Ribonuclease H protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g06577 |
| rosa_multiflora | Rmu_co8059702.1_g000001 Rmu_sc0002148.1_g000028 |
| rosa_rugosa | Rorug02G0525800 Rorug05G0340700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 136 |
| Acc36I | ACCTGC | 1 cut(s) | 136 |
| AciI | CCGC | 1 cut(s) | 103 |
| AclWI | GGATC | 2 cut(s) | 168, 228 |
| AfaI | GTAC | 1 cut(s) | 81 |
| AgsI | TTSAA | 1 cut(s) | 55 |
| AluBI | AGCT | 1 cut(s) | 170 |
| AluI | AGCT | 1 cut(s) | 170 |
| Alw26I | GTCTC | 3 cut(s) | 9, 35, 59 |
| AlwI | GGATC | 2 cut(s) | 168, 228 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 34, 66 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 72, 104 |
| BbsI | GAAGAC | 1 cut(s) | 80 |
| BccI | CCATC | 3 cut(s) | 17, 55, 151 |
| BcoDI | GTCTC | 3 cut(s) | 9, 35, 59 |
| BfaI | CTAG | 2 cut(s) | 5, 140 |
| BfuAI | ACCTGC | 1 cut(s) | 136 |
| BpiI | GAAGAC | 1 cut(s) | 80 |
| BsaWI | WCCGGW | 1 cut(s) | 37 |
| Bse1I | ACTGG | 1 cut(s) | 237 |
| BseGI | GGATG | 1 cut(s) | 162 |
| BseNI | ACTGG | 1 cut(s) | 237 |
| BsiSI | CCGG | 2 cut(s) | 38, 226 |
| BsmAI | GTCTC | 3 cut(s) | 9, 35, 59 |
| BsmBI | CGTCTC | 1 cut(s) | 35 |
| Bsp143I | GATC | 2 cut(s) | 160, 233 |
| BspACI | CCGC | 1 cut(s) | 103 |
| BspMI | ACCTGC | 1 cut(s) | 136 |
| BspPI | GGATC | 2 cut(s) | 168, 228 |
| BspQI | GCTCTTC | 1 cut(s) | 183 |
| BsrI | ACTGG | 1 cut(s) | 237 |
| BssMI | GATC | 2 cut(s) | 160, 233 |
| Bst4CI | ACNGT | 1 cut(s) | 46 |
| Bst6I | CTCTTC | 1 cut(s) | 183 |
| BstF5I | GGATG | 1 cut(s) | 162 |
| BstKTI | GATC | 2 cut(s) | 163, 236 |
| BstMAI | GTCTC | 3 cut(s) | 9, 35, 59 |
| BstMBI | GATC | 2 cut(s) | 160, 233 |
| BstV2I | GAAGAC | 1 cut(s) | 80 |
| BstX2I | RGATCY | 1 cut(s) | 160 |
| BstYI | RGATCY | 1 cut(s) | 160 |
| BtsCI | GGATG | 1 cut(s) | 162 |
| BtsIMutI | CAGTG | 1 cut(s) | 244 |
| BveI | ACCTGC | 1 cut(s) | 136 |
| CseI | GACGC | 1 cut(s) | 145 |
| Csp6I | GTAC | 1 cut(s) | 80 |
| CviAII | CATG | 2 cut(s) | 69, 124 |
| CviJI | RGCY | 3 cut(s) | 28, 50, 170 |
| CviKI_1 | RGCY | 3 cut(s) | 28, 50, 170 |
| CviQI | GTAC | 1 cut(s) | 80 |
| DpnI | GATC | 2 cut(s) | 162, 235 |
| DpnII | GATC | 2 cut(s) | 160, 233 |
| Eam1104I | CTCTTC | 1 cut(s) | 183 |
| EarI | CTCTTC | 1 cut(s) | 183 |
| Esp3I | CGTCTC | 1 cut(s) | 35 |
| FaeI | CATG | 2 cut(s) | 72, 127 |
| FaiI | YATR | 4 cut(s) | 21, 59, 70, 125 |
| FatI | CATG | 2 cut(s) | 68, 123 |
| FokI | GGATG | 1 cut(s) | 169 |
| FspBI | CTAG | 2 cut(s) | 5, 140 |
| HapII | CCGG | 2 cut(s) | 38, 226 |
| HgaI | GACGC | 1 cut(s) | 145 |
| Hin1II | CATG | 2 cut(s) | 72, 127 |
| HinfI | GANTC | 1 cut(s) | 229 |
| HpaII | CCGG | 2 cut(s) | 38, 226 |
| Hpy166II | GTNNAC | 1 cut(s) | 35 |
| Hpy188I | TCNGA | 2 cut(s) | 165, 174 |
| Hpy8I | GTNNAC | 1 cut(s) | 35 |
| Hpy99I | CGWCG | 2 cut(s) | 139, 225 |
| HpyAV | CCTTC | 1 cut(s) | 175 |
| HpyCH4III | ACNGT | 1 cut(s) | 46 |
| Hsp92II | CATG | 2 cut(s) | 72, 127 |
| Kzo9I | GATC | 2 cut(s) | 160, 233 |
| LguI | GCTCTTC | 1 cut(s) | 183 |
| LpnPI | CCDG | 4 cut(s) | 51, 113, 131, 239 |
| MaeI | CTAG | 2 cut(s) | 5, 140 |
| MalI | GATC | 2 cut(s) | 162, 235 |
| MboI | GATC | 2 cut(s) | 160, 233 |
| MboII | GAAGA | 3 cut(s) | 80, 197, 200 |
| MflI | RGATCY | 1 cut(s) | 160 |
| MluCI | AATT | 1 cut(s) | 244 |
| MnlI | CCTC | 3 cut(s) | 77, 102, 189 |
| MseI | TTAA | 1 cut(s) | 201 |
| MspI | CCGG | 2 cut(s) | 38, 226 |
| NdeII | GATC | 2 cut(s) | 160, 233 |
| NlaIII | CATG | 2 cut(s) | 72, 127 |
| PaqCI | CACCTGC | 1 cut(s) | 136 |
| PciSI | GCTCTTC | 1 cut(s) | 183 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 229 |
| PfeI | GAWTC | 1 cut(s) | 229 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 201, 233 |
| PsuI | RGATCY | 1 cut(s) | 160 |
| RsaI | GTAC | 1 cut(s) | 81 |
| RsaNI | GTAC | 1 cut(s) | 80 |
| SapI | GCTCTTC | 1 cut(s) | 183 |
| SaqAI | TTAA | 1 cut(s) | 201 |
| Sau3AI | GATC | 2 cut(s) | 160, 233 |
| SetI | ASST | 3 cut(s) | 88, 150, 172 |
| Sse9I | AATT | 1 cut(s) | 244 |
| SsiI | CCGC | 1 cut(s) | 103 |
| SspMI | CTAG | 2 cut(s) | 5, 140 |
| TaaI | ACNGT | 1 cut(s) | 46 |
| TaqI | TCGA | 1 cut(s) | 232 |
| TasI | AATT | 1 cut(s) | 244 |
| TfiI | GAWTC | 1 cut(s) | 229 |
| Tru1I | TTAA | 1 cut(s) | 201 |
| Tru9I | TTAA | 1 cut(s) | 201 |
| TscAI | CASTG | 1 cut(s) | 244 |
| TspRI | CASTG | 1 cut(s) | 244 |
| XspI | CTAG | 2 cut(s) | 5, 140 |