Rorug05G0340700

RING/Ubox like zinc-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0001311
Physical Location & Seq
Reverse (-)
41532776 .. 41541101
8326 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0340700.1

Sequence Viewer

Length: 2892 bp
ATGGGCGTTTTGCTCAAAGAAGCGCTTAAGAGGCTGTGCAGTGCCAATCAGTGGGCTTATGCCGTCTTCTGGAAGATCGGCTGCCAAAACCCTAATTTGTTAATTTGGGAAGAATCTCATTATGAACCATCACTATCGTCTCGACATACAAGCATTGCTGGAACTGAAAGTGGTGATTCACCATTTGGAGAGTGGGAAGGATGTTGGGTTTCCTCTAAAGTGTGTTCATCTTCTCATGGCATTCAACCAGAGGAAAGAGTCTCTGCACTTCTTAACAAAATGTTGATGGATAAACCATTTACTATAGTGGGCGACGGGATCGTTGGACGAGCTGCATTTACTGGACATCATCAATGGATTCTTTCAAGCAATTACTCTAAATATGCCCATCCACCAGAGGTTCTAAATGAGATGCACCACCAATTTTCAGCTGGAATGCAGACAGTTGCAGTTATTCCTGTTCTCCCTCACGGCGTTGTTCAGCTTGGTTCTAGTTTGGCTATTATGGAGAATATAGGATTCATTAATGACGTCAAGAGTTTGATCCTGCAACTTGGATGTGTTCCTGGTGCTCTTTTATCTGAAAATTATGAGACAAAAAGTTCAGATGAGAAAGTTGGGGTACCTTATACTATTGGAATGCTGACAACTGTTCATCCAGGTGGACATACAACAAGTTCTACTCATACGACAAGTAGCAACAATCATCAAAACCACCCATCTCAGGCTTCCAGGCTTGTTGGTCAACCTTCTCATTCTCTTTATGAAGAGACTCAGAATATTTCTCAAGCTACTGCTTCAACATTTCAAACTCCTAACCTTACCCAAATTCTGCCTAAAATTCATGATGACCGTCGACAACCAGTGATGAAGCCAAAGTTTCCTCTTGGAGGCCAACTAAGGGATGGAGTTGGGGTAGCTGAAGTGATCTCCTCCAATTCTGATGCATGGTTGAACCACCTTGCTCCTTCTAATTTGAGGTGTGGACTGAAGTACCCATGTGGTTCTGTTCAATCAGCTGCAAGTCAGGGAAGCTTAGAGTTGATGGAACATCAGATCTTGTCTGGTGGTAGCATGAGGCCTACTTTTAGTAGCAAAATTAGTGCATCAAACGGTTTCATGACTGAGCCTAGAACAGGTGGAATTCTAACCCTTGATCAGAGAAAAAGTTTGATAACCACTCCAGCATTGCTTGGGGGAAGTCAAACACATGGTGGATCGAGTACTCATTCGAGGCCAACTTCAGCTACTTGTTCTCATATAGAGACACATGGGGCAGCTGACATTAATCTCTCTGGAACATATCTGTCTGGGGTTGAATTTCAAAAGGCTGATTCATTCAAAACAGACAGGATTTCTTTATCTAGTTTGGCAGATCAATCAGCTTCTCAGGATATACTTTCAAAAGGCTCTGACCAGAGGCAGTTTTCCACGGAAGTGAAGCTTACTCAGAGTGATTTGCCTCCAGTGGAGCAAAGGACAGATAATAAATTGTTTCAAGCCCTTAACATCCCATTGACTCATCCATGTGAACATATATCTTCGAGTGATCACATACCTCAGATTCATGATGGTCTTGATAAAATTTGTACCCCAGGATCTGTAAATGCTACAAATGATGATATGTGTACTCAAACAGGGGATGACTTGTTTGATGTTTTGGGTGTGGATTTCAAAAATAAGTTGCTTAATGGTAATTGGAATAGTTTGCTGGCTGATGAACCAGGTTCAAACAAAAGAGATCTTGCTGAGACTACTTTGGCATTCACAAATGTGAAGGATCTGGTTTCTGATTATTATTCAGCAAGTGAAGGCATATCAAACAGTAGTATCTTCTCTGGGGCAGATGCTGACCATCTTTTAGATGCTGTGGTCTCGAAGGCGCACTCTACTATCAAGCAGAGCTCTGATGATAATGTGTCTTGTAAAACAACATTGACAAAAATCAGTACCTCTTCTGTCCCTAGTGGTTCTCTCACTTATGGACAGGTTAGCGTGTCTAATCAAGTGCCGGGGGAGACATTTGACCTTCCTAAGGATCTTGGAAAAGCAGGCTTAGTAGAAATCAGTTCTTTCCTATCTGGGTGTAGCAGGGATGATGCAGGAAACTGTTCCCAGACTACCTCCATATATGGATCTGAAGTTAGTTCTTGGGTTGAACAGGGAAATAATTCAAAGCATGAGAGTAGTGTTTCAACTGCATATTCTAAGAAGCCTGATCTAATGGGGAAATCAAATCGCAAAAGGCTGAAACCTGGCGAGAATCCTAGACCAAGACCTAAAGATCGCCAGATGATCCAAGATCGTGTGAAGGAGTTGCGTGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTGCTTGAACGTACCATCAAGCATATGCTTTTCTTGCAAAGTGTCACTAAGCATGCTGACAAGCTAAAACAAACAGGAAGAGCCAAGATTATTGGCAAAGAAGGTGGACTGCATCTAAAAGATAACTATGATGGAAGGGCAACATGGGCTTTTGATGTTGGGTCACAATCTATGGTCTGCCCCATCATAGTTGAGGATCTAGATTCACCTCGCCAGATGCTTGTGGAGATGCTTTGTGAAGAACAGGGTTTCTTTTTAGAAATTGCTGATATAATTAGAGGTTTGGGTTTGACCATCTTGAAAGGGGTGATGGAAACTCGGAATGATAAGATATGGGCACGCTTTGCTGTAGAGGCAAATAGGGATGTAACAAGGATGGAAATATTTATGTCCCTTGTTCACCTTTTGGAGCAAACTGTAAAAGGCACAGCGCCATCAGTCAATGCTATCAAGAACAACAGTATGGTCCACCATTCTTTCGCCCAAGCAGCCCCAATACCTGCAACTGGTAGGCCCAGTGGTTTTCAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000075 GO:0000077 GO:0000278 GO:0000288 GO:0000289 GO:0000956 GO:0002682 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006464 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006977 GO:0007049 GO:0007093 GO:0007154 GO:0007165 GO:0007346 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010468 GO:0010564 GO:0010605 GO:0010629 GO:0010948 GO:0016070 GO:0016071 GO:0016567 GO:0016740 GO:0019222 GO:0019439 GO:0019538 GO:0019787 GO:0019941 GO:0022402 GO:0023052 GO:0030163 GO:0030330 GO:0031570 GO:0031571 GO:0032446 GO:0033554 GO:0034641 GO:0034655 GO:0035556 GO:0036211 GO:0042770 GO:0043170 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044270 GO:0044424 GO:0044444 GO:0044464 GO:0044773 GO:0044774 GO:0044783 GO:0044819 GO:0045595 GO:0045637 GO:0045652 GO:0045786 GO:0045787 GO:0045930 GO:0046483 GO:0046700 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051239 GO:0051603 GO:0051716 GO:0051726 GO:0051865 GO:0060255 GO:0065007 GO:0070647 GO:0071156 GO:0071158 GO:0071704 GO:0072331 GO:0072395 GO:0072401 GO:0072413 GO:0072422 GO:0072431 GO:0090068 GO:0090304 GO:0140096 GO:1901360 GO:1901361 GO:1901564 GO:1901565 GO:1901575 GO:1901987 GO:1901988 GO:1901990 GO:1901991 GO:1902400 GO:1902402 GO:1902403 GO:1902806 GO:1902807 GO:1903047 GO:1903706 GO:2000026 GO:2000045 GO:2000134
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RRM_1 zf-RING_4

Protein Analysis

963

Amino Acids

104.45

Weight (kDa)

6.21

Isoelectric Point (pI)

37.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
