATC | 6 cut(s) | 356, 1166, 1554, 1787, 1800, 1920 |
| AcsI | RAATTY | 5 cut(s) | 974, 1080, 1763, 1997, 2573 |
| AcuI | CTGAAG | 4 cut(s) | 494, 1464, 1502, 1748 |
| AfaI | GTAC | 7 cut(s) | 278, 561, 1201, 2008, 2228, 2344, 2538 |
| AfeI | AGCGCT | 1 cut(s) | 2410 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 824, 1599, 2051, 2485 |
| AflII | CTTAAG | 1 cut(s) | 380 |
| AflIII | ACRYGT | 4 cut(s) | 273, 562, 1484, 2210 |
| AgeI | ACCGGT | 1 cut(s) | 752 |
| AjiI | CACGTC | 1 cut(s) | 274 |
| AjnI | CCWGG | 4 cut(s) | 431, 775, 817, 1233 |
| Alw26I | GTCTC | 3 cut(s) | 105, 2060, 2201 |
| AlwI | GGATC | 6 cut(s) | 356, 1166, 1554, 1787, 1800, 1920 |
| Ama87I | CYCGRG | 1 cut(s) | 1905 |
| Aor13HI | TCCGGA | 1 cut(s) | 670 |
| Aor51HI | AGCGCT | 1 cut(s) | 2410 |
| AoxI | GGCC | 4 cut(s) | 697, 773, 815, 1567 |
| ApeKI | GCWGC | 8 cut(s) | 7, 111, 146, 508, 544, 1448, 2015, 2385 |
| ApoI | RAATTY | 5 cut(s) | 974, 1080, 1763, 1997, 2573 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1594, 1626 |
| AseI | ATTAAT | 1 cut(s) | 237 |
| AsiGI | ACCGGT | 1 cut(s) | 752 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 266 |
| AspLEI | GCGC | 6 cut(s) | 293, 486, 784, 1188, 1425, 2411 |
| AspS9I | GGNCC | 4 cut(s) | 630, 698, 773, 1568 |
| AsuC2I | CCSGG | 1 cut(s) | 189 |
| AsuHPI | GGTGA | 9 cut(s) | 44, 197, 535, 742, 1259, 1798, 2260, 2570, 2615 |
| AsuII | TTCGAA | 1 cut(s) | 2508 |
| AvaI | CYCGRG | 1 cut(s) | 1905 |
| AvaII | GGWCC | 1 cut(s) | 630 |
| AxyI | CCTNAGG | 1 cut(s) | 2579 |
| BamHI | GGATCC | 1 cut(s) | 1792 |
| BanI | GGYRCC | 1 cut(s) | 755 |
| BanII | GRGCYC | 1 cut(s) | 1350 |
| BbsI | GAAGAC | 1 cut(s) | 1102 |
| BbvI | GCAGC | 8 cut(s) | 19, 123, 158, 520, 556, 1435, 2002, 2372 |
| BceAI | ACGGC | 2 cut(s) | 983, 1248 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2297, 2331 |
| BciT130I | CCWGG | 4 cut(s) | 433, 777, 819, 1235 |
| BclI | TGATCA | 3 cut(s) | 1654, 1912, 2560 |
| BcnI | CCSGG | 1 cut(s) | 189 |
| BcoDI | GTCTC | 3 cut(s) | 105, 2060, 2201 |
| BfaI | CTAG | 5 cut(s) | 419, 689, 992, 2232, 2684 |
| BfmI | CTRYAG | 2 cut(s) | 1366, 1449 |
| BfoI | RGCGCY | 2 cut(s) | 1426, 2412 |
| BfrI | CTTAAG | 1 cut(s) | 380 |
| BfuAI | ACCTGC | 1 cut(s) | 2077 |
| BglII | AGATCT | 2 cut(s) | 376, 2116 |
| BisI | GCNGC | 9 cut(s) | 8, 112, 147, 509, 545, 1449, 2016, 2019, 2386 |
| BlpI | GCTNAGC | 1 cut(s) | 855 |
