Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001102.1

Orthogroup ID

OG0021640

Physical Location & Seq

Genomic Coordinates Forward (+)

57764 .. 60557

Gene Structure 2794 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

atgaacaggaattggatttttgatctttttagatatcaggacatatccttgtggctcactgagtgccatatggattccacaggtttgagtacagatagcttgtatgacgcggggttccctggggctcttgctcttggtgatgtagtgtgtggaatggcagctgtgaagataacttccaaggacacaattttttggttgcgatcccacactgctgcagaaatcctatggggtggtgcaaaacatgatccggatgagaagaacgatggctggaaaatgcaccccagatcatcattcaaggctttgcttgaagttgtgaagacaaggagcttaccttggaaggactatgaaatggatgcaattcattctttgcagcttattctgaggaatgcattcaaggatgtgggaaccatggatgtaaacaacagtggaatccagatgaggcttagtgacttgaaagttgatggtatgcaagaactggaagcaataacaggtgagatggtccggttgattgaaacagcaacagtgccaattttggcagttgatgttgatgggtcagttaatgggtggaacacaaaaatttccgagttaactggtcttcctgttgatgaagcaattggaaagaatttactcacacttgtggaagaatcttcaactagcatggtggaaaggatgctggagttggcattgcaaggcaaagaggaacaaaacatccaattcgagataaaaacacacggtgctaggactgactttggtcccatcaggttagttgtgaatgcttgtgcaagcagagatattcatgaaaaagttgtgggagtgtgttttgtggcccaagatatcactggtcagaagactgtgatggacaagttcactcgcattgaaggtgattataaagcaattgtacaaaacccaagtccattgatccccccaatatttggcactgatgaatttggctggtgttctgagtggaatccagcaatgactaagttaactgggtggaaacgagaggaggtaatggataaaatgctgttgggggaggtttttgggatcaacatggcttgttgtcctgtcaagaatcaagaagcttttgtaaatcttggtgttgtaatcaatcacgccatgactggtcaggtgtctgaaaggttccttttggaagcccgaaatgctggttgccgtacatcgttcgaggcagatagataccttgaacagaaaaggaaaagagaagctgaagaaaatgcccgcagagcaagggaaagtggcgaggttggcccaagttgtcagggaaatccaaatttaagctccgccagtgaaatggatatattgggtgtttatggatcagatttactgtctgaagctgagaaacgtctctgcagcgaaatggggttacccccacccttttaccttaagatggaagaagtcatctcaattgaaatcttcagcggcaatgtcaccaaaagatcagatgcccatcacctgttcaagattgaacctagtaaaattgacagggtctacggtcgacatgcttgtgaaaaggggattgcacagtcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0006417 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007275 GO:0007602 GO:0008150 GO:0008152 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009638 GO:0009639 GO:0009640 GO:0009642 GO:0009791 GO:0009881 GO:0009883 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010017 GO:0010018 GO:0010114 GO:0010161 GO:0010201 GO:0010203 GO:0010218 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010608 GO:0010629 GO:0016301 GO:0016310 GO:0016604 GO:0016740 GO:0016772 GO:0016773 GO:0017148 GO:0019222 GO:0019538 GO:0023052 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031516 GO:0031974 GO:0031981 GO:0032268 GO:0032269 GO:0032501 GO:0032502 GO:0034248 GO:0034249 GO:0036211 GO:0038023 GO:0042221 GO:0042802 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046685 GO:0048519 GO:0048523 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051606 GO:0051716 GO:0055122 GO:0060089 GO:0060255 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0071491 GO:0071704 GO:0080090 GO:0097159 GO:0104004 GO:0140096 GO:1901363 GO:1901564 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

GAF HATPase_c HisKA PAS PAS_2 PHY

Protein Analysis

515

Amino Acids

57.47

Weight (kDa)

5.21

Isoelectric Point (pI)

45.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PHY	PF00360	13 - 132	9.6e-34	Phytochrome region
PAS	PF00989	165 - 279	7e-24	PAS fold
PAS_4	PF08448	173 - 283	6.2e-08	PAS fold
PAS	PF00989	295 - 418	9e-16	PAS fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0021640)