bHLH-MYC_N PF14215 5 - 181 2.3e-33 bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW PF23176 757 - 816 1.7e-34 Transcription factor LHW bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 534
Acc36I ACCTGC 1 cut(s) 2869
Acc65I GGTACC 1 cut(s) 622
AccB1I GGYRCC 1 cut(s) 622
AccB7I CCANNNNNTGG 1 cut(s) 51
AccI GTMKAC 1 cut(s) 856
AclWI GGATC 9 cut(s) 326, 538, 1225, 1606, 1788, 2046, 2143, 2290, 2565
AcsI RAATTY 5 cut(s) 828, 840, 1143, 1319, 1584
AcuI CTGAAG 4 cut(s) 942, 1010, 1227, 2160
AcyI GRCGYC 1 cut(s) 531
AdeI CACNNNGTG 1 cut(s) 1214
AfaI GTAC 7 cut(s) 624, 995, 1225, 1591, 1630, 1951, 2374
AfeI AGCGCT 1 cut(s) 24
AfiI CCNNNNNNNGG 8 cut(s) 51, 69, 724, 890, 901, 1136, 2035, 2867
AflII CTTAAG 1 cut(s) 26
AjnI CCWGG 6 cut(s) 565, 658, 731, 1594, 1723, 2254
AleI CACNNNNGTG 2 cut(s) 1436, 1772
Alw21I GWGCWC 2 cut(s) 574, 1907
Alw26I GTCTC 8 cut(s) 144, 265, 587, 764, 1259, 1745, 1879, 2012
AlwI GGATC 9 cut(s) 326, 538, 1225, 1606, 1788, 2046, 2143, 2290, 2565
AlwNI CAGNNNCTG 2 cut(s) 1601, 1850
Aor51HI AGCGCT 1 cut(s) 24
AoxI GGCC 4 cut(s) 892, 1079, 1235, 2873
ApeKI GCWGC 5 cut(s) 81, 332, 1019, 1277, 2849
ApoI RAATTY 5 cut(s) 828, 840, 1143, 1319, 1584
AseI ATTAAT 2 cut(s) 525, 1287
Asp700I GAANNNNTTC 2 cut(s) 2110, 2170
Asp718I GGTACC 1 cut(s) 622
AspLEI GCGC 3 cut(s) 25, 1885, 2794
AspS9I GGNCC 2 cut(s) 2827, 2874
AsuC2I CCSGG 1 cut(s) 2013
AsuHPI GGTGA 5 cut(s) 171, 185, 2559, 2680, 2753
AvaII GGWCC 1 cut(s) 2827
AxyI CCTNAGG 1 cut(s) 2034
BaeGI GKGCMC 1 cut(s) 2701
BaeI ACNNNNGTAYC 4 cut(s) 977, 1010, 1813, 1846
BanI GGYRCC 1 cut(s) 622
BanII GRGCYC 1 cut(s) 1907
BbsI GAAGAC 1 cut(s) 58
Bbv12I GWGCWC 2 cut(s) 574, 1907
BbvI GCAGC 5 cut(s) 68, 319, 1006, 1289, 2861
BceAI ACGGC 2 cut(s) 47, 487
BciT130I CCWGG 6 cut(s) 567, 660, 733, 1596, 1725, 2256
BclI TGATCA 2 cut(s) 1156, 1549
BcnI CCSGG 1 cut(s) 2013
BcoDI GTCTC 8 cut(s) 144, 265, 587, 764, 1259, 1745, 1879, 2012
BfaI CTAG 6 cut(s) 492, 1131, 1365, 1965, 2268, 2561
BfmI CTRYAG 2 cut(s) 303, 2709
BfoI RGCGCY 2 cut(s) 26, 2795
BfrI CTTAAG 1 cut(s) 26
BfuAI ACCTGC 1 cut(s) 2869
BglII AGATCT 2 cut(s) 1056, 1741
BisI GCNGC 5 cut(s) 82, 333, 1020, 1278, 2850
BlsI GCNGC 5 cut(s) 83, 334, 1021, 1279, 2851
BmcAI AGTACT 1 cut(s) 1225
Bme1390I CCNGG 7 cut(s) 567, 660, 733, 1596, 1725, 2013, 2256
Bme18I GGWCC 1 cut(s) 2827
BmgT120I GGNCC 2 cut(s) 2827, 2874