| BlsI | GCNGC | 9 cut(s) | 9, 113, 148, 510, 546, 1450, 2017, 2020, 2387 |
| Bme1390I | CCNGG | 5 cut(s) | 189, 433, 777, 819, 1235 |
| Bme18I | GGWCC | 1 cut(s) | 630 |
| BmeT110I | CYCGRG | 1 cut(s) | 1905 |
| BmgBI | CACGTC | 1 cut(s) | 274 |
| BmgT120I | GGNCC | 4 cut(s) | 630, 698, 773, 1568 |
| BmiI | GGNNCC | 7 cut(s) | 330, 675, 700, 757, 1570, 1794, 1882 |
| BmrFI | CCNGG | 5 cut(s) | 189, 433, 777, 819, 1235 |
| BmsI | GCATC | 5 cut(s) | 82, 994, 1579, 1976, 2284 |
| BpiI | GAAGAC | 1 cut(s) | 1102 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 855 |
| Bpu14I | TTCGAA | 1 cut(s) | 2508 |
| BpuEI | CTTGAG | 3 cut(s) | 422, 441, 2203 |
| BpuMI | CCSGG | 1 cut(s) | 189 |
| BsaAI | YACGTR | 1 cut(s) | 1675 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1653 |
| BsaI | GGTCTC | 1 cut(s) | 2060 |
| BsaJI | CCNNGG | 8 cut(s) | 618, 776, 953, 1090, 1596, 1884, 1904, 2479 |
| BsaWI | WCCGGW | 3 cut(s) | 514, 670, 752 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 26, 669, 699, 2040, 2070 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 824, 1599, 2051, 2485 |
| Bse118I | RCCGGY | 2 cut(s) | 752, 813 |
| Bse1I | ACTGG | 1 cut(s) | 643 |
| Bse21I | CCTNAGG | 1 cut(s) | 2579 |
| Bse3DI | GCAATG | 4 cut(s) | 17, 114, 1335, 2242 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1653 |
| BseAI | TCCGGA | 1 cut(s) | 670 |
| BseBI | CCWGG | 4 cut(s) | 433, 777, 819, 1235 |
| BseDI | CCNNGG | 8 cut(s) | 618, 776, 953, 1090, 1596, 1884, 1904, 2479 |
| BseGI | GGATG | 8 cut(s) | 285, 937, 1243, 1594, 1915, 2166, 2533, 2599 |
| BseJI | GATNNNNATC | 1 cut(s) | 1653 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 824, 1599, 2051, 2485 |
| BseMI | GCAATG | 4 cut(s) | 17, 114, 1335, 2242 |
| BseMII | CTCAG | 5 cut(s) | 165, 846, 1091, 1194, 1299 |
| BseNI | ACTGG | 1 cut(s) | 643 |
| BseRI | GAGGAG | 1 cut(s) | 68 |
| BseXI | GCAGC | 8 cut(s) | 19, 123, 158, 520, 556, 1435, 2002, 2372 |
| BseYI | CCCAGC | 1 cut(s) | 2411 |
| BsgI | GTGCAG | 2 cut(s) | 936, 1346 |
| Bsh1236I | CGCG | 3 cut(s) | 291, 486, 1486 |
| BshFI | GGCC | 4 cut(s) | 699, 775, 817, 1569 |
| BshNI | GGYRCC | 1 cut(s) | 755 |
| BshTI | ACCGGT | 1 cut(s) | 752 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1905 |
| BsiSI | CCGG | 5 cut(s) | 188, 515, 671, 753, 814 |
| BslFI | GGGAC | 4 cut(s) | 204, 1409, 1615, 1682 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 824, 1599, 2051, 2485 |