Species	Orthologous Gene IDs
rosa_multiflora	Rmu_co8128386.1_g000001 Rmu_sc0001102.1_g000013
rosa_samantha	Rh3DG331400 Rh5CG202900 Rh7DG365900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	888
AccB7I	CCANNNNNTGG	1 cut(s)	932
AccI	GTMKAC	2 cut(s)	1506, 1513
AccII	CGCG	1 cut(s)	110
AccIII	TCCGGA	1 cut(s)	247
AciI	CCGC	4 cut(s)	110, 1237, 1299, 1437
AclWI	GGATC	5 cut(s)	195, 239, 913, 1052, 1339
AcsI	RAATTY	4 cut(s)	576, 622, 944, 1288
AcuI	CTGAAG	3 cut(s)	1245, 1368, 1417
AdeI	CACNNNGTG	2 cut(s)	63, 734
AfaI	GTAC	3 cut(s)	91, 900, 1174
AfiI	CCNNNNNNNGG	2 cut(s)	932, 1405
AflII	CTTAAG	1 cut(s)	1400
AjnI	CCWGG	1 cut(s)	118
AleI	CACNNNNGTG	1 cut(s)	635
AloI	GAACNNNNNNTCC	2 cut(s)	693, 725
AluBI	AGCT	8 cut(s)	99, 161, 327, 373, 1082, 1223, 1296, 1352
AluI	AGCT	8 cut(s)	99, 161, 327, 373, 1082, 1223, 1296, 1352
Alw26I	GTCTC	1 cut(s)	1367
AlwI	GGATC	5 cut(s)	195, 239, 913, 1052, 1339
Aor13HI	TCCGGA	1 cut(s)	247
AoxI	GGCC	2 cut(s)	825, 1264
ApeKI	GCWGC	4 cut(s)	158, 212, 370, 1368
ApoI	RAATTY	4 cut(s)	576, 622, 944, 1288
ArsI	GACNNNNNNTTYG	2 cut(s)	895, 927
Asp700I	GAANNNNTTC	1 cut(s)	389
AspS9I	GGNCC	4 cut(s)	499, 752, 826, 1265
AsuHPI	GGTGA	5 cut(s)	149, 503, 893, 1438, 1460
AvaII	GGWCC	2 cut(s)	499, 752
BanII	GRGCYC	1 cut(s)	127
BbsI	GAAGAC	3 cut(s)	323, 587, 854
BbvI	GCAGC	4 cut(s)	170, 199, 382, 1380
BccI	CCATC	8 cut(s)	257, 455, 490, 542, 764, 850, 1399, 1473
BceAI	ACGGC	1 cut(s)	1155
BciT130I	CCWGG	1 cut(s)	120
BcoDI	GTCTC	1 cut(s)	1367
BfaI	CTAG	3 cut(s)	654, 738, 1488
BfmI	CTRYAG	2 cut(s)	213, 1366
BfrI	CTTAAG	1 cut(s)	1400
BisI	GCNGC	5 cut(s)	159, 213, 371, 1369, 1438
BlsI	GCNGC	5 cut(s)	160, 214, 372, 1370, 1439
Bme1390I	CCNGG	1 cut(s)	120
Bme18I	GGWCC	2 cut(s)	499, 752
BmgT120I	GGNCC	4 cut(s)	499, 752, 826, 1265
BmiI	GGNNCC	4 cut(s)	116, 406, 754, 1142
BmrFI	CCNGG	1 cut(s)	120
BmrI	ACTGGG	1 cut(s)	999
BmsI	GCATC	3 cut(s)	343, 660, 1450
BmuI	ACTGGG	1 cut(s)	999
BoxI	GACNNNNGTC	1 cut(s)	750
BpiI	GAAGAC	3 cut(s)	323, 587, 854
BpmI	CTGGAG	1 cut(s)	695
BsaBI	GATNNNNATC	1 cut(s)	1464
BsaJI	CCNNGG	5 cut(s)	118, 119, 177, 332, 408
BsaWI	WCCGGW	2 cut(s)	247, 501
Bsc4I	CCNNNNNNNGG	2 cut(s)	932, 1405
Bse1I	ACTGG	6 cut(s)	480, 595, 844, 994, 1126, 1302