BmiI GGNNCC 1 cut(s) 624
BmrFI CCNGG 7 cut(s) 567, 660, 733, 1596, 1725, 2013, 2256
BmrI ACTGGG 1 cut(s) 2871
BmuI ACTGGG 1 cut(s) 2871
BpiI GAAGAC 1 cut(s) 58
BpmI CTGGAG 2 cut(s) 1167, 1449
BpuEI CTTGAG 1 cut(s) 771
BpuMI CCSGG 1 cut(s) 2013
BsaHI GRCGYC 1 cut(s) 531
BsaI GGTCTC 1 cut(s) 1879
BsaJI CCNNGG 3 cut(s) 1431, 1594, 2012
BsaXI ACNNNNNCTCC 2 cut(s) 900, 930
Bsc4I CCNNNNNNNGG 8 cut(s) 51, 69, 724, 890, 901, 1136, 2035, 2867
Bse1I ACTGG 5 cut(s) 346, 863, 1466, 2872, 2877
Bse21I CCTNAGG 1 cut(s) 2034
Bse3DI GCAATG 2 cut(s) 153, 1187
BseBI CCWGG 6 cut(s) 567, 660, 733, 1596, 1725, 2256
BseDI CCNNGG 3 cut(s) 1431, 1594, 2012
BseLI CCNNNNNNNGG 8 cut(s) 51, 69, 724, 890, 901, 1136, 2035, 2867
BseMI GCAATG 2 cut(s) 153, 1187
BseMII CTCAG 7 cut(s) 737, 788, 1116, 1403, 1463, 1574, 1740
BseNI ACTGG 5 cut(s) 346, 863, 1466, 2872, 2877
BseRI GAGGAG 1 cut(s) 922
BseSI GKGCMC 1 cut(s) 2701
BseXI GCAGC 5 cut(s) 68, 319, 1006, 1289, 2861
BsgI GTGCAG 2 cut(s) 58, 249
BshFI GGCC 4 cut(s) 894, 1081, 1237, 2875
BshNI GGYRCC 1 cut(s) 622
BsiHKAI GWGCWC 2 cut(s) 574, 1907
BsiSI CCGG 1 cut(s) 2012
BslFI GGGAC 2 cut(s) 1946, 2737
BslI CCNNNNNNNGG 8 cut(s) 51, 69, 724, 890, 901, 1136, 2035, 2867
BsmAI GTCTC 8 cut(s) 144, 265, 587, 764, 1259, 1745, 1879, 2012
BsmBI CGTCTC 1 cut(s) 144
BsmFI GGGAC 2 cut(s) 1946, 2737
BsmI GAATGC 4 cut(s) 240, 441, 645, 1763
BsnI GGCC 4 cut(s) 894, 1081, 1237, 2875
Bso31I GGTCTC 1 cut(s) 1879
Bsp1286I GDGCHC 3 cut(s) 574, 1907, 2701
BspANI GGCC 4 cut(s) 894, 1081, 1237, 2875
BspCNI CTCAG 7 cut(s) 736, 787, 1117, 1402, 1462, 1573, 1741
BspHI TCATGA 3 cut(s) 844, 1119, 1567
BspLI GGNNCC 1 cut(s) 624
BspMI ACCTGC 1 cut(s) 2869
BspPI GGATC 9 cut(s) 326, 538, 1225, 1606, 1788, 2046, 2143, 2290, 2565
BspQI GCTCTTC 1 cut(s) 2434
BspT107I GGYRCC 1 cut(s) 622
BspTI CTTAAG 1 cut(s) 26
BspTNI GGTCTC 1 cut(s) 1879
BsrDI GCAATG 2 cut(s) 153, 1187
BsrI ACTGG 5 cut(s) 346, 863, 1466, 2872, 2877
BssECI CCNNGG 3 cut(s) 1431, 1594, 2012
BssNI GRCGYC 1 cut(s) 531
Bst2UI CCWGG 6 cut(s) 567, 660, 733, 1596, 1725, 2256
Bst4CI ACNGT 8 cut(s) 445, 652, 854, 1115, 1826, 2111, 2779, 2822
Bst6I CTCTTC 3 cut(s) 762, 1960, 2434
BstACI GRCGYC 1 cut(s) 531
BstAFI CTTAAG 1 cut(s) 26
BstAPI GCANNNNNTGC 1 cut(s) 2705
BstC8I GCNNGC 4 cut(s) 1713, 2053, 2415, 2701
BstDSI CCRYGG 1 cut(s) 1431
BstENI CCTNNNNNAGG 3 cut(s) 888, 1134, 2033