| BsmAI | GTCTC | 3 cut(s) | 105, 2060, 2201 |
| BsmFI | GGGAC | 4 cut(s) | 204, 1409, 1615, 1682 |
| BsmI | GAATGC | 2 cut(s) | 1340, 1876 |
| BsnI | GGCC | 4 cut(s) | 699, 775, 817, 1569 |
| Bso31I | GGTCTC | 1 cut(s) | 2060 |
| BsoBI | CYCGRG | 1 cut(s) | 1905 |
| Bsp119I | TTCGAA | 1 cut(s) | 2508 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1350 |
| Bsp13I | TCCGGA | 1 cut(s) | 670 |
| Bsp1407I | TGTACA | 3 cut(s) | 559, 2226, 2342 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 855 |
| Bsp19I | CCATGG | 1 cut(s) | 1090 |
| BspACI | CCGC | 6 cut(s) | 289, 436, 1784, 1963, 2019, 2246 |
| BspANI | GGCC | 4 cut(s) | 699, 775, 817, 1569 |
| BspCNI | CTCAG | 5 cut(s) | 166, 847, 1092, 1195, 1300 |
| BspEI | TCCGGA | 1 cut(s) | 670 |
| BspFNI | CGCG | 3 cut(s) | 291, 486, 1486 |
| BspHI | TCATGA | 1 cut(s) | 1852 |
| BspLI | GGNNCC | 7 cut(s) | 330, 675, 700, 757, 1570, 1794, 1882 |
| BspMAI | CTGCAG | 1 cut(s) | 1453 |
| BspMI | ACCTGC | 1 cut(s) | 2077 |
| BspPI | GGATC | 6 cut(s) | 356, 1166, 1554, 1787, 1800, 1920 |
| BspT104I | TTCGAA | 1 cut(s) | 2508 |
| BspT107I | GGYRCC | 1 cut(s) | 755 |
| BspTI | CTTAAG | 1 cut(s) | 380 |
| BspTNI | GGTCTC | 1 cut(s) | 2060 |
| BsrDI | GCAATG | 4 cut(s) | 17, 114, 1335, 2242 |
| BsrFI | RCCGGY | 2 cut(s) | 752, 813 |
| BsrGI | TGTACA | 3 cut(s) | 559, 2226, 2342 |
| BsrI | ACTGG | 1 cut(s) | 643 |
| BssAI | RCCGGY | 2 cut(s) | 752, 813 |
| BssECI | CCNNGG | 8 cut(s) | 618, 776, 953, 1090, 1596, 1884, 1904, 2479 |
| BssT1I | CCWWGG | 4 cut(s) | 618, 1090, 1884, 2479 |
| Bst2UI | CCWGG | 4 cut(s) | 433, 777, 819, 1235 |
| Bst4CI | ACNGT | 5 cut(s) | 957, 1832, 1867, 2011, 2088 |
| Bst6I | CTCTTC | 3 cut(s) | 707, 1001, 1687 |
| BstAFI | CTTAAG | 1 cut(s) | 380 |
| BstAUI | TGTACA | 3 cut(s) | 559, 2226, 2342 |
| BstBAI | YACGTR | 1 cut(s) | 1675 |
| BstBI | TTCGAA | 1 cut(s) | 2508 |
| BstC8I | GCNNGC | 7 cut(s) | 109, 198, 815, 840, 1405, 1965, 2244 |
| BstDSI | CCRYGG | 3 cut(s) | 953, 1090, 1596 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2483 |
| BstF5I | GGATG | 8 cut(s) | 285, 937, 1243, 1594, 1915, 2166, 2533, 2599 |
| BstFNI | CGCG | 3 cut(s) | 291, 486, 1486 |
| BstH2I | RGCGCY | 2 cut(s) | 1426, 2412 |
| BstHHI | GCGC | 6 cut(s) | 293, 486, 784, 1188, 1425, 2411 |
| BstMAI | GTCTC | 3 cut(s) | 105, 2060, 2201 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 424, 433, 623, 781, 1457, 2408 |