Bse3DI	GCAATG	3 cut(s)	683, 981, 1447
Bse8I	GATNNNNATC	1 cut(s)	1464
BseAI	TCCGGA	1 cut(s)	247
BseBI	CCWGG	1 cut(s)	120
BseDI	CCNNGG	5 cut(s)	118, 119, 177, 332, 408
BseGI	GGATG	6 cut(s)	256, 358, 403, 418, 675, 708
BseJI	GATNNNNATC	1 cut(s)	1464
BseLI	CCNNNNNNNGG	2 cut(s)	932, 1405
BseMI	GCAATG	3 cut(s)	683, 981, 1447
BseMII	CTCAG	4 cut(s)	51, 371, 951, 1344
BseNI	ACTGG	6 cut(s)	480, 595, 844, 994, 1126, 1302
BseRI	GAGGAG	1 cut(s)	1019
BseXI	GCAGC	4 cut(s)	170, 199, 382, 1380
Bsh1236I	CGCG	1 cut(s)	110
Bsh1285I	CGRYCG	1 cut(s)	1513
BshFI	GGCC	2 cut(s)	827, 1266
BsiEI	CGRYCG	1 cut(s)	1513
BsiSI	CCGG	2 cut(s)	248, 502
BslFI	GGGAC	1 cut(s)	738
BslI	CCNNNNNNNGG	2 cut(s)	932, 1405
BsmAI	GTCTC	1 cut(s)	1367
BsmBI	CGTCTC	1 cut(s)	1367
BsmFI	GGGAC	1 cut(s)	738
BsmI	GAATGC	3 cut(s)	389, 391, 778
BsnI	GGCC	2 cut(s)	827, 1266
Bsp1286I	GDGCHC	1 cut(s)	127
Bsp13I	TCCGGA	1 cut(s)	247
Bsp1407I	TGTACA	1 cut(s)	898
Bsp143I	GATC	8 cut(s)	22, 200, 244, 284, 918, 1044, 1331, 1454
Bsp19I	CCATGG	1 cut(s)	408
BspACI	CCGC	4 cut(s)	110, 1237, 1299, 1437
BspANI	GGCC	2 cut(s)	827, 1266
BspCNI	CTCAG	4 cut(s)	52, 372, 952, 1345
BspEI	TCCGGA	1 cut(s)	247
BspFNI	CGCG	1 cut(s)	110
BspHI	TCATGA	1 cut(s)	796
BspLI	GGNNCC	4 cut(s)	116, 406, 754, 1142
BspMAI	CTGCAG	2 cut(s)	217, 1370
BspPI	GGATC	5 cut(s)	195, 239, 913, 1052, 1339
BspTI	CTTAAG	1 cut(s)	1400
BsrDI	GCAATG	3 cut(s)	683, 981, 1447
BsrGI	TGTACA	1 cut(s)	898
BsrI	ACTGG	6 cut(s)	480, 595, 844, 994, 1126, 1302
BssECI	CCNNGG	5 cut(s)	118, 119, 177, 332, 408
BssMI	GATC	8 cut(s)	22, 200, 244, 284, 918, 1044, 1331, 1454
BssT1I	CCWWGG	3 cut(s)	177, 332, 408
Bst2UI	CCWGG	1 cut(s)	120
Bst4CI	ACNGT	7 cut(s)	425, 523, 734, 853, 1344, 1511, 1542
BstAFI	CTTAAG	1 cut(s)	1400
BstAUI	TGTACA	1 cut(s)	898
BstC8I	GCNNGC	2 cut(s)	784, 1237
BstDEI	CTNAG	6 cut(s)	60, 380, 443, 960, 981, 1353
BstDSI	CCRYGG	1 cut(s)	408
BstEII	GGTNACC	1 cut(s)	1380
BstF5I	GGATG	6 cut(s)	256, 358, 403, 418, 675, 708
BstFNI	CGCG	1 cut(s)	110
BstKTI	GATC	8 cut(s)	25, 203, 247, 287, 921, 1047, 1334, 1457
BstMAI	GTCTC	1 cut(s)	1367
BstMBI	GATC	8 cut(s)	22, 200, 244, 284, 918, 1044, 1331, 1454
BstMCI	CGRYCG	1 cut(s)	1513