BstH2I RGCGCY 2 cut(s) 26, 2795
BstHHI GCGC 3 cut(s) 25, 1885, 2794
BstMAI GTCTC 8 cut(s) 144, 265, 587, 764, 1259, 1745, 1879, 2012
BstMWI GCNNNNNNNGC 6 cut(s) 31, 2395, 2507, 2705, 2714, 2849
BstNI CCWGG 6 cut(s) 567, 660, 733, 1596, 1725, 2256
BstNSI RCATGY 1 cut(s) 2417
BstSCI CCNGG 7 cut(s) 565, 658, 731, 1594, 1723, 2011, 2254
BstSFI CTRYAG 2 cut(s) 303, 2709
BstSLI GKGCMC 1 cut(s) 2701
BstV1I GCAGC 5 cut(s) 68, 319, 1006, 1289, 2861
BstV2I GAAGAC 1 cut(s) 58
BstX2I RGATCY 7 cut(s) 1056, 1598, 1741, 1780, 2038, 2135, 2557
BstYI RGATCY 7 cut(s) 1056, 1598, 1741, 1780, 2038, 2135, 2557
Bsu36I CCTNAGG 1 cut(s) 2034
BsuRI GGCC 4 cut(s) 894, 1081, 1237, 2875
BtgI CCRYGG 1 cut(s) 1431
BtsI GCAGTG 2 cut(s) 46, 2360
BtsIMutI CAGTG 6 cut(s) 46, 56, 870, 1473, 2360, 2884
BveI ACCTGC 1 cut(s) 2869
Cac8I GCNNGC 4 cut(s) 1713, 2053, 2415, 2701
CaiI CAGNNNCTG 2 cut(s) 1601, 1850
CciI TCATGA 3 cut(s) 844, 1119, 1567
CfoI GCGC 3 cut(s) 25, 1885, 2794
Cfr13I GGNCC 2 cut(s) 2827, 2874
CsiI ACCWGGT 1 cut(s) 1723
Csp6I GTAC 7 cut(s) 623, 994, 1224, 1590, 1629, 1950, 2373
CspCI CAANNNNNGTGG 2 cut(s) 2446, 2481
CviQI GTAC 7 cut(s) 623, 994, 1224, 1590, 1629, 1950, 2373
DraIII CACNNNGTG 1 cut(s) 1214
Eam1104I CTCTTC 3 cut(s) 762, 1960, 2434
EarI CTCTTC 3 cut(s) 762, 1960, 2434
Ecl136II GAGCTC 1 cut(s) 1905
Eco147I AGGCCT 1 cut(s) 1081
Eco24I GRGCYC 1 cut(s) 1907
Eco31I GGTCTC 1 cut(s) 1879
Eco47I GGWCC 1 cut(s) 2827
Eco47III AGCGCT 1 cut(s) 24
Eco53kI GAGCTC 1 cut(s) 1905
Eco57I CTGAAG 4 cut(s) 942, 1010, 1227, 2160
Eco81I CCTNAGG 1 cut(s) 2034
EcoICRI GAGCTC 1 cut(s) 1905
EcoNI CCTNNNNNAGG 3 cut(s) 888, 1134, 2033
EcoRI GAATTC 1 cut(s) 1143
EcoRII CCWGG 6 cut(s) 565, 658, 731, 1594, 1723, 2254
EcoT22I ATGCAT 1 cut(s) 949
EcoT38I GRGCYC 1 cut(s) 1907
Esp3I CGTCTC 1 cut(s) 144
FalI AAGNNNNNCTT 4 cut(s) 9, 41, 1428, 1460
FaqI GGGAC 2 cut(s) 1946, 2737
FauNDI CATATG 1 cut(s) 2385
FbaI TGATCA 2 cut(s) 1156, 1549
FblI GTMKAC 1 cut(s) 856
Fnu4HI GCNGC 5 cut(s) 82, 333, 1020, 1278, 2850
FriOI GRGCYC 1 cut(s) 1907
Fsp4HI GCNGC 5 cut(s) 82, 333, 1020, 1278, 2850
FspBI CTAG 6 cut(s) 492, 1131, 1365, 1965, 2268, 2561
GlaI GCGC 3 cut(s) 24, 1884, 2793
GluI GCNGC 5 cut(s) 82, 333, 1020, 1278, 2850
GsuI CTGGAG 2 cut(s) 1167, 1449
HaeII RGCGCY 2 cut(s) 26, 2795
HaeIII GGCC 4 cut(s) 894, 1081, 1237, 2875
HapII CCGG 1 cut(s) 2012
HhaI GCGC 3 cut(s) 25, 1885, 2794