| BstNI | CCWGG | 4 cut(s) | 433, 777, 819, 1235 |
| BstNSI | RCATGY | 6 cut(s) | 225, 482, 566, 1407, 2214, 2227 |
| BstSCI | CCNGG | 5 cut(s) | 187, 431, 775, 817, 1233 |
| BstSFI | CTRYAG | 2 cut(s) | 1366, 1449 |
| BstSNI | TACGTA | 1 cut(s) | 1675 |
| BstUI | CGCG | 3 cut(s) | 291, 486, 1486 |
| BstV1I | GCAGC | 8 cut(s) | 19, 123, 158, 520, 556, 1435, 2002, 2372 |
| BstV2I | GAAGAC | 1 cut(s) | 1102 |
| BstX2I | RGATCY | 5 cut(s) | 376, 1171, 1792, 1925, 2116 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 654, 1984 |
| BstYI | RGATCY | 5 cut(s) | 376, 1171, 1792, 1925, 2116 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2579 |
| BsuRI | GGCC | 4 cut(s) | 699, 775, 817, 1569 |
| BtgI | CCRYGG | 3 cut(s) | 953, 1090, 1596 |
| BtgZI | GCGATG | 2 cut(s) | 1119, 1384 |
| BtrI | CACGTC | 1 cut(s) | 274 |
| BtsCI | GGATG | 8 cut(s) | 285, 937, 1243, 1594, 1915, 2166, 2533, 2599 |
| BtsIMutI | CAGTG | 2 cut(s) | 470, 1872 |
| BveI | ACCTGC | 1 cut(s) | 2077 |
| Cac8I | GCNNGC | 7 cut(s) | 109, 198, 815, 840, 1405, 1965, 2244 |
| CciI | TCATGA | 1 cut(s) | 1852 |
| CfoI | GCGC | 6 cut(s) | 293, 486, 784, 1188, 1425, 2411 |
| Cfr10I | RCCGGY | 2 cut(s) | 752, 813 |
| Cfr13I | GGNCC | 4 cut(s) | 630, 698, 773, 1568 |
| CseI | GACGC | 1 cut(s) | 2373 |
| Csp6I | GTAC | 7 cut(s) | 277, 560, 1200, 2007, 2227, 2343, 2537 |
| CspAI | ACCGGT | 1 cut(s) | 752 |
| CviQI | GTAC | 7 cut(s) | 277, 560, 1200, 2007, 2227, 2343, 2537 |
| DraI | TTTAAA | 1 cut(s) | 1228 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 178 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 178 |
| Eam1104I | CTCTTC | 3 cut(s) | 707, 1001, 1687 |
| EarI | CTCTTC | 3 cut(s) | 707, 1001, 1687 |
| EciI | GGCGGA | 1 cut(s) | 451 |
| Eco105I | TACGTA | 1 cut(s) | 1675 |
| Eco130I | CCWWGG | 4 cut(s) | 618, 1090, 1884, 2479 |
| Eco24I | GRGCYC | 1 cut(s) | 1350 |
| Eco31I | GGTCTC | 1 cut(s) | 2060 |
| Eco47I | GGWCC | 1 cut(s) | 630 |
| Eco47III | AGCGCT | 1 cut(s) | 2410 |
| Eco57I | CTGAAG | 4 cut(s) | 494, 1464, 1502, 1748 |
| Eco81I | CCTNAGG | 1 cut(s) | 2579 |
| Eco88I | CYCGRG | 1 cut(s) | 1905 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2483 |
| EcoRI | GAATTC | 1 cut(s) | 1997 |
| EcoRII | CCWGG | 4 cut(s) | 431, 775, 817, 1233 |
| EcoT14I | CCWWGG | 4 cut(s) | 618, 1090, 1884, 2479 |
| EcoT22I | ATGCAT | 1 cut(s) | 1876 |