BstMWI	GCNNNNNNNGC	3 cut(s)	1160, 1241, 1263
BstNI	CCWGG	1 cut(s)	120
BstNSI	RCATGY	1 cut(s)	1520
BstPAI	GACNNNNGTC	1 cut(s)	750
BstPI	GGTNACC	1 cut(s)	1380
BstSCI	CCNGG	1 cut(s)	118
BstSFI	CTRYAG	2 cut(s)	213, 1366
BstUI	CGCG	1 cut(s)	110
BstV1I	GCAGC	4 cut(s)	170, 199, 382, 1380
BstV2I	GAAGAC	3 cut(s)	323, 587, 854
BstXI	CCANNNNNNTGG	1 cut(s)	1309
BsuRI	GGCC	2 cut(s)	827, 1266
BtgI	CCRYGG	1 cut(s)	408
BtsCI	GGATG	6 cut(s)	256, 358, 403, 418, 675, 708
BtsI	GCAGTG	1 cut(s)	207
BtsIMutI	CAGTG	7 cut(s)	57, 207, 430, 528, 837, 936, 1309
Cac8I	GCNNGC	2 cut(s)	784, 1237
CciI	TCATGA	1 cut(s)	796
Cfr13I	GGNCC	4 cut(s)	499, 752, 826, 1265
CseI	GACGC	1 cut(s)	116
Csp6I	GTAC	3 cut(s)	90, 899, 1173
CviAII	CATG	7 cut(s)	242, 409, 658, 797, 1051, 1117, 1517
CviQI	GTAC	3 cut(s)	90, 899, 1173
DdeI	CTNAG	6 cut(s)	60, 380, 443, 960, 981, 1353
DpnI	GATC	8 cut(s)	24, 202, 246, 286, 920, 1046, 1333, 1456
DpnII	GATC	8 cut(s)	22, 200, 244, 284, 918, 1044, 1331, 1454
DraIII	CACNNNGTG	2 cut(s)	63, 734
EciI	GGCGGA	1 cut(s)	1288
Eco130I	CCWWGG	3 cut(s)	177, 332, 408
Eco24I	GRGCYC	1 cut(s)	127
Eco32I	GATATC	2 cut(s)	35, 835
Eco47I	GGWCC	2 cut(s)	499, 752
Eco57I	CTGAAG	3 cut(s)	1245, 1368, 1417
Eco91I	GGTNACC	1 cut(s)	1380
EcoO65I	GGTNACC	1 cut(s)	1380
EcoRII	CCWGG	1 cut(s)	118
EcoRV	GATATC	2 cut(s)	35, 835
EcoT14I	CCWWGG	3 cut(s)	177, 332, 408
EcoT22I	ATGCAT	1 cut(s)	391
EcoT38I	GRGCYC	1 cut(s)	127
ErhI	CCWWGG	3 cut(s)	177, 332, 408
Esp3I	CGTCTC	1 cut(s)	1367
FaeI	CATG	7 cut(s)	245, 412, 661, 800, 1054, 1120, 1520
FaqI	GGGAC	1 cut(s)	738
FatI	CATG	7 cut(s)	241, 408, 657, 796, 1050, 1116, 1516
FauI	CCCGC	2 cut(s)	103, 1244
FauNDI	CATATG	1 cut(s)	69
FblI	GTMKAC	2 cut(s)	1506, 1513
Fnu4HI	GCNGC	5 cut(s)	159, 213, 371, 1369, 1438
FokI	GGATG	6 cut(s)	263, 365, 410, 425, 682, 695
FriOI	GRGCYC	1 cut(s)	127
Fsp4HI	GCNGC	5 cut(s)	159, 213, 371, 1369, 1438
FspBI	CTAG	3 cut(s)	654, 738, 1488
GluI	GCNGC	5 cut(s)	159, 213, 371, 1369, 1438
GsuI	CTGGAG	1 cut(s)	695
HaeIII	GGCC	2 cut(s)	827, 1266
HapII	CCGG	2 cut(s)	248, 502
HgaI	GACGC	1 cut(s)	116
Hin1II	CATG	7 cut(s)	245, 412, 661, 800, 1054, 1120, 1520
HincII	GTYRAC	3 cut(s)	588, 987, 1514
HindII	GTYRAC	3 cut(s)	588, 987, 1514