Hin1I GRCGYC 1 cut(s) 531
Hin6I GCGC 3 cut(s) 23, 1883, 2792
HinP1I GCGC 3 cut(s) 23, 1883, 2792
HincII GTYRAC 2 cut(s) 746, 857
HindII GTYRAC 2 cut(s) 746, 857
HindIII AAGCTT 2 cut(s) 1033, 1442
HpaII CCGG 1 cut(s) 2012
HphI GGTGA 5 cut(s) 171, 185, 2559, 2680, 2753
Hpy166II GTNNAC 9 cut(s) 665, 746, 857, 986, 1532, 1629, 2468, 2761, 2830
Hpy8I GTNNAC 9 cut(s) 665, 746, 857, 986, 1532, 1629, 2468, 2761, 2830
Hpy99I CGWCG 2 cut(s) 317, 858
HpyCH4III ACNGT 8 cut(s) 445, 652, 854, 1115, 1826, 2111, 2779, 2822
HpyCH4IV ACGT 2 cut(s) 531, 2371
HpyF10VI GCNNNNNNNGC 6 cut(s) 31, 2395, 2507, 2705, 2714, 2849
HpySE526I ACGT 2 cut(s) 531, 2371
Hsp92I GRCGYC 1 cut(s) 531
HspAI GCGC 3 cut(s) 23, 1883, 2792
KpnI GGTACC 1 cut(s) 626
Ksp22I TGATCA 2 cut(s) 1156, 1549
LguI GCTCTTC 1 cut(s) 2434
LmnI GCTCC 4 cut(s) 970, 1471, 2339, 2770
Lsp1109I GCAGC 5 cut(s) 68, 319, 1006, 1289, 2861
MabI ACCWGGT 1 cut(s) 1723
MaeI CTAG 6 cut(s) 492, 1131, 1365, 1965, 2268, 2561
MaeII ACGT 2 cut(s) 531, 2371
MaeIII GTNAC 3 cut(s) 2404, 2523, 2728
MflI RGATCY 7 cut(s) 1056, 1598, 1741, 1780, 2038, 2135, 2557
MhlI GDGCHC 3 cut(s) 574, 1907, 2701
MlyI GAGTC 3 cut(s) 267, 766, 1513
MmeI TCCRAC 1 cut(s) 304
Mph1103I ATGCAT 1 cut(s) 949
MroXI GAANNNNTTC 2 cut(s) 2110, 2170
MseI TTAA 7 cut(s) 27, 101, 273, 525, 1287, 1506, 1689
MslI CAYNNNNRTG 4 cut(s) 660, 1436, 1527, 1772
MspA1I CMGCKG 3 cut(s) 431, 1019, 1280
MspCI CTTAAG 1 cut(s) 26
MspI CCGG 1 cut(s) 2012
MspR9I CCNGG 7 cut(s) 567, 660, 733, 1596, 1725, 2013, 2256
Mva1269I GAATGC 4 cut(s) 240, 441, 645, 1763
MvaI CCWGG 6 cut(s) 567, 660, 733, 1596, 1725, 2256
MwoI GCNNNNNNNGC 6 cut(s) 31, 2395, 2507, 2705, 2714, 2849
NciI CCSGG 1 cut(s) 2013
NdeI CATATG 1 cut(s) 2385
NlaIV GGNNCC 1 cut(s) 624
NmuCI GTSAC 2 cut(s) 2404, 2523
NsiI ATGCAT 1 cut(s) 949
NspI RCATGY 1 cut(s) 2417
OliI CACNNNNGTG 2 cut(s) 1436, 1772
PaeI GCATGC 1 cut(s) 2417
PagI TCATGA 3 cut(s) 844, 1119, 1567
PceI AGGCCT 1 cut(s) 1081
PciSI GCTCTTC 1 cut(s) 2434
PctI GAATGC 4 cut(s) 240, 441, 645, 1763
PdmI GAANNNNTTC 2 cut(s) 2110, 2170
PfeI GAWTC 8 cut(s) 113, 176, 358, 519, 1334, 1564, 2263, 2564
PflMI CCANNNNNTGG 1 cut(s) 51
PkrI GCNGC 5 cut(s) 83, 334, 1021, 1279, 2851
PleI GAGTC 3 cut(s) 266, 766, 1513
PpsI GAGTC 3 cut(s) 266, 766, 1513
PshBI ATTAAT 2 cut(s) 525, 1287
Psp124BI GAGCTC 1 cut(s) 1907
Psp6I CCWGG 6 cut(s) 565, 658, 731, 1594, 1723, 2254