| EcoT38I | GRGCYC | 1 cut(s) | 1350 |
| ErhI | CCWWGG | 4 cut(s) | 618, 1090, 1884, 2479 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 407, 439, 2283, 2315 |
| FaqI | GGGAC | 4 cut(s) | 204, 1409, 1615, 1682 |
| FauI | CCCGC | 1 cut(s) | 1956 |
| FauNDI | CATATG | 1 cut(s) | 1433 |
| FbaI | TGATCA | 3 cut(s) | 1654, 1912, 2560 |
| FblI | GTMKAC | 2 cut(s) | 1065, 2065 |
| Fnu4HI | GCNGC | 9 cut(s) | 8, 112, 147, 509, 545, 1449, 2016, 2019, 2386 |
| FokI | GGATG | 8 cut(s) | 272, 944, 1250, 1601, 1922, 2173, 2540, 2606 |
| FriOI | GRGCYC | 1 cut(s) | 1350 |
| Fsp4HI | GCNGC | 9 cut(s) | 8, 112, 147, 509, 545, 1449, 2016, 2019, 2386 |
| FspBI | CTAG | 5 cut(s) | 419, 689, 992, 2232, 2684 |
| GlaI | GCGC | 6 cut(s) | 292, 485, 783, 1187, 1424, 2410 |
| GluI | GCNGC | 9 cut(s) | 8, 112, 147, 509, 545, 1449, 2016, 2019, 2386 |
| GsaI | CCCAGC | 1 cut(s) | 2415 |
| HaeII | RGCGCY | 2 cut(s) | 1426, 2412 |
| HaeIII | GGCC | 4 cut(s) | 699, 775, 817, 1569 |
| HapII | CCGG | 5 cut(s) | 188, 515, 671, 753, 814 |
| HgaI | GACGC | 1 cut(s) | 2373 |
| HhaI | GCGC | 6 cut(s) | 293, 486, 784, 1188, 1425, 2411 |
| Hin6I | GCGC | 6 cut(s) | 291, 484, 782, 1186, 1423, 2409 |
| HinP1I | GCGC | 6 cut(s) | 291, 484, 782, 1186, 1423, 2409 |
| HincII | GTYRAC | 2 cut(s) | 594, 885 |
| HindII | GTYRAC | 2 cut(s) | 594, 885 |
| HinfI | GANTC | 8 cut(s) | 1009, 1244, 1276, 1472, 2039, 2518, 2617, 2712 |
| HpaI | GTTAAC | 1 cut(s) | 594 |
| HpaII | CCGG | 5 cut(s) | 188, 515, 671, 753, 814 |
| HphI | GGTGA | 9 cut(s) | 44, 197, 535, 742, 1259, 1798, 2260, 2570, 2615 |
| Hpy166II | GTNNAC | 9 cut(s) | 205, 277, 594, 885, 1066, 1678, 2066, 2229, 2443 |
| Hpy8I | GTNNAC | 9 cut(s) | 205, 277, 594, 885, 1066, 1678, 2066, 2229, 2443 |
| Hpy99I | CGWCG | 2 cut(s) | 16, 275 |
| HpyAV | CCTTC | 3 cut(s) | 1711, 1783, 2309 |
| HpyCH4III | ACNGT | 5 cut(s) | 957, 1832, 1867, 2011, 2088 |
| HpyCH4IV | ACGT | 2 cut(s) | 273, 1674 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 424, 433, 623, 781, 1457, 2408 |
| HpySE526I | ACGT | 2 cut(s) | 273, 1674 |
| HspAI | GCGC | 6 cut(s) | 291, 484, 782, 1186, 1423, 2409 |
| Kpn2I | TCCGGA | 1 cut(s) | 670 |
| KroI | GCCGGC | 1 cut(s) | 813 |
| KroNI | GCCGGC | 1 cut(s) | 815 |
| Ksp22I | TGATCA | 3 cut(s) | 1654, 1912, 2560 |
| KspAI | GTTAAC | 1 cut(s) | 594 |
| LmnI | GCTCC | 6 cut(s) | 4, 334, 982, 1412, 1886, 2137 |