HindIII	AAGCTT	1 cut(s)	1080
HinfI	GANTC	5 cut(s)	74, 429, 644, 967, 1072
HpaI	GTTAAC	2 cut(s)	588, 987
HpaII	CCGG	2 cut(s)	248, 502
HphI	GGTGA	5 cut(s)	149, 503, 893, 1438, 1460
Hpy166II	GTNNAC	6 cut(s)	418, 588, 867, 987, 1507, 1514
Hpy188I	TCNGA	8 cut(s)	381, 583, 846, 961, 1135, 1336, 1348, 1459
Hpy188III	TCNNGA	9 cut(s)	38, 248, 433, 718, 797, 1069, 1076, 1477, 1545
Hpy8I	GTNNAC	6 cut(s)	418, 588, 867, 987, 1507, 1514
HpyAV	CCTTC	2 cut(s)	331, 872
HpyCH4III	ACNGT	7 cut(s)	425, 523, 734, 853, 1344, 1511, 1542
HpyCH4IV	ACGT	1 cut(s)	1360
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1160, 1241, 1263
HpyF3I	CTNAG	6 cut(s)	60, 380, 443, 960, 981, 1353
HpySE526I	ACGT	1 cut(s)	1360
Hsp92II	CATG	7 cut(s)	245, 412, 661, 800, 1054, 1120, 1520
Kpn2I	TCCGGA	1 cut(s)	247
KspAI	GTTAAC	2 cut(s)	588, 987
Kzo9I	GATC	8 cut(s)	22, 200, 244, 284, 918, 1044, 1331, 1454
LmnI	GCTCC	2 cut(s)	324, 1301
Lsp1109I	GCAGC	4 cut(s)	170, 199, 382, 1380
LweI	GCATC	3 cut(s)	343, 660, 1450
MaeI	CTAG	3 cut(s)	654, 738, 1488
MaeII	ACGT	1 cut(s)	1360
MaeIII	GTNAC	3 cut(s)	446, 1380, 1444
MalI	GATC	8 cut(s)	24, 202, 246, 286, 920, 1046, 1333, 1456
MboI	GATC	8 cut(s)	22, 200, 244, 284, 918, 1044, 1331, 1454
MfeI	CAATTG	3 cut(s)	612, 894, 1422
MhlI	GDGCHC	1 cut(s)	127
MnlI	CCTC	8 cut(s)	375, 432, 691, 997, 1000, 1027, 1177, 1252
Mph1103I	ATGCAT	1 cut(s)	391
MroI	TCCGGA	1 cut(s)	247
MroXI	GAANNNNTTC	1 cut(s)	389
MseI	TTAA	5 cut(s)	558, 587, 986, 1292, 1401
MslI	CAYNNNNRTG	2 cut(s)	635, 1521
MspA1I	CMGCKG	2 cut(s)	161, 1437
MspCI	CTTAAG	1 cut(s)	1400
MspI	CCGG	2 cut(s)	248, 502
MspR9I	CCNGG	1 cut(s)	120
MunI	CAATTG	3 cut(s)	612, 894, 1422
Mva1269I	GAATGC	3 cut(s)	389, 391, 778
MvaI	CCWGG	1 cut(s)	120
MvnI	CGCG	1 cut(s)	110
MwoI	GCNNNNNNNGC	3 cut(s)	1160, 1241, 1263
NcoI	CCATGG	1 cut(s)	408
NdeI	CATATG	1 cut(s)	69
NdeII	GATC	8 cut(s)	22, 200, 244, 284, 918, 1044, 1331, 1454
NlaIII	CATG	7 cut(s)	245, 412, 661, 800, 1054, 1120, 1520
NlaIV	GGNNCC	4 cut(s)	116, 406, 754, 1142
NmuCI	GTSAC	2 cut(s)	446, 1444
NsiI	ATGCAT	1 cut(s)	391
NspI	RCATGY	1 cut(s)	1520
OliI	CACNNNNGTG	1 cut(s)	635
PagI	TCATGA	1 cut(s)	796
PasI	CCCWGGG	1 cut(s)	119
PctI	GAATGC	3 cut(s)	389, 391, 778
