Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_multiflora | Rmu_sc0001556.1_g000011 Rmu_sc0004591.1_g000007 Rmu_sc0010224.1_g000004 |
| rosa_roxburghii | Rroxscaffold_2G00087670 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 91 |
| AcsI | RAATTY | 1 cut(s) | 191 |
| AgsI | TTSAA | 3 cut(s) | 77, 190, 334 |
| AluBI | AGCT | 3 cut(s) | 242, 287, 314 |
| AluI | AGCT | 3 cut(s) | 242, 287, 314 |
| AlwI | GGATC | 1 cut(s) | 91 |
| AoxI | GGCC | 2 cut(s) | 31, 55 |
| ApeKI | GCWGC | 1 cut(s) | 239 |
| ApoI | RAATTY | 1 cut(s) | 191 |
| BbvI | GCAGC | 1 cut(s) | 251 |
| BfaI | CTAG | 2 cut(s) | 35, 207 |
| BfmI | CTRYAG | 1 cut(s) | 309 |
| BisI | GCNGC | 1 cut(s) | 240 |
| BlsI | GCNGC | 1 cut(s) | 241 |
| BmrI | ACTGGG | 1 cut(s) | 123 |
| BmsI | GCATC | 1 cut(s) | 295 |
| BmuI | ACTGGG | 1 cut(s) | 123 |
| BpuEI | CTTGAG | 1 cut(s) | 29 |
| Bse1I | ACTGG | 1 cut(s) | 118 |
| BseGI | GGATG | 2 cut(s) | 156, 310 |
| BseNI | ACTGG | 1 cut(s) | 118 |
| BseXI | GCAGC | 1 cut(s) | 251 |
| BshFI | GGCC | 2 cut(s) | 33, 57 |
| BslFI | GGGAC | 1 cut(s) | 131 |
| BsmFI | GGGAC | 1 cut(s) | 131 |
| BsnI | GGCC | 2 cut(s) | 33, 57 |
| Bsp143I | GATC | 1 cut(s) | 96 |
| BspANI | GGCC | 2 cut(s) | 33, 57 |
| BspPI | GGATC | 1 cut(s) | 91 |
| BsrI | ACTGG | 1 cut(s) | 118 |
| BssMI | GATC | 1 cut(s) | 96 |
| Bst4CI | ACNGT | 3 cut(s) | 86, 122, 165 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 245 |
| BstF5I | GGATG | 2 cut(s) | 156, 310 |
| BstKTI | GATC | 1 cut(s) | 99 |
| BstMBI | GATC | 1 cut(s) | 96 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 245 |
| BstSFI | CTRYAG | 1 cut(s) | 309 |
| BstV1I | GCAGC | 1 cut(s) | 251 |
| BsuRI | GGCC | 2 cut(s) | 33, 57 |
| BtsCI | GGATG | 2 cut(s) | 156, 310 |
| BtsIMutI | CAGTG | 1 cut(s) | 170 |
| CviJI | RGCY | 5 cut(s) | 33, 57, 242, 287, 314 |
| CviKI_1 | RGCY | 5 cut(s) | 33, 57, 242, 287, 314 |
| DpnI | GATC | 1 cut(s) | 98 |
| DpnII | GATC | 1 cut(s) | 96 |
| Eco147I | AGGCCT | 2 cut(s) | 33, 57 |
| FaiI | YATR | 7 cut(s) | 70, 183, 231, 252, 272, 274, 311 |
| FaqI | GGGAC | 1 cut(s) | 131 |
| Fnu4HI | GCNGC | 1 cut(s) | 240 |
| FokI | GGATG | 2 cut(s) | 143, 317 |
| Fsp4HI | GCNGC | 1 cut(s) | 240 |
| FspBI | CTAG | 2 cut(s) | 35, 207 |
| GluI | GCNGC | 1 cut(s) | 240 |
| HaeIII | GGCC | 2 cut(s) | 33, 57 |
| HinfI | GANTC | 1 cut(s) | 254 |
| Hpy188III | TCNNGA | 2 cut(s) | 62, 302 |
| HpyAV | CCTTC | 2 cut(s) | 23, 68 |
| HpyCH4III | ACNGT | 3 cut(s) | 86, 122, 165 |
| HpyCH4IV | ACGT | 1 cut(s) | 233 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 229 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 245 |
| HpySE526I | ACGT | 1 cut(s) | 233 |
| Kzo9I | GATC | 1 cut(s) | 96 |
| LmnI | GCTCC | 3 cut(s) | 92, 208, 292 |
| LpnPI | CCDG | 4 cut(s) | 99, 158, 287, 303 |
| Lsp1109I | GCAGC | 1 cut(s) | 251 |
| LweI | GCATC | 1 cut(s) | 295 |
| MaeI | CTAG | 2 cut(s) | 35, 207 |
| MaeII | ACGT | 1 cut(s) | 233 |
| MaeIII | GTNAC | 2 cut(s) | 80, 122 |
| MalI | GATC | 1 cut(s) | 98 |
| MboI | GATC | 1 cut(s) | 96 |
| MluCI | AATT | 5 cut(s) | 21, 184, 191, 217, 334 |
| MmeI | TCCRAC | 1 cut(s) | 184 |
| MnlI | CCTC | 2 cut(s) | 47, 53 |
| MseI | TTAA | 1 cut(s) | 128 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 245 |
| NdeII | GATC | 1 cut(s) | 96 |
| NmuCI | GTSAC | 2 cut(s) | 80, 122 |
| PceI | AGGCCT | 2 cut(s) | 33, 57 |
| PfeI | GAWTC | 1 cut(s) | 254 |
| PkrI | GCNGC | 1 cut(s) | 241 |
| SaqAI | TTAA | 1 cut(s) | 128 |
| SatI | GCNGC | 1 cut(s) | 240 |
| Sau3AI | GATC | 1 cut(s) | 96 |
| SetI | ASST | 5 cut(s) | 147, 236, 244, 289, 316 |
| SfaNI | GCATC | 1 cut(s) | 295 |
| SfcI | CTRYAG | 1 cut(s) | 309 |
| SmlI | CTYRAG | 1 cut(s) | 44 |
| SmoI | CTYRAG | 1 cut(s) | 44 |
| Sse9I | AATT | 5 cut(s) | 21, 184, 191, 217, 334 |
| SseBI | AGGCCT | 2 cut(s) | 33, 57 |
| SspI | AATATT | 1 cut(s) | 298 |
| SspMI | CTAG | 2 cut(s) | 35, 207 |
| StuI | AGGCCT | 2 cut(s) | 33, 57 |
| TaaI | ACNGT | 3 cut(s) | 86, 122, 165 |
| TaiI | ACGT | 1 cut(s) | 236 |
| TaqI | TCGA | 2 cut(s) | 153, 328 |
| TasI | AATT | 5 cut(s) | 21, 184, 191, 217, 334 |
| TfiI | GAWTC | 1 cut(s) | 254 |
| Tru1I | TTAA | 1 cut(s) | 128 |
| Tru9I | TTAA | 1 cut(s) | 128 |
| TscAI | CASTG | 1 cut(s) | 170 |
| TseFI | GTSAC | 2 cut(s) | 80, 122 |
| TseI | GCWGC | 1 cut(s) | 239 |
| Tsp45I | GTSAC | 2 cut(s) | 80, 122 |
| TspDTI | ATGAA | 2 cut(s) | 147, 267 |
| TspRI | CASTG | 1 cut(s) | 170 |
| XapI | RAATTY | 1 cut(s) | 191 |
| XspI | CTAG | 2 cut(s) | 35, 207 |