| Lsp1109I | GCAGC | 8 cut(s) | 19, 123, 158, 520, 556, 1435, 2002, 2372 |
| LweI | GCATC | 5 cut(s) | 82, 994, 1579, 1976, 2284 |
| MaeI | CTAG | 5 cut(s) | 419, 689, 992, 2232, 2684 |
| MaeII | ACGT | 2 cut(s) | 273, 1674 |
| MaeIII | GTNAC | 6 cut(s) | 358, 657, 748, 1265, 1375, 2351 |
| MfeI | CAATTG | 2 cut(s) | 789, 1916 |
| MflI | RGATCY | 5 cut(s) | 376, 1171, 1792, 1925, 2116 |
| MhlI | GDGCHC | 1 cut(s) | 1350 |
| MluI | ACGCGT | 1 cut(s) | 1484 |
| MlyI | GAGTC | 1 cut(s) | 1018 |
| Mph1103I | ATGCAT | 1 cut(s) | 1876 |
| MroI | TCCGGA | 1 cut(s) | 670 |
| MroNI | GCCGGC | 1 cut(s) | 813 |
| MroXI | GAANNNNTTC | 1 cut(s) | 266 |
| MslI | CAYNNNNRTG | 3 cut(s) | 119, 1857, 2393 |
| MspA1I | CMGCKG | 1 cut(s) | 196 |
| MspCI | CTTAAG | 1 cut(s) | 380 |
| MspI | CCGG | 5 cut(s) | 188, 515, 671, 753, 814 |
| MspR9I | CCNGG | 5 cut(s) | 189, 433, 777, 819, 1235 |
| MunI | CAATTG | 2 cut(s) | 789, 1916 |
| Mva1269I | GAATGC | 2 cut(s) | 1340, 1876 |
| MvaI | CCWGG | 4 cut(s) | 433, 777, 819, 1235 |
| MvnI | CGCG | 3 cut(s) | 291, 486, 1486 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 424, 433, 623, 781, 1457, 2408 |
| NaeI | GCCGGC | 1 cut(s) | 815 |
| NciI | CCSGG | 1 cut(s) | 189 |
| NcoI | CCATGG | 1 cut(s) | 1090 |
| NdeI | CATATG | 1 cut(s) | 1433 |
| NgoMIV | GCCGGC | 1 cut(s) | 813 |
| NlaIV | GGNNCC | 7 cut(s) | 330, 675, 700, 757, 1570, 1794, 1882 |
| NmuCI | GTSAC | 3 cut(s) | 748, 1265, 2351 |
| NsiI | ATGCAT | 1 cut(s) | 1876 |
| NspI | RCATGY | 6 cut(s) | 225, 482, 566, 1407, 2214, 2227 |
| NspV | TTCGAA | 1 cut(s) | 2508 |
| PaeI | GCATGC | 1 cut(s) | 1407 |
| PagI | TCATGA | 1 cut(s) | 1852 |
| PciI | ACATGT | 2 cut(s) | 562, 2210 |
| PctI | GAATGC | 2 cut(s) | 1340, 1876 |
| PdiI | GCCGGC | 1 cut(s) | 815 |
| PdmI | GAANNNNTTC | 1 cut(s) | 266 |
| PfeI | GAWTC | 7 cut(s) | 1244, 1276, 1472, 2039, 2518, 2617, 2712 |
| PinAI | ACCGGT | 1 cut(s) | 752 |
| PkrI | GCNGC | 9 cut(s) | 9, 113, 148, 510, 546, 1450, 2017, 2020, 2387 |
| PleI | GAGTC | 1 cut(s) | 1017 |
| PpsI | GAGTC | 1 cut(s) | 1017 |
| Ppu21I | YACGTR | 1 cut(s) | 1675 |
| PscI | ACATGT | 2 cut(s) | 562, 2210 |
| PshBI | ATTAAT | 1 cut(s) | 237 |
| PsiI | TTATAA | 1 cut(s) | 168 |
| Psp6I | CCWGG | 4 cut(s) | 431, 775, 817, 1233 |
| PspFI | CCCAGC | 1 cut(s) | 2411 |
| PspGI | CCWGG | 4 cut(s) | 431, 775, 817, 1233 |
| PspN4I | GGNNCC | 7 cut(s) | 330, 675, 700, 757, 1570, 1794, 1882 |