PspGI CCWGG 6 cut(s) 565, 658, 731, 1594, 1723, 2254
PspN4I GGNNCC 1 cut(s) 624
PspPI GGNCC 2 cut(s) 2827, 2874
PstNI CAGNNNCTG 2 cut(s) 1601, 1850
PsuI RGATCY 7 cut(s) 1056, 1598, 1741, 1780, 2038, 2135, 2557
PvuII CAGCTG 3 cut(s) 431, 1019, 1280
RsaI GTAC 7 cut(s) 624, 995, 1225, 1591, 1630, 1951, 2374
RsaNI GTAC 7 cut(s) 623, 994, 1224, 1590, 1629, 1950, 2373
RseI CAYNNNNRTG 4 cut(s) 660, 1436, 1527, 1772
SacI GAGCTC 1 cut(s) 1907
SalI GTCGAC 1 cut(s) 855
SapI GCTCTTC 1 cut(s) 2434
SaqAI TTAA 7 cut(s) 27, 101, 273, 525, 1287, 1506, 1689
SatI GCNGC 5 cut(s) 82, 333, 1020, 1278, 2850
Sau96I GGNCC 2 cut(s) 2827, 2874
ScaI AGTACT 1 cut(s) 1225
SchI GAGTC 3 cut(s) 267, 766, 1513
ScrFI CCNGG 7 cut(s) 567, 660, 733, 1596, 1725, 2013, 2256
SduI GDGCHC 3 cut(s) 574, 1907, 2701
SexAI ACCWGGT 1 cut(s) 1723
SfcI CTRYAG 2 cut(s) 303, 2709
SinI GGWCC 1 cut(s) 2827
SmiMI CAYNNNNRTG 4 cut(s) 660, 1436, 1527, 1772
SmlI CTYRAG 2 cut(s) 26, 786
SmoI CTYRAG 2 cut(s) 26, 786
SphI GCATGC 1 cut(s) 2417
SseBI AGGCCT 1 cut(s) 1081
SspI AATATT 2 cut(s) 781, 2745
SspMI CTAG 6 cut(s) 492, 1131, 1365, 1965, 2268, 2561
SstI GAGCTC 1 cut(s) 1907
StuI AGGCCT 1 cut(s) 1081
StyD4I CCNGG 7 cut(s) 565, 658, 731, 1594, 1723, 2011, 2254
TaaI ACNGT 8 cut(s) 445, 652, 854, 1115, 1826, 2111, 2779, 2822
TaiI ACGT 2 cut(s) 534, 2374
TaqI TCGA 6 cut(s) 142, 856, 1220, 1232, 1544, 1877
TatI WGTACW 2 cut(s) 1223, 1628
TfiI GAWTC 8 cut(s) 113, 176, 358, 519, 1334, 1564, 2263, 2564
Tru1I TTAA 7 cut(s) 27, 101, 273, 525, 1287, 1506, 1689
Tru9I TTAA 7 cut(s) 27, 101, 273, 525, 1287, 1506, 1689
TscAI CASTG 6 cut(s) 46, 56, 870, 1473, 2367, 2884
TseFI GTSAC 2 cut(s) 2404, 2523
TseI GCWGC 5 cut(s) 81, 332, 1019, 1277, 2849
Tsp45I GTSAC 2 cut(s) 2404, 2523
TspGWI ACGGA 1 cut(s) 1448
TspRI CASTG 6 cut(s) 46, 56, 870, 1473, 2367, 2884
Van91I CCANNNNNTGG 1 cut(s) 51
Vha464I CTTAAG 1 cut(s) 26
VpaK11BI GGWCC 1 cut(s) 2827
VspI ATTAAT 2 cut(s) 525, 1287
XagI CCTNNNNNAGG 3 cut(s) 888, 1134, 2033
XapI RAATTY 5 cut(s) 828, 840, 1143, 1319, 1584
XbaI TCTAGA 1 cut(s) 2560
XceI RCATGY 1 cut(s) 2417
XcmI CCANNNNNNNNNTGG 3 cut(s) 189, 428, 902
XmiI GTMKAC 1 cut(s) 856
XmnI GAANNNNTTC 2 cut(s) 2110, 2170
XspI CTAG 6 cut(s) 492, 1131, 1365, 1965, 2268, 2561
ZraI GACGTC 1 cut(s) 532
ZrmI AGTACT 1 cut(s) 1225
Zsp2I ATGCAT 1 cut(s) 949
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.