PdmI	GAANNNNTTC	1 cut(s)	389
PfeI	GAWTC	5 cut(s)	74, 429, 644, 967, 1072
PflFI	GACNNNGTC	1 cut(s)	1502
PflMI	CCANNNNNTGG	1 cut(s)	932
PkrI	GCNGC	5 cut(s)	160, 214, 372, 1370, 1439
PshAI	GACNNNNGTC	1 cut(s)	750
PsiI	TTATAA	1 cut(s)	888
Psp6I	CCWGG	1 cut(s)	118
PspEI	GGTNACC	1 cut(s)	1380
PspGI	CCWGG	1 cut(s)	118
PspN4I	GGNNCC	4 cut(s)	116, 406, 754, 1142
PspPI	GGNCC	4 cut(s)	499, 752, 826, 1265
PstI	CTGCAG	2 cut(s)	217, 1370
PsyI	GACNNNGTC	1 cut(s)	1502
PvuII	CAGCTG	1 cut(s)	161
RsaI	GTAC	3 cut(s)	91, 900, 1174
RsaNI	GTAC	3 cut(s)	90, 899, 1173
RseI	CAYNNNNRTG	2 cut(s)	635, 1521
SalI	GTCGAC	1 cut(s)	1512
SaqAI	TTAA	5 cut(s)	558, 587, 986, 1292, 1401
SatI	GCNGC	5 cut(s)	159, 213, 371, 1369, 1438
Sau3AI	GATC	8 cut(s)	22, 200, 244, 284, 918, 1044, 1331, 1454
Sau96I	GGNCC	4 cut(s)	499, 752, 826, 1265
ScrFI	CCNGG	1 cut(s)	120
SduI	GDGCHC	1 cut(s)	127
SfaNI	GCATC	3 cut(s)	343, 660, 1450
SfcI	CTRYAG	2 cut(s)	213, 1366
SinI	GGWCC	2 cut(s)	499, 752
SmiMI	CAYNNNNRTG	2 cut(s)	635, 1521
SmlI	CTYRAG	1 cut(s)	1400
SmoI	CTYRAG	1 cut(s)	1400
SsiI	CCGC	4 cut(s)	110, 1237, 1299, 1437
SspI	AATATT	1 cut(s)	930
SspMI	CTAG	3 cut(s)	654, 738, 1488
StyD4I	CCNGG	1 cut(s)	118
StyI	CCWWGG	3 cut(s)	177, 332, 408
TaaI	ACNGT	7 cut(s)	425, 523, 734, 853, 1344, 1511, 1542
TaiI	ACGT	1 cut(s)	1363
TaqI	TCGA	3 cut(s)	717, 1182, 1513
TatI	WGTACW	2 cut(s)	89, 898
TauI	GCSGC	1 cut(s)	1440
TfiI	GAWTC	5 cut(s)	74, 429, 644, 967, 1072
Tru1I	TTAA	5 cut(s)	558, 587, 986, 1292, 1401
Tru9I	TTAA	5 cut(s)	558, 587, 986, 1292, 1401
TscAI	CASTG	7 cut(s)	64, 214, 430, 528, 844, 943, 1309
TseFI	GTSAC	2 cut(s)	446, 1444
TseI	GCWGC	4 cut(s)	158, 212, 370, 1368
Tsp45I	GTSAC	2 cut(s)	446, 1444
TspDTI	ATGAA	7 cut(s)	17, 350, 360, 621, 785, 813, 957
TspRI	CASTG	7 cut(s)	64, 214, 430, 528, 844, 943, 1309
Tth111I	GACNNNGTC	1 cut(s)	1502
Van91I	CCANNNNNTGG	1 cut(s)	932
Vha464I	CTTAAG	1 cut(s)	1400
VpaK11BI	GGWCC	2 cut(s)	499, 752
XapI	RAATTY	4 cut(s)	576, 622, 944, 1288
XceI	RCATGY	1 cut(s)	1520
XcmI	CCANNNNNNNNNTGG	1 cut(s)	836
XmiI	GTMKAC	2 cut(s)	1506, 1513
XmnI	GAANNNNTTC	1 cut(s)	389
XspI	CTAG	3 cut(s)	654, 738, 1488
Zsp2I	ATGCAT	1 cut(s)	391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.