| PspPI | GGNCC | 4 cut(s) | 630, 698, 773, 1568 |
| PstI | CTGCAG | 1 cut(s) | 1453 |
| PsuI | RGATCY | 5 cut(s) | 376, 1171, 1792, 1925, 2116 |
| PvuII | CAGCTG | 1 cut(s) | 196 |
| RsaI | GTAC | 7 cut(s) | 278, 561, 1201, 2008, 2228, 2344, 2538 |
| RsaNI | GTAC | 7 cut(s) | 277, 560, 1200, 2007, 2227, 2343, 2537 |
| RseI | CAYNNNNRTG | 3 cut(s) | 119, 1857, 2393 |
| SatI | GCNGC | 9 cut(s) | 8, 112, 147, 509, 545, 1449, 2016, 2019, 2386 |
| Sau96I | GGNCC | 4 cut(s) | 630, 698, 773, 1568 |
| SchI | GAGTC | 1 cut(s) | 1018 |
| ScrFI | CCNGG | 5 cut(s) | 189, 433, 777, 819, 1235 |
| SduI | GDGCHC | 1 cut(s) | 1350 |
| SfaNI | GCATC | 5 cut(s) | 82, 994, 1579, 1976, 2284 |
| SfcI | CTRYAG | 2 cut(s) | 1366, 1449 |
| SfuI | TTCGAA | 1 cut(s) | 2508 |
| SgrAI | CRCCGGYG | 1 cut(s) | 752 |
| SinI | GGWCC | 1 cut(s) | 630 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 119, 1857, 2393 |
| SmlI | CTYRAG | 4 cut(s) | 380, 401, 456, 2218 |
| SmoI | CTYRAG | 4 cut(s) | 380, 401, 456, 2218 |
| SnaBI | TACGTA | 1 cut(s) | 1675 |
| SphI | GCATGC | 1 cut(s) | 1407 |
| SsiI | CCGC | 6 cut(s) | 289, 436, 1784, 1963, 2019, 2246 |
| SspMI | CTAG | 5 cut(s) | 419, 689, 992, 2232, 2684 |
| StyD4I | CCNGG | 5 cut(s) | 187, 431, 775, 817, 1233 |
| StyI | CCWWGG | 4 cut(s) | 618, 1090, 1884, 2479 |
| TaaI | ACNGT | 5 cut(s) | 957, 1832, 1867, 2011, 2088 |
| TaiI | ACGT | 2 cut(s) | 276, 1677 |
| TaqI | TCGA | 6 cut(s) | 270, 351, 1344, 2284, 2508, 2521 |
| TatI | WGTACW | 5 cut(s) | 276, 559, 1199, 2226, 2342 |
| TauI | GCSGC | 1 cut(s) | 2021 |
| TfiI | GAWTC | 7 cut(s) | 1244, 1276, 1472, 2039, 2518, 2617, 2712 |
| TscAI | CASTG | 2 cut(s) | 477, 1872 |
| TseFI | GTSAC | 3 cut(s) | 748, 1265, 2351 |
| TseI | GCWGC | 8 cut(s) | 7, 111, 146, 508, 544, 1448, 2015, 2385 |
| Tsp45I | GTSAC | 3 cut(s) | 748, 1265, 2351 |
| TspGWI | ACGGA | 2 cut(s) | 1585, 2114 |
| TspRI | CASTG | 2 cut(s) | 477, 1872 |
| Vha464I | CTTAAG | 1 cut(s) | 380 |
| VpaK11BI | GGWCC | 1 cut(s) | 630 |
| VspI | ATTAAT | 1 cut(s) | 237 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2483 |
| XapI | RAATTY | 5 cut(s) | 974, 1080, 1763, 1997, 2573 |
| XceI | RCATGY | 6 cut(s) | 225, 482, 566, 1407, 2214, 2227 |
| XmiI | GTMKAC | 2 cut(s) | 1065, 2065 |
| XmnI | GAANNNNTTC | 1 cut(s) | 266 |
| XspI | CTAG | 5 cut(s) | 419, 689, 992, 2232, 2684 |
| Zsp2I | ATGCAT | 1 cut(s) | 1876 |